CsaV3_1G013790 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G013790
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 9084810 .. 9084989 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAA

mRNA sequence

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAA

Coding sequence (CDS)

ATGGGACGAACAGCAACAGCTTGGAAAAAATGGGCAACATGGGACGAAGCTCACTTGACTGGATGGAGGTCTTTGACTTCATCTGAGCAAGCGGTGAACAATGAAGAAATCGGTGAATGTTGGACGATCAACGACGAGGGACGGTGGCAGCAACTTAGGGTAATGCGAGAGGAAGAATAA

Protein sequence

MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE
BLAST of CsaV3_1G013790 vs. NCBI nr
Match: KGN64821.1 (hypothetical protein Csa_1G119390 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-27
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 60
          MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE
Sbjct: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 59

BLAST of CsaV3_1G013790 vs. TrEMBL
Match: tr|A0A0A0LXV9|A0A0A0LXV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119390 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-27
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 60
          MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE
Sbjct: 1  MGRTATAWKKWATWDEAHLTGWRSLTSSEQAVNNEEIGECWTINDEGRWQQLRVMREEE 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64821.11.8e-27100.00hypothetical protein Csa_1G119390 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LXV9|A0A0A0LXV9_CUCSA1.2e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119390 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013790.1CsaV3_1G013790.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G013790CsGy1G013600Cucumber (Gy14) v2cgybcucB002
The following gene(s) are paralogous to this gene:

None