CsGy1G011020 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCACTAACTGACAACAACCACACCACCCTCTTACACCAAATGACTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACCTTGAAGTTCACCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAACACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA ATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCACTAACTGACAACAACCACACCACCCTCTTACACCAAATGACTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACCTTGAAGTTCACCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAACACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA ATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCACTAACTGACAACAACCACACCACCCTCTTACACCAAATGACTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACCTTGAAGTTCACCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAACACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA MENPVEALEAKLKKVEDEEVHNIPLTDNNHTTLLHQMTLLLNAHQQRLLQYAPTHRMPNLELPMFDGTDTLMWILKMERYLEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPESWGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDYNLISKHLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL
BLAST of CsGy1G011020 vs. NCBI nr
Match: XP_011652863.1 (PREDICTED: uncharacterized protein LOC105435132 [Cucumis sativus]) HSP 1 Score: 684.9 bits (1766), Expect = 1.4e-193 Identity = 336/342 (98.25%), Postives = 338/342 (98.83%), Query Frame = 0
BLAST of CsGy1G011020 vs. NCBI nr
Match: XP_016900762.1 (PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo]) HSP 1 Score: 580.5 bits (1495), Expect = 3.8e-162 Identity = 286/329 (86.93%), Postives = 301/329 (91.49%), Query Frame = 0
BLAST of CsGy1G011020 vs. NCBI nr
Match: KGN64564.1 (hypothetical protein Csa_1G064860 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 5.7e-126 Identity = 224/235 (95.32%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of CsGy1G011020 vs. NCBI nr
Match: XP_024027268.1 (uncharacterized protein LOC112093319 [Morus notabilis]) HSP 1 Score: 151.4 bits (381), Expect = 5.7e-33 Identity = 98/340 (28.82%), Postives = 157/340 (46.18%), Query Frame = 0
BLAST of CsGy1G011020 vs. NCBI nr
Match: XP_022897442.1 (uncharacterized protein LOC111411108 [Olea europaea var. sylvestris]) HSP 1 Score: 149.4 bits (376), Expect = 2.2e-32 Identity = 112/434 (25.81%), Postives = 175/434 (40.32%), Query Frame = 0
BLAST of CsGy1G011020 vs. TAIR10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-14 Identity = 64/235 (27.23%), Postives = 104/235 (44.26%), Query Frame = 0
BLAST of CsGy1G011020 vs. TAIR10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding) HSP 1 Score: 62.0 bits (149), Expect = 8.2e-10 Identity = 72/263 (27.38%), Postives = 109/263 (41.44%), Query Frame = 0
BLAST of CsGy1G011020 vs. TrEMBL
Match: tr|A0A1S4DXQ7|A0A1S4DXQ7_CUCME (uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=4 SV=1) HSP 1 Score: 580.5 bits (1495), Expect = 2.5e-162 Identity = 286/329 (86.93%), Postives = 301/329 (91.49%), Query Frame = 0
BLAST of CsGy1G011020 vs. TrEMBL
Match: tr|A0A0A0LUB3|A0A0A0LUB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G064860 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 3.8e-126 Identity = 224/235 (95.32%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of CsGy1G011020 vs. TrEMBL
Match: tr|A0A2I0VWY1|A0A2I0VWY1_9ASPA (Putative mitochondrial protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006942 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28 Identity = 101/365 (27.67%), Postives = 157/365 (43.01%), Query Frame = 0
BLAST of CsGy1G011020 vs. TrEMBL
Match: tr|E5GC35|E5GC35_CUCME (Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27 Identity = 104/381 (27.30%), Postives = 156/381 (40.94%), Query Frame = 0
BLAST of CsGy1G011020 vs. TrEMBL
Match: tr|A0A1U8Q8J7|A0A1U8Q8J7_NELNU (uncharacterized protein LOC109115387 OS=Nelumbo nucifera OX=4432 GN=LOC109115387 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 5.3e-27 Identity = 98/349 (28.08%), Postives = 150/349 (42.98%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |