CsGy1G013030 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G013030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiondof zinc finger protein DOF5.3-like
LocationChr1 : 8450103 .. 8451838 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAACACCACCAACAACCACAATCCCTCTCATCATTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTAAATTGTTCCATTGGGATTATTGTTGCTTTATATATTAACCCATCTCCCCTTCTTCTTTCTTCCTCACTTCTCATCACTTTCCTTTACCCTCTTTTCCTCTCTCTCTCTCTCCTTCTTCTTCTTCTTTCTACACACTTCAATATCAAAAAATCTTCTGTTTTGTTGTTTTTGTTTCACTTCAACAATGGATCTTCCCACTGCCCAACATCATCAGGTAATTTATTACAACACACCATCATATATCTATACATCATCCTTTTTCATTATTATGCTTCTTCTCTTCATCTCTTTCTTTAATCTCCCTCTTTCATCATTTATGGTTTCTTTCTCCTCTCTCTCTCTCTCGCTTCTATTCTAATATTCGAATGTTTTCAGAAAAAAATTAGGCTTCTTTTCTCCTAATTTTTGTACTTTGATTATTATATTTCTTGAAAAAGAAAAAAACAGGTTTTTGAAAATTTTCAGTTTAGTTTTAATCATGTCAATAGAAACTGGATAACCATTACAAACAAAAGGAACTTAAATGTAGAAGAAGAAGTAAGTGTTTATAAGCGTTTTTTTAACACAGGGTTTCAAACCTCTAAGCTTAATTTGGGAAGAAAGGGAGAGGGAAAATGGGATTTTTTGTTTTTGGGTTTGAAATTATCAGTACTAATTATATAGATATGATGATGATTTATGATAGGAAATGGAAACAAATTCAGTGGAGAACATGATGGTATGTCAAAACTCAAAAGATCATCAAGTTAGAAAGGCAAGACCACAGCCAGAACAAGCGTTGAAATGTCCAAGATGTGACTCAACAAACACCAAATTTTGTTACTATAACAACTACAGCCTATCTCAACCAAGATACTTTTGCAAATCCTGCCGCCGTTACTGGACACAAGGTGGTACCCTCCGCAATGTTCCAGTTGGCGGAGGTTGCCGTAAAAACAAAAGATCATCATCATCCTCATCCTCCTCAGCTTCCTCTAAAAAATCCCAAGACCATCCCTTCGGTGCCTCCACCGCCCTACCCGGCCAATTGTCCTACGATCACCAAGCTCATGATCTCAGTCTCGCATTCGCTAGGCTTCACAAAAACTCGTGTTCAAATGGGAGCGTTCCCACATTCAACGACTTCGATTTCTCCATCTTGGGAATGCCAAATGGCGATGTTTTGAACGGCGGCGGCTTTGCCTATAATTCTCAAAGCTTGTATTATGGAAATGACAACAACATGGGAGCTGGAATCGAAAGTAATGGCGATCAAATGAGATTACAGCCGTACGATCACGATCATCATCATCATCATCACAATCAACAATATAGCAATGCTACAACAACAGCGGTAACAGTGACGACGATGAAGCAAGAGCTATTTGGAGGACGAGAAATGAATAACGGAAGTGACCAAAGTAAAATCCTTTGGGGATACCCAAATTGGCAAATGAACAATAACAATAATAACGTAATAGATTCAAACACAACCACAACGACGATGATGGGAGCAATGGATTTCGATTCGGGTTCAGCTCGAGAAAGTTGGAACAGCAATGCCTTCACTAATGCTTCTTCTTGGCATGGCCTTCTCAATAGTCCTCTCATGTAATTCCCCTTACCTTCGTTAAAATTATTGTGTGTTCATTTTTTTTTTCTTTTTTCTTACTTAGAAACTAG

mRNA sequence

GGAAACACCACCAACAACCACAATCCCTCTCATCATTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTAAATTGTTCCATTGGGATTATTGTTGCTTTATATATTAACCCATCTCCCCTTCTTCTTTCTTCCTCACTTCTCATCACTTTCCTTTACCCTCTTTTCCTCTCTCTCTCTCTCCTTCTTCTTCTTCTTTCTACACACTTCAATATCAAAAAATCTTCTGTTTTGTTGTTTTTGTTTCACTTCAACAATGGATCTTCCCACTGCCCAACATCATCAGGAAATGGAAACAAATTCAGTGGAGAACATGATGGTATGTCAAAACTCAAAAGATCATCAAGTTAGAAAGGCAAGACCACAGCCAGAACAAGCGTTGAAATGTCCAAGATGTGACTCAACAAACACCAAATTTTGTTACTATAACAACTACAGCCTATCTCAACCAAGATACTTTTGCAAATCCTGCCGCCGTTACTGGACACAAGGTGGTACCCTCCGCAATGTTCCAGTTGGCGGAGGTTGCCGTAAAAACAAAAGATCATCATCATCCTCATCCTCCTCAGCTTCCTCTAAAAAATCCCAAGACCATCCCTTCGGTGCCTCCACCGCCCTACCCGGCCAATTGTCCTACGATCACCAAGCTCATGATCTCAGTCTCGCATTCGCTAGGCTTCACAAAAACTCGTGTTCAAATGGGAGCGTTCCCACATTCAACGACTTCGATTTCTCCATCTTGGGAATGCCAAATGGCGATGTTTTGAACGGCGGCGGCTTTGCCTATAATTCTCAAAGCTTGTATTATGGAAATGACAACAACATGGGAGCTGGAATCGAAAGTAATGGCGATCAAATGAGATTACAGCCGTACGATCACGATCATCATCATCATCATCACAATCAACAATATAGCAATGCTACAACAACAGCGGTAACAGTGACGACGATGAAGCAAGAGCTATTTGGAGGACGAGAAATGAATAACGGAAGTGACCAAAGTAAAATCCTTTGGGGATACCCAAATTGGCAAATGAACAATAACAATAATAACGTAATAGATTCAAACACAACCACAACGACGATGATGGGAGCAATGGATTTCGATTCGGGTTCAGCTCGAGAAAGTTGGAACAGCAATGCCTTCACTAATGCTTCTTCTTGGCATGGCCTTCTCAATAGTCCTCTCATAAACTAG

Coding sequence (CDS)

ATGGATCTTCCCACTGCCCAACATCATCAGGAAATGGAAACAAATTCAGTGGAGAACATGATGGTATGTCAAAACTCAAAAGATCATCAAGTTAGAAAGGCAAGACCACAGCCAGAACAAGCGTTGAAATGTCCAAGATGTGACTCAACAAACACCAAATTTTGTTACTATAACAACTACAGCCTATCTCAACCAAGATACTTTTGCAAATCCTGCCGCCGTTACTGGACACAAGGTGGTACCCTCCGCAATGTTCCAGTTGGCGGAGGTTGCCGTAAAAACAAAAGATCATCATCATCCTCATCCTCCTCAGCTTCCTCTAAAAAATCCCAAGACCATCCCTTCGGTGCCTCCACCGCCCTACCCGGCCAATTGTCCTACGATCACCAAGCTCATGATCTCAGTCTCGCATTCGCTAGGCTTCACAAAAACTCGTGTTCAAATGGGAGCGTTCCCACATTCAACGACTTCGATTTCTCCATCTTGGGAATGCCAAATGGCGATGTTTTGAACGGCGGCGGCTTTGCCTATAATTCTCAAAGCTTGTATTATGGAAATGACAACAACATGGGAGCTGGAATCGAAAGTAATGGCGATCAAATGAGATTACAGCCGTACGATCACGATCATCATCATCATCATCACAATCAACAATATAGCAATGCTACAACAACAGCGGTAACAGTGACGACGATGAAGCAAGAGCTATTTGGAGGACGAGAAATGAATAACGGAAGTGACCAAAGTAAAATCCTTTGGGGATACCCAAATTGGCAAATGAACAATAACAATAATAACGTAATAGATTCAAACACAACCACAACGACGATGATGGGAGCAATGGATTTCGATTCGGGTTCAGCTCGAGAAAGTTGGAACAGCAATGCCTTCACTAATGCTTCTTCTTGGCATGGCCTTCTCAATAGTCCTCTCATAAACTAG

Protein sequence

MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSSSSSSSSASSKKSQDHPFGASTALPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQSLYYGNDNNMGAGIESNGDQMRLQPYDHDHHHHHHNQQYSNATTTAVTVTTMKQELFGGREMNNGSDQSKILWGYPNWQMNNNNNNVIDSNTTTTTMMGAMDFDSGSARESWNSNAFTNASSWHGLLNSPLIN
Homology
[Close]
BLAST of CsGy1G013030 vs. NCBI nr
Match: XP_004147273.1 (PREDICTED: dof zinc finger protein DOF2.1-like [Cucumis sativus] >KGN64763.1 hypothetical protein Csa_1G089510 [Cucumis sativus])

HSP 1 Score: 485.0 bits (1247), Expect = 2.0e-133
Identity = 311/312 (99.68%), Postives = 312/312 (100.00%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY 60
           MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY 60

Query: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120
           SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA
Sbjct: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120

Query: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQ 180
           LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQ
Sbjct: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQ 180

Query: 181 SLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGR 240
           SLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGR
Sbjct: 181 SLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGR 240

Query: 241 EMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNA 300
           EMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNA
Sbjct: 241 EMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNA 300

Query: 301 SSWHGLLNSPLI 313
           SSWHGLLNSPL+
Sbjct: 301 SSWHGLLNSPLM 312

[Close]
BLAST of CsGy1G013030 vs. NCBI nr
Match: XP_008464848.1 (PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 8.7e-81
Identity = 171/174 (98.28%), Postives = 172/174 (98.85%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY 60
           MDLPTAQHHQEMETNSVENMMVCQNSKDHQ RKARPQPEQALKCPRCDSTNTKFCYYNNY
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQTRKARPQPEQALKCPRCDSTNTKFCYYNNY 60

Query: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120
           SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA
Sbjct: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120

Query: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGG 175
           LPGQLSYDHQAHDLSLAFARLHKNSCSNG VPTFNDFDFSILGMPNGD+LNGGG
Sbjct: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGGVPTFNDFDFSILGMPNGDLLNGGG 174

[Close]
BLAST of CsGy1G013030 vs. NCBI nr
Match: XP_023525316.1 (dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 5.3e-62
Identity = 180/322 (55.90%), Postives = 195/322 (60.56%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKD--HQVRKARPQPEQALKCPRCDSTNTKFCYYN 60
           MDL  A +HQE+E          Q+SK    Q RK RPQP+QALKCPRCDS NTKFCYYN
Sbjct: 1   MDLSAAVNHQEIEQQ--------QHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG----XXXXXXXXXXXXXXXXXXXXXXXDHP 120
           NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG        XXXXXXXXXXXXXXXXXXX  P
Sbjct: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRXXXXXXXXXXXXXXXXXXXXXP 120

Query: 121 FGA---STALPGQLSYDHQAHDLSLAFARLHKNSCSNGSV-PTFNDFDFSILGMPNGDVL 180
           F A   +T LP  LSYDHQ     LAFARLHKNSC  GSV PTFNDFDF  LGMPNGDVL
Sbjct: 121 FAAAAVATVLP-HLSYDHQ----GLAFARLHKNSC--GSVTPTFNDFDFPTLGMPNGDVL 180

Query: 181 NGGGFAYNSQSLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXX 240
           N  GF YNSQ +YY N+NN   GIES  DQMRLQPYD                       
Sbjct: 181 N--GFPYNSQGMYYDNNNNNIGGIESAIDQMRLQPYDQDHHATTTAVTVTTMK------- 240

Query: 241 XXXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARE 300
                    +E+ N  D+SKI+WGY N                     G MD +     +
Sbjct: 241 ---------QEVYNAGDESKIVWGYAN-------------------NNGIMDSNMMMGMD 266

Query: 301 SWNSNAFTNASSWHGLLNSPLI 313
                 F+NASSWHGLLNSPL+
Sbjct: 301 F----GFSNASSWHGLLNSPLM 266

[Close]
BLAST of CsGy1G013030 vs. NCBI nr
Match: XP_022998890.1 (dof zinc finger protein DOF2.1-like [Cucurbita maxima])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 180/321 (56.07%), Postives = 194/321 (60.44%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKD--HQVRKARPQPEQALKCPRCDSTNTKFCYYN 60
           MDL  A HHQE+E          Q+SK    Q RK RPQP+QALKCPRCDS NTKFCYYN
Sbjct: 1   MDLSAAVHHQEIEQ---------QHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG-----XXXXXXXXXXXXXXXXXXXXXXXDH 120
           NYSLSQPRYFCKSCRRYWTQGGTLRN+PVG      XXXXXXXXXXXXXXXXXXXXXXDH
Sbjct: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNIPVGGGCRKNXXXXXXXXXXXXXXXXXXXXXXDH 120

Query: 121 PFGASTALPGQLSYDHQAHDLSLAFARLHKNSCSNGSV-PTFNDFDFSILGMPNGDVLNG 180
           PF ++ ALP  LSYDHQ     LAFARLHKNSC  GSV PTFNDFDF  LGMPNGDVLN 
Sbjct: 121 PFASAAALP-HLSYDHQ----GLAFARLHKNSC--GSVTPTFNDFDFPTLGMPNGDVLN- 180

Query: 181 GGFAYNSQSLY-YGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXX 240
            GF YNSQ +Y          GIES  DQMRLQPYD                        
Sbjct: 181 -GFPYNSQGMYXXXXXXXXXGGIESGIDQMRLQPYDQDHHATTTAVTVTTMK-------- 240

Query: 241 XXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARES 300
                   +E+ N  D+SKILWG  N                     G MD +     + 
Sbjct: 241 --------QEVYNAGDESKILWGIAN-------------------NNGIMDSNMMMGMDF 264

Query: 301 WNSNAFTNASSWHGLLNSPLI 313
                F+NASSWHGLLNSPL+
Sbjct: 301 ----GFSNASSWHGLLNSPLM 264

[Close]
BLAST of CsGy1G013030 vs. NCBI nr
Match: XP_022949431.1 (dof zinc finger protein DOF5.3-like [Cucurbita moschata])

HSP 1 Score: 230.7 bits (587), Expect = 6.7e-57
Identity = 176/321 (54.83%), Postives = 188/321 (58.57%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKD--HQVRKARPQPEQALKCPRCDSTNTKFCYYN 60
           MDL  A HHQE+E          Q+SK    Q RK RPQP+QALKCPRCDS NTKFCYYN
Sbjct: 1   MDLSAAVHHQEIEQ---------QHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG-----XXXXXXXXXXXXXXXXXXXXXXXDH 120
           NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG       XXXXXXXXXXXXXXXXXXXXX  
Sbjct: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 PFGASTALPGQLSYDHQAHDLSLAFARLHKNSCSNGSV-PTFNDFDFSILGMPNGDVLNG 180
               +T LP  LSYDHQ     LAFARLHKNSC  GSV PTFNDFDF  LGMPNGDVLN 
Sbjct: 121 XXXXATVLP-HLSYDHQ----GLAFARLHKNSC--GSVTPTFNDFDFPTLGMPNGDVLN- 180

Query: 181 GGFAYNSQSL-YYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXX 240
            GF YNSQ +           GIES  DQMRLQPYD                        
Sbjct: 181 -GFPYNSQEMXXXXXXXXXXGGIESGIDQMRLQPYDQDHHATTTAVTVTTMK-------- 240

Query: 241 XXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARES 300
                   +E+ N  D+SKILWGY N                     G MD +     + 
Sbjct: 241 --------QEVYNAGDESKILWGYAN-------------------NNGIMDSNMMMGMDF 264

Query: 301 WNSNAFTNASSWHGLLNSPLI 313
                F+NASSWHGLLNSPL+
Sbjct: 301 ----GFSNASSWHGLLNSPLM 264

[Close]
BLAST of CsGy1G013030 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27
Identity = 63/118 (53.39%), Postives = 71/118 (60.17%), Query Frame = 0 

Query: 35  RPQ-PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXX 94
           RPQ PE AL+CPRCDSTNTKFCYYNNYSL+QPRYFCKSCRRYWT+GGTLRN+PVG     
Sbjct: 47  RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106

Query: 95  XXXXXXXXXXXXXXXXXXDHPFGASTALPGQLSYDHQAH-DLSLAFARLHKNSCSNGS 151
                                 G   +  G   Y +  H DLSLAFA L+K    + S
Sbjct: 107 NKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSS 164

[Close]
BLAST of CsGy1G013030 vs. TAIR10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 115.2 bits (287), Expect = 7.5e-26
Identity = 93/155 (60.00%), Postives = 104/155 (67.10%), Query Frame = 0 

Query: 40  QALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXX 99
           +A  CPRC+S NTKFCYYNNYSLSQPRYFCKSCRRYWT+GGTLRNVPVGXXXXXXXXXXX
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGXXXXXXXXXXX 105

Query: 100 XXXXXXXXXXXXD-HPFGASTAL-----PGQLSYDHQAHDLSLAFARLHKNSCSN-GSVP 159
           XXXXXXXXXX  + H       L     P    YDH   DL+LAFA L K+  S+  + P
Sbjct: 106 XXXXXXXXXXSINFHTDPLQNPLITGMPPSSFGYDHSI-DLNLAFATLQKHHLSSQATTP 165

Query: 160 TFN-DFDFSILGMPNGDV-LNGGGFAYNSQSLYYG 186
           +F    D SI G    DV + GG     + SL YG
Sbjct: 166 SFGFGGDLSIYGNSTNDVGIFGGQNGTYNNSLCYG 199

[Close]
BLAST of CsGy1G013030 vs. TAIR10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 46/57 (80.70%), Postives = 54/57 (94.74%), Query Frame = 0 

Query: 32 RKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVG 89
          RKARP+ +QA+ CPRC+STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVG
Sbjct: 43 RKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

[Close]
BLAST of CsGy1G013030 vs. TAIR10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 112.1 bits (279), Expect = 6.3e-25
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 0 

Query: 32 RKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVG 89
          RKARP+ +QAL CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT GG+LRN+PVG
Sbjct: 39 RKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVG 95

[Close]
BLAST of CsGy1G013030 vs. TAIR10
Match: AT3G45610.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 0 

Query: 5  TAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQ 64
          ++ H   M  +S          K     +  P PEQ+L+CPRCDSTNTKFCYYNNYSLSQ
Sbjct: 4  SSMHQNVMGVSSCSTQDYQNQKKPLSATRPAP-PEQSLRCPRCDSTNTKFCYYNNYSLSQ 63

Query: 65 PRYFCKSCRRYWTQGGTLRNVPVG 89
          PRYFCKSCRRYWT+GG LRN+P+G
Sbjct: 64 PRYFCKSCRRYWTKGGILRNIPIG 86

[Close]
BLAST of CsGy1G013030 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 63/118 (53.39%), Postives = 71/118 (60.17%), Query Frame = 0 

Query: 35  RPQ-PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXX 94
           RPQ PE AL+CPRCDSTNTKFCYYNNYSL+QPRYFCKSCRRYWT+GGTLRN+PVG     
Sbjct: 47  RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106

Query: 95  XXXXXXXXXXXXXXXXXXDHPFGASTALPGQLSYDHQAH-DLSLAFARLHKNSCSNGS 151
                                 G   +  G   Y +  H DLSLAFA L+K    + S
Sbjct: 107 NKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSS 164

[Close]
BLAST of CsGy1G013030 vs. Swiss-Prot
Match: sp|Q8LE43|DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 93/155 (60.00%), Postives = 104/155 (67.10%), Query Frame = 0 

Query: 40  QALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXX 99
           +A  CPRC+S NTKFCYYNNYSLSQPRYFCKSCRRYWT+GGTLRNVPVGXXXXXXXXXXX
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGXXXXXXXXXXX 105

Query: 100 XXXXXXXXXXXXD-HPFGASTAL-----PGQLSYDHQAHDLSLAFARLHKNSCSN-GSVP 159
           XXXXXXXXXX  + H       L     P    YDH   DL+LAFA L K+  S+  + P
Sbjct: 106 XXXXXXXXXXSINFHTDPLQNPLITGMPPSSFGYDHSI-DLNLAFATLQKHHLSSQATTP 165

Query: 160 TFN-DFDFSILGMPNGDV-LNGGGFAYNSQSLYYG 186
           +F    D SI G    DV + GG     + SL YG
Sbjct: 166 SFGFGGDLSIYGNSTNDVGIFGGQNGTYNNSLCYG 199

[Close]
BLAST of CsGy1G013030 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0 

Query: 32  RKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVG 89
           RK RPQ  +ALKCPRCDS NTKFCYYNNYS+SQPRYFCK+CRRYWT GGTLRNVP+G
Sbjct: 50  RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIG 106

[Close]
BLAST of CsGy1G013030 vs. Swiss-Prot
Match: sp|Q8LAP8|DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-24
Identity = 46/57 (80.70%), Postives = 54/57 (94.74%), Query Frame = 0 

Query: 32 RKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVG 89
          RKARP+ +QA+ CPRC+STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVG
Sbjct: 43 RKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

[Close]
BLAST of CsGy1G013030 vs. Swiss-Prot
Match: sp|Q9SXG8|DOF1_ORYSJ (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.1e-24
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 0 

Query: 34  ARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVG 89
           ARPQ E+AL CPRC+STNTKFCYYNNYSL QPRYFCK+CRRYWT+GG+LRNVPVG
Sbjct: 70  ARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVG 124

[Close]
BLAST of CsGy1G013030 vs. TrEMBL
Match: tr|A0A0A0LSJ8|A0A0A0LSJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089510 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.3e-133
Identity = 311/312 (99.68%), Postives = 312/312 (100.00%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY 60
           MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY 60

Query: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120
           SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA
Sbjct: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120

Query: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQ 180
           LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQ
Sbjct: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGGFAYNSQ 180

Query: 181 SLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGR 240
           SLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGR
Sbjct: 181 SLYYGNDNNMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGR 240

Query: 241 EMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNA 300
           EMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNA
Sbjct: 241 EMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNA 300

Query: 301 SSWHGLLNSPLI 313
           SSWHGLLNSPL+
Sbjct: 301 SSWHGLLNSPLM 312

[Close]
BLAST of CsGy1G013030 vs. TrEMBL
Match: tr|A0A1S3CMI2|A0A1S3CMI2_CUCME (dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103502622 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.8e-81
Identity = 171/174 (98.28%), Postives = 172/174 (98.85%), Query Frame = 0 

Query: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNY 60
           MDLPTAQHHQEMETNSVENMMVCQNSKDHQ RKARPQPEQALKCPRCDSTNTKFCYYNNY
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKDHQTRKARPQPEQALKCPRCDSTNTKFCYYNNY 60

Query: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120
           SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA
Sbjct: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTA 120

Query: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNGDVLNGGG 175
           LPGQLSYDHQAHDLSLAFARLHKNSCSNG VPTFNDFDFSILGMPNGD+LNGGG
Sbjct: 121 LPGQLSYDHQAHDLSLAFARLHKNSCSNGGVPTFNDFDFSILGMPNGDLLNGGG 174

[Close]
BLAST of CsGy1G013030 vs. TrEMBL
Match: tr|A0A2C9V2G5|A0A2C9V2G5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G140300 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.7e-45
Identity = 160/327 (48.93%), Postives = 189/327 (57.80%), Query Frame = 0 

Query: 4   PTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNYSLS 63
           P++   QEM ++S+ENM+VC  SK HQ RK RPQPEQALKCPRCDSTNTKFCYYNNYSLS
Sbjct: 3   PSSGQQQEMASHSIENMLVC--SKPHQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLS 62

Query: 64  QPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTALPG 123
           QPRYFCKSCRRYWT+GGTLRNVPVGXXXXXXXXXXXXXXXXXXXXX         ++LP 
Sbjct: 63  QPRYFCKSCRRYWTKGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXQLTPNTHPLSSLP- 122

Query: 124 QLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPNG----------DVLNGG 183
            L+YD  ++DLSLAFARLH    S G +   +  D SILG PN           + L  G
Sbjct: 123 PLAYD--SNDLSLAFARLHHQ--STGQLGFDDQHDLSILGNPNSHTSAATPSLFEALRYG 182

Query: 184 ---GFAYNSQSLYYGNDN-NMG----AGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXX 243
                + N Q+LYYG  N NMG    +GI +   +M + PY+                  
Sbjct: 183 FLDSQSNNLQNLYYGYGNGNMGEVEDSGICNVSGEM-MMPYE----------DMSGAATQ 242

Query: 244 XXXXXXXXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDS 303
                     L  GRE  N    SK+LWG+P WQ                   G +D   
Sbjct: 243 AVTVTTMKQELCNGREDEN----SKLLWGFP-WQ------------INGNGIGGELD--- 287

Query: 304 GSARESWNSNAFTNASSWHGLLNSPLI 313
              RE+WN+      S+WHGLLNSPL+
Sbjct: 303 -PGRENWNT---LGGSAWHGLLNSPLM 287

[Close]
BLAST of CsGy1G013030 vs. TrEMBL
Match: tr|A0A2C9W0C2|A0A2C9W0C2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G026400 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.5e-44
Identity = 160/325 (49.23%), Postives = 189/325 (58.15%), Query Frame = 0 

Query: 4   PTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNYSLS 63
           P++  +QEM    +EN++VC  SK HQ +K RPQPEQALKCPRCDS NTKFCYYNNYSLS
Sbjct: 3   PSSGQNQEM---PLENIIVC--SKPHQDKKPRPQPEQALKCPRCDSINTKFCYYNNYSLS 62

Query: 64  QPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGASTALPG 123
           QPRYFCKSCRRYWT+GGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXX  +P    T+LP 
Sbjct: 63  QPRYFCKSCRRYWTKGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXQTNPL---TSLP- 122

Query: 124 QLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFDFSILGMPN------------GDVLN 183
             SYD  ++DLSLAFARL K   SNG +   +D D SILG P+             D L 
Sbjct: 123 --SYD--SNDLSLAFARLQKQ--SNGQLGFDDDHDLSILGNPSIHNTTSASTSPFFDALR 182

Query: 184 GG---GFAYNSQSLYYGNDN-NMGAGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXXXX 243
            G     + N Q+LYYG  N NMG    ++G+ M + PY+                    
Sbjct: 183 NGILDSQSNNLQNLYYGYGNGNMGE--VASGEMMMMMPYE----------DMSGAATQAV 242

Query: 244 XXXXXXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDSGS 303
                      GRE     D +K+LWG+P WQ                   G  D DSG 
Sbjct: 243 TVTTMKQEFCNGRE----EDDNKVLWGFP-WQ-------------LNGNGIGGGDLDSG- 276

Query: 304 ARESWNSNAFTNASSWHGLLNSPLI 313
            RE+WN       S+WHGL+NSPL+
Sbjct: 303 -REAWNG----LGSTWHGLVNSPLM 276

[Close]
BLAST of CsGy1G013030 vs. TrEMBL
Match: tr|A0A2I4EHM5|A0A2I4EHM5_9ROSI (dof zinc finger protein DOF2.1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108989662 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.5e-44
Identity = 152/349 (43.55%), Postives = 182/349 (52.15%), Query Frame = 0 

Query: 4   PTAQHHQEMETNSVENMMVCQNSKDHQVRKARPQPEQALKCPRCDSTNTKFCYYNNYSLS 63
           P+++ HQEM  + +ENMMVC  ++  Q RK RPQPEQALKCPRCDSTNTKFCYYNNYSLS
Sbjct: 3   PSSEQHQEMPAHMLENMMVCLKAQPDQ-RKPRPQPEQALKCPRCDSTNTKFCYYNNYSLS 62

Query: 64  QPRYFCKSCRRYWTQGGTLRNVPVGXXXXXXXXXXXXXXXXXXXXXXXDHPFGAST---- 123
           QPRYFCKSCRRYWT+GGTLRNVPVG            XXXXXXXX   D P   +T    
Sbjct: 63  QPRYFCKSCRRYWTKGGTLRNVPVG-----GGCRKNKXXXXXXXXRSQDQPLTPNTNPLG 122

Query: 124 ALPGQLSYDHQAHDLSLAFARLHKNSCSNGSVPTFNDFD----------FSILGMPNGDV 183
           +LP  LSYD   +DLSLAFARL K SC  G    F+D +          F +LG P G  
Sbjct: 123 SLP-SLSYD-SPNDLSLAFARLQKQSC--GHELGFDDHEFQMGNAAATHFDLLGNPAG-- 182

Query: 184 LNGG------GFA-------YNSQSL----YYGNDNNMGAGIESNG---------DQMRL 243
           +NG       GF         +SQ++    YYG ++N+  G   NG          +M L
Sbjct: 183 MNGSANTTPPGFLGSLRNGFLDSQNIFPNFYYGYNDNVNMGEADNGTGGGVVGVSGEMAL 242

Query: 244 QPYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGGREMNNGSDQSKILWGYPNWQXXXX 303
            PY+                               GR  N   DQ+++LWG+P WQ    
Sbjct: 243 -PYE---------EMSNAATTTAVTVTTMKQEFCNGRSEN---DQNRVLWGFP-WQ---- 302

Query: 304 XXXXXXXXXXXXXXXGAMDFDSGSARESWNSNAFTNASSWHGLLNSPLI 313
                             D DSG  RESWN+ A   A SWHGL+NSPL+
Sbjct: 303 ----------LNGNGNMADLDSG--RESWNNGA---APSWHGLINSPLL 306

The following BLAST results are available for this feature:
BLAST of CsGy1G013030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147273.12.0e-13399.68PREDICTED: dof zinc finger protein DOF2.1-like [Cucumis sativus] >KGN64763.1 hyp... [more]
XP_008464848.18.7e-8198.28PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis melo][more]
XP_023525316.15.3e-6255.90dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo][more]
XP_022998890.11.3e-6056.07dof zinc finger protein DOF2.1-like [Cucurbita maxima][more]
XP_022949431.16.7e-5754.83dof zinc finger protein DOF5.3-like [Cucurbita moschata][more]
BLAST of CsGy1G013030 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60200.16.8e-2753.39TARGET OF MONOPTEROS 6[more]
AT2G28510.17.5e-2660.00Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.11.3e-2580.70Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.16.3e-2580.70Dof-type zinc finger DNA-binding family protein[more]
AT3G45610.12.4e-2459.52Dof-type zinc finger DNA-binding family protein[more]
BLAST of CsGy1G013030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84TE9|DOF53_ARATH1.2e-2553.39Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV... [more]
sp|Q8LE43|DOF21_ARATH1.4e-2460.00Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV... [more]
sp|O24463|PBF_MAIZE1.4e-2484.21Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1[more]
sp|Q8LAP8|DOF46_ARATH2.3e-2480.70Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV... [more]
sp|Q9SXG8|DOF1_ORYSJ5.1e-2485.45Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ... [more]
BLAST of CsGy1G013030 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSJ8|A0A0A0LSJ8_CUCSA1.3e-13399.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089510 PE=4 SV=1[more]
tr|A0A1S3CMI2|A0A1S3CMI2_CUCME5.8e-8198.28dof zinc finger protein DOF5.3-like OS=Cucumis melo OX=3656 GN=LOC103502622 PE=4... [more]
tr|A0A2C9V2G5|A0A2C9V2G5_MANES6.7e-4548.93Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G140300 PE=4 SV=... [more]
tr|A0A2C9W0C2|A0A2C9W0C2_MANES1.5e-4449.23Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G026400 PE=4 SV=... [more]
tr|A0A2I4EHM5|A0A2I4EHM5_9ROSI2.5e-4443.55dof zinc finger protein DOF2.1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC1... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013030.1CsGy1G013030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 40..96
e-value: 2.5E-34
score: 117.1
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 44..80
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 26..96
e-value: 5.0E-31
score: 337.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 42..96
score: 29.655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..122
NoneNo IPR availablePANTHERPTHR31992:SF69SUBFAMILY NOT NAMEDcoord: 12..273
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 12..273

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G013030Cla005059Watermelon (97103) v1cgybwmB012
CsGy1G013030Cla000540Watermelon (97103) v1cgybwmB072
CsGy1G013030Csa6G289740Cucumber (Chinese Long) v2cgybcuB046
CsGy1G013030Csa1G089510Cucumber (Chinese Long) v2cgybcuB001
CsGy1G013030MELO3C025737Melon (DHL92) v3.5.1cgybmeB009
CsGy1G013030ClCG03G002430Watermelon (Charleston Gray)cgybwcgB035
CsGy1G013030ClCG02G020850Watermelon (Charleston Gray)cgybwcgB032
CsGy1G013030CSPI06G16150Wild cucumber (PI 183967)cgybcpiB043
CsGy1G013030CSPI01G12970Wild cucumber (PI 183967)cgybcpiB001
CsGy1G013030CmaCh01G005270Cucurbita maxima (Rimu)cgybcmaB110
CsGy1G013030CmaCh02G008660Cucurbita maxima (Rimu)cgybcmaB124
CsGy1G013030CmaCh13G002000Cucurbita maxima (Rimu)cgybcmaB061
CsGy1G013030CmoCh01G005580Cucurbita moschata (Rifu)cgybcmoB104
CsGy1G013030CmoCh02G008660Cucurbita moschata (Rifu)cgybcmoB114
CsGy1G013030CmoCh13G002050Cucurbita moschata (Rifu)cgybcmoB057
CsGy1G013030Lsi10G013050Bottle gourd (USVL1VR-Ls)cgyblsiB003
CsGy1G013030Lsi02G014500Bottle gourd (USVL1VR-Ls)cgyblsiB020
CsGy1G013030Cp4.1LG02g12630Cucurbita pepo (Zucchini)cgybcpeB090
CsGy1G013030Cp4.1LG16g05560Cucurbita pepo (Zucchini)cgybcpeB036
CsGy1G013030Cp4.1LG00g03110Cucurbita pepo (Zucchini)cgybcpeB004
CsGy1G013030MELO3C025737.2Melon (DHL92) v3.6.1cgybmedB008
CsGy1G013030MELO3C005001.2Melon (DHL92) v3.6.1cgybmedB009
CsGy1G013030CsaV3_6G021510Cucumber (Chinese Long) v3cgybcucB050
CsGy1G013030CsaV3_1G013100Cucumber (Chinese Long) v3cgybcucB002
CsGy1G013030Cla97C02G046880Watermelon (97103) v2cgybwmbB030
CsGy1G013030Cla97C03G053460Watermelon (97103) v2cgybwmbB034
CsGy1G013030Bhi08G000247Wax gourdcgybwgoB046
CsGy1G013030Bhi10G000488Wax gourdcgybwgoB017
CsGy1G013030Carg12302Silver-seed gourdcarcgybB0449
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsGy1G013030CsGy6G015670Cucumber (Gy14) v2cgybcgybB040
The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G013030Melon (DHL92) v3.5.1cgybmeB010