CsGy1G030510 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G030510
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Chr1 : 28813631 .. 28815595 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCCCAACCCAATCTAAAACATGGGACACTCCAAATCTCAACCATAATTTGGATTCTAAAATCTCCCTCTCTTCAACCTCTTAGCTTATCTTATTCTTTCCCATTTCCATTTTATGATTCCTATTTCTAATTCTCAGCTCTCACATCACCACTTCACCAACCCTCTCTCCAAATACAAAGCCTAATATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGGTTGCTTTTCTTTTCCTTTCTTTCTTTTTTATCTATTGTCTTGCGTGTGGGTTGTTGACTCACCAAGTTTAATATGGTTATTATAGTGGAAAGATCTTGTGTTCAATGAGTTTTTCTACTTTTCAAGCTCTGCATCTAAAAGAGTGTTTAGAATGTAAATTTATGTTTCTTTTGTTCTAAATCTATACTATGGTTCTGACGTTTGTTGGTGAAAGACTTGAATTCTTACTTCCATCCATCCTAACAACAAAAACATTTGAGAGCTACTGTCTTTTTAATTTTTGAATTTCAGTTTGGTATTTTAAAACATTTATAGAAAATGGACAACAAAACCAAGAGACGTACAGGTGAAGTAGTAGTTATAAATTATAATTTTAAAACTAAAAAACTAATCGTCACCAGAGTCTTAATTTAGTTTTTGAGTAGTGATTGAGCAGGGGCTCATTATTGAAGAAGGGAGAAATAACTTCTTTCTACTTTCTCCTAGTTCAAATCGTATTCGGGTTAAGTAGTTTAGTTGCAACTTGTGAGATTTATTATTGTTATTATTGCAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGGTATTACAAAAAGTTCTATCACTTCTTATTATTTTTCATATTCTAAGTAACAATAATCTTATCAAATAAAGGTTTAAAATAAACCATCTTCTTAAAGTCAAAAAGCTTTTCTACAAATTTAAACTAAGTTACTGGGTGATAATTTGAATTACTTTGGTGGTTTTGATTTAGTCTGCCAGGCGATTTCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAGAAGGGTTTATATGTGAATTGTAATTTGTGTAATGTATATTAATATGGATCACAATCCCCTTTGGGTTGCTTTGGAGCTTTCAAAAATTGTTTCCCCCCACTCTATTGTAACATGATTTGAGGAAAAACTTTTCTCTAATATTTTGCATCTTCCTGGATCTTTCTAAGAGTATGGACATATATATTACATATTACGTGGATTTAAAAATTGGTATAAGATTCTATAAGATA

mRNA sequence

AGATCCCAACCCAATCTAAAACATGGGACACTCCAAATCTCAACCATAATTTGGATTCTAAAATCTCCCTCTCTTCAACCTCTTAGCTTATCTTATTCTTTCCCATTTCCATTTTATGATTCCTATTTCTAATTCTCAGCTCTCACATCACCACTTCACCAACCCTCTCTCCAAATACAAAGCCTAATATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTGCCAGGCGATTTCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAGAAGGGTTTATATGTGAATTGTAATTTGTGTAATGTATATTAATATGGATCACAATCCCCTTTGGGTTGCTTTGGAGCTTTCAAAAATTGTTTCCCCCCACTCTATTGTAACATGATTTGAGGAAAAACTTTTCTCTAATATTTTGCATCTTCCTGGATCTTTCTAAGAGTATGGACATATATATTACATATTACGTGGATTTAAAAATTGGTATAAGATTCTATAAGATA

Coding sequence (CDS)

ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTGCCAGGCGATTTCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG

Protein sequence

MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Homology

[Close]

BLAST of CsGy1G030510 vs. NCBI nr
Match: XP_004139075.1 (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus] >KGN66578.1 Type III chlorophyll a/b-binding protein [Cucumis sativus])

HSP 1 Score: 554.7 bits (1428), Expect = 1.8e-154
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK
Sbjct: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF
Sbjct: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM
Sbjct: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. NCBI nr
Match: XP_008450298.1 (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo])

HSP 1 Score: 545.8 bits (1405), Expect = 8.3e-152
Identity = 267/273 (97.80%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MATQALVSSSLTSSVGAARQRLGA+PSFGSSRKSASFVVRA ATPPVKQGADRQLWFASK
Sbjct: 1   MATQALVSSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAGATPPVKQGADRQLWFASK 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEIF
Sbjct: 61  QSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIF 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSM
Sbjct: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           IQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 241 IQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. NCBI nr
Match: XP_022933380.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata])

HSP 1 Score: 535.0 bits (1377), Expect = 1.5e-148
Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]

BLAST of CsGy1G030510 vs. NCBI nr
Match: XP_022153224.1 (photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Momordica charantia])

HSP 1 Score: 532.3 bits (1370), Expect = 9.4e-148
Identity = 257/273 (94.14%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MATQALVSSSLTSSVGAAR R GARPSFGSSRKSASFVVRAEATPPVKQGA+RQLWFASK
Sbjct: 1   MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASK 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLG  GAIAPEI 
Sbjct: 61  QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGVVGAIAPEIL 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSM
Sbjct: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEKFLGGSG+PAYPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F
Sbjct: 181 GKQYFLGLEKFLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           +QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 VQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. NCBI nr
Match: XP_023006167.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima] >XP_023531157.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 1.6e-147
Identity = 262/274 (95.62%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]

BLAST of CsGy1G030510 vs. TAIR10
Match: AT1G61520.1 (photosystem I light harvesting complex gene 3)

HSP 1 Score: 479.9 bits (1234), Expect = 1.0e-135
Identity = 234/273 (85.71%), Postives = 248/273 (90.84%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MA QALVSSSLTSSV  ARQ  G++P   +S+K +SFVV+A ATPPVKQGA+R LWFAS 
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFASS 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI 
Sbjct: 61  QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEIL 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSM
Sbjct: 121 GKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           IQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 IQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. TAIR10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44
Identity = 105/262 (40.08%), Postives = 147/262 (56.11%), Query Frame = 0


Query: 21  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPG 80
           R G    F   R+ AS V+    +     G         +R  W        YLDG+L G
Sbjct: 6   RGGITGGFLHHRRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAG 65

Query: 81  DFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETA 140
           D+GFDPLGL  DPE        +W    E+++ RFAMLG AG +  ++  + G+      
Sbjct: 66  DYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGVAGILFTDLLRTTGI----RN 125

Query: 141 LP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGL 200
           LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GL
Sbjct: 126 LPVWYEAGAV----KFDF-ASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGL 185

Query: 201 EKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGV 260
           E  L G  +P YPGGPL NPLG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  
Sbjct: 186 EAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHT 245

Query: 261 GPYQNLLDHLSDPVNNNVLTSL 271
           GP  NL++HLS+P +  ++ +L
Sbjct: 246 GPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of CsGy1G030510 vs. TAIR10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2)

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-43
Identity = 112/263 (42.59%), Postives = 149/263 (56.65%), Query Frame = 0


Query: 2   ATQALVSSSLTSSVGAARQRLGARPSFGS-SRKSASFVVRAEATPPVKQGADRQLWFASK 61
           A+ A+ + S  S +G  + RL  + +  + SR  AS  VRA A  P     DR +WF   
Sbjct: 7   ASSAIAAISSPSFLGGKKLRLKKKLTVPAVSRPDAS--VRAVAADP-----DRPIWFPGS 66

Query: 62  QSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 121
               +LDGSLPGDFGFDPLGL SDP+        +W    E+++ R+AMLGAAG   PE 
Sbjct: 67  TPPEWLDGSLPGDFGFDPLGLSSDPDSL------KWNVQAEIVHCRWAMLGAAGIFIPEF 126

Query: 122 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 181
              +G++   +   W+       AG   Y+ D  TLFV E+ L+G+AE RR+ D  KPGS
Sbjct: 127 LTKIGILNTPS---WY------TAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGS 186

Query: 182 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS-MKELKLKEIKNGRLAMLAILG 241
           +         K  G   D  YPGG  F+PLG+G    + +KEL+ KEIKNGRLAMLA++G
Sbjct: 187 VNTDPVFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMG 245

Query: 242 YFIQGLVTGVGPYQNLLDHLSDP 262
            + Q + TG GP  NL  HL+DP
Sbjct: 247 AWFQHIYTGTGPIDNLFAHLADP 245

[Close]

BLAST of CsGy1G030510 vs. TAIR10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4)

HSP 1 Score: 164.9 bits (416), Expect = 7.2e-41
Identity = 115/264 (43.56%), Postives = 145/264 (54.92%), Query Frame = 0


Query: 11  LTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSL 70
           LT S G   + L +  S GSS K++SF V A      K+G     W     S  YL GSL
Sbjct: 23  LTGSSGRLNRDL-SFTSIGSSAKTSSFKVEA------KKGE----WLPGLASPDYLTGSL 82

Query: 71  PGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLI-PP 130
            GD GFDPLGL+ DPE        +W    E++NGR+AMLG AG + PE+F  +G+I  P
Sbjct: 83  AGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVP 142

Query: 131 ETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMG-----KQ 190
           E    W+       AG   Y+A   TLFV E  L  + E RR+QD   PGS+      KQ
Sbjct: 143 E----WY------DAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQ 202

Query: 191 YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQG 250
           Y L         G+  YPGG +FNPL F   +    E K KE+ NGRLAMLA LG+ +Q 
Sbjct: 203 YSL-------PKGEVGYPGG-IFNPLNFAPTQ----EAKEKELANGRLAMLAFLGFVVQH 247

Query: 251 LVTGVGPYQNLLDHLSDPVNNNVL 268
            VTG GP++NLL HLSDP +N ++
Sbjct: 263 NVTGKGPFENLLQHLSDPWHNTIV 247

[Close]

BLAST of CsGy1G030510 vs. TAIR10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6)

HSP 1 Score: 154.8 bits (390), Expect = 7.4e-38
Identity = 112/292 (38.36%), Postives = 149/292 (51.03%), Query Frame = 0


Query: 2   ATQALVSSSLTSSVGAARQRLGARPSFGSSRKSAS-------FVVRA--------EATPP 61
           A  + ++S+LT S    +     RP   S+  +          VVRA        E  PP
Sbjct: 4   AIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPP 63

Query: 62  VKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGR 121
                DR LWF       +LDGSLPGDFGFDPLGL SDP+        +W A  E+I+ R
Sbjct: 64  -----DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTL------KWFAQAELIHSR 123

Query: 122 FAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGF 181
           +AML   G I PE    LG I       W+       AG+  Y+AD  TLFV +M LMG+
Sbjct: 124 WAMLAVTGIIIPECLERLGFI---ENFSWY------DAGSREYFADSTTLFVAQMVLMGW 183

Query: 182 AEHRRFQDWAKPGSMGKQYFLGLEKF---LGGSGDPAYPGGPLFNPLGFGK-DEKSMKEL 241
           AE RR+ D  KPGS+  +      K+   +    D  YPGG  F+ + +G+   + +  L
Sbjct: 184 AEGRRWADLIKPGSVDIE-----PKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVL 243

Query: 242 KLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           + KEIKNGRLAMLA LG+  Q   T   P +NL+ HL+DP + NV ++   H
Sbjct: 244 RTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTSH 270

[Close]

BLAST of CsGy1G030510 vs. Swiss-Prot
Match: sp|P27522|CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB8 PE=3 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.1e-135
Identity = 242/274 (88.32%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 1   MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFAS 60
           MATQAL+ SSS+++S  AARQ +G+R S   +RK ASFVVRA +TPPVKQGA+RQLWFAS
Sbjct: 1   MATQALISSSSISTSAEAARQIIGSRISQSVTRK-ASFVVRAASTPPVKQGANRQLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLSYLDG LPGDFGFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180
            G  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKPGS
Sbjct: 121 LGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEK LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           FIQ LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 FIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. Swiss-Prot
Match: sp|Q9SY97|LHCA3_ARATH (Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA3 PE=1 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 1.8e-134
Identity = 234/273 (85.71%), Postives = 248/273 (90.84%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MA QALVSSSLTSSV  ARQ  G++P   +S+K +SFVV+A ATPPVKQGA+R LWFAS 
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFASS 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI 
Sbjct: 61  QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEIL 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW  PGSM
Sbjct: 121 GKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           IQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 IQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. Swiss-Prot
Match: sp|Q32904|CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhca3 PE=1 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 8.7e-129
Identity = 235/278 (84.53%), Postives = 245/278 (88.13%), Query Frame = 0


Query: 1   MATQALV-SSSLTSSVGAARQRLGAR---PSFGSSRKSASFVVRAEATPPVKQ-GADRQL 60
           MATQALV SSSLT +  A RQ   AR    S G SRK    +VRA ATPPVKQ G DR L
Sbjct: 1   MATQALVSSSSLTFAAEAVRQSFRARSLPSSVGCSRKG---LVRAAATPPVKQGGVDRPL 60

Query: 61  WFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAI 120
           WFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGA GAI
Sbjct: 61  WFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAI 120

Query: 121 APEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA 180
           APE  G +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWA
Sbjct: 121 APEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWA 180

Query: 181 KPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLA 240
           KPGSMGKQYFLGLEK  GGSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLA
Sbjct: 181 KPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLA 240

Query: 241 ILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           ILGYFIQGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Sbjct: 241 ILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275

[Close]

BLAST of CsGy1G030510 vs. Swiss-Prot
Match: sp|Q9C639|LHCA5_ARATH (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-43
Identity = 105/262 (40.08%), Postives = 147/262 (56.11%), Query Frame = 0


Query: 21  RLGARPSFGSSRKSASFVVRAEATPPVKQG--------ADRQLWFASKQSLSYLDGSLPG 80
           R G    F   R+ AS V+    +     G         +R  W        YLDG+L G
Sbjct: 6   RGGITGGFLHHRRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAG 65

Query: 81  DFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETA 140
           D+GFDPLGL  DPE        +W    E+++ RFAMLG AG +  ++  + G+      
Sbjct: 66  DYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGVAGILFTDLLRTTGI----RN 125

Query: 141 LP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ--YFLGL 200
           LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+  PGS  K+  +F GL
Sbjct: 126 LPVWYEAGAV----KFDF-ASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGL 185

Query: 201 EKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGV 260
           E  L G  +P YPGGPL NPLG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  
Sbjct: 186 EAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHT 245

Query: 261 GPYQNLLDHLSDPVNNNVLTSL 271
           GP  NL++HLS+P +  ++ +L
Sbjct: 246 GPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of CsGy1G030510 vs. Swiss-Prot
Match: sp|P13869|CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-42
Identity = 110/259 (42.47%), Postives = 144/259 (55.60%), Query Frame = 0


Query: 5   ALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLS 64
           ++V ++  S +G  R R+     F +   S S  V A A  P     DR LWF       
Sbjct: 25  SIVGATKASFLGGKRLRVS---KFIAPVGSRSVAVSAVAADP-----DRPLWFPGSTPPE 84

Query: 65  YLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSL 124
           +LDGSLPGDFGFDPLGL SDPE        +W A  E+++ R+AMLGAAG   PE    +
Sbjct: 85  WLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKI 144

Query: 125 GLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQ 184
           G++   +   W+       AG   Y+ D  TLFV E+ L+G+AE RR+ D  KPG +   
Sbjct: 145 GVLNTPS---WY------TAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTD 204

Query: 185 YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS-MKELKLKEIKNGRLAMLAILGYFIQ 244
                 K  G   D  YPGG  F+PLG+G    + +KEL+ KEIKNGRLAMLA++G + Q
Sbjct: 205 PIFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 258

Query: 245 GLVTGVGPYQNLLDHLSDP 262
            + TG GP  NL  HL+DP
Sbjct: 265 HIYTGTGPIDNLFAHLADP 258

[Close]

BLAST of CsGy1G030510 vs. TrEMBL
Match: tr|A0A0A0LXV0|A0A0A0LXV0_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G630330 PE=3 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.2e-154
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK
Sbjct: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF
Sbjct: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM
Sbjct: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. TrEMBL
Match: tr|A0A1S3BPK7|A0A1S3BPK7_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491949 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 5.5e-152
Identity = 267/273 (97.80%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MATQALVSSSLTSSVGAARQRLGA+PSFGSSRKSASFVVRA ATPPVKQGADRQLWFASK
Sbjct: 1   MATQALVSSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAGATPPVKQGADRQLWFASK 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEIF
Sbjct: 61  QSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIF 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWAKPGSM
Sbjct: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           IQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 241 IQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. TrEMBL
Match: tr|B9SEZ7|B9SEZ7_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_1211480 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 5.9e-146
Identity = 255/273 (93.41%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASK 60
           MATQALVSSSLTSSV  ARQ LGAR SFGSSRKS+SFVVRA +TPPVKQGADRQLWFASK
Sbjct: 1   MATQALVSSSLTSSVETARQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASK 60

Query: 61  QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIF 120
           QSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE+INGRFAMLGAAGAIAPEI 
Sbjct: 61  QSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEIL 120

Query: 121 GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180
           G  GLIPPETALPWF+TGVIPPAGTY+YWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM
Sbjct: 121 GKAGLIPPETALPWFQTGVIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSM 180

Query: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
           GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAILGYF
Sbjct: 181 GKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYF 240

Query: 241 IQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           +QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 VQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. TrEMBL
Match: tr|A0A2P5DGC6|A0A2P5DGC6_PARAD (Chlorophyll a-b binding protein, chloroplastic OS=Parasponia andersonii OX=3476 GN=PanWU01x14_067310 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 1.1e-141
Identity = 253/274 (92.34%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFAS 60
           MATQALV SSSLTSSV AARQ LG RP+  S+R+S+SFVVRA +TPPVKQGADR LWFAS
Sbjct: 1   MATQALVSSSSLTSSVEAARQILGRRPT-QSTRRSSSFVVRAASTPPVKQGADRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180
           FG LGLIP ETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS
Sbjct: 121 FGKLGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           F+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]

BLAST of CsGy1G030510 vs. TrEMBL
Match: tr|A0A2C9UR67|A0A2C9UR67_MANES (Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=MANES_13G058600 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 3.3e-141
Identity = 253/276 (91.67%), Postives = 261/276 (94.57%), Query Frame = 0


Query: 1   MATQALVSSSLTSSVGAARQRLGARP---SFGSSRKSASFVVRAEATPPVKQGADRQLWF 60
           MATQALVSSSLTSSV  ARQ LGARP   SFGSSRKS SFVVRA +TPPVKQGADRQLWF
Sbjct: 1   MATQALVSSSLTSSVETARQILGARPSQSSFGSSRKS-SFVVRASSTPPVKQGADRQLWF 60

Query: 61  ASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAP 120
           ASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGA GAIAP
Sbjct: 61  ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 120

Query: 121 EIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKP 180
           EI G  GLIP ETALPWFKTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWA P
Sbjct: 121 EILGKAGLIPAETALPWFKTGVIPPAGTYDYWADPYTLFVLEMALMGFAEHRRFQDWANP 180

Query: 181 GSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAIL 240
           GSMGKQYFLGLEK+LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKE+KNGRLAMLAIL
Sbjct: 181 GSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAIL 240

Query: 241 GYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
           GYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 GYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 275

The following BLAST results are available for this feature:

BLAST of CsGy1G030510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139075.1	1.8e-154	100.00	PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus] >K...	[more]
XP_008450298.1	8.3e-152	97.80	PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo]	[more]
XP_022933380.1	1.5e-148	96.35	chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata]	[more]
XP_022153224.1	9.4e-148	94.14	photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Momordica char...	[more]
XP_023006167.1	1.6e-147	95.62	chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima] >XP_02353115...	[more]

BLAST of CsGy1G030510 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G61520.1	1.0e-135	85.71	photosystem I light harvesting complex gene 3	[more]
AT1G45474.1	1.8e-44	40.08	photosystem I light harvesting complex gene 5	[more]
AT3G61470.1	2.0e-43	42.59	photosystem I light harvesting complex gene 2	[more]
AT3G47470.1	7.2e-41	43.56	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT1G19150.1	7.4e-38	38.36	photosystem I light harvesting complex gene 6	[more]

BLAST of CsGy1G030510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P27522\|CB13_SOLLC	2.1e-135	88.32	Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
sp\|Q9SY97\|LHCA3_ARATH	1.8e-134	85.71	Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis ...	[more]
sp\|Q32904\|CB23_PEA	8.7e-129	84.53	Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhc...	[more]
sp\|Q9C639\|LHCA5_ARATH	3.3e-43	40.08	Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th...	[more]
sp\|P13869\|CB12_PETHY	2.1e-42	42.47	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]

BLAST of CsGy1G030510 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXV0\|A0A0A0LXV0_CUCSA	1.2e-154	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A1S3BPK7\|A0A1S3BPK7_CUCME	5.5e-152	97.80	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|B9SEZ7\|B9SEZ7_RICCO	5.9e-146	93.41	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RC...	[more]
tr\|A0A2P5DGC6\|A0A2P5DGC6_PARAD	1.1e-141	92.34	Chlorophyll a-b binding protein, chloroplastic OS=Parasponia andersonii OX=3476 ...	[more]
tr\|A0A2C9UR67\|A0A2C9UR67_MANES	3.3e-141	91.67	Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=M...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G030510.1	CsGy1G030510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 64..242 e-value: 1.5E-46 score: 158.8
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	G3DSA:1.10.3460.10		coord: 82..253 e-value: 1.5E-74 score: 252.0
None	No IPR available	PANTHER	PTHR21649:SF14	PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 3-1, CHLOROPLASTIC	coord: 1..273
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 52..269
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..273

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G030510	Cla001764	Watermelon (97103) v1	cgybwmB018
CsGy1G030510	Csa1G630330	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G030510	MELO3C015076	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G030510	ClCG03G012070	Watermelon (Charleston Gray)	cgybwcgB041
CsGy1G030510	CSPI01G31340	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G030510	CmaCh11G009010	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G030510	CmoCh11G009160	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G030510	CmoCh10G009080	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G030510	Lsi06G006340	Bottle gourd (USVL1VR-Ls)	cgyblsiB072
CsGy1G030510	Cp4.1LG04g12530	Cucurbita pepo (Zucchini)	cgybcpeB125
CsGy1G030510	Cp4.1LG18g02160	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G030510	MELO3C015076.2	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G030510	CsaV3_1G043710	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G030510	Cla97C03G062230	Watermelon (97103) v2	cgybwmbB046
CsGy1G030510	Bhi02G001201	Wax gourd	cgybwgoB094
CsGy1G030510	Carg22685	Silver-seed gourd	carcgybB0542
CsGy1G030510	Carg17836	Silver-seed gourd	carcgybB0955

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G030510	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G030510	Cucurbita maxima (Rimu)	cgybcmaB120
CsGy1G030510	Cucurbita moschata (Rifu)	cgybcmoB110
CsGy1G030510	Cucurbita pepo (Zucchini)	cgybcpeB137
CsGy1G030510	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G030510	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G030510	Silver-seed gourd	carcgybB0905
CsGy1G030510	Watermelon (97103) v2	cgybwmbB039
CsGy1G030510	Watermelon (97103) v2	cgybwmbB041