CsGy1G020360 (gene) Cucumber (Gy14) v2

NameCsGy1G020360
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionATP synthase subunit f, mitochondrial
LocationChr1 : 19067326 .. 19070528 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAAGTTAAGGAGCTGCCTGCCTATGTGAAACCGATGCTCTCCATTGATGCTGCCAAGAAGGCTGTGGAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTAGTTCAATTGATCCTCTCCTTCATGTCTGCTTTGGTGGTATGATCTTTTCGTACCTCGTTGCGCTTCCTGAGGAACGACGCCACCTTGAACATCAGCAACACGCCAAAGAACATGGCGGCCATTGATTGAGTTCTTTATATTTTGAGGTACGTGTTGTAATGTGGAGTATTTTTGTTATTGTTGGTTTGAGTAATTAGGATTATGTAAACCAAATCTTTCTGTATTTTTGGGTTTTGTTGGATTGACTGATTTCGGGTTCAATTCATGCATCTATTAAAATGGGTATTTGTGATCTGAAACTTTGGATTTAAAATCTGATCGCTGGAATTTGTTTCCCTTTTTCATTGTCAATTAACTTTGGGTGCTGAGATTGAATTTGTTTCCATTTAATTTTTCCCTTTCCCCCTTCATTTTCTGGGATTTGGAACTGGAAACCAAGACAATTGTTATTATTGTGTTGAATTTTGTCTACGCTGGTGCTCAAATGATCTTTCTTTCTAACTCTTTTTGTGTGTGTGATTACTGTTGGTAATACGTAATGAATACTGTTTCATGTGGAGTTTGTTAATTGTATGAGAGCATTCGGCATATGACTATCTTTAGTTCCTTATTAAGGCAATTCTTCTTATTCTGGCATAACCAGAGATCTTGAGTTTTTTTTTGTGTTTGGCTGAACGTTAACATGATTCTCAAGTGCAAAGCATGGTTTACAGCCCAAAACAATATAACATGGCCTTGGCTTTTATTGACCTCATAGGCTTGCAGCAAAGAAAGAACTTTAATTTGGCTAGTGTGGACGCTCTGGCACTTGTAGGAAAACTATCGAACACATGTTAGTGCAATAAAAGTTTTAGACATAGACAATGTAGGACCCAGACTAACATTTGTTAAACATACATCTAACACTTGTTATGTATGCTAAAGTCGACAAACATATGAAAAAAATTATAACATTTAAGAGCGAAGTACATCAAACCAATTTTGTAGGCGTATAAATATATAAACTTAATGACTTTGAATTTCTATATTTAAAAATGATATATATCTTTTTAAAATGTATGTTTTAATGAATGTATCATTTTCGTGTCCATGATGTAGTTTTTAATAAATGGTTGCTGTTGTGTTCTCTGTATTACTGTCTTGTATTTTTATTTGGCTTCCAAGGTTGCAAGCTTGACCTTTTGCTTCTTGAATCTTGGTGCCACCAAGAAGTACTTGTCATAATTAAAACGTGACATGCACTTTCACTAATTTCACTCTCTATTACTTATTCGTTAAAATAATCTTATGCATTTTTGGCGCTTGACGATGATAGAAAGAGGAAACAATACGTATGGCCATTAAATGAATGCTCTTTTATGGGACATAGAACCACTAGTGGCATCTTTTCTTTATATAAATTTAATGTTCGGTGTTTGTGGTGAATGTGAGTACCATTCATTTGAGGTCTACCCTTGCAGTTTTGAGTTTTTCTGCATCCATTAGTTCCCCACAATTAGGATATTTCATTGCTCTTTATGATTTCTTATAGTTGTAGCTGGTTGAAAGAAACATGTCTGATATGCATAATTTCCATCATTATAGACTTAAAAGATATCTTTTCTCATACCGTATTAGTATGTCCTTTCTTATCTTTTATTTTTTTCTGGAAACTGCTAAGGCTATTTTATTTCCTAAGATCAAACTCATAAAATTTCCCGCTTTTTGTTGCTCTGGCTTTTTGTTCCTTTTTTATATGTTGAGATCAGTTGTCTTTTGTGCTTTGGCTGCTTTCAAGGCTTAGTGGGGATGTTATAGTAGAGTGATTGAAAGAGTTATCGAGTCTATTTTATTTCCTAAGAATGAAGTTTGTTGCTTTCTATTGCTCTGCTATTTTGTTCCCTCTATCTGATGAGATCAGTTGTCTTTTGTGCTTTGGCTTCTTGAAGGCACAGCGGGGAGGCGAGAGTAGAGTGATTGAAAGTGTACAATAACAAGTATTTAAATGAAGGGATATTTATTTTGGGGACAAAGTACCCGTGATAGGAGTCCTAGAATTGCTACCTTTGCCAGAATTTAAGCCTCCTGTACACAATGACAGCAGATCAATGAATAATCTATTGATATACGAGTCTGGAATTGTAGTGACCAATCCTCTCCAAAATACAATAAATCTTGTAAGGGATACAAAATCATAATAGAAAGTGAATTTAAACAACAAAACATAATAGAAATATGAGAGTCGTATAAAAGTATTTTAATTAAGATAAGTATCTTGAGTAGTATATCCGACAAAGCGTTTAGAAAGAGAACACCATGAAGAAACCTTCAGACAAGAAAGAACCAAACTGATCATCCTAAGAAAATGAACAACCCTCTAAAATTCCATTCGAACCACAGCTCAGATGATAAATCCTTTACTGCTTTGGGCCATATAAAGACTTGACTTTTAAGGTATTAATAGTCTGTGCAGGCTTTTAAAACTTGCTTATAATCGTGTGATTGTAAATTTAAACTCACGTCTCTTTCAATGCTGGAGACTTGGATTTAGTCTCAATTATGTTCATAAACTCAACTCCCTTTTTCATACGTTTTTGTTTTTTCTGCAGGGTGAAGGTGCCTCAAAGATGTTTCTGGTCAATAATTTGTTTCCTGAATGTTTTTGTATCTTAGTCTTACTGGCTGAAACTTGCAATTCTTTTCTTTTATACATGGTGCCAGAGGAAATAAACGTACTTTTCTGTGATTTCTAATCATATATTGGTAACCATTCTTGAGTCGCAGCACATGTTCATGGCTGATTTCTTTACTTTATTGCACATTATCCTTCCCCATACTTGTTTCTCTAGTTAGTTCTTTGCCAATGGCCTATAATACTATTGCTGCAGACTTTAGATGCAAATTGATTCTTTCATTTCCTCAAGTCGTTAGTAGTAATCTCTAGGATTACAGTGATGAATTTAATTTGAATACTCACTAGTTTTTTGTGATAAAAAGGATGTTGGAGTGATTCTAAATATAACAAAAGTGATTTTTACCGTTTTAAAATAATTTTTAATGATATACCACCTTGTGG

mRNA sequence

ATGGCAATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAAGTTAAGGAGCTGCCTGCCTATGTGAAACCGATGCTCTCCATTGATGCTGCCAAGAAGGCTGTGGAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTAGTTCAATTGATCCTCTCCTTCATGCACAGCGGGGAGGCGAGAGTAGAGTGATTGAAAGTGGTGAAGGTGCCTCAAAGATGTTTCTGGTCAATAATTTGTTTCCTGAATGTTTTTGTATCTTAGTCTTACTGGCTGAAACTTGCAATTCTTTTCTTTTATACATGGTGCCAGAGGAAATAAACGTACTTTTCTGTGATTTCTAATCATATATTGGTAACCATTCTTGAGTCGCAGCACATGTTCATGGCTGATTTCTTTACTTTATTGCACATTATCCTTCCCCATACTTGTTTCTCTAGTTAGTTCTTTGCCAATGGCCTATAATACTATTGCTGCAGACTTTAGATGCAAATTGATTCTTTCATTTCCTCAAGTCGTTAGTAGTAATCTCTAGGATTACAGTGATGAATTTAATTTGAATACTCACTAGTTTTTTGTGATAAAAAGGATGTTGGAGTGATTCTAAATATAACAAAAGTGATTTTTACCGTTTTAAAATAATTTTTAATGATATACCACCTTGTGG

Coding sequence (CDS)

ATGGCAATGAAGCAATTCTTCTCCGAAATCAAGGGCTTGAAAGTTAAGGAGCTGCCTGCCTATGTGAAACCGATGCTCTCCATTGATGCTGCCAAGAAGGCTGTGGAGAGAAGTCTCGACAATTACAACGCCAAGTACATTCAAACTAGTTCAATTGATCCTCTCCTTCATGCACAGCGGGGAGGCGAGAGTAGAGTGATTGAAAGTGGTGAAGGTGCCTCAAAGATGTTTCTGGTCAATAATTTGTTTCCTGAATGTTTTTGTATCTTAGTCTTACTGGCTGAAACTTGCAATTCTTTTCTTTTATACATGGTGCCAGAGGAAATAAACGTACTTTTCTGTGATTTCTAA

Protein sequence

MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQRGGESRVIESGEGASKMFLVNNLFPECFCILVLLAETCNSFLLYMVPEEINVLFCDF
BLAST of CsGy1G020360 vs. NCBI nr
Match: XP_004146334.1 (PREDICTED: uncharacterized protein LOC101202935 [Cucumis sativus] >KGN65482.1 hypothetical protein Csa_1G424875 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLH   
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. NCBI nr
Match: XP_008453564.1 (PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 8.4e-21
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKK V+RSLDNY+AKYIQTSSIDPL H   
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKVVQRSLDNYHAKYIQTSSIDPLFHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. NCBI nr
Match: XP_023515839.1 (uncharacterized protein LOC111779885 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106.3 bits (264), Expect = 7.1e-20
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAM+QF+SEIKGLKVKELPAYVKPMLS+D  KKAV+R LDNYNAKYIQTSSIDPLLH   
Sbjct: 1  MAMRQFYSEIKGLKVKELPAYVKPMLSVDYVKKAVQRGLDNYNAKYIQTSSIDPLLHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. NCBI nr
Match: XP_022933862.1 (uncharacterized protein LOC111441149 [Cucurbita moschata])

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAM+QFFSEI+GLKVKELP YVKPML+ID+ KKAV+R LDNYNAKYIQTSSIDPLLH   
Sbjct: 1  MAMRQFFSEIRGLKVKELPGYVKPMLTIDSVKKAVQRGLDNYNAKYIQTSSIDPLLHVCY 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. NCBI nr
Match: XP_022974229.1 (uncharacterized protein LOC111472849 [Cucurbita maxima])

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAM+QFFSEI+GLKVKELP YVKPMLSID AKKAV+R LDNYNAKYIQT SIDPLLH   
Sbjct: 1  MAMRQFFSEIRGLKVKELPGYVKPMLSIDYAKKAVQRGLDNYNAKYIQTGSIDPLLHVCY 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. TAIR10
Match: AT4G30010.1 (unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 1.9e-14
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLH 58
          MA+++ +SEI+G KV ELP Y+K   S++  K +V+R LDNYN KYIQTSS+DP+LH
Sbjct: 1  MALRRVYSEIRGKKVTELPGYIKSTFSMETVKTSVKRGLDNYNEKYIQTSSVDPILH 57

BLAST of CsGy1G020360 vs. TrEMBL
Match: tr|A0A0A0LXD4|A0A0A0LXD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G424875 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.7e-23
Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLH   
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. TrEMBL
Match: tr|A0A1S3BWJ6|A0A1S3BWJ6_CUCME (uncharacterized protein LOC103494239 OS=Cucumis melo OX=3656 GN=LOC103494239 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.6e-21
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKK V+RSLDNY+AKYIQTSSIDPL H   
Sbjct: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKVVQRSLDNYHAKYIQTSSIDPLFHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. TrEMBL
Match: tr|M5XTW0|M5XTW0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G075600 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-17
Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MA+++F++EIKGLKVKELP+YVKPMLS+D AKK V+R LDNY+AKYIQT+S+DPL H   
Sbjct: 1  MALRRFYNEIKGLKVKELPSYVKPMLSVDYAKKTVQRGLDNYHAKYIQTNSVDPLFHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. TrEMBL
Match: tr|W9R048|W9R048_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016868 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.3e-17
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MA + F+ EIKGLKVKELP +VKPMLSID AKKAVER+LDNY+AKYIQTSSIDPL H   
Sbjct: 1  MAWRNFYHEIKGLKVKELPNHVKPMLSIDYAKKAVERALDNYHAKYIQTSSIDPLYHVCF 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of CsGy1G020360 vs. TrEMBL
Match: tr|F6I5N3|F6I5N3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0103g00630 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.0e-16
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0

Query: 1  MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHAQR 60
          MAM+ F++EI+GLKVKELPA+VKPM +ID  KK++ + LDNY+AKYIQTSSIDPLLH   
Sbjct: 1  MAMRNFYNEIRGLKVKELPAHVKPMFTIDYIKKSINKGLDNYHAKYIQTSSIDPLLHVCY 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004146334.11.2e-2295.16PREDICTED: uncharacterized protein LOC101202935 [Cucumis sativus] >KGN65482.1 hy... [more]
XP_008453564.18.4e-2188.71PREDICTED: uncharacterized protein LOC103494239 [Cucumis melo][more]
XP_023515839.17.1e-2083.87uncharacterized protein LOC111779885 [Cucurbita pepo subsp. pepo][more]
XP_022933862.11.2e-1982.26uncharacterized protein LOC111441149 [Cucurbita moschata][more]
XP_022974229.11.2e-1983.87uncharacterized protein LOC111472849 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT4G30010.11.9e-1457.89unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LXD4|A0A0A0LXD4_CUCSA7.7e-2395.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G424875 PE=4 SV=1[more]
tr|A0A1S3BWJ6|A0A1S3BWJ6_CUCME5.6e-2188.71uncharacterized protein LOC103494239 OS=Cucumis melo OX=3656 GN=LOC103494239 PE=... [more]
tr|M5XTW0|M5XTW0_PRUPE4.9e-1770.97Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G075600 PE=4 SV=1[more]
tr|W9R048|W9R048_9ROSA8.3e-1777.42Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016868 PE=4 SV=1[more]
tr|F6I5N3|F6I5N3_VITVI7.0e-1669.35Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0103g00630 PE=4 SV=... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G020360.1CsGy1G020360.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36059FAMILY NOT NAMEDcoord: 1..61

The following gene(s) are paralogous to this gene:

None