CsGy1G013600 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G013600
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 9079534 .. 9085429 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAATATTAGTAGTGGAATAGGGTTGCATGCTGATCAAGGTGGTCACTGACGAAATTATCGAAAATGACAAACGAAGGTTGGCCTGCAACGGTCACTAGATGTGGCATCTGAAAGTTGATGGACGAACTTTCTAAATTAAATTAGGAAAAAAGTAAACAGTAACTCGTGGGTTCAAATAATGTTTATTATTCAAACTCGTGAGAAAGTTAGTAGGAAGCTCAAGATTCTAGAATTGTATTTGTTATTGAAAATTTGTCACTAATTCTTTCATTCATTTGTCAGTAACTTTATCAAAATTTATAATTGTATTTTCTTTTAGTTATTGAAACATATGATTGTTGAACCTTTTTTTTAATAATGACTTATAATTGAAAAAATTAAATGTAAATTAAAAGCATCTTTTAATAACCAAGTTACATTCAATTAAAAGATAAAAGAAAATCAATAATGTGTTCCACAATCCAAACGTCGTCGATTTCGAGCTAGTTGTTGTCGTCGACTCTGAAATCTATGTTGTTCTGGCTCCTCTTGGTTGTCTAATTTTTGTTGGTACTATGTCGATCTGATATCTCTATAGGTGCTTCATAGTATAAATATTCGTTAAGTTCTCAATAGCCATGTATGTGCCATGCATGTAAGAAGTTGATGGATCGGCATTCATGTATGAAGACAATGTACCGATTTCTTAATCATAATATCATGTACCGACTTCAGAATCACCATATCCTGTTTCAAATGTTTGCATCATCATCATCGGGCTACCATAACCAGTTTCTGTCATGTGAGGCACTTCTTCCACATTATGGTAAACTTTATCGAGTTCAGCTTCTTTCACTCAGACACGTCCCCTATGAACTAGTGGAGATACAATAGGTAGATCGTACATATTATGTATCTCTTCCATGTACCTCTTATTATTATAACATATATCAAGGACTTGTTATTGATCATCTGCAATGTACAGGGAGAGAACTCACCTCTTTATGCAATTAGGAGACTTCTTATTAATTAATTCTCTAGTTAGTTAATTACTAAATTAAATCTAGATATTTAGTTCAATCTAAATTTGAATCATATTCAAATATAAATTTCTCTCATAAGCTATAGTTTTAGTGTGTATCATATACATATTAAATTTTAACCTATAGTTTTAATATGAATATAATTCACATTAAACTAATATTTGAACTCATTCAAATATTTTATCTCTCATAAATTAATTTTGAATCATATCTAAAATCATATCTATATAGTAAAGTTTAATTAAGATATAAACATTTCAAATTACAACCAATAGAAATAAATGTCATTATCCTTTACGAGCTAGGAAGTGAACCTAATGGACCTACATATCAGAAGCTACAACGATATGAAATTAATTGGCTAAATTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTACACTCTACTAAAGACTCAGTTGAACTATTCTCACTGTAGATATATTTTTGTGTCCACAGATATAGACCAATAACAATAAGTTAGTCCTTCGCGAGTGTTCATAACACTAGCTGGGTCAAATTATCATTTTACTTCTAGGTAACTTCTAGTCTTTAAATATCAGTGCTCCTCTAATGAACAACGGTTCAACTTTGAGACCTGGGACTCTCCCCTCACCTACACTTGGGATTCGCACTCATCAATATCACGTGAGTTACCTGGGATCTTCACTAGCATTCAGCCTTACGAATACATCACAACTCACAACCACGCGAATTCAATAAAAGAGCAGTCAGCTCACCTCCTACTCTTAGCAAAAATTATCATAGATTAGTAAGGAACCGTTGCTTCAACGTTCTGAACTTTTTCCTCTCACTTTCATAAAAAATCTATTACTTTTTAGGCAAAACACTTTTTCTTTTCTTTTGGCTTCCGGCCCTATTTATAGAAGTCTTTCACCTCTAAGGGTTGCTTCCATGCCTTACATGTGTTACCTTTCTATCACGTCGTACTATGCCATGAACCTAAACTCAATACGTACTCTATCCATCAACAACGATTTAACTTTCCCTTTGAGATGTGCACCCTATCTCTTTGGGAAGCCAAACTCTAAATTGTTTGACTGTCCTTTTCTCTTCTCAAAAAGTCATTGTCATTTCCTTTCCCACGGTGAGTTATCAAGTCACTTTAAAAAGACATACTTCTTCACTTTAATCTCTTGGTTCAGATACTCCTTCTCACAGTATCCTATCAAACGCCTAGCTCTTGGTGCTTAACGCAATACCTTCCTTACTATTCTTCCCCATCACGTTGCTTACCTTCACACGATAAAATCTTTTGGCTTACGCCTTTCTCTTTCCATCACCTAATCTCTTTTTGCACCATTTCTTTTGGGATGTCTTGACACTTATCCGCAACAACCTTCCAATAAGAGTCATTCACCACAAGCGTTCCTTTTTCGAATTAGGGCCTCACATTTGATTTATCTTCACTTTCTGTCAAGCCGCAAGTCTCCTCTATTAAAGCTCCATCCAGTCCTTGTCGAAGAACGTAATCAAGTTGTGCGCATTTACCATTCGAGTCGAGCTCTCCTTGGACCCACCTTCTTTAGCCGAGCTGCAAGCTAAATTTCCCCATCTTTTAAGCCAGTTGAGCCATTTTGTATTGTTTTTCTTAGTGTGTTTTGATTGGCTTTTTGGTATGCCCATCAAATATGAATTTTTGTGCTAAGTAAATTAATTTTTGGATTTAAAGACTAGTTTATTTTTTTAAGGTTGTTGACGAACTTTTTGCAATTGTGGAATTTCTTTCAACCAAGATTGAATTGGATTCAACCTCGGTTTTAATTAAGTTTGGAAACATATGATAAATAATTCGATGACTGGTTGACAAAATTATTGATTTAATTTTGTTTGTTTAATTTTGACTATCAACCAAGGACTGGTAGTTAATCTCGAGGTAAGAGATTGTACTACTAGACCTCAAATGAAAATGAAATTAAAGGGCTTGCGTGCATTTAATTTCTGTTATGCATTGATGTAGCTAAGATGCATATTGTGATATAGTTGCTCACTGATATGTTTATGATGTATGATATATTAATCACATGATTAATAATTTTATGATTGATATTCATGTTATGTTTATGATATTTAAGATATTGCTACATGGTATGGACAGTGATGTCCCGTTAAATTTGGCAATTAGGGTTGTACATGTCTGGTGTCCTTCGAGATCACTAGATTGCATGTGTTTCATTGGACACATGATAGTTTTGGGTACCTTCTCACGAGATCCTAATGAAAAATTAACAAACACGTAGCGGGACTAGTAGTGGGTCCCTTACTAAGTATATGTTTATATACTCACTCTTTTCTATGTTCAAATTTTCTGGCAAAGATAGAGGTAGAGGAAACCTGACAAATGACAAGAAGAGTATGTGACTTGTCATAGGGGAATTATATTACTTCCGTCTTTCATATTTACATAATTTTTATTTTTATTTTTTTATTTTTTTATTTCAGAATTTAGTTTTTCTCTTTTCCCTCTATATGAAAAAGTTATTTATTTTAATTGTGATGATCTCAGCTTAGTATAAGAAGTTAGGTCGTTATAATATACAATTGAAAAATCAATGTTATATTTTTGTATCGATCCAACTTTTCAAATTAAGTCGAAGTTATTATTTTAAACAAAAATACTTTGATTTACACGAAATACGATAGAATTTGTTTGAAACAATCGTTATCAAAGAACTTCATTCGAGCCATATTTTAATCAAAATAAATTTTCTAAAGTATCGTTTATAAATTACTTAAAAACAAACCATCCTAAACATGAAACTCATTTTAAATCCTCAAAAACTGGAAAACAGTAAAAACACTAAACGAAAGCAATTTTGAAAGTAAATTCCCCTATGTCGATCACATGTCCTTCTTGTTCCTTGTCGATCAACCTCTCATATCACCTTTGCCTGAAAAGTAAAACATAAAAGATGAATATAAATATATCCAGTAAGAGACCCATTGTTGGTCCCGTTAGGGGTGAAAAACTATTAACTTTCTATTGGCAGATACCCTACATCATAACATTCTCGTGATGTCGTAGGATGCACATAATCAATCTAATGTCTCCAAAGGATACACCTATCAATCTAGTGCTCCCAAAGAATGCACAACAGGTGGTGATCATGTGGGACATCTACAAGGCGCACTACCCCATGATTCAAAATCCTTATAGTCGATGATGAGGTCGAAATCTTATATTTGTTACATTGTTTTTCATACTTGTGTGTTAATTTTTAACATATTTTTTCTACATTGTCTTCTGTGATTTGTTCCGTTTTTGCTGACTTAATTTAATTTATTTTCCTCTGTTTATGCTGGCTTAATTTATTCTTTATGTTTATGCTAACTTAATTTATGTTTCTATGTTTGTGATGGCTTAATTTATTTTCCTCTTTTTATGTTGACTTAATTTATTTTCCTCTCTTTATGGTGGCTTAATTTATTTTCCTCTGTTCTCACCATTTTTTTATATTTGCTGAGTATGCTAGGATTATTTGAGTGAAATGCTTTTTTTCCATAATCTCATTTCTTTTTCCTTTCGGCATGTTTCTGTTATGATAATTATTACTACTTTGCTCATAATTTTTTTATCATGTTGCTTCAATCCTTGTTTATTTTATGTTTTTTTCGTTTCCTTATAATATTGTTTAGGCTCATGAAAAAATAATGTGTTACTTGGTTTCCTTTGCTCAAAATCCTTGTTCAGTCCATATTTCAAAACCTATTGTGTACTTATGGGTCATATTTTACACAGACTTGTCTCCTCCTATTGTGTACTTATGTTATTAGGTCTCCTCCTATTATGTACTTATGCTATTAGGTCTTTCTTTTGACTGCCATTTTTGCTTGTGATATGGGTCAATTCCTTCTTTGCTTCCGATATGGGCATATCCCTTATTCCTCTTGGGATATTGTTGGCTCTTTACTGCTCCAAATCTTCATTACAACATTAAATACTCTCATTCCCTCTGTTATAAATATGTTATTCCATTTTCTCATTTCATTTCATCCTTGCTCTTTCTGCACATACAACCTTTTTACACTTTGGTATGTTTACCATTCTTCATTCACATGGTTGCTTAAATCGATGTCCATGTTCAGTTCATCTTATACAACACAATTTTTACTTGCATGTTAGAATTGTATTTATTACATTTTCAGTTACTGTTGTTGTGCTTATTACTGCTTCCACTTCAATGTTAGTTTTAAAAGAAAATAAAATATGTTACTATCTTTTTCTTCTTTTTTTTTGCACTAGGTTCGATCAAGCTAATCTTTGAAGTTGTCTATGTTATTTCTTTGAATCCTTGATCGGTCACCACTTCCATTCAAATGCATTTAAAAAAAAAATCTTCTTTTCATGGTATTTTGTTGCTGCTTTCTTTGCATTGAGTGTTTGAAGACATCTTGTCATACATGAAATTCAAGGTCAATTTATAGGACGAATTTCAATCCTCTTAGGCTATTTTTTTTTCCTACTTTTTTACTTGCTGGCTCTTTAGTTGGTCCTTCAGGGTTTTATAGTTTTATGCAATTGTGAGGGTTAATTCCGGTCTTTGTTGTGGGTATGTCATCTCAACTTTTCTTTTCTTGTTTCTATCCAACTAGGATTCATTTACATTTATTTTTGTTATTCATCTCTTCAGGTCGCTCGAGTTCAAAATTACTATCAACTGAGGTACTAG

mRNA sequence

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGTTACTGTTGTTGTGCTTATTACTGCTTCCACTTCAATGTTCGATCAAGCTAATCTTTGAAGTTGTCTATGTCGCTCGAGTTCAAAATTACTATCAACTGAGGTACTAG

Coding sequence (CDS)

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGTTACTGTTGTTGTGCTTATTACTGCTTCCACTTCAATGTTCGATCAAGCTAATCTTTGAAGTTGTCTATGTCGCTCGAGTTCAAAATTACTATCAACTGAGGTACTAG

Protein sequence

MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRLLLLCLLLLPLQCSIKLIFEVVYVARVQNYYQLRY
Homology
[Close]
BLAST of CsGy1G013600 vs. NCBI nr
Match: KGN64821.1 (hypothetical protein Csa_1G119390 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRLL 56
          MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLR++
Sbjct: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVM 55

[Close]
BLAST of CsGy1G013600 vs. TrEMBL
Match: tr|A0A0A0LXV9|A0A0A0LXV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119390 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRLL 56
          MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLR++
Sbjct: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVM 55

The following BLAST results are available for this feature:
BLAST of CsGy1G013600 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64821.12.1e-2496.36hypothetical protein Csa_1G119390 [Cucumis sativus][more]
BLAST of CsGy1G013600 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G013600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G013600 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LXV9|A0A0A0LXV9_CUCSA1.4e-2496.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119390 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013600.1CsGy1G013600.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G013600Csa1G119390Cucumber (Chinese Long) v2cgybcuB001
CsGy1G013600CsaV3_1G013790Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G013600Cucumber (Gy14) v2cgybcgybB017
CsGy1G013600Cucurbita maxima (Rimu)cgybcmaB061
CsGy1G013600Cucurbita maxima (Rimu)cgybcmaB110
CsGy1G013600Cucurbita moschata (Rifu)cgybcmoB057
CsGy1G013600Cucurbita moschata (Rifu)cgybcmoB104
CsGy1G013600Cucurbita pepo (Zucchini)cgybcpeB082
CsGy1G013600Cucurbita pepo (Zucchini)cgybcpeB090
CsGy1G013600Bottle gourd (USVL1VR-Ls)cgyblsiB041
CsGy1G013600Melon (DHL92) v3.5.1cgybmeB010
CsGy1G013600Melon (DHL92) v3.6.1cgybmedB009
CsGy1G013600Watermelon (Charleston Gray)cgybwcgB035
CsGy1G013600Watermelon (97103) v1cgybwmB012
CsGy1G013600Wild cucumber (PI 183967)cgybcpiB001
CsGy1G013600Silver-seed gourdcarcgybB0342
CsGy1G013600Silver-seed gourdcarcgybB0449
CsGy1G013600Watermelon (97103) v2cgybwmbB034
CsGy1G013600Wax gourdcgybwgoB015
CsGy1G013600Wax gourdcgybwgoB046