CSPI01G12350 (gene) Wild cucumber (PI 183967)

NameCSPI01G12350
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 7796855 .. 7797238 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAACCAGCGGCAACCCACTACCTCTCTCCTTCTATTTCATCCGTATTTCATCCTACTCGTTCAAAATCTCAGTCTCAAACTTCTTGAAAGAGAAAGAGCTGCGATTGTTGTGCTGGGCGAACTGCCTAAAGGGCGAAGACCTCAATGTTCCGCCTTTTGATTTTGATGAAAGGTACATAGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGGTACGTAGTATTCTTTTCTCTTTGTCGATTATCTTTGATTAAATTGTTCTATCTTGTTCCCTTCCATTTGGGGGTTTTCAGTTTATATTACGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTGTTGGACACTGGAAGTGATTTGTTTTGA

mRNA sequence

ATGACAACCAGCGGCAACCCACTACCTCTCTCCTTCTATTTCATCCGTATTTCATCCTACTCGTTCAAAATCTCAGTCTCAAACTTCTTGAAAGAGAAAGAGCTGCGATTGTTGTGCTGGGCGAACTGCCTAAAGGGCGAAGACCTCAATGTTCCGCCTTTTGATTTTGATGAAAGGTACATAGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGTTTATATTACGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTGTTGGACACTGGAAGTGATTTGTTTTGA

Coding sequence (CDS)

ATGACAACCAGCGGCAACCCACTACCTCTCTCCTTCTATTTCATCCGTATTTCATCCTACTCGTTCAAAATCTCAGTCTCAAACTTCTTGAAAGAGAAAGAGCTGCGATTGTTGTGCTGGGCGAACTGCCTAAAGGGCGAAGACCTCAATGTTCCGCCTTTTGATTTTGATGAAAGGTACATAGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGTTTATATTACGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTGTTGGACACTGGAAGTGATTTGTTTTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G12350.1CSPI01G12350.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainGENE3DG3DSA:2.40.70.10coord: 69..99
score: 8.

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G12350CsaV3_1G012530Cucumber (Chinese Long) v3cpicucB001
CSPI01G12350Cucsa.126890Cucumber (Gy14) v1cgycpiB172
CSPI01G12350CsGy1G012370Cucumber (Gy14) v2cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G12350Cucurbita pepo (Zucchini)cpecpiB052
CSPI01G12350Cucurbita pepo (Zucchini)cpecpiB475
CSPI01G12350Cucurbita pepo (Zucchini)cpecpiB506
CSPI01G12350Cucurbita pepo (Zucchini)cpecpiB771
CSPI01G12350Bottle gourd (USVL1VR-Ls)cpilsiB018
CSPI01G12350Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G12350Melon (DHL92) v3.6.1cpimedB023
CSPI01G12350Melon (DHL92) v3.6.1cpimedB076
CSPI01G12350Cucumber (Gy14) v2cgybcpiB161
CSPI01G12350Cucumber (Gy14) v2cgybcpiB248
CSPI01G12350Silver-seed gourdcarcpiB0169
CSPI01G12350Silver-seed gourdcarcpiB0581
CSPI01G12350Silver-seed gourdcarcpiB0670
CSPI01G12350Silver-seed gourdcarcpiB0986
CSPI01G12350Cucumber (Chinese Long) v3cpicucB039
CSPI01G12350Cucumber (Chinese Long) v3cpicucB051
CSPI01G12350Watermelon (97103) v2cpiwmbB001
CSPI01G12350Watermelon (97103) v2cpiwmbB023
CSPI01G12350Watermelon (97103) v2cpiwmbB046
CSPI01G12350Wax gourdcpiwgoB023
CSPI01G12350Wax gourdcpiwgoB052
CSPI01G12350Wild cucumber (PI 183967)cpicpiB026
CSPI01G12350Wild cucumber (PI 183967)cpicpiB038
CSPI01G12350Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G12350Cucumber (Gy14) v1cgycpiB016
CSPI01G12350Cucumber (Gy14) v1cgycpiB162
CSPI01G12350Cucurbita maxima (Rimu)cmacpiB219
CSPI01G12350Cucurbita maxima (Rimu)cmacpiB395
CSPI01G12350Cucurbita maxima (Rimu)cmacpiB654
CSPI01G12350Cucurbita moschata (Rifu)cmocpiB000
CSPI01G12350Cucurbita moschata (Rifu)cmocpiB205
CSPI01G12350Cucurbita moschata (Rifu)cmocpiB383
CSPI01G12350Cucurbita moschata (Rifu)cmocpiB647
CSPI01G12350Cucurbita moschata (Rifu)cmocpiB846
CSPI01G12350Cucumber (Chinese Long) v2cpicuB000
CSPI01G12350Cucumber (Chinese Long) v2cpicuB044
CSPI01G12350Melon (DHL92) v3.5.1cpimeB024
CSPI01G12350Melon (DHL92) v3.5.1cpimeB086
CSPI01G12350Watermelon (Charleston Gray)cpiwcgB016
CSPI01G12350Watermelon (Charleston Gray)cpiwcgB051
CSPI01G12350Watermelon (97103) v1cpiwmB026
CSPI01G12350Watermelon (97103) v1cpiwmB043