CsGy1G012370 (gene) Cucumber (Gy14) v2

NameCsGy1G012370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionEukaryotic aspartyl protease family protein
LocationChr1 : 7782483 .. 7784280 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAAGAAAAGAAGCTTCTTTGAACGTGTGGGTCTTAAAGTTTTGTCCATATTATTATTGTTTGCTTTTCGGCAGCCGCAAACATCAACTTGGAGCCAACTTCATTCCATTATTACAAACATTTCAAATCTAGCTTGTAATCCACCTAACATTTTCATGACACAATATGAATCTTTTTTTAAAAAAAAATCAAAACAAATATACATAATAATTCAATTACAAGTTTTTAAAATTTAGTCTCTATATTTTTATTAATTTTGGTACGACAAATTAGAGATATATATGTAAATATGTTTAGAAAATGAATGGTGATGGGGAGAGATTTTGTTTGAAAGAAAAAAGAGAAAAAAGAAAAGGAAATATATTTGATTAGGATGTGAAAAATAGGGTATAAGGTGTTCCCACTTTGCATGAGAGAAAATGGTCAAACACGTGAGAGAGAGAGAGAGCAGATGTGCTTGAAGTTTCAGACAACAACACTGCTGGTGCTGGACATCACAAAAATTAGATATCAAAACAAGTTTATATTCATTTTCCAAACAAATCATACGTAATCTGATGTGTGAAACTTTGAATCATCCATCCTGCAGATATATTCTTTATTAACGTAACCTTTAGCTTGGATGTGACCAGTAGCTAATTCATCATGATTAATTCAATTTTGGTATGGGTTTTTACTCATATTTTTGAGGGACGGTTGATTACATTTCATATGGACACAACCTTTACGAATATTTCTTTTGTTTTTACTTCATTTATTGTTTTGTTTCAGATTTCACATTTCAATCCCTTTCATGTCCCTTTAAACCAGTTTAAGTTTAAAGTAGTTCCCACCAAACACTACGAAACCCCCCAACAAAAAAAAGTGGAATAAATGTGGTAATTATTTGTTATCTTTTTGGTAGAGATACAATTTCTATCCGGAATAATAGTACACTGCTACAAAAATAGACTTTCTTCACATTTGTAGTTTTAATTACTTGATGTTTTTTTAAAAAAAATGTAAAAACATCAAGAAATTGATGATTTCAAAGAAAAAATGTCAAGAATTTTTATAAAAAGGTGGAGATAGACAAATCTTTAACTTTCTTGATATTTTTTAAACGTCAAGTAATATCAATTAAATTCTTAATGTTTTTAAAACGTCAAGAATTTTATGAAAAGGCATAACGGAGGTAAGTTTTTTAATTTCTTGATATTTTTTAAACGTCAATTGAGATGTTTTTTTTGACGTTTTAAAAACATCAAAGTTCTATAACATAATGATAACAAAATATATATAATTTTTTTATAACCCCCAATTTCTCTTCCTCTTCCACGACAAAAATAAACACCAAATCCCTAACACTCTCTTCAAGCGACGGCAAATCCCAAGTTCTCAACCCTCTCCTGCGACAACCGATGACAACTGATGACAACCAGCGGCAACCCACTACCTCTCTCCTTCTATTTCATCCGTATTTCATCCTACTCGTTCAAAATCTCAGTCTCAAACTTCTTGAAAGAGAAAGAGCTGCGATTGTTGTGCTGGGCGAACTGCCTAAAGGGCGAAGACCTCAATGTTCCGCCTTTTGATTTTGATGAAAGGTACATAGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGGTACGTAGTATTCTTTTCTCTTTGTCGATTATCTTTGATTAAATTGTTTTATCTTGTTCCCTTCCATTTGGGGGTTTTCAGTTTATATTACGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTGTTGGACACTGGAAGTGATTTGTTTTGA

mRNA sequence

ATGTTAAAGAAAAGAAGCTTCTTTGAACGTGTGGGTCTTAAAGTTTTGTCCATATTATTATTGTTTGCTTTTCGGCAGCCGCAAACATCAACTTGGAGCCAACTTCATTCCATTATTACAAACATTTCAAATCTAGCTTATATATTCTTTATTAACATTTCACATTTCAATCCCTTTCATGTCCCTTTAAACCAGTTTAAGTTTAAAGGCGAAGACCTCAATGTTCCGCCTTTTGATTTTGATGAAAGGTACATAGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGTTTATATTACGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTGTTGGACACTGGAAGTGATTTGTTTTGA

Coding sequence (CDS)

ATGTTAAAGAAAAGAAGCTTCTTTGAACGTGTGGGTCTTAAAGTTTTGTCCATATTATTATTGTTTGCTTTTCGGCAGCCGCAAACATCAACTTGGAGCCAACTTCATTCCATTATTACAAACATTTCAAATCTAGCTTATATATTCTTTATTAACATTTCACATTTCAATCCCTTTCATGTCCCTTTAAACCAGTTTAAGTTTAAAGGCGAAGACCTCAATGTTCCGCCTTTTGATTTTGATGAAAGGTACATAGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGTTTATATTACGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTGTTGGACACTGGAAGTGATTTGTTTTGA

Protein sequence

MLKKRSFFERVGLKVLSILLLFAFRQPQTSTWSQLHSIITNISNLAYIFFINISHFNPFHVPLNQFKFKGEDLNVPPFDFDERYIVEGSARFRSRRKSLYYANVSVGMSSLDFLMVLDTGSDLF
BLAST of CsGy1G012370 vs. TAIR10
Match: AT3G51350.1 (Eukaryotic aspartyl protease family protein)

HSP 1 Score: 41.6 bits (96), Expect = 4.2e-04
Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 0

Query: 98  SLYYANVSVGMSSLDFLMVLDTGSDLF 125
           SLYYANVSVG     FL+ LDTGSDLF
Sbjct: 100 SLYYANVSVGTPPSSFLVALDTGSDLF 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT3G51350.14.2e-0474.07Eukaryotic aspartyl protease family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR033121PEPTIDASE_A1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G012370.1CsGy1G012370.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033121Peptidase family A1 domainPROSITEPS51767PEPTIDASE_A1coord: 100..124
score: 10.645

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G012370CSPI01G12350Wild cucumber (PI 183967)cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G012370Cucumber (Gy14) v2cgybcgybB025
CsGy1G012370Cucumber (Gy14) v2cgybcgybB035
CsGy1G012370Cucurbita maxima (Rimu)cgybcmaB074
CsGy1G012370Cucurbita maxima (Rimu)cgybcmaB086
CsGy1G012370Cucurbita maxima (Rimu)cgybcmaB125
CsGy1G012370Cucurbita maxima (Rimu)cgybcmaB142
CsGy1G012370Cucurbita moschata (Rifu)cgybcmoB068
CsGy1G012370Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G012370Cucurbita moschata (Rifu)cgybcmoB115
CsGy1G012370Cucurbita moschata (Rifu)cgybcmoB133
CsGy1G012370Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G012370Cucurbita pepo (Zucchini)cgybcpeB025
CsGy1G012370Cucurbita pepo (Zucchini)cgybcpeB066
CsGy1G012370Cucurbita pepo (Zucchini)cgybcpeB070
CsGy1G012370Cucumber (Chinese Long) v2cgybcuB001
CsGy1G012370Cucumber (Chinese Long) v2cgybcuB040
CsGy1G012370Bottle gourd (USVL1VR-Ls)cgyblsiB015
CsGy1G012370Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G012370Melon (DHL92) v3.5.1cgybmeB022
CsGy1G012370Melon (DHL92) v3.5.1cgybmeB076
CsGy1G012370Melon (DHL92) v3.6.1cgybmedB020
CsGy1G012370Melon (DHL92) v3.6.1cgybmedB072
CsGy1G012370Watermelon (Charleston Gray)cgybwcgB013
CsGy1G012370Watermelon (Charleston Gray)cgybwcgB045
CsGy1G012370Watermelon (97103) v1cgybwmB025
CsGy1G012370Watermelon (97103) v1cgybwmB044
CsGy1G012370Wild cucumber (PI 183967)cgybcpiB037
CsGy1G012370Silver-seed gourdcarcgybB0161
CsGy1G012370Silver-seed gourdcarcgybB0551
CsGy1G012370Silver-seed gourdcarcgybB0638
CsGy1G012370Silver-seed gourdcarcgybB0936
CsGy1G012370Cucumber (Chinese Long) v3cgybcucB002
CsGy1G012370Cucumber (Chinese Long) v3cgybcucB034
CsGy1G012370Cucumber (Chinese Long) v3cgybcucB045
CsGy1G012370Watermelon (97103) v2cgybwmbB002
CsGy1G012370Watermelon (97103) v2cgybwmbB024
CsGy1G012370Watermelon (97103) v2cgybwmbB043
CsGy1G012370Wax gourdcgybwgoB020
CsGy1G012370Wax gourdcgybwgoB049