Cla019595 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019595
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Chlorophyll a-b binding protein 21, chloroplastic (AHRD V1 ***- CB22_TOBAC); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
Location	Chr3 : 7466244 .. 7468455 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCTCAACAATGGCTCTGTCCTCACCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCCCCCCTGAGCTTCTCGGCAATGGCAGAGTCAGTATGAGGAAATCCGTTGCCAAGCCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCATCGGAGATTCACCGGTGACTACGGTTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTAACAAATCATCAGGCTACCATACTATTCTTCCATAATTTAACACAAAAAAAGAAAAAAGAAAAGAAAATATAAGTTTTTTATGGTAATTTTGATGACTATTTGATTTTCCGTTTTATTTTCTTAAAAATTTAGTTTTATAAACACTGATTTCCTTGTCTTATTCTCTTCTAGATAAATGTGTTCAAAACTCAAACCCAATTTTTAAAATTTAATGCTTTGGTTTTGTAACCTAATTTGTGGCAATGTTTTCAAAATTGTCAAAGTTTCACAAACTAAAAAGTAATATAGTTTTTAAAATTTTAATTTATGTTTTTTAAAAAGTCAAGTTTCACAAACTAAAAAATAATATAGTTTTTAAAATTTTAATTTTTGTCTTTTAAATTTTGATTAGAATTAAAATAATGTCATCTTGAAAAAAATCGATAAAGATCCTTGTAAAGAAATTTGTGAAAATACTCACAAATTTCAAAAACCATATGATGCAGAGTTTTAAAAAACTTATATAAGATCAAATAAGAAATTCAATTTCTAAATTAAAAATGTCTAAACTTAATAAACTGAATTAATTAAGACATACCATCATGATGCAAGAAGGCAGAAGTTAAAAGGATCTCTCACCCACATTTTGTGTTTAATATATGTTTTAACCTCATCAAATATTATGAAAATTGGAAGTTCATTAAATACAAAACAGAAGGTTGAAAATTTATTAGATACACTAGAAAAATTAGAATTTTTTAGACAAAAAAAATTAAACTTAGTAAATATAATACTGAAGATTTAAGAGATGATTTAGTAGATACCTTTAAACTTCAAATACCGCTACACAATTCTTAAATTTAAGACTCTATTTAATAACCATTTTAAAAAAAAAAATTTAATGAAATTCATATTTGCTAATTTTCTCTCAAATTTATAATTATGGTTTTTCATTTATAAATAAACATTTGAATTCATAGTCAAATTCTAAAAATAAAAATTAATTTGTGAAAATAAAAACAAACTTTTTTGAAAATTATTTTATTTTTTATTTAGTTTTCAAACTTTGACTTAGTTTTTAAAAATATTAGATAATAGAACATATAAACTTAAGAAAAAGGAAGTAATGTTTATAAATTTTAATTTTAAAAAACTAATAAATAAATGGGTAATTATTTTAAATTGCAAAATTGCATAAATATTTTCAAATATAACAAAATGTGTTTATTTATTTGATAGCAATATTTATAACAGTATATTAATAATATTTTGTTATATATGTAAATAGTTTGATATTTTTTTATATTTAAAAATATCCAAAATAAATAACTAAATGGTTATTACCTTAAAAACAAAAATGGTAAATTTAACCAAAAAAAAGTGGAAATAAATAAAGTAGAGGATGTCTCATAATTGACTTGGCGGTTGGTTCAGGTGGGCCATGCTCGGAGCGTTCGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAGCGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTAGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCACGGGGGCCGTCGAGGGATACCGTATCGCCGGTGGCCCACTTGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA

mRNA sequence

ATGGCGGCCTCAACAATGGCTCTGTCCTCACCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCCCCCCTGAGCTTCTCGGCAATGGCAGAGTCAGTATGAGGAAATCCGTTGCCAAGCCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCATCGGAGATTCACCGGTGACTACGGTTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGGGCCATGCTCGGAGCGTTCGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAGCGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTAGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCACGGGGGCCGTCGAGGGATACCGTATCGCCGGTGGCCCACTTGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA

Coding sequence (CDS)

ATGGCGGCCTCAACAATGGCTCTGTCCTCACCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCCCCCCTGAGCTTCTCGGCAATGGCAGAGTCAGTATGAGGAAATCCGTTGCCAAGCCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCATCGGAGATTCACCGGTGACTACGGTTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGGGCCATGCTCGGAGCGTTCGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAGCGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTAGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCACGGGGGCCGTCGAGGGATACCGTATCGCCGGTGGCCCACTTGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA

Protein sequence

MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLIGDSPVTTVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREVWRSSVVQGGFTNLQRRWAGLLREPELDPRPKHSSHLGLSGGSHGGRRGIPYRRWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of Cla019595 vs. Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.0e-75
Identity = 160/268 (59.70%), Postives = 178/268 (66.42%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPS AG+AVKL+PS PE+ GNGRVSMRK+VAKPV+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGE PSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + V+ G     +  + +  E  LD    P   H+  +           G   G    
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.3e-73
Identity = 163/267 (61.05%), Postives = 177/267 (66.29%), Query Frame = 1


Query: 2   AASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGPF 61
           AAS+MALSSPSLAGKAVKL PS PE+   GRVSMRK+V K VSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREVW 121
           SGEPPSYL G+ P      T G+  D     +     V H+R   L   G  FP   E+ 
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP---ELL 122

Query: 122 RSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYRR 181
             + V+ G     +  + +  E  LD    P   H+  +     +     G   G     
Sbjct: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG 182

Query: 182 WPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
            P  EVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 183 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 257
           LENLADHLA PVNNNAWAYATNFVPGK
Sbjct: 243 LENLADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Cla019595 vs. Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-72
Identity = 160/270 (59.26%), Postives = 176/270 (65.19%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRK--SVAKPVSSGSPWYGPDRVKYL 60
           MAASTMALSSPS AGKAVKL+PS  E+ GNG+V+MRK  S AK VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRR 120
           GPFSGE PSYL G+ P      T G+  D     +     V H R   L   G  FP   
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP--- 120

Query: 121 EVWRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIP 180
           E+   + V+ G     +  + +  E  LD    P   H+  +           G   G  
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 180

Query: 181 YRRWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240
               P  EV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 257
           KGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Cla019595 vs. Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-72
Identity = 158/270 (58.52%), Postives = 174/270 (64.44%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSV--AKPVSSGSPWYGPDRVKYL 60
           M ASTMALSSPS AG AVKL+PS  E+ GNG+  MRK+V  AKPVSSGSPWYGPDRVKYL
Sbjct: 1   MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRR 120
           GPFSGE PSYL G+ P      T G+  D     +     V H R   L   G  FP   
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP--- 120

Query: 121 EVWRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIP 180
           E+   + V+ G     +  + +  E  LD    P   H+  +           G   G  
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYR 180

Query: 181 YRRWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240
               P  EVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 VAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 257
           KGPL+NL DHLADPVNNNAWAYATNFVPGK
Sbjct: 241 KGPLDNLVDHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Cla019595 vs. Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 6.9e-72
Identity = 157/270 (58.15%), Postives = 175/270 (64.81%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSV--AKPVSSGSPWYGPDRVKYL 60
           MAA+TMALSSPS AGKAVK +PS  E+ GNG+ +MRK+V  AKPVSSGSPWYGPDRVKYL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRR 120
           GPFSGE PSYL G+ P      T  +  D     +     V H R   L   G  FP   
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFP--- 120

Query: 121 EVWRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIP 180
           E+   + V+ G     +  + +  E  LD    P   H+  +           G   G  
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 180

Query: 181 YRRWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240
               P  EV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 VAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 257
           KGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of Cla019595 vs. TrEMBL
Match: A0A059CCT1_EUCGR (Chlorophyll a-b binding protein, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_D00319 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.8e-77
Identity = 167/268 (62.31%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG+AVKL+PS PELLGNGRVSMRK+V KPVSSGSPWYGPDR KYLGP
Sbjct: 1   MAASTMALSSPSLAGQAVKLSPSTPELLGNGRVSMRKTVGKPVSSGSPWYGPDRAKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + ++ G     +  A +  E  LD    P   H+  +           G   G    
Sbjct: 121 LARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVILMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. TrEMBL
Match: H9B8S6_HEVBR (Chlorophyll a-b binding protein, chloroplastic OS=Hevea brasiliensis GN=Cab PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 168/268 (62.69%), Postives = 181/268 (67.54%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGKAVKLTPS P L+GN RVSMRKSV KPVSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLTPSAPGLMGNARVSMRKSVGKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHL----GLSGGSHGGRRGIPYR 180
              + V+ G     +  A +  E  LD    P   H+  +     +     G   G    
Sbjct: 121 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. TrEMBL
Match: A0A059CBZ6_EUCGR (Chlorophyll a-b binding protein, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_D00321 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.9e-76
Identity = 166/268 (61.94%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG+AVKL+PS PELLGNGR+SMRK+V KPVSSGSPWYGPDR KYLGP
Sbjct: 36  MAASTMALSSPSLAGQAVKLSPSTPELLGNGRISMRKAVRKPVSSGSPWYGPDRAKYLGP 95

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 96  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 155

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + V+ G     +  A +  E  LD    P   H+  +           G   G    
Sbjct: 156 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVILMGAVEGYRIA 215

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 216 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 275

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 276 PLENLADHLADPVSNNAWAYATNFVPGK 300

[Close]

BLAST of Cla019595 vs. TrEMBL
Match: B9SF47_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_1214080 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.5e-76
Identity = 167/268 (62.31%), Postives = 182/268 (67.91%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGKAVKL+PS PEL+GNGRVSMRK+ AK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + V+ G     +  + +  E  LD    P   H+  +     S     G   G    
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. TrEMBL
Match: A0A059CC82_EUCGR (Chlorophyll a-b binding protein, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_D00320 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.5e-76
Identity = 165/268 (61.57%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG+AVKL+PS PELLGNGRVSMRK+V KPVSSGSPWYGPDR K+LGP
Sbjct: 1   MAASTMALSSPSLAGQAVKLSPSTPELLGNGRVSMRKTVGKPVSSGSPWYGPDRAKHLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + ++ G     +  A +  E  LD    P   H+  +           G   G    
Sbjct: 121 LARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVILMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVSNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. NCBI nr
Match: gi|659068394|ref|XP_008444193.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 4.2e-77
Identity = 170/268 (63.43%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLTPS PEL GN RV+MRKS AK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H+R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + V+ G     +  + +  E  LD    P   H+  +     S     G   G    
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. NCBI nr
Match: gi|702317325|ref|XP_010052093.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Eucalyptus grandis])

HSP 1 Score: 296.2 bits (757), Expect = 5.5e-77
Identity = 167/268 (62.31%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAG+AVKL+PS PELLGNGRVSMRK+V KPVSSGSPWYGPDR KYLGP
Sbjct: 1   MAASTMALSSPSLAGQAVKLSPSTPELLGNGRVSMRKTVGKPVSSGSPWYGPDRAKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + ++ G     +  A +  E  LD    P   H+  +           G   G    
Sbjct: 121 LARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVILMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. NCBI nr
Match: gi|743934388|ref|XP_011011531.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Populus euphratica])

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-76
Identity = 169/268 (63.06%), Postives = 185/268 (69.03%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPSLAGKAVKLTPS PEL+GNGRVSMRK+  KPVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSLAGKAVKLTPSSPELMGNGRVSMRKTT-KPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H+R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + V+ G     +  A +  E  LD    P   H+  +     +     G   G    
Sbjct: 121 LSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  E+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 264

[Close]

BLAST of Cla019595 vs. NCBI nr
Match: gi|747097135|ref|XP_011096520.1| (PREDICTED: chlorophyll a-b binding protein 21, chloroplastic [Sesamum indicum])

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-76
Identity = 167/268 (62.31%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPS AG+AVKL+PS PE+ GNGRVSMRK+VAKPVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHLGLSGGSH----GGRRGIPYR 180
              + V+ G     +  A +  E  LD    P   H+  +           G   G    
Sbjct: 121 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla019595 vs. NCBI nr
Match: gi|379069812|gb|AFC91647.1| (chloroplast chlorophyll A/B binding protein [Hevea brasiliensis])

HSP 1 Score: 294.3 bits (752), Expect = 2.1e-76
Identity = 168/268 (62.69%), Postives = 181/268 (67.54%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKAVKLTPSPPELLGNGRVSMRKSVAKPVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGKAVKLTPS P L+GN RVSMRKSV KPVSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLTPSAPGLMGNARVSMRKSVGKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLIGDSPVT----TVGILPDFPQTLRPSPRTVGHARSVRLRVPGASFPQRREV 120
           FSGEPPSYL G+ P      T G+  D     +     V H R   L   G  FP   E+
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP---EL 120

Query: 121 WRSSVVQGGFTNLQRRWAGLLREPELD----PRPKHSSHL----GLSGGSHGGRRGIPYR 180
              + V+ G     +  A +  E  LD    P   H+  +     +     G   G    
Sbjct: 121 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 180

Query: 181 RWPTWEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
             P  EVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAYATNFVPGK 257
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Cla019595 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CB22_TOBAC	3.0e-75	59.70	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 ...	[more]
CB23_SOYBN	1.3e-73	61.05	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=...	[more]
CB24_TOBAC	1.1e-72	59.26	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 ...	[more]
CB27_TOBAC	2.4e-72	58.52	Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE...	[more]
CB25_PETSP	6.9e-72	58.15	Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3...	[more]

BLAST of Cla019595 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059CCT1_EUCGR	3.8e-77	62.31	Chlorophyll a-b binding protein, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_...	[more]
H9B8S6_HEVBR	1.5e-76	62.69	Chlorophyll a-b binding protein, chloroplastic OS=Hevea brasiliensis GN=Cab PE=3...	[more]
A0A059CBZ6_EUCGR	1.9e-76	61.94	Chlorophyll a-b binding protein, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_...	[more]
B9SF47_RICCO	2.5e-76	62.31	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_12140...	[more]
A0A059CC82_EUCGR	5.5e-76	61.57	Chlorophyll a-b binding protein, chloroplastic OS=Eucalyptus grandis GN=EUGRSUZ_...	[more]

BLAST of Cla019595 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659068394\|ref\|XP_008444193.1\|	4.2e-77	63.43	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
gi\|702317325\|ref\|XP_010052093.1\|	5.5e-77	62.31	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Eucalyptus gran...	[more]
gi\|743934388\|ref\|XP_011011531.1\|	1.2e-76	63.06	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Populus euphrat...	[more]
gi\|747097135\|ref\|XP_011096520.1\|	1.2e-76	62.31	PREDICTED: chlorophyll a-b binding protein 21, chloroplastic [Sesamum indicum]	[more]
gi\|379069812\|gb\|AFC91647.1\|	2.1e-76	62.69	chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0015979	photosynthesis
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
cellular_component	GO:0044425	membrane part
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009536	plastid
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0031409	pigment binding
molecular_function	GO:0016168	chlorophyll binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019595	Cla019595.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..256 score: 5.9E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 175..222 score: 1.4
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	G3DSA:1.10.3460.10		coord: 170..248 score: 3.0
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 48..141 score: 1.44E-31coord: 177..253 score: 1.44
None	No IPR available	PANTHER	PTHR21649:SF26	CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..256 score: 5.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019595	Cla97C03G058190	Watermelon (97103) v2	wmwmbB124
Cla019595	ClCG03G006930	Watermelon (Charleston Gray)	wcgwmB223
Cla019595	CSPI01G21270	Wild cucumber (PI 183967)	cpiwmB011
Cla019595	Cucsa.212260	Cucumber (Gy14) v1	cgywmB408
Cla019595	CmaCh13G005410	Cucurbita maxima (Rimu)	cmawmB186
Cla019595	CmoCh13G005730	Cucurbita moschata (Rifu)	cmowmB174
Cla019595	CmoCh03G013760	Cucurbita moschata (Rifu)	cmowmB613
Cla019595	Lsi02G008790	Bottle gourd (USVL1VR-Ls)	lsiwmB188
Cla019595	Cp4.1LG10g05840	Cucurbita pepo (Zucchini)	cpewmB069
Cla019595	Cp4.1LG16g07160	Cucurbita pepo (Zucchini)	cpewmB279
Cla019595	CsGy1G020980	Cucumber (Gy14) v2	cgybwmB011
Cla019595	MELO3C002727.2	Melon (DHL92) v3.6.1	medwmB144
Cla019595	CsaV3_1G032510	Cucumber (Chinese Long) v3	cucwmB014

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla019595	Cla013483	Watermelon (97103) v1	wmwmB093

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019595	Wax gourd	wgowmB421
Cla019595	Wax gourd	wgowmB472
Cla019595	Watermelon (97103) v1	wmwmB084
Cla019595	Cucumber (Gy14) v1	cgywmB022
Cla019595	Cucurbita maxima (Rimu)	cmawmB370
Cla019595	Cucurbita maxima (Rimu)	cmawmB622
Cla019595	Cucurbita maxima (Rimu)	cmawmB819
Cla019595	Cucurbita moschata (Rifu)	cmowmB362
Cla019595	Cucurbita moschata (Rifu)	cmowmB809
Cla019595	Melon (DHL92) v3.5.1	mewmB147
Cla019595	Melon (DHL92) v3.5.1	mewmB562
Cla019595	Watermelon (Charleston Gray)	wcgwmB125
Cla019595	Cucumber (Chinese Long) v2	cuwmB009
Cla019595	Cucumber (Chinese Long) v2	cuwmB480
Cla019595	Cucurbita pepo (Zucchini)	cpewmB024
Cla019595	Cucurbita pepo (Zucchini)	cpewmB478
Cla019595	Cucurbita pepo (Zucchini)	cpewmB508
Cla019595	Bottle gourd (USVL1VR-Ls)	lsiwmB136
Cla019595	Cucumber (Gy14) v2	cgybwmB451
Cla019595	Melon (DHL92) v3.6.1	medwmB549
Cla019595	Silver-seed gourd	carwmB0291
Cla019595	Silver-seed gourd	carwmB0419
Cla019595	Silver-seed gourd	carwmB0544
Cla019595	Silver-seed gourd	carwmB0729
Cla019595	Silver-seed gourd	carwmB0797
Cla019595	Silver-seed gourd	carwmB0956
Cla019595	Cucumber (Chinese Long) v3	cucwmB506
Cla019595	Watermelon (97103) v2	wmwmbB113