CsGy1G020980 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G020980
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Chr1 : 19677048 .. 19685140 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAAATAACATTCCTTTTCTTCATTAAAATTAGCTTATTCTTGCTTGCAATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTAACTAATAATTAAAAGCAAAGCTTTTCATATTCTTTAATAAGACTTTTTATACATGTAATCTCGTTAAGTCAAGTATTTTGTTTTCATTTTCTCTTTCAAAATTTAGTTCCTAAATATTTATTCTTTTACGTTGTTATCTTTTTTTGAGATCAAAATTTGAATTTTTTTTGTACTTGAAAATTAAATTTAGAGGATGATTTCTTCTTTTAAGAGTTTTTTTTTTTTTTTAATCTACTCTCTAAACAATACTATTTTCTAAATTTGTTTAAGTTTCTTAAACTAAAAAAATAATATTATTTTTAAAAACTTACTTTTTATTTTGAAATTTGACTCGCAGAGTTTAAATTCTATTTTGAAAAATACAAAATTTATAAGAAAATATACAGAAACTTTAAAGTCTAAACTATTCAAAGGGAGTGTTTAGATATACAAAAACTCAAATTGAGTTTGATTTGAACTTAATTCTTGGGTTTCAAACAAATAAATTAGATGATGTTTCCCTTGTTGACTTGGTGGTTTGCTTCAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGAGTCAAATAATGTAGCATCATCTGCTTCAATCACTTCCCCATTCAACTAATTTGAGTGTGAAATGGAATAATGAAAGAAATCTTGCATTGTAATATTTCAATTCAAATTAAATGAGACTGTGTTTTGAGTCTATTTGTGCAATTTTCCCTGAACACTATATATATGCACATAAATTTGGCGCCAAATTTTCTTCAGAGCTTTGCCTCTCACTCATTGGAAACATTGCCGCAGCTTCATGGGTGAAAAAATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTAAATCCCAATTTCAATTCCATTTCCCCTGTTTTTCTCCCTCGTTTTCCTTCAATTGATTCACAACACAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCTTCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCCTACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATCGATCGTGGTCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAGAAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAGGTAATAATTCCACTTCAGTTATCTCTTTTGTTTTGTACATATTTATTTTTTATTTCATAAGCATGAGCAGTTGAATCGAAGCTTTGATTTCCTGTCTGGGTCAATAATGGCCACTATTAGTTCTATTCTGATAGACCTCCTACCATATACCAATATTGTAGAAGAAATAATGAAGAGTTAGTTAGGTTGTTAGTCAAGCTGTTAGTTAGGTAGTTGAGAAATTAGTTAATACGGTTAGTATAAATAAATGCTAAGAAAGAGGGAAGGGTGTGGAATTTGTAAGTGAGGGAGAGAGACAGGCTTCTGTGCATCTTTGAAAGACAAGATAACGGGAGAGTGAGTTCTGAATTGAGACATTCTCAATTCGGCTATTGATTCCTTTGTGTAAGAACAGTTACTAAATACTATCAATAAAGTTTACCTTAATATCAAGTATGGATTCCATCATATTGGTATCAGAGCACGTACATCCTGGGCAAGCGACAAAAAGATGATGAAACATATAGAGGAATGGTTTGAAACCATGGAGCAGGAGATCGCGAGTATGAAAATCGATCTACAACGATTATCAGAACTCGAAGCCAAGATGACGAAACATATGGAGAAGATCGATGTACAAAATGAACTAAACACACAGCAACAACAAAATTTTTTGAAATATATCGAGAGCATGATGAAGGATCCATCCTCATCAACATCGGAATCGGAAAAGGCGTCTAGTAAAATGAAAGCGAAGGTATACGAATCGAATGAAGAACCAAACTCAAGTGAGAAGGAGGAAAGCGATAAGAATAGTGTTCGAAGTAAATTCAAGAAGGTAGAAATGCCCGTGTTCAATGGCGAAGACCTAGACTCCTGGCTGTTTCGTGGCAATTGGTACTTCCAGATTCATAAGCTAATAGACTCCGAAAAAATGACGGTTGCGACGATCAGCTTCGACGGACCAGCTTTGAATTGGTATAGAGCCCAAGAAGAGCGGGAGAAATTCACGGGATGGTCGAACCTAAAGGAAAGATTATTGGTGCGATTTCGATCAGCAAGGGAGGGATCGATATGCGGCCAATTCCTGAGGATCAGATAAGAAACCACAGTAGAAGAGTATTGGAACCTGTTTGACAAACTAATGGCGCCATTATCAGGCCTGGAAGATCAAGTGGTTGAACAGACCTTCCTAAATGGGTTGTTACCATGGATCAAGGCAGAAGTTGAATTCGGCCGGCCGATTGGTTTAGCCTAAATGATGCAATTAGCGCAACTCGTGGAGAATCGGGAGATCATTTGTAATGTGGCCAATATCAAAGGATACGCAAGAGGTAATTCCTACTACTCCAATCTTTTTAAATCCAATCTGGGGCGGGAATGAGTAATAATGAGAACAAAGGTAATAACACGTGGCCTATGAGAACAACCACACGGAGAGAAGTGGGGACTGGAGAGGTAAAAAAATAAGGGCCATCAAAGAGGTTGAGTGATGCGGAGTTCCAAACCAGGAAGGAGAAAGACCTATGCTGATGGAACTCCAATTGGTAATTAAGTAAGAAATCTCTTATTAATCCGTATCTAGAAATGAATACAAGGATTCAAATTGATAATCCCTCAATTCGGAAAACTCTCCCTATTATGCCTTCCTCTCTCTCAAGGAATTGCAAGGATATCTCAAACCACTTTCTAAATAACTTTCTCTCTTCCTAACGTTTCTCTACTTATACTTATAGACTTACAAAATGACAACTCATTATTTACTCATACTAACAAACTTACAAAACGACAGCTAATCACTTTTAATTTCCGTTTTCTTCACTCGTGTGAACTGTTGTGGTCCCCTCCCCTTTCTTCTCGTTCCTTCTACTATACTTATGTATAATTGGTGGTCTATCATATGCTTTCACGGTAATGAAAAATTTTCCCATGGCCACAAGTGTAAGGTGAGGGAGCAAAGAGAACTCAGAATGTTTGTAGTCAAAAGCGATGATGAAGAATGGGAGATTCTGGAAGACTTGGGGGATACAAAAAAGGAGCTGAACATGGTAGAAGTGGTAGAAGATGACCAGACGGTCATAGAACTATCCATCAACTCGGTTGTGGGGTTATCTAACCCGGGCACTATGAAGGTCAAGGGAAAAATTAAAGAAAGAGAAGTAGTGATCCTGATTGACTGTAGGGCTACCCACAACTTCATTTCTACTAACGTGGTAGAGGAATTGCAGCTTACAACCAAAGATACCTCACACTATGGAGTCATTTTGGGATCCGACACAACAGTGAAAGGTAAGGGAGCCTGTGAGGCAGTGGAAGGTGAAATTGAGCAGATGGAAGATAGTGGCCAATTTCTTACTGTTGGAGCTAGGAGGAGTAGAGGTCGTATCGGGGATGCAATGGTTATACTCGTTAGGCATCATTGAAGTGGACTGGAGAAATTTAACTTTGACATTCACCCATCAAGGTAAAATGGTAATCATCAAGGAGACCCCAGCTTAACTAAGTTAAGAATCAACTTGAAGAAAATGATGAAAACATGGGATAGTTCCAATCAAGGATTCTTGATCGAATGCCGCGCCATGGAAAGAAGGCTAATAACAAAGAAGAAGATGATCTTGAAGAAGTAGTAACAGTGGAAGAATCGGTAGCTATAGTCCTGAAGAAATATGAAGATGTGCTCACATGGCTTGAGAAACTACCACCAAGAAGAGAAATTGAGCACCACATCCATAAAAAAAAGACACTGACCCATTTAATGTAAGGCCATACCGCTATGCATACCAACAGAAGACTGAGATAGAGAAGCTTGTGGAGGAGATGTTAACTTTAGGGGTAATAGGACCAAGCAATAGCCCGTATTCTAGCCTAGTACTATTAGTAAGAAAGAAAGATGGGAGCTGGCAATTCTGCGTTGACTATAGAGCACTGAATAACGTAATTGTTCGTGATATATAATTAAATTTACTTTCAACCACAAGCTTAAGCTTTTGGATGAATTGGTGGTTTAATAGTAACAATACCGGACAAGTTTCCCATTCCCGTCATTGAAGAATTGTTTGATGAATTGAATGGAGCATCGTGGTTCTCGAAAATCAATCTGAAGGAGAGATACCAACAAATCTGTATGTGTGAAGAAGATATTGAAAAAACAGCCTTCTTTACCCATGAAGGCCACTATGAATTCATGGTTATGCCGTTTGGATTAACCAACGCACCATCAACCTTCCAGTCCCTGGTGAATTCAATATTTAAACCGTACTTGAGGAGATTCGTATTGGTGTTTTTTTGACGATATCTTGATCTAAAGTAGGGACTTAGAAACACACCTACGACACTTCTCTGATACCAATATGATGGAAACCGTATGTATTAAGAAATGATCTTTATTGATAGTAACTGCTCATCCTCATTACACATATGAATTCTACCCTCCTGAATCTTATCTCTCAAAGATGTCAGAAGTCTTCCTCTCTGTTTTATTACAAAACTCTCTTCCTCTTTCTTTCTTAGCTTCTTTCTTTTATTACCGTAGCATTAACGGTTTTAACTAACTTTCACACTTTCTGTTTAACTGTTATAGTGTAATAATAACAGTTAAACTGTTTCAGTCTAACTACTAACTTTCTTTCTTCTACTATATTGGTATGTTATGGGGGGTCTTTCACAACGATATCCCCAGTTTCACCTTGAGAACAAGATGAATTTGGAGGAGTGTAATGATAGACCCCCTATCATACACCAATATAGTGGAAGAAAGAAGAGTTAGTTAGGCTGTTAGTCAAGTCGTTAGTCAGGTAGTTGAGAAATTAGTTAATACTATTAGTATAAATAAATGCTAAGAAAGAGGGAAGGGTGTGGAATTTGTAAGTGAGGTAGAGAGATAGGCTTTTGCACATCTTTGGAAGACAAGATAACAGGAGAGTGAGTTCCGAATTGAGACATTCTCAATTCGGCTATTGATTCCTTTGTGTAAGAACAGTTACTAAATACTATCAATAAAGTTTACCTTAATATCAAGTACGGATTCCATCATATTCTCAAATGAGTTTCAAGAGATATTTGTAGTGATTTTTCTTTAAAATGGTTGGTTTATCTCTCGCTGGTCACAGGGTTTGTAGTGATATAATCCTTGAGTTGCTCTTCTATTCGCCCTTTCATGAGAATGATCATTTTTTCTGGCTTGCGGGTGCGTGTTATTTTGTGAGATCATTAAGGCGAGCAGAATAATCTGAGTGTTCAAAGGGTTGAAAATGAATCTTAGTAGTATTTGTTCACTTATTAGGTTTCATTACTTTAAACTTCGATTTGGCGGACATTTTAATTACTCTTTATATTTGTTAGATACTATATTAAATTTGTCTCTACTCATCGGTTTATGCTTTTGGGTTAGTTGGTGATTTAAGATGGTAGGTTAGATATTATATTATGTCTCCACCTATTAGCTTAAGCTTTTGGGTCGGTTGGTGATTTAAGATTGTATCAGAGCATGTGGTCCAGGAAGATTCTGTGTTCAAACTTCTGTATTGTTGTTTCCTCTCCAATTGATGTTAATTTTCACTTGTTGGACCTTTCTTCATATTCCAAGTCCACCGGTGAGGGGCGTTAAGCTTTTGGGTGGACTGATTTAAGAAGGTTCTATCTTGGAATCCTTTTAAATGCTCAACTGAATCCCTGCTTCCTGCATCATTGTTTTACACCTACTTCTACTCTTGATACTGCCATGTAATCAGAGCAAGTAACTATAGTTCGTGGAGTTGTGCTATGATGATGGAAAATTCTGGAAAGATCAAGTCAGGACCAAATGCAGAAGGTAATCTTCTTTTGGCTTGAGCTTGTAACAATGATATCATTGCGTTGTGGATCTTGAATTCATTTTCAAAAGAGCTTAGCCACAACCCACGCTAATTCAACGAGTGTCAATCCATTGGCTTTTATAAGCCACCTTTGGAGAAAGGTTCTTAAACTCTGGAACATGGTTTTTCAGATGGTAGAAAGGTATAGGTTGGATGGAAATTCGAATGGAAATATGATTTTGGACGTACTTTTGAGGAAGAATAAACTGATTTTGAAGATGTGGTTGGATATTGGGCATAAATATTTGCATACTTGGAAAGACATTCTTTGTTTTTGTTTTTATTTATTTTTTCTTTCTTTGTAATGATCCATATATGTTGAAACTGCATAGATTATTTAAATTATTCCTTCTATGATCATCCAGATGAATTGAATTTCATTGAATTTGTGAACTTCGGCAGGAAAATGGGAAGGCATGGCTGAAAATTTCTGGTTTCAACCTGAGATGAAAGTCATGAACAAGCTTCAACACCAGAGCTCAAAAAGAATCGCTTCAACCAAAAGCATGTTAACTGTCACTTGATCAGGATTAAAACTAGCTGCTAAAGCAGAGGAACATATGGTTTTGGATTGGCCCAAAGCTGCATCAAAGAAAATAAAAATAAATAAATAAATAAAGGCTAAAATTGAACTGATTGGTAAGCCGAATTTAGATGTATAAATGGCTGTTTCTTTCTTCCTTTTTACATTTTGATTCAATTGATAGTAATAATATTATACAAACGCATGCTTAATGAGATGCTACATAGTACATACATAACACACCGTTGCCCGGAAAGAATTGAAAAGAAAAAAATTGACAGCTGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGC

mRNA sequence

ATACAAATAACATTCCTTTTCTTCATTAAAATTAGCTTATTCTTGCTTGCAATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGAGTCAAATAATGTAGCATCATCTGCTTCAATCACTTCCCCATTCAACTAATTTGAGTGTGAAATGGAATAATGAAAGAAATCTTGCATTGTAATATTTCAATTCAAATTAAATGAGACTGTGTTTTGAGTCTATTTGTGCAATTTTCCCTGAACACTATATATATGCACATAAATTTGGCGCCAAATTTTCTTCAGAGCTTTGCCTCTCACTCATTGGAAACATTGCCGCAGCTTCATGGGTGAAAAAATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCTTCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCCTACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATCGATCGTGGTCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAGAAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAGGAAAATGGGAAGGCATGGCTGAAAATTTCTGGTTTCAACCTGAGATGAAAGTCATGAACAAGCTTCAACACCAGAGCTCAAAAAGAATCGCTTCAACCAAAAGCATGTTAACTGTCACTTGATCAGGATTAAAACTAGCTGCTAAAGCAGAGGAACATATGGTTTTGGATTGGCCCAAAGCTGCATCAAAGAAAATAAAAATAAATAAATAAATAAAGGCTAAAATTGAACTGATTGGTAAGCCGAATTTAGATGTATAAATGGCTGTTTCTTTCTTCCTTTTTACATTTTGATTCAATTGATAGTAATAATATTATACAAACGCATGCTTAATGAGATGCTACATAGTACATACATAACACACCGTTGCCCGGAAAGAATTGAAAAGAAAAAAATTGACAGCTGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGC

Coding sequence (CDS)

ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAAATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCCCGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTGGGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGGAAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGGTGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCTATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA

Protein sequence

MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_004147416.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN65549.1 Chlorophyll A/B binding protein [Cucumis sativus])

HSP 1 Score: 542.7 bits (1397), Expect = 6.8e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHLTDPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_008444193.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 1.2e-147
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_022142169.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 523.9 bits (1348), Expect = 3.3e-145
Identity = 254/265 (95.85%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_022139935.1 (chlorophyll a-b binding protein 3, chloroplastic-like [Momordica charantia])

HSP 1 Score: 521.9 bits (1343), Expect = 1.2e-144
Identity = 253/264 (95.83%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGP
Sbjct: 26  MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 85

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 86  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 145

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 146 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 205

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 206 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 265

Query: 241 NLADHLTDPVNNNAWAYATNFVPG 265
           NLADHL DPVNNNAWAYATNFVPG
Sbjct: 266 NLADHLADPVNNNAWAYATNFVPG 289

[Close]

BLAST of CsGy1G020980 vs. NCBI nr
Match: XP_023001458.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 521.9 bits (1343), Expect = 1.2e-144
Identity = 255/265 (96.23%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSS EL GN RV+MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSELVGNGRVSMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. TAIR10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.6e-136
Identity = 230/266 (86.47%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSP+  GK VKL+P++ E+FG  R+TMRK++  +  SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLTDPVNNNAWAYATNFVPGK 266
           ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of CsGy1G020980 vs. TAIR10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 478.0 bits (1229), Expect = 3.7e-135
Identity = 231/267 (86.52%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAAS+MALSSP+FAGK VKL+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           +ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TAIR10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 476.1 bits (1224), Expect = 1.4e-134
Identity = 230/267 (86.14%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAAS+MALSSP+FAGK V L+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           +ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TAIR10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 476.1 bits (1224), Expect = 1.4e-134
Identity = 230/267 (86.14%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MAAS+MALSSP+FAGK V L+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           +ENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TAIR10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 473.0 bits (1216), Expect = 1.2e-133
Identity = 230/267 (86.14%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLG 60
           MA+S+MALSSP+FAGK VK  P++ ++ G+ RVTMRK+  K    SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           LENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. Swiss-Prot
Match: sp|P09756|CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.8e-142
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 2   AASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPF 61
           AASSMALSSPS AGK VKL PS+PE+    RV+MRK+ TK VSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLTDPVNNNAWAYATNFVPGK 266
           LADHL  PVNNNAWAYATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of CsGy1G020980 vs. Swiss-Prot
Match: sp|P27495|CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 8.7e-142
Identity = 243/267 (91.01%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSAT--KSVSSGSPWYGPDRVKYL 60
           MAAS+MALSSPSFAGK VKL+PSS E+ GN +VTMRK+A+  K+VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           LENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. Swiss-Prot
Match: sp|P08221|CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-141
Identity = 238/255 (93.33%), Postives = 249/255 (97.65%), Query Frame = 0


Query: 11  PSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           P+ AG+ VKL+P++PE+ GN++ TMRK+A+KSVSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYP 190
           FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWAYATNFVPGK 266
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of CsGy1G020980 vs. Swiss-Prot
Match: sp|P27493|CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.7e-141
Identity = 237/265 (89.43%), Postives = 253/265 (95.47%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAA++MALSSPSFAG+ VKL+PS+PE+ GN RV+MRK+  K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. Swiss-Prot
Match: sp|P07369|CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.6e-140
Identity = 242/267 (90.64%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKS--VSSGSPWYGPDRVKYL 60
           MA S+MALSS +FAGK VKL+PSS E+ GN RVTMRK+ATK+   SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLTDPVNNNAWAYATNFVPGK 266
           LENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CsGy1G020980 vs. TrEMBL
Match: tr|A0A0A0LX23|A0A0A0LX23_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G445860 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 4.5e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHLTDPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLTDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. TrEMBL
Match: tr|A0A1S3BAK6|A0A1S3BAK6_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487605 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 7.9e-148
Identity = 259/265 (97.74%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. TrEMBL
Match: tr|A0A1S3AZZ0|A0A1S3AZZ0_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484386 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 3.1e-144
Identity = 250/265 (94.34%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MAAS+MALSSPS AGK VKL+P++PE+ G  R+TMRK+ATKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. TrEMBL
Match: tr|B9SF47|B9SF47_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_1214080 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 3.1e-144
Identity = 249/265 (93.96%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MA S+MALSSPSFAGK VKL+PS+PEL GN RV+MRK+A K+VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CsGy1G020980 vs. TrEMBL
Match: tr|B9S155|B9S155_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_0633890 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 5.3e-144
Identity = 249/265 (93.96%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
           MA S+MALSSPSFAGK VKL+PS+PEL GN RV+MRK+A KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLTDPVNNNAWAYATNFVPGK 266
           NLADHL DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of CsGy1G020980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147416.1	6.8e-151	100.00	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus...	[more]
XP_008444193.1	1.2e-147	97.74	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
XP_022142169.1	3.3e-145	95.85	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_022139935.1	1.2e-144	95.83	chlorophyll a-b binding protein 3, chloroplastic-like [Momordica charantia]	[more]
XP_023001458.1	1.2e-144	96.23	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]

BLAST of CsGy1G020980 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34430.1	2.6e-136	86.47	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	3.7e-135	86.52	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.4e-134	86.14	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.4e-134	86.14	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	1.2e-133	86.14	photosystem II light harvesting complex gene B1B2	[more]

BLAST of CsGy1G020980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P09756\|CB23_SOYBN	1.8e-142	93.56	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
sp\|P27495\|CB24_TOBAC	8.7e-142	91.01	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
sp\|P08221\|CB21_CUCSA	1.9e-141	93.33	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
sp\|P27493\|CB22_TOBAC	5.7e-141	89.43	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
sp\|P07369\|CB2G_SOLLC	1.6e-140	90.64	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of CsGy1G020980 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LX23\|A0A0A0LX23_CUCSA	4.5e-151	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A1S3BAK6\|A0A1S3BAK6_CUCME	7.9e-148	97.74	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3AZZ0\|A0A1S3AZZ0_CUCME	3.1e-144	94.34	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|B9SF47\|B9SF47_RICCO	3.1e-144	93.96	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RC...	[more]
tr\|B9S155\|B9S155_RICCO	5.3e-144	93.96	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G020980.1	CsGy1G020980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 2.0E-49 score: 168.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	G3DSA:1.10.3460.10		coord: 56..258 e-value: 8.6E-98 score: 328.0
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF55	SUBFAMILY NOT NAMED	coord: 1..265
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 48..262

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G020980	Cla019595	Watermelon (97103) v1	cgybwmB011
CsGy1G020980	Csa1G445860	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G020980	MELO3C002727	Melon (DHL92) v3.5.1	cgybmeB011
CsGy1G020980	ClCG03G006930	Watermelon (Charleston Gray)	cgybwcgB034
CsGy1G020980	CSPI01G21270	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G020980	CmaCh13G005410	Cucurbita maxima (Rimu)	cgybcmaB062
CsGy1G020980	CmoCh13G005730	Cucurbita moschata (Rifu)	cgybcmoB059
CsGy1G020980	Lsi02G008780	Bottle gourd (USVL1VR-Ls)	cgyblsiB028
CsGy1G020980	Cp4.1LG20g05070	Cucurbita pepo (Zucchini)	cgybcpeB079
CsGy1G020980	Cp4.1LG10g05840	Cucurbita pepo (Zucchini)	cgybcpeB022
CsGy1G020980	MELO3C002727.2	Melon (DHL92) v3.6.1	cgybmedB010
CsGy1G020980	CsaV3_1G032510	Cucumber (Chinese Long) v3	cgybcucB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G020980	Cucumber (Gy14) v2	cgybcgybB038
CsGy1G020980	Cucurbita maxima (Rimu)	cgybcmaB094
CsGy1G020980	Cucurbita maxima (Rimu)	cgybcmaB127
CsGy1G020980	Cucurbita maxima (Rimu)	cgybcmaB141
CsGy1G020980	Cucurbita moschata (Rifu)	cgybcmoB089
CsGy1G020980	Cucurbita moschata (Rifu)	cgybcmoB117
CsGy1G020980	Cucurbita moschata (Rifu)	cgybcmoB132
CsGy1G020980	Cucurbita pepo (Zucchini)	cgybcpeB006
CsGy1G020980	Cucurbita pepo (Zucchini)	cgybcpeB068
CsGy1G020980	Cucumber (Chinese Long) v2	cgybcuB043
CsGy1G020980	Bottle gourd (USVL1VR-Ls)	cgyblsiB013
CsGy1G020980	Melon (DHL92) v3.5.1	cgybmeB075
CsGy1G020980	Melon (DHL92) v3.6.1	cgybmedB070
CsGy1G020980	Watermelon (Charleston Gray)	cgybwcgB024
CsGy1G020980	Watermelon (97103) v1	cgybwmB052
CsGy1G020980	Wild cucumber (PI 183967)	cgybcpiB040
CsGy1G020980	Silver-seed gourd	carcgybB0431
CsGy1G020980	Silver-seed gourd	carcgybB0552
CsGy1G020980	Silver-seed gourd	carcgybB0789
CsGy1G020980	Silver-seed gourd	carcgybB0943
CsGy1G020980	Cucumber (Chinese Long) v3	cgybcucB047
CsGy1G020980	Watermelon (97103) v2	cgybwmbB012
CsGy1G020980	Watermelon (97103) v2	cgybwmbB033
CsGy1G020980	Wax gourd	cgybwgoB021
CsGy1G020980	Wax gourd	cgybwgoB026