CSPI01G13640 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATTCTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGTCCAGGCATATGAACTAGTATATAGGTAAGCTTATATCTCAATATCACTTATATTTATTCGGTGGTATATATGTTAGAAAAGAGCTCAATGAGAAATATATATATATAGAACTAATAATATGCTGTAAATTTGGTAAGTTTAGAAAAGTATACCCATCCCTGTACATAAGTGGTTTAGTGAGATTGATTACGAACTCTGTGTTATTGAATTATTTATTTTTTATCTTTTTTTTTTTTTTTTGGTATTAAGTTTGATGAAAATTTTGTAAAGTTCGATGAAAATATTTGTAAAGATCTGCAAATATAGACATGAAGCCATTTTGGTGTTTGGCTGTTTGTTTTGGTTGCGTTCTCATTTTCTTTAACTGCAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTAAGGCTGCTGAGGAAAGGCTGAAGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGTGA ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATTCTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGTCCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTAAGGCTGCTGAGGAAAGGCTGAAGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGTGA ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATTCTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGTCCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTAAGGCTGCTGAGGAAAGGCTGAAGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGTGA
BLAST of CSPI01G13640 vs. Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of CSPI01G13640 vs. Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07 Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 1
BLAST of CSPI01G13640 vs. Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.4e-07 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of CSPI01G13640 vs. Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.4e-07 Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of CSPI01G13640 vs. Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of CSPI01G13640 vs. TrEMBL
Match: A0A0A0LSQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G120440 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.9e-45 Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of CSPI01G13640 vs. TrEMBL
Match: A0A0A0LW18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172630 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.1e-16 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of CSPI01G13640 vs. TrEMBL
Match: W9QL19_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010621 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.4e-15 Identity = 36/48 (75.00%), Postives = 45/48 (93.75%), Query Frame = 1
BLAST of CSPI01G13640 vs. TrEMBL
Match: A0A061GHF7_THECC (Androgen induced inhibitor of proliferation / pds5 isoform 2 OS=Theobroma cacao GN=TCM_030447 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.5e-15 Identity = 35/48 (72.92%), Postives = 46/48 (95.83%), Query Frame = 1
BLAST of CSPI01G13640 vs. TrEMBL
Match: A0A061GGJ0_THECC (Androgen induced inhibitor of proliferation / pds5 isoform 1 OS=Theobroma cacao GN=TCM_030447 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.5e-15 Identity = 35/48 (72.92%), Postives = 46/48 (95.83%), Query Frame = 1
BLAST of CSPI01G13640 vs. TAIR10
Match: AT5G47690.3 (AT5G47690.3 binding) HSP 1 Score: 80.9 bits (198), Expect = 4.7e-16 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 1
BLAST of CSPI01G13640 vs. TAIR10
Match: AT3G47950.1 (AT3G47950.1 H(+)-ATPase 4) HSP 1 Score: 54.7 bits (130), Expect = 3.6e-08 Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 1
BLAST of CSPI01G13640 vs. TAIR10
Match: AT5G62670.1 (AT5G62670.1 H(+)-ATPase 11) HSP 1 Score: 54.3 bits (129), Expect = 4.8e-08 Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of CSPI01G13640 vs. TAIR10
Match: AT3G60330.1 (AT3G60330.1 H(+)-ATPase 7) HSP 1 Score: 46.6 bits (109), Expect = 9.9e-06 Identity = 21/56 (37.50%), Postives = 36/56 (64.29%), Query Frame = 1
BLAST of CSPI01G13640 vs. NCBI nr
Match: gi|700209732|gb|KGN64828.1| (hypothetical protein Csa_1G120440 [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 2.7e-45 Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of CSPI01G13640 vs. NCBI nr
Match: gi|659127303|ref|XP_008463634.1| (PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 5.3e-17 Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of CSPI01G13640 vs. NCBI nr
Match: gi|700209896|gb|KGN64992.1| (hypothetical protein Csa_1G172630 [Cucumis sativus]) HSP 1 Score: 92.4 bits (228), Expect = 4.5e-16 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of CSPI01G13640 vs. NCBI nr
Match: gi|778659622|ref|XP_011654767.1| (PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Cucumis sativus]) HSP 1 Score: 92.4 bits (228), Expect = 4.5e-16 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of CSPI01G13640 vs. NCBI nr
Match: gi|778659626|ref|XP_011654769.1| (PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X2 [Cucumis sativus]) HSP 1 Score: 92.4 bits (228), Expect = 4.5e-16 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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