CsGy1G013660 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACTTATTCTTGTCATAATCATGCTAAAGAAGGGTTTTATTTGTGAATGTAAGTTTAACTGGTGCTTTTGCATGTTCTGGTATATTGTAGATCACGTTTCCTCAAGCTGGGAAAAGTATTCTTGAACAAAGTTCATCAAAGATTGAATGTTGGCTGCAAAAAGATGCATGTGAATTCTTATTTAACATAAATGGTTCCAATCCATCTGAGTTTGGTGAGGAATTAAACTAGACATGATTTGAACTGTCTTTTCATTCATCAGAGAAAATACGCATCTCATTGCCTCGGTTGGCTAGGATTTCAATTTTTGTTAATTTCATGTGCTATTTGAGTTAACAGAAGAAACAAAATCTTGCTGACATTATTCAAATGCATCACCAAGATAAAGCACGACCTGTCAATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATACTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGTCCAGGCATATGAACTAGTATATAGGTAAGCTTATATCTCAATATCACTTATATTTATTCGGTGGTATATATGTTAGAAAAGAGCTCAATGAGAAATATATATATATAGAACTAATAATTATATGCTGTAAATTTGGTAAGTTTAGAAAAGTATACCCATCCCTGTACATAAGTGGCTTAGTGAGATTGATTACGAACTCTGTGTTGTTGAATTATTTATTTTTTATCTTTTTTTTTTTTGGTATTAAGTTTGATGAAAATTTTGTAAAGTTCGATGAAAATATTTGTAAAGATCTGCAAATATAGACATGAAGCCATTTTGGTGTTTGGCTGTTTGTTTTGGTTGCGTTCTCATTTTCTTTAACTGCAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTGAGGCTGCCGAGGAAAGGCTGAAGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGCGATTAACTCAGTTAGTTTTTCAGGTAACGCTTCATACAATTGACTTTGCCAGATGCTCATGATCATGATGTGAAGCTTAAGTTGGAGTTTGTAAAGAAGGTGCAAAAGTCGATAGAACATTTCTTGCAGGGCCTATTAACGAGCCTGGTACTTCAAGCAGGGAACCTGATGCTAAAGCTTAAGCTCATAATGACTTAGTTTAAAGTAAAAGGATTGGACATGGCATATAACATAGCTGAGACTTGGGATTGTTGATATCATCTGTGTTTATAGTTTTAACTTTTAAGAATGGATTGTTGCGTTTATTTTGCAGCAAAGAATAGTGGTTTATTACTTGATGATGAAGTTGGATATTGATTCTGCCCTTACGAAGTCTGTTATTTAACAGTACTTCTTCTGTATTATTTTTCCTCGCCCTTAATTTTGTTTAATTTAGCTCGCTAAACCTTATGATTTTGGAGGCTATTTTAATGAAGGGGGAAGTGAAGCTTTACTGCTTACAGTTTCATTGGCTGCACTATTATGTTGA ATGGAAACTTATTCTTGTCATAATCATGCTAAAGAAGGAAGAAACAAAATCTTGCTGACATTATTCAAATGCATCACCAAGATAAAGCACGACCTGTCAATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATACTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGTCCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTGAGGCTGCCGAGGAAAGGCTGAAGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGCGATTAACTCAGTTAGTTTTTCAGCAAAGAATAGTGGTTTATTACTTGATGATGAAGTTGGATATTGATTCTGCCCTTACGAAGTCTCTCGCTAAACCTTATGATTTTGGAGGCTATTTTAATGAAGGGGGAAGTGAAGCTTTACTGCTTACAGTTTCATTGGCTGCACTATTATGTTGA ATGGAAACTTATTCTTGTCATAATCATGCTAAAGAAGGAAGAAACAAAATCTTGCTGACATTATTCAAATGCATCACCAAGATAAAGCACGACCTGTCAATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATACTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGTCCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTGAGGCTGCCGAGGAAAGGCTGAAGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGCGATTAACTCAGTTAGTTTTTCAGCAAAGAATAGTGGTTTATTACTTGATGATGAAGTTGGATATTGATTCTGCCCTTACGAAGTCTCTCGCTAAACCTTATGATTTTGGAGGCTATTTTAATGAAGGGGGAAGTGAAGCTTTACTGCTTACAGTTTCATTGGCTGCACTATTATGTTGA METYSCHNHAKEGRNKILLTLFKCITKIKHDLSMQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLVFQQRIVVYYLMMKLDIDSALTKSLAKPYDFGGYFNEGGSEALLLTVSLAALLC
BLAST of CsGy1G013660 vs. NCBI nr
Match: KGN64828.1 (hypothetical protein Csa_1G120440 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 3.1e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. NCBI nr
Match: XP_016903052.1 (PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A [Cucumis melo]) HSP 1 Score: 99.8 bits (247), Expect = 1.1e-17 Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. NCBI nr
Match: KGN64992.1 (hypothetical protein Csa_1G172630 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 9.0e-17 Identity = 42/50 (84.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. NCBI nr
Match: XP_011654767.1 (PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 9.0e-17 Identity = 42/50 (84.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. NCBI nr
Match: XP_011654769.1 (PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X2 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 9.0e-17 Identity = 42/50 (84.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. TAIR10
Match: AT5G47690.3 (binding) HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17 Identity = 40/80 (50.00%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of CsGy1G013660 vs. TAIR10
Match: AT5G62670.1 (H(+)-ATPase 11) HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of CsGy1G013660 vs. TAIR10
Match: AT3G47950.1 (H(+)-ATPase 4) HSP 1 Score: 55.1 bits (131), Expect = 5.5e-08 Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0
BLAST of CsGy1G013660 vs. TAIR10
Match: AT3G60330.1 (H(+)-ATPase 7) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05 Identity = 21/56 (37.50%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of CsGy1G013660 vs. TAIR10
Match: AT4G30190.2 (H(+)-ATPase 2) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05 Identity = 18/37 (48.65%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of CsGy1G013660 vs. Swiss-Prot
Match: sp|Q9LV11|PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=AHA11 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.5e-07 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of CsGy1G013660 vs. Swiss-Prot
Match: sp|Q9SU58|PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=AHA4 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 9.9e-07 Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0
BLAST of CsGy1G013660 vs. Swiss-Prot
Match: sp|Q08436|PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia OX=4092 GN=PMA3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CsGy1G013660 vs. Swiss-Prot
Match: sp|Q08435|PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia OX=4092 GN=PMA1 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CsGy1G013660 vs. Swiss-Prot
Match: sp|P22180|PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum OX=4081 GN=LHA1 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.9e-06 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CsGy1G013660 vs. TrEMBL
Match: tr|A0A0A0LSQ4|A0A0A0LSQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G120440 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. TrEMBL
Match: tr|A0A1S4E4A6|A0A1S4E4A6_CUCME (LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A OS=Cucumis melo OX=3656 GN=LOC103501732 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 7.1e-18 Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. TrEMBL
Match: tr|A0A0A0LW18|A0A0A0LW18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172630 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 6.0e-17 Identity = 42/50 (84.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of CsGy1G013660 vs. TrEMBL
Match: tr|M5WQQ9|M5WQQ9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa000138mg PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16 Identity = 41/56 (73.21%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of CsGy1G013660 vs. TrEMBL
Match: tr|A0A251PFA9|A0A251PFA9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G003600 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16 Identity = 41/56 (73.21%), Postives = 52/56 (92.86%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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