Carg12302 (gene) Silver-seed gourd

Overview
NameCarg12302
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDof zinc finger protein like
LocationCucurbita_argyrosperma_scaffold_074 : 186345 .. 187296 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTCCTCCTCCTCCTCCACCTTCATCAGCTCAGCTCAGCTCAACTCAGGTCAGCTATGGATCTCTCCACCGCCGTCCACCACCAGGTAATTAACCATTCTCCGACATGGGTTGTCCTCAATTTTGTATTATTCTCATTAATTTATGTCTAATTATTATTCCATAGGAAATTGAACAACAACAACATTCAAAACCCTCACTAGACCAAACTAGAAAGCCAAGGCCACAACCAAAGCAAGCCTTGAAATGCCCAAGATGTGATTCACCCAACACCAAATTTTGCTACTACAACAACTACAGCCTCTCCCAACCCCGCTACTTTTGCAAATCCTGCCGCCGTTACTGGACTCAAGGCGGCACCCTCCGCAACGTCCCCGTCGGCGGCGGCTGTCGTAAAAACAAAAGATCCTTCTCCTCCGCTAACTCATCGTCATTATCATCATCATCATCATCGAAAAAACCCCAAGATCATCCCTTTGCCGCTGCCGCAGCGGCGGCGGCGGCTACCGTCTTACCTCATCTCTCCTATGACCACCAAGGGTTGGCATTCGCTAGGCTTCACAAAAACTCATGTGGGTCTGTTACTCCAACGTTCAACGACTTTGATTTCCCTACTTTGGGAATGCCAAACGGTGACATTTTGAATGGGTTCCCGTATAATTCTCAAGGGATGTATTACGACAATAACAACAATAACAACATAGGTGGAATCGAAAGTGGGATAGATCAGATGAGATTACATCCGTACGATCAAGATCATCATGCTACGACGACAGCAGTGACGGTGACGACCATGAAGCACGAGGTTTACAACGCGGGTGACGAAAGTAAAATCCTTTGGGGTTATGCAAATAATAATGGAATTATGGATTCAAATATGATGATGGGTATGGATTTTGGGTTTAGTAATGCTTCTTCATGGCATGGCCTTCTCAATAGCCCACTAATGTAA

mRNA sequence

TCCTCCTCCTCCTCCTCCACCTTCATCAGCTCAGCTCAGCTCAACTCAGGTCAGCTATGGATCTCTCCACCGCCGTCCACCACCAGGAAATTGAACAACAACAACATTCAAAACCCTCACTAGACCAAACTAGAAAGCCAAGGCCACAACCAAAGCAAGCCTTGAAATGCCCAAGATGTGATTCACCCAACACCAAATTTTGCTACTACAACAACTACAGCCTCTCCCAACCCCGCTACTTTTGCAAATCCTGCCGCCGTTACTGGACTCAAGGCGGCACCCTCCGCAACGTCCCCGTCGGCGGCGGCTGTCGTAAAAACAAAAGATCCTTCTCCTCCGCTAACTCATCGTCATTATCATCATCATCATCATCGAAAAAACCCCAAGATCATCCCTTTGCCGCTGCCGCAGCGGCGGCGGCGGCTACCGTCTTACCTCATCTCTCCTATGACCACCAAGGGTTGGCATTCGCTAGGCTTCACAAAAACTCATGTGGGTCTGTTACTCCAACGTTCAACGACTTTGATTTCCCTACTTTGGGAATGCCAAACGGTGACATTTTGAATGGGTTCCCGTATAATTCTCAAGGGATGTATTACGACAATAACAACAATAACAACATAGGTGGAATCGAAAGTGGGATAGATCAGATGAGATTACATCCGTACGATCAAGATCATCATGCTACGACGACAGCAGTGACGGTGACGACCATGAAGCACGAGGTTTACAACGCGGGTGACGAAAGTAAAATCCTTTGGGGTTATGCAAATAATAATGGAATTATGGATTCAAATATGATGATGGGTATGGATTTTGGGTTTAGTAATGCTTCTTCATGGCATGGCCTTCTCAATAGCCCACTAATGTAA

Coding sequence (CDS)

ATGGATCTCTCCACCGCCGTCCACCACCAGGAAATTGAACAACAACAACATTCAAAACCCTCACTAGACCAAACTAGAAAGCCAAGGCCACAACCAAAGCAAGCCTTGAAATGCCCAAGATGTGATTCACCCAACACCAAATTTTGCTACTACAACAACTACAGCCTCTCCCAACCCCGCTACTTTTGCAAATCCTGCCGCCGTTACTGGACTCAAGGCGGCACCCTCCGCAACGTCCCCGTCGGCGGCGGCTGTCGTAAAAACAAAAGATCCTTCTCCTCCGCTAACTCATCGTCATTATCATCATCATCATCATCGAAAAAACCCCAAGATCATCCCTTTGCCGCTGCCGCAGCGGCGGCGGCGGCTACCGTCTTACCTCATCTCTCCTATGACCACCAAGGGTTGGCATTCGCTAGGCTTCACAAAAACTCATGTGGGTCTGTTACTCCAACGTTCAACGACTTTGATTTCCCTACTTTGGGAATGCCAAACGGTGACATTTTGAATGGGTTCCCGTATAATTCTCAAGGGATGTATTACGACAATAACAACAATAACAACATAGGTGGAATCGAAAGTGGGATAGATCAGATGAGATTACATCCGTACGATCAAGATCATCATGCTACGACGACAGCAGTGACGGTGACGACCATGAAGCACGAGGTTTACAACGCGGGTGACGAAAGTAAAATCCTTTGGGGTTATGCAAATAATAATGGAATTATGGATTCAAATATGATGATGGGTATGGATTTTGGGTTTAGTAATGCTTCTTCATGGCATGGCCTTCTCAATAGCCCACTAATGTAA

Protein sequence

MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAAAAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMYYDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANNNGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Homology
[Close]
BLAST of Carg12302 vs. NCBI nr
Match: XP_023525316.1 (dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437.6 bits (1124), Expect = 3.1e-119
Identity = 238/271 (87.82%), Postives = 241/271 (88.93%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AV+HQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVNHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           YFCKSCRRYWTQGGTLRNVPVGGGCR        XXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCR----KNKRXXXXXXXXXXXXXXXXXXXXXPFAAA 120

Query: 121 XXXXXLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
                LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQGMY
Sbjct: 121 AVATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQGMY 180

Query: 181 XXXXXXXXIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
                   IGGIES IDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKI+WGYANN
Sbjct: 181 -YDNNNNNIGGIESAIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKIVWGYANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 266

[Close]
BLAST of Carg12302 vs. NCBI nr
Match: XP_022998890.1 (dof zinc finger protein DOF2.1-like [Cucurbita maxima])

HSP 1 Score: 436.8 bits (1122), Expect = 5.4e-119
Identity = 246/271 (90.77%), Postives = 248/271 (91.51%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIE QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIE-QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           YFCKSCRRYWTQGGTLRN+PVGGGCR        XXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 61  YFCKSCRRYWTQGGTLRNIPVGGGCR------KNXXXXXXXXXXXXXXXXXXXXXXDHPF 120

Query: 121 XXXXXLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
                LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQGMY
Sbjct: 121 ASAAALPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQGMY 180

Query: 181 XXXXXXXXIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           XXXXXXXX GGIESGIDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKILWG ANN
Sbjct: 181 XXXXXXXXXGGIESGIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKILWGIANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 264

[Close]
BLAST of Carg12302 vs. NCBI nr
Match: XP_022949431.1 (dof zinc finger protein DOF5.3-like [Cucurbita moschata])

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 251/271 (92.62%), Postives = 252/271 (92.99%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIE QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIE-QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           YFCKSCRRYWTQGGTLRNVPVGGGCR         XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCR------KNKXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
           XX   LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQ M 
Sbjct: 121 XXATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQEMX 180

Query: 181 XXXXXXXXIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           XXXXXXXX GGIESGIDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKILWGYANN
Sbjct: 181 XXXXXXXXXGGIESGIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKILWGYANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 264

[Close]
BLAST of Carg12302 vs. NCBI nr
Match: XP_004147273.1 (PREDICTED: dof zinc finger protein DOF2.1-like [Cucumis sativus] >KGN64763.1 hypothetical protein Csa_1G089510 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 3.8e-56
Identity = 178/327 (54.43%), Postives = 188/327 (57.49%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQ--------QHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYN 60
           MDL TA HHQE+E          Q+SK    Q RK RPQP+QALKCPRCDS NTKFCYYN
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKD--HQVRKARPQPEQALKCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG           XXXXXXXXXXXXXXXXXXX
Sbjct: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG-----------XXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXLP-HLSYDHQ----GLAFARLHKNSC--GSVTPTFNDFDFPTLGMPN 180
           XXXX         LP  LSYDHQ     LAFARLHKNSC  GSV PTFNDFDF  LGMPN
Sbjct: 121 XXXXDHPFGASTALPGQLSYDHQAHDLSLAFARLHKNSCSNGSV-PTFNDFDFSILGMPN 180

Query: 181 GDILN--GFPYNSQGMYXXXXXXXXIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMK-- 240
           GD+LN  GF YNSQ +Y          GIES  DQMRL PYD                  
Sbjct: 181 GDVLNGGGFAYNSQSLYYGNDNNMG-AGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXX 240

Query: 241 --------------HEVYNAGDESKILWGYAN-------------------NNGIMDSNM 272
                          E+ N  D+SKILWGY N                     G MD + 
Sbjct: 241 XXXXXXXXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDS 300

[Close]
BLAST of Carg12302 vs. NCBI nr
Match: XP_007132171.1 (hypothetical protein PHAVU_011G071900g [Phaseolus vulgaris] >AGV54425.1 dof zinc finger protein DOF2.1-like protein [Phaseolus vulgaris] >ESW04165.1 hypothetical protein PHAVU_011G071900g [Phaseolus vulgaris])

HSP 1 Score: 187.2 bits (474), Expect = 7.4e-44
Identity = 137/314 (43.63%), Postives = 160/314 (50.96%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSK---PSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLS 60
           MD ST  H Q   Q   +        Q RKPRPQP+QALKCPRCDS NTKFCYYNNYSLS
Sbjct: 1   MDPSTGQHQQMSNQSLENMLACSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLS 60

Query: 61  QPRYFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QPRYFCKSCRRYWT+GGTLRNVPVGGGCR                               
Sbjct: 61  QPRYFCKSCRRYWTKGGTLRNVPVGGGCR----------KNKRSSSSSTSKRIQDQGFTP 120

Query: 121 XXXXXXXXLPHLSYDHQG--LAFARLHKNSCGSVTPTFNDFDFPTLGMPNG---DILN-- 180
                   LP LSYD     LA ARL K SCG +   +++ DF  LG       DIL   
Sbjct: 121 NPNNPLTGLPSLSYDSSDLTLALARLQKQSCGQL--GYDEHDFSILGNHTSTPCDILGNP 180

Query: 181 --------------------GFPYNSQGMYXXXXXXXXIGGIES-----GIDQMRLHPYD 240
                               G   N Q +Y        +G +++     G+    + PYD
Sbjct: 181 GMHHSSTNPGFMDSLRSGFLGTQSNIQNLY-YGYGNGDMGEVDNGNACGGVSGEMMLPYD 240

Query: 241 QDHH-ATTTAVTVTTMKHEVYNAGD--ESKILWGYA-NNNGIMDSNMMMGMDFGFSN--- 272
           Q+   ATT AVTVTTMK E+ NA +  ES++LWG+    NG  D+N M  +D G +N   
Sbjct: 241 QEMSVATTQAVTVTTMKQELCNAREQSESRVLWGFPWQLNG--DTN-MGELDSGRANWNG 298

[Close]
BLAST of Carg12302 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 59/87 (67.82%), Postives = 68/87 (78.16%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQ-ALKCPRCDSPNTKFCYYNNYSLSQP 60
           M LS + +   ++  Q  KPS   T   RPQP + AL+CPRCDS NTKFCYYNNYSL+QP
Sbjct: 21  MGLSYSSNPTPLDNDQ-KKPS-PATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQP 80

Query: 61  RYFCKSCRRYWTQGGTLRNVPVGGGCR 87
           RYFCKSCRRYWT+GGTLRN+PVGGGCR
Sbjct: 81  RYFCKSCRRYWTKGGTLRNIPVGGGCR 105

[Close]
BLAST of Carg12302 vs. TAIR10
Match: AT5G65590.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 115.5 bits (288), Expect = 5.0e-26
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 0 

Query: 12 IEQQQHSKPSLDQTRKPR----PQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCR 71
          + +  H      QT+KP      Q +Q LKCPRC+SPNTKFCYYNNYSLSQPR+FCKSCR
Sbjct: 13 VPKPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCR 72

Query: 72 RYWTQGGTLRNVPVGGGCR 87
          RYWT+GG LRNVP+GGGCR
Sbjct: 73 RYWTRGGALRNVPIGGGCR 91

[Close]
BLAST of Carg12302 vs. TAIR10
Match: AT3G45610.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 111.3 bits (277), Expect = 9.4e-25
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 13 EQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQ 72
          +  Q+ K  L  TR P P P+Q+L+CPRCDS NTKFCYYNNYSLSQPRYFCKSCRRYWT+
Sbjct: 19 QDYQNQKKPLSATR-PAP-PEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTK 78

Query: 73 GGTLRNVPVGGGCR 87
          GG LRN+P+GG  R
Sbjct: 79 GGILRNIPIGGAYR 90

[Close]
BLAST of Carg12302 vs. TAIR10
Match: AT3G21270.1 (DOF zinc finger protein 2)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 33 KQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCR 87
          ++ LKCPRCDSPNTKFCYYNNY+LSQPR+FCKSCRRYWT+GG LRNVPVGGG R
Sbjct: 26 QEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSR 79

[Close]
BLAST of Carg12302 vs. TAIR10
Match: AT1G07640.3 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-24
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 36  LKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCR 87
           LKCPRCDS NTKFCYYNNY+L+QPR+FCK CRRYWTQGG LRNVPVGGGCR
Sbjct: 85  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCR 135

[Close]
BLAST of Carg12302 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 26  RKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGC 85
           RKPRPQ  +ALKCPRCDS NTKFCYYNNYS+SQPRYFCK+CRRYWT GGTLRNVP+GGGC
Sbjct: 50  RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGC 109

Query: 86  R 87
           R
Sbjct: 110 R 110

[Close]
BLAST of Carg12302 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.1e-25
Identity = 59/87 (67.82%), Postives = 68/87 (78.16%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQ-ALKCPRCDSPNTKFCYYNNYSLSQP 60
           M LS + +   ++  Q  KPS   T   RPQP + AL+CPRCDS NTKFCYYNNYSL+QP
Sbjct: 21  MGLSYSSNPTPLDNDQ-KKPS-PATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQP 80

Query: 61  RYFCKSCRRYWTQGGTLRNVPVGGGCR 87
           RYFCKSCRRYWT+GGTLRN+PVGGGCR
Sbjct: 81  RYFCKSCRRYWTKGGTLRNIPVGGGCR 105

[Close]
BLAST of Carg12302 vs. Swiss-Prot
Match: sp|Q9LSL6|DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.0e-25
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 0 

Query: 12 IEQQQHSKPSLDQTRKPR----PQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCR 71
          + +  H      QT+KP      Q +Q LKCPRC+SPNTKFCYYNNYSLSQPR+FCKSCR
Sbjct: 13 VPKPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCR 72

Query: 72 RYWTQGGTLRNVPVGGGCR 87
          RYWT+GG LRNVP+GGGCR
Sbjct: 73 RYWTRGGALRNVPIGGGCR 91

[Close]
BLAST of Carg12302 vs. Swiss-Prot
Match: sp|Q9M1E6|DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 13 EQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQ 72
          +  Q+ K  L  TR P P P+Q+L+CPRCDS NTKFCYYNNYSLSQPRYFCKSCRRYWT+
Sbjct: 19 QDYQNQKKPLSATR-PAP-PEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTK 78

Query: 73 GGTLRNVPVGGGCR 87
          GG LRN+P+GG  R
Sbjct: 79 GGILRNIPIGGAYR 90

[Close]
BLAST of Carg12302 vs. Swiss-Prot
Match: sp|Q94AR6|DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-23
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 33 KQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCR 87
          ++ LKCPRCDSPNTKFCYYNNY+LSQPR+FCKSCRRYWT+GG LRNVPVGGG R
Sbjct: 26 QEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSR 79

[Close]
BLAST of Carg12302 vs. TrEMBL
Match: tr|A0A0A0LSJ8|A0A0A0LSJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089510 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 178/327 (54.43%), Postives = 188/327 (57.49%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQ--------QHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYN 60
           MDL TA HHQE+E          Q+SK    Q RK RPQP+QALKCPRCDS NTKFCYYN
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKD--HQVRKARPQPEQALKCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG           XXXXXXXXXXXXXXXXXXX
Sbjct: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVG-----------XXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXLP-HLSYDHQ----GLAFARLHKNSC--GSVTPTFNDFDFPTLGMPN 180
           XXXX         LP  LSYDHQ     LAFARLHKNSC  GSV PTFNDFDF  LGMPN
Sbjct: 121 XXXXDHPFGASTALPGQLSYDHQAHDLSLAFARLHKNSCSNGSV-PTFNDFDFSILGMPN 180

Query: 181 GDILN--GFPYNSQGMYXXXXXXXXIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMK-- 240
           GD+LN  GF YNSQ +Y          GIES  DQMRL PYD                  
Sbjct: 181 GDVLNGGGFAYNSQSLYYGNDNNMG-AGIESNGDQMRLQPYDXXXXXXXXXXXXXXXXXX 240

Query: 241 --------------HEVYNAGDESKILWGYAN-------------------NNGIMDSNM 272
                          E+ N  D+SKILWGY N                     G MD + 
Sbjct: 241 XXXXXXXXXXLFGGREMNNGSDQSKILWGYPNWQXXXXXXXXXXXXXXXXXXXGAMDFDS 300

[Close]
BLAST of Carg12302 vs. TrEMBL
Match: tr|A0A2N9FRI5|A0A2N9FRI5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17715 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44
Identity = 135/286 (47.20%), Postives = 156/286 (54.55%), Query Frame = 0 

Query: 26  RKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGC 85
           RKPRPQP+QALKCPRCDS NTKFCYYNNYSLSQPRYFCKSCRRYWT+GGTLRNVPVGGGC
Sbjct: 14  RKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 73

Query: 86  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPHLSYDHQ---GLAFARLH 145
           R                XXXXXX                  P LSYD      LAFARL 
Sbjct: 74  R------------KNKRXXXXXXKRTQDQPLTPNTNPHTSFPPLSYDSPNDLSLAFARLQ 133

Query: 146 KNSCGSVTPTFNDFDFPTLGMPNG---DIL--------------------NGF---PYNS 205
           K SCG +   F+D D P +G  N    DIL                    +GF     N 
Sbjct: 134 KQSCGQL--GFDDHDLPIMGNANSSHCDILGNHGIHNSAATTPGFFDALRSGFLESHNNF 193

Query: 206 QGMYXXXXXXXXIGGIES---GIDQMRLHPYD--QDHHATTTAVTVTTMKHEVYNAGD-E 265
           Q MY         G +++   G+    + PY+  Q  +ATTTAVTVTTMK E+ N  + +
Sbjct: 194 QNMYYGYGNGNMGGEVDNGGVGVSGEMVMPYEDHQMSNATTTAVTVTTMKQELCNGREND 253

Query: 266 SKILWGY--ANNNGIMDSNM---MMGMDFGFSNASSWHGLLNSPLM 272
           +++LWG+    NNG  D NM     G +     A SWHGLLNSPLM
Sbjct: 254 NRVLWGFPWQLNNG--DGNMGDIDSGRESWNGLAPSWHGLLNSPLM 283

[Close]
BLAST of Carg12302 vs. TrEMBL
Match: tr|T2DNA4|T2DNA4_PHAVU (Dof zinc finger protein DOF2.1-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G071900g PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.9e-44
Identity = 137/314 (43.63%), Postives = 160/314 (50.96%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSK---PSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLS 60
           MD ST  H Q   Q   +        Q RKPRPQP+QALKCPRCDS NTKFCYYNNYSLS
Sbjct: 1   MDPSTGQHQQMSNQSLENMLACSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLS 60

Query: 61  QPRYFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QPRYFCKSCRRYWT+GGTLRNVPVGGGCR                               
Sbjct: 61  QPRYFCKSCRRYWTKGGTLRNVPVGGGCR----------KNKRSSSSSTSKRIQDQGFTP 120

Query: 121 XXXXXXXXLPHLSYDHQG--LAFARLHKNSCGSVTPTFNDFDFPTLGMPNG---DILN-- 180
                   LP LSYD     LA ARL K SCG +   +++ DF  LG       DIL   
Sbjct: 121 NPNNPLTGLPSLSYDSSDLTLALARLQKQSCGQL--GYDEHDFSILGNHTSTPCDILGNP 180

Query: 181 --------------------GFPYNSQGMYXXXXXXXXIGGIES-----GIDQMRLHPYD 240
                               G   N Q +Y        +G +++     G+    + PYD
Sbjct: 181 GMHHSSTNPGFMDSLRSGFLGTQSNIQNLY-YGYGNGDMGEVDNGNACGGVSGEMMLPYD 240

Query: 241 QDHH-ATTTAVTVTTMKHEVYNAGD--ESKILWGYA-NNNGIMDSNMMMGMDFGFSN--- 272
           Q+   ATT AVTVTTMK E+ NA +  ES++LWG+    NG  D+N M  +D G +N   
Sbjct: 241 QEMSVATTQAVTVTTMKQELCNAREQSESRVLWGFPWQLNG--DTN-MGELDSGRANWNG 298

[Close]
BLAST of Carg12302 vs. TrEMBL
Match: tr|A0A067L6S2|A0A067L6S2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05589 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43
Identity = 149/310 (48.06%), Postives = 174/310 (56.13%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSKPSL------DQTRKPRPQPKQALKCPRCDSPNTKFCYYNNY 60
           MD S+  H    E   HS  S+       Q RKPRPQP+QALKCPRCDS NTKFCYYNNY
Sbjct: 1   MDPSSGQHQ---EMSSHSLESMLVCTKPHQERKPRPQPEQALKCPRCDSTNTKFCYYNNY 60

Query: 61  SLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           SLSQPRYFCKSCRRYWT+GGTLRNVPVGGGCR             XXXXXXXXXXXXXXX
Sbjct: 61  SLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCR------------KXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXLPHLSYDHQG--LAFARLHKNSCGSVTPTFNDFDFPTLGMPN---GDIL 180
                      LP L+YD     LAFARL K S G +   F+D D P LG PN    D+L
Sbjct: 121 LNSNNTNPLTSLPSLTYDSNDLTLAFARLQKQSNGQL--GFDDRDLPILGNPNNTHSDML 180

Query: 181 NGFP------------------YNSQGMYXXXXXXXXIGGIES----GIDQMRLHPYDQD 240
              P                   N Q +Y        +G +E+    G     + PY+  
Sbjct: 181 INPPAPFLEALRTGFLDTQNNNNNFQNLY-FGYGNGNMGDVENSGVCGNSGEMMIPYEDM 240

Query: 241 HHATTTAVTVTTMKHEVYNAGDE---SKILWGY---ANNNGIMDSNMMMGMDFGFSNASS 272
             A T AVTVTTMK E+ +  ++   SKILWG+    N NG +DS     ++ GF  +++
Sbjct: 241 SSAGTQAVTVTTMKQEMCSDREDDQTSKILWGFPWQLNGNGDLDSGKESWIN-GF-GSTN 290

[Close]
BLAST of Carg12302 vs. TrEMBL
Match: tr|A0A1S3VKB9|A0A1S3VKB9_VIGRR (dof zinc finger protein DOF2.1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106776022 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 152/315 (48.25%), Postives = 174/315 (55.24%), Query Frame = 0 

Query: 1   MDLSTAVHHQEIEQQQHSK---PSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLS 60
           MD ST  H Q   Q   +        Q RKPRPQP+QALKCPRCDS NTKFCYYNNYSLS
Sbjct: 1   MDPSTGQHQQMSNQSLENMLACSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLS 60

Query: 61  QPRYFCKSCRRYWTQGGTLRNVPVGGGCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           QPRYFCKSCRRYWT+GGTLRNVPVGG         XXXXXXXXXXXXXXXXX        
Sbjct: 61  QPRYFCKSCRRYWTKGGTLRNVPVGG---------XXXXXXXXXXXXXXXXXIQDQGFTP 120

Query: 121 XXXXXXXXLPHLSYDHQG--LAFARLHKNSCGSVTPTFNDFDFPTLGMPNG---DILN-- 180
                    P LSYD     LA ARL K SCG +   +++ DF  LG P     DIL   
Sbjct: 121 NPNNPLTGFPSLSYDSSDLTLALARLQKQSCGQL--GYDEHDFSILGNPTSTPCDILGNP 180

Query: 181 --------------------GFPYNSQGMYXXXXXXXXIGGIE------SGIDQMRLHPY 240
                               G   N Q +Y        +G ++      +G+    L PY
Sbjct: 181 GMHHSSTNPGFLDSLRSGFLGTQSNVQNLY-YGYGNGDMGEVDNGNACGNGVSGEMLLPY 240

Query: 241 DQDHH-ATTTAVTVTTMKHEVYNAGD--ESKILWGYA-NNNGIMDSNMMMGMDFGFSN-- 272
           DQ+   ATT AVTVTTMK E+ NA +  ES++LWG+    NG  D+N M  +D G +N  
Sbjct: 241 DQEMSVATTQAVTVTTMKQELCNAREQSESRVLWGFPWQLNG--DTN-MAELDSGRANWN 300

The following BLAST results are available for this feature:
BLAST of Carg12302 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525316.13.1e-11987.82dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo][more]
XP_022998890.15.4e-11990.77dof zinc finger protein DOF2.1-like [Cucurbita maxima][more]
XP_022949431.13.5e-11892.62dof zinc finger protein DOF5.3-like [Cucurbita moschata][more]
XP_004147273.13.8e-5654.43PREDICTED: dof zinc finger protein DOF2.1-like [Cucumis sativus] >KGN64763.1 hyp... [more]
XP_007132171.17.4e-4443.63hypothetical protein PHAVU_011G071900g [Phaseolus vulgaris] >AGV54425.1 dof zinc... [more]
BLAST of Carg12302 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60200.11.7e-2667.82TARGET OF MONOPTEROS 6[more]
AT5G65590.15.0e-2667.09Dof-type zinc finger DNA-binding family protein[more]
AT3G45610.19.4e-2570.27Dof-type zinc finger DNA-binding family protein[more]
AT3G21270.11.2e-2485.19DOF zinc finger protein 2[more]
AT1G07640.32.1e-2488.24Dof-type zinc finger DNA-binding family protein[more]
BLAST of Carg12302 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O24463|PBF_MAIZE1.5e-2786.89Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1[more]
sp|Q84TE9|DOF53_ARATH3.1e-2567.82Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV... [more]
sp|Q9LSL6|DOF57_ARATH9.0e-2567.09Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV... [more]
sp|Q9M1E6|DOF32_ARATH1.7e-2370.27Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV... [more]
sp|Q94AR6|DOF31_ARATH2.2e-2385.19Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV... [more]
BLAST of Carg12302 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSJ8|A0A0A0LSJ8_CUCSA2.5e-5654.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089510 PE=4 SV=1[more]
tr|A0A2N9FRI5|A0A2N9FRI5_FAGSY2.9e-4447.20Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17715 PE=4 SV=1[more]
tr|T2DNA4|T2DNA4_PHAVU4.9e-4443.63Dof zinc finger protein DOF2.1-like protein OS=Phaseolus vulgaris OX=3885 GN=PHA... [more]
tr|A0A067L6S2|A0A067L6S2_JATCU1.9e-4348.06Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05589 PE=4 SV=1[more]
tr|A0A1S3VKB9|A0A1S3VKB9_VIGRR1.6e-4248.25dof zinc finger protein DOF2.1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12302-RACarg12302-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 34..90
e-value: 1.1E-33
score: 115.0
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 38..74
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 23..90
e-value: 5.0E-29
score: 319.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 36..90
score: 29.497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..110
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 11..266
NoneNo IPR availablePANTHERPTHR31992:SF69SUBFAMILY NOT NAMEDcoord: 11..266

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12302Cla005059Watermelon (97103) v1carwmB0440
Carg12302Cla000540Watermelon (97103) v1carwmB0443
Carg12302Csa1G089510Cucumber (Chinese Long) v2carcuB0472
Carg12302MELO3C025737Melon (DHL92) v3.5.1carmeB0447
Carg12302ClCG02G020850Watermelon (Charleston Gray)carwcgB0434
Carg12302ClCG03G002430Watermelon (Charleston Gray)carwcgB0436
Carg12302CSPI01G12970Wild cucumber (PI 183967)carcpiB0477
Carg12302CSPI06G16150Wild cucumber (PI 183967)carcpiB0480
Carg12302Cucsa.207460Cucumber (Gy14) v1carcgyB0511
Carg12302CmaCh13G002000Cucurbita maxima (Rimu)carcmaB0610
Carg12302CmaCh02G008660Cucurbita maxima (Rimu)carcmaB0617
Carg12302CmaCh01G005270Cucurbita maxima (Rimu)carcmaB0613
Carg12302CmoCh13G002050Cucurbita moschata (Rifu)carcmoB0594
Carg12302CmoCh01G005580Cucurbita moschata (Rifu)carcmoB0596
Carg12302Lsi10G013050Bottle gourd (USVL1VR-Ls)carlsiB402
Carg12302Lsi02G014500Bottle gourd (USVL1VR-Ls)carlsiB403
Carg12302Cp4.1LG02g12630Cucurbita pepo (Zucchini)carcpeB0622
Carg12302CsGy1G013030Cucumber (Gy14) v2carcgybB0449
Carg12302MELO3C005001.2Melon (DHL92) v3.6.1carmedB0451
Carg12302MELO3C025737.2Melon (DHL92) v3.6.1carmedB0449
Carg12302CsaV3_1G013100Cucumber (Chinese Long) v3carcucB0474
Carg12302Cla97C02G046880Watermelon (97103) v2carwmbB0465
Carg12302Cla97C03G053460Watermelon (97103) v2carwmbB0467
Carg12302Bhi10G000488Wax gourdcarwgoB0531
Carg12302Bhi08G000247Wax gourdcarwgoB0532
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12302Carg03264Silver-seed gourdcarcarB355
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12302Silver-seed gourdcarcarB448
Carg12302Cucumber (Gy14) v2carcgybB0451
Carg12302Cucurbita pepo (Zucchini)carcpeB0620
Carg12302Wild cucumber (PI 183967)carcpiB0479
Carg12302Cucumber (Chinese Long) v2carcuB0474
Carg12302Cucumber (Chinese Long) v3carcucB0476
Carg12302Melon (DHL92) v3.5.1carmeB0449
Carg12302Watermelon (Charleston Gray)carwcgB0432
Carg12302Watermelon (97103) v1carwmB0439
Carg12302Wax gourdcarwgoB0528