CsGy1G016310 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G016310
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	UPF0057 membrane protein At4g30660
Location	Chr1 : 13276339 .. 13276706 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGACCGCCATTAAACCATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCAGGCATGGATGTTGCACCGTACGTTTCTGATTCTTTTCTCCTTTTGTTTGAATTTTTCCTCTTTTCTTTTTTTTTTATCAATTCGAATGTAATTCTGATTTATGATTGCTTGTGGTGGTGGTGGTGCTTGTGGTTGCAGGTTGAGTTTTGTATATGCCTTCTTTTGACATTTCTCGGTTATGTTCCTGGAATCATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCAATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAG

mRNA sequence

CTCAGACCGCCATTAAACCATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCAGGCATGGATGTTGCACCGTTGAGTTTTGTATATGCCTTCTTTTGACATTTCTCGGTTATGTTCCTGGAATCATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCAATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAG

Coding sequence (CDS)

ATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCAGGCATGGATGTTGCACCGTTGAGTTTTGTATATGCCTTCTTTTGACATTTCTCGGTTATGTTCCTGGAATCATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCAATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAG

Protein sequence

MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDRNEYFDEYRRPLYAPA

Homology

[Close]

BLAST of CsGy1G016310 vs. NCBI nr
Match: XP_004146673.1 (PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_1G257300 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 7.8e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-35
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. NCBI nr
Match: XP_022135490.1 (UPF0057 membrane protein At4g30660-like [Momordica charantia])

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-33
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          ++YFDEYRRPLY  A
Sbjct: 61 DQYFDEYRRPLYVLA 75

[Close]

BLAST of CsGy1G016310 vs. NCBI nr
Match: XP_002308410.2 (UPF0057 membrane protein At4g30660 [Populus trichocarpa] >XP_011033391.1 PREDICTED: UPF0057 membrane protein At4g30660-like [Populus euphratica] >ABK93775.1 unknown [Populus trichocarpa] >PNT32316.1 hypothetical protein POPTR_006G182500v3 [Populus trichocarpa])

HSP 1 Score: 149.4 bits (376), Expect = 4.7e-33
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEI CEILIAIL+PPLGVC RHGCC+VEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEICCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. NCBI nr
Match: XP_022925751.1 (UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022965238.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_022965241.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_023521009.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521011.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521012.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529545.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529546.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-33
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. TAIR10
Match: AT4G28088.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-29
Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT LGYVPGIIYALYAIV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 NEYFDEYRRPLY 73
          +++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of CsGy1G016310 vs. TAIR10
Match: AT4G30660.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 124.0 bits (310), Expect = 3.9e-29
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 NEYFDEYRRPLYA 74
           EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of CsGy1G016310 vs. TAIR10
Match: AT2G24040.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-28
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 NEYFDEYRRPLY 73
          +EYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of CsGy1G016310 vs. TAIR10
Match: AT4G30650.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 97.4 bits (241), Expect = 3.9e-21
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

[Close]

BLAST of CsGy1G016310 vs. TAIR10
Match: AT2G38905.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-12
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 6  EIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIV 57
          E F EI++AIL+PP+GV LR+G C VEF ICLLLT LGY+PGIIYA+Y +V
Sbjct: 4  ETFLEIILAILLPPVGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV 53

[Close]

BLAST of CsGy1G016310 vs. Swiss-Prot
Match: sp|Q9SUI0|RC24_ARATH (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 7.0e-28
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 NEYFDEYRRPLYA 74
           EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of CsGy1G016310 vs. Swiss-Prot
Match: sp|O82232|RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.5e-27
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 NEYFDEYRRPLY 73
          +EYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of CsGy1G016310 vs. Swiss-Prot
Match: sp|Q9M095|RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.0e-20
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

[Close]

BLAST of CsGy1G016310 vs. Swiss-Prot
Match: sp|Q9LRI7|OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-18
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 4  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDRNEY 63
          RC  F EIL+AI++PPLGV LR GCC++EFCICLLLT LGYVPGIIYA+Y +V +D ++Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]

BLAST of CsGy1G016310 vs. Swiss-Prot
Match: sp|A2Y075|LTI6B_ORYSI (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 3.8e-10
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 10 EILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAI 56
          +ILIAI++PPLGV L+ G C  EF ICLLLTFLGY+PGIIYA+YAI
Sbjct: 9  DILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAI 53

[Close]

BLAST of CsGy1G016310 vs. TrEMBL
Match: tr|A0A0A0LTR2|A0A0A0LTR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.2e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. TrEMBL
Match: tr|A0A1S3B9R0|A0A1S3B9R0_CUCME (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-35
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. TrEMBL
Match: tr|A9PBM2|A9PBM2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G182500v3 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-33
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEI CEILIAIL+PPLGVC RHGCC+VEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEICCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          NEYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. TrEMBL
Match: tr|A0A2I4F9J0|A0A2I4F9J0_9ROSI (UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC108996740 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-33
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAIL+PPLGVC RHGCC+VEFCICLLLT LGY+PGIIYALYAIVF+DR
Sbjct: 1  MPSRCEIFCEILIAILLPPLGVCFRHGCCSVEFCICLLLTILGYIPGIIYALYAIVFVDR 60

Query: 61 NEYFDEYRRPLYAPA 76
          ++YFDEYRRPLYAPA
Sbjct: 61 DQYFDEYRRPLYAPA 75

[Close]

BLAST of CsGy1G016310 vs. TrEMBL
Match: tr|A0A2H5P874|A0A2H5P874_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_112610 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 66/74 (89.19%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MP+RCEIFCEILIA+L+PP+GVCLRHGCC+VEFCICLLLT LGYVPGIIYALYAIVF+DR
Sbjct: 1  MPTRCEIFCEILIAVLLPPVGVCLRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFVDR 60

Query: 61 NEYFDEYRRPLYAP 75
          +EYFDEYRRPLYAP
Sbjct: 61 DEYFDEYRRPLYAP 74

The following BLAST results are available for this feature:

BLAST of CsGy1G016310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146673.1	7.8e-36	100.00	PREDICTED: UPF0057 membrane protein At4g30660-like [Cucumis sativus] >KGN65173.1...	[more]
XP_008443846.1	3.0e-35	98.67	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]	[more]
XP_022135490.1	3.6e-33	93.33	UPF0057 membrane protein At4g30660-like [Momordica charantia]	[more]
XP_002308410.2	4.7e-33	93.33	UPF0057 membrane protein At4g30660 [Populus trichocarpa] >XP_011033391.1 PREDICT...	[more]
XP_022925751.1	6.2e-33	92.00	UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF...	[more]

BLAST of CsGy1G016310 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28088.1	1.3e-29	79.17	Low temperature and salt responsive protein family	[more]
AT4G30660.1	3.9e-29	78.08	Low temperature and salt responsive protein family	[more]
AT2G24040.1	1.9e-28	76.39	Low temperature and salt responsive protein family	[more]
AT4G30650.1	3.9e-21	76.67	Low temperature and salt responsive protein family	[more]
AT2G38905.1	1.1e-12	68.63	Low temperature and salt responsive protein family	[more]

BLAST of CsGy1G016310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUI0\|RC24_ARATH	7.0e-28	78.08	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
sp\|O82232\|RC22_ARATH	3.5e-27	76.39	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
sp\|Q9M095\|RC23_ARATH	7.0e-20	76.67	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
sp\|Q9LRI7\|OSR8_ORYSJ	3.8e-18	67.19	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
sp\|A2Y075\|LTI6B_ORYSI	3.8e-10	73.91	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]

BLAST of CsGy1G016310 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTR2\|A0A0A0LTR2_CUCSA	5.2e-36	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=4 SV=1	[more]
tr\|A0A1S3B9R0\|A0A1S3B9R0_CUCME	2.0e-35	98.67	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=4 ...	[more]
tr\|A9PBM2\|A9PBM2_POPTR	3.1e-33	93.33	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G182500v3 PE=...	[more]
tr\|A0A2I4F9J0\|A0A2I4F9J0_9ROSI	5.3e-33	89.33	UPF0057 membrane protein At4g30660-like OS=Juglans regia OX=51240 GN=LOC10899674...	[more]
tr\|A0A2H5P874\|A0A2H5P874_CITUN	1.2e-32	89.19	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_112610 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR000612	PMP3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G016310.1	CsGy1G016310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 9..56 e-value: 5.5E-17 score: 61.6
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF34	LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN	coord: 1..73

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G016310	Cla018743	Watermelon (97103) v1	cgybwmB090
CsGy1G016310	Csa1G257300	Cucumber (Chinese Long) v2	cgybcuB008
CsGy1G016310	MELO3C010211	Melon (DHL92) v3.5.1	cgybmeB057
CsGy1G016310	ClCG06G012500	Watermelon (Charleston Gray)	cgybwcgB073
CsGy1G016310	CSPI01G17820	Wild cucumber (PI 183967)	cgybcpiB007
CsGy1G016310	CmaCh11G004520	Cucurbita maxima (Rimu)	cgybcmaB050
CsGy1G016310	CmoCh11G004520	Cucurbita moschata (Rifu)	cgybcmoB047
CsGy1G016310	MELO3C010211.2	Melon (DHL92) v3.6.1	cgybmedB052
CsGy1G016310	CsaV3_1G029080	Cucumber (Chinese Long) v3	cgybcucB006
CsGy1G016310	Cla97C06G121730	Watermelon (97103) v2	cgybwmbB074
CsGy1G016310	Bhi02G000674	Wax gourd	cgybwgoB112
CsGy1G016310	Carg14080	Silver-seed gourd	carcgybB0509

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy1G016310	CsGy1G017970	Cucumber (Gy14) v2	cgybcgybB003

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G016310	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G016310	Cucurbita pepo (Zucchini)	cgybcpeB051