CsGy1G012730 (gene) Cucumber (Gy14) v2

NameCsGy1G012730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 8143803 .. 8144324 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTGTGCCACTTCATCCTCGAGCTCTAATAGGGTGCAAGGGCATTGGAAGCCTCTTAGGAAGGCCAATTAGGTCCCTCCAAAGGCGAAAATTTGCCTCTGGAAGCTTTTAAATGATGTTATTCCCTCTAAGCTTAACCTCTTGAAGATTATTAACAATCCACTTTGTTTTTTTGTAGGGATTGTGAGGAATCGGCTTTGCATATTTTGTGGGGATGCAAGTTTGCTAGAAGAGTCTGGAGGTTATCCCATTCTGCTTTGGGACTGAGCTGTGGAAAATTTAAGTGAGGAAGAGATTAATGTGAGCATTTTAATTTGGTGGGGTCTCTGGTCTTGCAGAAATAATTGGGTGGAATTTTTTTTTACGGCAGAGTCGTCTGTTGGTGTCGAGCTTGCTTTGAAAATTCATTGACAGGACTATCCAAGAATCCATGGCAATTGTCTCGAGCTCCCTTGATTTGGCGCCTAAGAAGGAGTTGAGAGTCTCAACACTTGGAAGCAGCTTAAGAATGGCTTGA

mRNA sequence

ATGAAGCTTGTGCCACTTCATCCTCGAGCTCTAATAGGGTGCAAGGGCATTGGAAGCCTCTTAGGAAGGCCAATTAGGACTATCCAAGAATCCATGGCAATTGTCTCGAGCTCCCTTGATTTGGCGCCTAAGAAGGAGTTGAGAGTCTCAACACTTGGAAGCAGCTTAAGAATGGCTTGA

Coding sequence (CDS)

ATGAAGCTTGTGCCACTTCATCCTCGAGCTCTAATAGGGTGCAAGGGCATTGGAAGCCTCTTAGGAAGGCCAATTAGGACTATCCAAGAATCCATGGCAATTGTCTCGAGCTCCCTTGATTTGGCGCCTAAGAAGGAGTTGAGAGTCTCAACACTTGGAAGCAGCTTAAGAATGGCTTGA

Protein sequence

MKLVPLHPRALIGCKGIGSLLGRPIRTIQESMAIVSSSLDLAPKKELRVSTLGSSLRMA
BLAST of CsGy1G012730 vs. NCBI nr
Match: KGN64736.1 (hypothetical protein Csa_1G084840 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-17
Identity = 59/94 (62.77%), Postives = 59/94 (62.77%), Query Frame = 0

Query: 1  MKLVPLHPRALIGCKGIGSLLGRPIR---------------------------------- 60
          MKLVPLHPRALIGCKGIGSLLGRPIR                                  
Sbjct: 1  MKLVPLHPRALIGCKGIGSLLGRPIRDCEESALHILWGCKFARRVWRLSHSALGLSCGKF 60

BLAST of CsGy1G012730 vs. TrEMBL
Match: tr|A0A0A0LXK5|A0A0A0LXK5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G084840 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-17
Identity = 59/94 (62.77%), Postives = 59/94 (62.77%), Query Frame = 0

Query: 1  MKLVPLHPRALIGCKGIGSLLGRPIR---------------------------------- 60
          MKLVPLHPRALIGCKGIGSLLGRPIR                                  
Sbjct: 1  MKLVPLHPRALIGCKGIGSLLGRPIRDCEESALHILWGCKFARRVWRLSHSALGLSCGKF 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64736.14.9e-1762.77hypothetical protein Csa_1G084840 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LXK5|A0A0A0LXK5_CUCSA3.2e-1762.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G084840 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G012730.1CsGy1G012730.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G012730Csa1G084840Cucumber (Chinese Long) v2cgybcuB001
CsGy1G012730CsaV3_1G012880Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None