CsGy1G013180 (gene) Cucumber (Gy14) v2

NameCsGy1G013180
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRING/FYVE/PHD zinc finger superfamily protein
LocationChr1 : 8550876 .. 8553736 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAGTCAATAGTAAATGAACTAACCATTGCAAGTTAAGAAACCCAACTGAAAGTCGCAGAAATAAAAAGCTCTAATCATAGTACTTTTAAAAGCAGTAATATGATAGTATCAATAAGAGTTAGAAAAGCTTACAAATCTGGTAGCTTCGATTGCTTATAAGACAGTAACAATTGATATTTTCTGCTACTTCCCTTTGCTTTCTTCTCTGGGTTTACATGAAAGTGTCACTTTCGCTACAAGGAGGAGGGGCTTGTGATGGGGGTGTGCCACACTGGATAATACCCCTTCCTCTCGCAAATTCTTGTCTTGTCTATACAAACAACAAGTGGGAAAAGCTTATTTCAGACAGTAAGTTGAAATTCCGTGTAGTTGTCAGTCTCCCTTGCTTCATCCTAAAGAAAGGCAACAATCTGATTCTCTCCCTTTTAATCTTTTAAACTCTTCTATCATTTGTTCCATACTCGTTTCATCTAACCGATCTCAAGATTATTTGAAGCAGCAGTTCAATTACCTTAGGACTCCCAGCTTCCTTCTCACTATTCAATTACCTTGGCAAATTCCATGATATGTAAACTTGTTCGTGGAGACCAAACATCGATATGATTGAACAAAATGAAGGATCAAGTGGGATAACAAGCCCAGATGAACCTAAGACAATTGTTGCATCGCCGTCGAGACCTCGTGAAGCGAAAGGGGTAATTGGAGGGGAAGGTGGGACCTGTGTGCGTGAGAATGAGGAGAATAGAAAGAGGCATGGAGTGGAGATGCTAGAGACCAGCTCACAGCCAGAGAGTCATCAAAACTGCATCATTGATATAAAAACCAATGGAGAGTCAGTGGATGATGAAGATTCTAGTGAAGAAAAGGTTTGCAGGATATGTCATTTGGGCTCCGAAAACGAGTCGATAACTTCAGAACTCATACACCTCGGGTGTAGCTGCAAAGATGAGCTTGGAATATCACATCGTGACTGCGCCGAGATTTGGTTTATGCATCGAGGCAACAGGTAAAATTCCTATGACGATCTTCATCCTCTCCTCTCTTCACAGTTTCCAATAACAGATATGGTGCTCTTAATATAACTCCAATTCTGTATCATCCCTTTCTAATGGTAGACAATGTGAGATTTGTGGTCAGACTGCAACAAATGTGAGGAGAAACAGGAGTAGCCATTTTGCAATACATCGGAATGAGAGGAGATTGGTAGCAAGCTCAACAGTGTCGACAGTGTCCTTGGACAATGAGGTTTCATTATCCTGTTGCTGGGGGCAGCGCTTCTGTAATTTCCTATTAACATGTACAGTTCTAGCCTTCCTCCTCCCATGGTTTTTTCGTGCCGATTTCTTTGGATGATGAGCGATGGTCTTTCTCAAACATCCTATCATCACATTAATCAGCTACAAAGATTCCAGACGTGCAATCCCGGACCTGGGAATAAGCAGATGCAACAGTTTCACACAAGGAAGAATTGACAAACATGTACATATATAGAACAGTGCATATAAAAATGCTAACTCACAATAATTCTATATCAAGAGTAAGAAAATTGAAAATAGTTAGCCAGAGAGAGAGAGAAAGAGATTGCAATGCAAACAATAGAAATGGTTATAATTTACTAAACTATTTACCCTTTCCATATTAAAATGTATTTTCTAAGTCATGTCTTTGTCGAGGCATCAAACAAAAAGGCAGGCACTAAGCATAGAGATTAAAAAAATAGATCTTTATATGGCGGATCCTGCTTTTCTAGTTTCTAACCATAATCACCTAGCATCTTAAATGAATAGCTATATTACAATTCAAGTAAATTAGTCCATTTAAAAGAGATTAAAAAGAAAAAATAAATAAATTTCTGTTATACTTGTGATGTTTTCCGAAGATATTGAAAGCAAGGAATTAGGAGGATACATTTGAGAAAAGAAAAGTATATATGGACAATTCGAAGTGTCATAAAGTTTACAGAATAGCCTTAGTGAGCTCGGGATATTAAAGATGAATGAAATAGAGGAAATTACTCTAAAACAACAAAAAATGATTAGCATGTTTAAAAATGACTCTAAAGTCTAAGCCATGTCTTAAATCTCAAATCAATTTAGATACGAGTTTCATGCCATCAGAACTAATTCTAAAAGATTAAAAGCATGTTCTGGAGTGATTTTGAACCTAACAAATGTGACGTTAACCATTTTAATTAAAAGCATCCTCCAACAGCACAAGCATGGCATTTCAAATTGAAGAAAATATGACAAACTCTAGAGATTATTTATCCTATTCTCGATATAAACTATATTTACAATAGGCATACAGTATTTTTATAAAAACACAACAACAACACTAGGCAAACGATACTTGTGCTTTCTTCAAATTAACCTTGAGATTTGACAAGTTTTAAGTGATAAAAAAAAAAGCTGCCAATTCAGTAAGTGAATGAGAGAAAAGCCATTTTGCAGATGGAAATGTATGAAGGCAGAAATAAAACAATTGGATTAGCAAAGATGTGAAAGGCATTATTCCTAGATAGAAAAACAAGCAGAAGCTTAAAAAAATGATGATAAATTAAACATAGAGAAACAGCAAAAGTCAGTTGAATCATTGGATAGATTGATTCCAGGATGAAAAATTAATTTGGGCAAAATGGGCAATCTCATGGAAAGAGATCAAGAATTGATGATTGATCCCTAAAGTAAAATTAGGCCTCTGTAGAAAAAAGCATTAAATTTCACCTCTTCATCAAGATTCAACCTATCTCGCGTGCTTCTTCTCAGTACCCTCGACGGCGGCTGCGACGAGCGACGGCTTCGTCTTCAAACAACGACTACGAGAAACTACGACTTCGATTAGAAGGACAAGAGATTGTTT

mRNA sequence

TTAAGTCAATAGTAAATGAACTAACCATTGCAAGTTAAGAAACCCAACTGAAAGTCGCAGAAATAAAAAGCTCTAATCATAGTACTTTTAAAAGCAGTAATATGATAGTATCAATAAGAGTTAGAAAAGCTTACAAATCTGGTAGCTTCGATTGCTTATAAGACAGTAACAATTGATATTTTCTGCTACTTCCCTTTGCTTTCTTCTCTGGGTTTACATGAAAGTGTCACTTTCGCTACAAGGAGGAGGGGCTTGTGATGGGGGTGTGCCACACTGGATAATACCCCTTCCTCTCGCAAATTCTTGTCTTGTCTATACAAACAACAAGTGGGAAAAGCTTATTTCAGACAGTAAGTTGAAATTCCGTGTAGTTGTCAGTCTCCCTTGCTTCATCCTAAAGAAAGGCAACAATCTGATTCTCTCCCTTTTAATCTTTTAAACTCTTCTATCATTTGTTCCATACTCGTTTCATCTAACCGATCTCAAGATTATTTGAAGCAGCAGTTCAATTACCTTAGGACTCCCAGCTTCCTTCTCACTATTCAATTACCTTGGCAAATTCCATGATATGTAAACTTGTTCGTGGAGACCAAACATCGATATGATTGAACAAAATGAAGGATCAAGTGGGATAACAAGCCCAGATGAACCTAAGACAATTGTTGCATCGCCGTCGAGACCTCGTGAAGCGAAAGGGGTAATTGGAGGGGAAGGTGGGACCTGTGTGCGTGAGAATGAGGAGAATAGAAAGAGGCATGGAGTGGAGATGCTAGAGACCAGCTCACAGCCAGAGAGTCATCAAAACTGCATCATTGATATAAAAACCAATGGAGAGTCAGTGGATGATGAAGATTCTAGTGAAGAAAAGGTTTGCAGGATATGTCATTTGGGCTCCGAAAACGAGTCGATAACTTCAGAACTCATACACCTCGGGTGTAGCTGCAAAGATGAGCTTGGAATATCACATCGTGACTGCGCCGAGATTTGGTTTATGCATCGAGGCAACAGACAATGTGAGATTTGTGGTCAGACTGCAACAAATGTGAGGAGAAACAGGAGTAGCCATTTTGCAATACATCGGAATGAGAGGAGATTGGTAGCAAGCTCAACAGTGTCGACAGTGTCCTTGGACAATGAGGTTTCATTATCCTGTTGCTGGGGGCAGCGCTTCTGTAATTTCCTATTAACATGTACAGTTCTAGCCTTCCTCCTCCCATGGTTTTTTCGTGCCGATTTCTTTGGATGATGAGCGATGGTCTTTCTCAAACATCCTATCATCACATTAATCAGCTACAAAGATTCCAGACGTGCAATCCCGGACCTGGGAATAAGCAGATGCAACAGTTTCACACAAGGAAGAATTGACAAACATGTACATATATAGAACAGTGCATATAAAAATGCTAACTCACAATAATTCTATATCAAGAGTAAGAAAATTGAAAATAGTTAGCCAGAGAGAGAGAGAAAGAGATTGCAATGCAAACAATAGAAATGGTTATAATTTACTAAACTATTTACCCTTTCCATATTAAAATGTATTTTCTAAGTCATGTCTTTGTCGAGGCATCAAACAAAAAGGCAGGCACTAAGCATAGAGATTAAAAAAATAGATCTTTATATGGCGGATCCTGCTTTTCTAGTTTCTAACCATAATCACCTAGCATCTTAAATGAATAGCTATATTACAATTCAAGTAAATTAGTCCATTTAAAAGAGATTAAAAAGAAAAAATAAATAAATTTCTGTTATACTTGTGATGTTTTCCGAAGATATTGAAAGCAAGGAATTAGGAGGATACATTTGAGAAAAGAAAAGTATATATGGACAATTCGAAGTGTCATAAAGTTTACAGAATAGCCTTAGTGAGCTCGGGATATTAAAGATGAATGAAATAGAGGAAATTACTCTAAAACAACAAAAAATGATTAGCATGTTTAAAAATGACTCTAAAGTCTAAGCCATGTCTTAAATCTCAAATCAATTTAGATACGAGTTTCATGCCATCAGAACTAATTCTAAAAGATTAAAAGCATGTTCTGGAGTGATTTTGAACCTAACAAATGTGACGTTAACCATTTTAATTAAAAGCATCCTCCAACAGCACAAGCATGGCATTTCAAATTGAAGAAAATATGACAAACTCTAGAGATTATTTATCCTATTCTCGATATAAACTATATTTACAATAGGCATACAGTATTTTTATAAAAACACAACAACAACACTAGGCAAACGATACTTGTGCTTTCTTCAAATTAACCTTGAGATTTGACAAGTTTTAAGTGATAAAAAAAAAAGCTGCCAATTCAGTAAGTGAATGAGAGAAAAGCCATTTTGCAGATGGAAATGTATGAAGGCAGAAATAAAACAATTGGATTAGCAAAGATGTGAAAGGCATTATTCCTAGATAGAAAAACAAGCAGAAGCTTAAAAAAATGATGATAAATTAAACATAGAGAAACAGCAAAAGTCAGTTGAATCATTGGATAGATTGATTCCAGGATGAAAAATTAATTTGGGCAAAATGGGCAATCTCATGGAAAGAGATCAAGAATTGATGATTGATCCCTAAAGTAAAATTAGGCCTCTGTAGAAAAAAGCATTAAATTTCACCTCTTCATCAAGATTCAACCTATCTCGCGTGCTTCTTCTCAGTACCCTCGACGGCGGCTGCGACGAGCGACGGCTTCGTCTTCAAACAACGACTACGAGAAACTACGACTTCGATTAGAAGGACAAGAGATTGTTT

Coding sequence (CDS)

ATGATTGAACAAAATGAAGGATCAAGTGGGATAACAAGCCCAGATGAACCTAAGACAATTGTTGCATCGCCGTCGAGACCTCGTGAAGCGAAAGGGGTAATTGGAGGGGAAGGTGGGACCTGTGTGCGTGAGAATGAGGAGAATAGAAAGAGGCATGGAGTGGAGATGCTAGAGACCAGCTCACAGCCAGAGAGTCATCAAAACTGCATCATTGATATAAAAACCAATGGAGAGTCAGTGGATGATGAAGATTCTAGTGAAGAAAAGGTTTGCAGGATATGTCATTTGGGCTCCGAAAACGAGTCGATAACTTCAGAACTCATACACCTCGGGTGTAGCTGCAAAGATGAGCTTGGAATATCACATCGTGACTGCGCCGAGATTTGGTTTATGCATCGAGGCAACAGACAATGTGAGATTTGTGGTCAGACTGCAACAAATGTGAGGAGAAACAGGAGTAGCCATTTTGCAATACATCGGAATGAGAGGAGATTGGTAGCAAGCTCAACAGTGTCGACAGTGTCCTTGGACAATGAGGTTTCATTATCCTGTTGCTGGGGGCAGCGCTTCTGTAATTTCCTATTAACATGTACAGTTCTAGCCTTCCTCCTCCCATGGTTTTTTCGTGCCGATTTCTTTGGATGA

Protein sequence

MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETSSQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG
BLAST of CsGy1G013180 vs. NCBI nr
Match: XP_011653704.1 (PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X1 [Cucumis sativus] >KGN64779.1 hypothetical protein Csa_1G096610 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 2.5e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60
           MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS
Sbjct: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60

Query: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120
           SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI
Sbjct: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120

Query: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180
           SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV
Sbjct: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180

Query: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 215
           SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG
Sbjct: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 214

BLAST of CsGy1G013180 vs. NCBI nr
Match: XP_008463280.1 (PREDICTED: probable E3 ubiquitin ligase SUD1 [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110
Identity = 202/214 (94.39%), Postives = 208/214 (97.20%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60
           MIEQNEGSSGITSP+EP+TI ASPSRPREAKGVIGGEGGT VRENEEN KRHG EMLE S
Sbjct: 1   MIEQNEGSSGITSPNEPETIAASPSRPREAKGVIGGEGGTYVRENEENSKRHGEEMLE-S 60

Query: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120
           SQPES QNCIIDIK+NGESVDDEDSSEEKVCRICHLGSE+ESITS+LIHLGCSCKDELGI
Sbjct: 61  SQPESRQNCIIDIKSNGESVDDEDSSEEKVCRICHLGSEHESITSDLIHLGCSCKDELGI 120

Query: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180
           SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASST+STVSLDNEV
Sbjct: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTMSTVSLDNEV 180

Query: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 215
           SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG
Sbjct: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 213

BLAST of CsGy1G013180 vs. NCBI nr
Match: XP_022147939.1 (uncharacterized protein LOC111016745 [Momordica charantia])

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 159/216 (73.61%), Postives = 174/216 (80.56%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENR--KRHGVEMLE 60
           MI+Q+EGSSG  + DE  T++A P RP+EAK V GG     V+ + EN   KRHG E   
Sbjct: 1   MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGG----VVQNHNENEAGKRHGEE--- 60

Query: 61  TSSQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDEL 120
                ESH NCIIDIK++GESVD EDSSEEKVCRICHL SE++SI S+LI LGC CKDEL
Sbjct: 61  ---SKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLIQLGCRCKDEL 120

Query: 121 GISHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDN 180
           GISHRDCAEIWFMHRGNRQCEICGQTATNVR  RS  F I RNERRLVASSTVSTVSLD+
Sbjct: 121 GISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDS 180

Query: 181 EVSLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 215
           + SLSCCWGQRFCNFLLTCTVLAFLLPWFFR DFFG
Sbjct: 181 DDSLSCCWGQRFCNFLLTCTVLAFLLPWFFRLDFFG 206

BLAST of CsGy1G013180 vs. NCBI nr
Match: XP_023530414.1 (uncharacterized protein LOC111792994 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 148/213 (69.48%), Postives = 171/213 (80.28%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60
           MIEQ EGSS  TSPDEP+ ++ SP+RP EAK V+          +E + +  G    ++S
Sbjct: 1   MIEQEEGSSRTTSPDEPEIVIVSPTRPEEAKEVLA--------RSERSDEHEGAG--KSS 60

Query: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120
            QPESH  CIIDIK+ GES+DD +SS EKVCRICHL S+ ES++S+L++LGC CK ELG+
Sbjct: 61  RQPESHHTCIIDIKSTGESMDDANSSNEKVCRICHLSSD-ESVSSDLVNLGCRCKGELGM 120

Query: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180
           SHRDCAEIWFMHRGNRQCEICGQTATNVR NRSS F I RNERR+VASS+VS VSLDNEV
Sbjct: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRGNRSSVFMIQRNERRMVASSSVSAVSLDNEV 180

Query: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFF 214
            LSCCWGQRFCNFLLTCTVLAFLLPWFFR +FF
Sbjct: 181 PLSCCWGQRFCNFLLTCTVLAFLLPWFFRFNFF 202

BLAST of CsGy1G013180 vs. NCBI nr
Match: XP_022988953.1 (uncharacterized protein LOC111486158 isoform X1 [Cucurbita maxima])

HSP 1 Score: 287.7 bits (735), Expect = 3.2e-74
Identity = 145/213 (68.08%), Postives = 167/213 (78.40%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60
           MIEQ EGSS  TSPDEP+ ++  P+RP EAK V+          +E +          +S
Sbjct: 1   MIEQEEGSSRTTSPDEPEIVIVLPTRPEEAKEVLA--------RSERSXXXXXXXXXXSS 60

Query: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120
            QPES   CIIDIK+ GES+DD +SS+EKVCRICHL S+ +S+TS+L++LGC CK ELG+
Sbjct: 61  RQPESQHTCIIDIKSTGESMDDANSSDEKVCRICHLSSD-QSVTSDLVNLGCRCKGELGM 120

Query: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180
           SHRDCAEIWF HRGNRQCEICGQTATNVR NRSS F I RNERR+VASS+VS VSLDNEV
Sbjct: 121 SHRDCAEIWFTHRGNRQCEICGQTATNVRGNRSSVFMIQRNERRMVASSSVSAVSLDNEV 180

Query: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFF 214
           SLSCCWGQRFCNFLLTCTVLAFLLPWFFR +FF
Sbjct: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRFNFF 204

BLAST of CsGy1G013180 vs. TAIR10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 5.9e-22
Identity = 59/143 (41.26%), Postives = 79/143 (55.24%), Query Frame = 0

Query: 71  IDIKTNGESVDDED--SSEEKVCRICHLGSE-NESITSELIHLGCSCKDELGISHRDCAE 130
           +D +T+ ESV       S EK CRICHLG E +     + + LGCSCKD+LG  H+ CA+
Sbjct: 56  LDDETDTESVASGSIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCAD 115

Query: 131 IWFMHRGNRQCEICGQTATNVRR--NRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSCC 190
            WF  +GN+ CEIC   A N  +  N      +  N   + A +T + V+  +      C
Sbjct: 116 TWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLC 175

Query: 191 WGQRFCNFLLTCTVLAFLLPWFF 209
            G RF NFLLTC V AF++ WFF
Sbjct: 176 RGNRFLNFLLTCMVCAFVISWFF 198

BLAST of CsGy1G013180 vs. TAIR10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-19
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 85  SSEEKVCRICHLGSENESITSEL-IHLGCSCKDELGISHRDCAEIWFMHRGNRQCEICGQ 144
           S  E+ CRICH+  +  ++ S + I LGCSCK +L  +H+ CAE WF  +GN+ CE+CG 
Sbjct: 73  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 132

Query: 145 TATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSCCWGQRFCNFLLTCTVLAFL 204
            A NV  +        RNE   V + T+ T         S   G RF NFLL C V AF+
Sbjct: 133 IAGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFV 192

Query: 205 LPWFF 209
           + W F
Sbjct: 193 ISWLF 197

BLAST of CsGy1G013180 vs. TAIR10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 50/136 (36.76%), Postives = 66/136 (48.53%), Query Frame = 0

Query: 76  NGESVDDEDSS--EEKVCRICHLGSENESITSELIHLGCSCKDELGISHRDCAEIWFMHR 135
           +   +DD+D++   EK CRICHLG E        I LGCSCKD+L ++HR CAE WF  +
Sbjct: 67  SSSEIDDDDATAPPEKDCRICHLGVETSG--GGAIELGCSCKDDLAVAHRQCAETWFKIK 126

Query: 136 GNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSCCW-GQRFCN 195
           G++ CEIC   A NV    +        ER L      +         +   W  QR  N
Sbjct: 127 GDKTCEICQSVARNV-GGANEMVGSTMEERELRNGEETAAGEGGGATVVENRWQPQRVVN 186

Query: 196 FLLTCTVLAFLLPWFF 209
            +L C V  F + W F
Sbjct: 187 LVLACMVFGFFISWIF 199

BLAST of CsGy1G013180 vs. TAIR10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-16
Identity = 53/134 (39.55%), Postives = 69/134 (51.49%), Query Frame = 0

Query: 88  EKVCRICHLGS--------ENESITSELIHLGCSCKDELGISHRDCAEIWFMHRGNRQCE 147
           E++CRICH GS        +++S++ ELI +GC CK+ELG++H  CAE WF  RGN  CE
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCE 158

Query: 148 ICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNE----VSLSCCWGQRFCNFLL 207
           ICG TA NV       ++  R+             +LD         SCC    F  FLL
Sbjct: 159 ICGCTAKNVTVRLMEDWSGERDN------------TLDGRRRRGRGQSCC---IFMVFLL 213

Query: 208 TCTVLAFLLPWFFR 210
           T      LL WFF+
Sbjct: 219 T----ILLLHWFFK 213

BLAST of CsGy1G013180 vs. TAIR10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 37/98 (37.76%), Postives = 48/98 (48.98%), Query Frame = 0

Query: 111 GCSCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASST 170
           GCSCK +LG++H  CAE WF  +GN  CEICG  A NV   +S+  +      +  A   
Sbjct: 133 GCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTHSQAAAGQ- 192

Query: 171 VSTVSLDNEVSLSCCWGQRFCNFLLTCTVLAFLLPWFF 209
               SL          G+   NFLL   V AF++ W F
Sbjct: 193 ----SLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLF 225

BLAST of CsGy1G013180 vs. Swiss-Prot
Match: sp|F4JKK0|SUD1_ARATH (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.6e-05
Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 0

Query: 65  SHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGISHRD 124
           S+ +  +   T    VDD D  EE VCRIC     N       +   C+C   +   H+D
Sbjct: 43  SNMDPAVSTATGSRYVDD-DEDEEDVCRIC----RNPGDADNPLRYPCACSGSIKFVHQD 102

Query: 125 CAEIWFMHRGNRQCEIC 142
           C   W  H   RQCE+C
Sbjct: 103 CLLQWLNHSNARQCEVC 114

BLAST of CsGy1G013180 vs. Swiss-Prot
Match: sp|Q32L65|MARH2_BOVIN (E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus OX=9913 GN=MARCH2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.8e-05
Identity = 25/71 (35.21%), Postives = 32/71 (45.07%), Query Frame = 0

Query: 83  EDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGISHRDCAEIWFMHRGNRQCEICG 142
           E  S+   CRICH G+  ES+ S      C C   LG  H+ C E W        CE+C 
Sbjct: 56  ETPSDGPFCRICHEGANGESLLSP-----CGCSGTLGAVHKSCLERWLSSSNTSYCELCH 115

Query: 143 QTATNVRRNRS 154
                 +R+RS
Sbjct: 116 TEFAVEKRSRS 121

BLAST of CsGy1G013180 vs. Swiss-Prot
Match: sp|Q68FA7|MARH3_XENTR (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis OX=8364 GN=march3 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.1e-04
Identity = 22/69 (31.88%), Postives = 31/69 (44.93%), Query Frame = 0

Query: 73  IKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGISHRDCAEIWFMH 132
           + T   ++  +  ++  +CRICH GS  E + S      C C   LG  HR C E W   
Sbjct: 51  LSTVVRTLTTQSFNDRPMCRICHEGSTQEDLLSP-----CECTGTLGTIHRSCLEHWLSS 110

Query: 133 RGNRQCEIC 142
                CE+C
Sbjct: 111 SNTSYCELC 114

BLAST of CsGy1G013180 vs. TrEMBL
Match: tr|A0A0A0LUV6|A0A0A0LUV6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096610 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.6e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60
           MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS
Sbjct: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60

Query: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120
           SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI
Sbjct: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120

Query: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180
           SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV
Sbjct: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180

Query: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 215
           SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG
Sbjct: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 214

BLAST of CsGy1G013180 vs. TrEMBL
Match: tr|A0A1S3CJ88|A0A1S3CJ88_CUCME (probable E3 ubiquitin ligase SUD1 OS=Cucumis melo OX=3656 GN=LOC103501475 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-110
Identity = 202/214 (94.39%), Postives = 208/214 (97.20%), Query Frame = 0

Query: 1   MIEQNEGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS 60
           MIEQNEGSSGITSP+EP+TI ASPSRPREAKGVIGGEGGT VRENEEN KRHG EMLE S
Sbjct: 1   MIEQNEGSSGITSPNEPETIAASPSRPREAKGVIGGEGGTYVRENEENSKRHGEEMLE-S 60

Query: 61  SQPESHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGI 120
           SQPES QNCIIDIK+NGESVDDEDSSEEKVCRICHLGSE+ESITS+LIHLGCSCKDELGI
Sbjct: 61  SQPESRQNCIIDIKSNGESVDDEDSSEEKVCRICHLGSEHESITSDLIHLGCSCKDELGI 120

Query: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEV 180
           SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASST+STVSLDNEV
Sbjct: 121 SHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTMSTVSLDNEV 180

Query: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 215
           SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG
Sbjct: 181 SLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFFG 213

BLAST of CsGy1G013180 vs. TrEMBL
Match: tr|A0A200QXL2|A0A200QXL2_9MAGN (Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1727g28 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.1e-34
Identity = 91/211 (43.13%), Postives = 123/211 (58.29%), Query Frame = 0

Query: 6   EGSSGITSPDEPKTIVASPSRPREAKGVIGGEGGTCVRENEENRKRHGVEMLETS-SQPE 65
           EG+S   +P   +T++    R  E + V G  G + V++N     +  ++ L++  S+PE
Sbjct: 130 EGTSRPNNPVVTETVIM--VRSEEGESVSGDAGVSKVKDNVVEMSKVSIDKLKSKVSEPE 189

Query: 66  SHQNCIIDIKTNGESVDDEDSSEEKVCRICHLGSENESITSELIHLGCSCKDELGISHRD 125
            H NC+IDIK N  +++ E+   EKVCRICHL  +  S   +LI LGC CKDELGI+HR 
Sbjct: 190 KH-NCVIDIKCNCGTLEGENKDGEKVCRICHLSGDRPSEAPDLIPLGCRCKDELGIAHRH 249

Query: 126 CAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSC 185
           CAE WF  +GNR CEICG+ A N+     + F    NERR   +S        N     C
Sbjct: 250 CAEAWFKLKGNRCCEICGEAAKNITGVWDNRFMEEWNERRYDGTS-------GNSSDRRC 309

Query: 186 -CW-GQRFCNFLLTCTVLAFLLPWFFRADFF 214
             W GQ FCNFL+ C V+AF+LPWFFR + F
Sbjct: 310 GFWRGQPFCNFLMACLVMAFVLPWFFRVNMF 330

BLAST of CsGy1G013180 vs. TrEMBL
Match: tr|A0A1U7Z2V9|A0A1U7Z2V9_NELNU (uncharacterized protein LOC104589735 OS=Nelumbo nucifera OX=4432 GN=LOC104589735 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-30
Identity = 77/154 (50.00%), Postives = 97/154 (62.99%), Query Frame = 0

Query: 63  PESHQN-CIIDIKTNGESVDDEDSSEEKVCRICHL--GSENESITSELIHLGCSCKDELG 122
           PE+ ++ C++DIK     +  E+   EKVCRICHL  G ++ +  S+LI LGC CK ELG
Sbjct: 101 PEAEKHACVVDIKCGDGELSSENWEGEKVCRICHLSSGFDHPAEVSDLITLGCGCKSELG 160

Query: 123 ISHRDCAEIWFMHRGNRQCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNE 182
           I+HR CAE WF  RGNR CEICG+TA NV     + F    NERR  +SST S     + 
Sbjct: 161 IAHRHCAEAWFKLRGNRCCEICGETAKNVTGVGDNRFMDEWNERRFRSSSTNS-----SS 220

Query: 183 VSLSCCWGQRFCNFLLTCTVLAFLLPWFFRADFF 214
               C  GQ FCNFL+ C V+AF+LPWFFR + F
Sbjct: 221 RGRGCWRGQPFCNFLMACLVIAFILPWFFRVNMF 249

BLAST of CsGy1G013180 vs. TrEMBL
Match: tr|A0A2C9U657|A0A2C9U657_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G058000 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-30
Identity = 85/197 (43.15%), Postives = 119/197 (60.41%), Query Frame = 0

Query: 33  VIGGEGGTCVRE-NEENR-KRHGVE----MLETSSQ---PESHQNCIIDIK-TNGESVDD 92
           ++  E    +RE NE+++ K  G+E    M++ S      E  Q+C+ID+K  +G     
Sbjct: 182 IVNSEENIAIREGNEQSQVKSCGLESSKVMMDKSKTQVCKEKKQSCVIDMKCPSGGGGSH 241

Query: 93  EDSSEEKVCRICHLGSENESITSE------LIHLGCSCKDELGISHRDCAEIWFMHRGNR 152
           +D   E+VCRICHLG+E  + T+E      LI LGC CKDELGI+H  CAE WF  +GNR
Sbjct: 242 KDGDGERVCRICHLGAEGLAETTETTASMDLIQLGCVCKDELGIAHAYCAEAWFKLKGNR 301

Query: 153 QCEICGQTATNVRRNRSSHFAIHRNERRLVASSTVSTVSLDNEVSLSCCWGQRFCNFLLT 212
            CEICG+TA N+     + F    N+RR + SS+ S     ++ +  C  GQ FCNFL++
Sbjct: 302 VCEICGETAKNITGVGDNRFMDEWNQRRFIGSSSSS-----SDRARGCWRGQPFCNFLMS 361

Query: 213 CTVLAFLLPWFFRADFF 214
           C V+AF+LPWFFR + F
Sbjct: 362 CLVIAFVLPWFFRVNIF 373

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011653704.12.5e-119100.00PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X1 [Cucumis sativus] >KGN64... [more]
XP_008463280.11.6e-11094.39PREDICTED: probable E3 ubiquitin ligase SUD1 [Cucumis melo][more]
XP_022147939.11.9e-7973.61uncharacterized protein LOC111016745 [Momordica charantia][more]
XP_023530414.11.3e-7569.48uncharacterized protein LOC111792994 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022988953.13.2e-7468.08uncharacterized protein LOC111486158 isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G01070.25.9e-2241.26RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G05830.12.7e-1940.80RING/FYVE/PHD zinc finger superfamily protein[more]
AT2G37950.11.3e-1636.76RING/FYVE/PHD zinc finger superfamily protein[more]
AT2G34200.13.7e-1639.55RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G59000.12.1e-1137.76RING/FYVE/PHD zinc finger superfamily protein[more]
Match NameE-valueIdentityDescription
sp|F4JKK0|SUD1_ARATH3.6e-0533.77Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S... [more]
sp|Q32L65|MARH2_BOVIN4.8e-0535.21E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus OX=9913 GN=MARCH2 PE=2 SV=1[more]
sp|Q68FA7|MARH3_XENTR3.1e-0431.88E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis OX=8364 GN=march3 PE=2 ... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LUV6|A0A0A0LUV6_CUCSA1.6e-119100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096610 PE=4 SV=1[more]
tr|A0A1S3CJ88|A0A1S3CJ88_CUCME1.1e-11094.39probable E3 ubiquitin ligase SUD1 OS=Cucumis melo OX=3656 GN=LOC103501475 PE=4 S... [more]
tr|A0A200QXL2|A0A200QXL2_9MAGN2.1e-3443.13Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1727g28 PE=4 SV=1[more]
tr|A0A1U7Z2V9|A0A1U7Z2V9_NELNU1.4e-3050.00uncharacterized protein LOC104589735 OS=Nelumbo nucifera OX=4432 GN=LOC104589735... [more]
tr|A0A2C9U657|A0A2C9U657_MANES1.4e-3043.15Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G058000 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR033275MARCH-like
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013180.1CsGy1G013180.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 90..142
e-value: 9.9E-12
score: 55.0
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 91..141
e-value: 1.4E-8
score: 34.6
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 83..148
score: 19.149
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 74..154
e-value: 3.1E-14
score: 54.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR23012:SF76SUBFAMILY NOT NAMEDcoord: 69..212
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 85..145
IPR033275E3 ubiquitin-protein ligase MARCH-likePANTHERPTHR23012MEMBRANE ASSOCIATED RING FINGERcoord: 69..212

The following gene(s) are paralogous to this gene:

None