CSPI01G11090 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G11090
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrotransposable element Tf2
LocationChr1 : 6929892 .. 6930941 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAATTTGCTAAGAAACAAAATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCAATAACTGACAACAACCACACCACCCTCTTACACCAAATGGCTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACTTTGAAGTTCCCCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAAAACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA

mRNA sequence

ATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCAATAACTGACAACAACCACACCACCCTCTTACACCAAATGGCTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACTTTGAAGTTCCCCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAAAACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA

Coding sequence (CDS)

ATGGAAAACCCAGTAGAAGCATTAGAAGCCAAATTGAAGAAGGTTGAGGATGAAGAAGTTCACAACATCCCAATAACTGACAACAACCACACCACCCTCTTACACCAAATGGCTCTGCTCCTGAACGCACACCAACAACGCCTACTTCAATATGCACCCACCCACCGGATGCCCAACCTGGAGCTACCCATGTTCGACGGAACAGATACCCTCATGTGGATCTTGAAAATGGAGCGATACTTTGAAGTTCCCCACATCGACGACATTGCCCAGATGATGGAGACCATCCTTCTCTGTATGTCTGGCCAAGCCCTTGCCTGGTTCCGGTGCTTTCAAAACTGGGGAAATCCGCCGGAATCGTGGGGTGAGTTCCGGGGTTCATTGTATAAGAGATTTGGAGACGGTCACAGGGTGCTTTCCAGGTTCATTGGCTTGCAGCAAGAGGGGAGTGTTGGGGAATATTGTAGCAAGTTCGAGTCACTAGGGGCGCTCCTTCCAGAACTCTCTCACTGTGTTGTTGAAGCTAAATTTATGAACGGCTTGAAGACAGAGATTCGAGGGGAGGTTCGGATGTTAGATACAGAAGGTATACTGGACATTATGCATAGAGCAAGGTTAGCGGAAATTAAGAACAACGTCGCTTTGAACTCAACCAAGCGTAAGGGCACGGTCAAGGAGAGGTCTGTGGTTGTTAAGGTCGTCAGTTGGACAGACTATAACTTAATCTCTAAAAACTTAGCTACAGACTTGAAGCTTAAATTGGACATGTATGGCGACTACAGTGTGGTTTTAGGTTCCGGAAAGACGGTGAAAGGAGACGGAATTTGCCGTGGAGTGTTGCTGCAGATCGGGAATGAAACCTATGCGGAGGATTTCTTTCCCCTTCAAATGGGAGAGGATGATGAGGTGATATTGGGAAATCTGTGGCTGGTGGATTTAGGCAAGATGGAAGTTGATTGGAAAAACCTTCCGATGAAGCTGGAGGTGGGGAAGGAGATTGTTACTTTAAGAAAAGATCCATCTCTCTGA
Homology
[Close]
BLAST of CSPI01G11090 vs. TrEMBL
Match: A0A0A0LUB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064860 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 4.1e-127
Identity = 226/235 (96.17%), Postives = 231/235 (98.30%), Query Frame = 1 

Query: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60
           MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL
Sbjct: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60

Query: 61  ELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120
           ELPMFDGTDTLMWILKMERYFEV HIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES
Sbjct: 61  ELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120

Query: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180
           WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG
Sbjct: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180

Query: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVS 236
           LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVA NSTKRKGTVKE S+++ ++S
Sbjct: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKESSLIMIMLS 235

[Close]
BLAST of CSPI01G11090 vs. TrEMBL
Match: F6GVT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00660 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.2e-21
Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 1 

Query: 219 KRKGTVKERSVVVKVVSWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRG 278
           K KGT++ + V++ V S   +N +S  L   L L L     Y V++G G ++KG GICRG
Sbjct: 52  KIKGTIRSKEVIILVDSGATHNFLSLELVQQLALPLTTITSYGVMMGIGISMKGKGICRG 111

Query: 279 VLLQIGNETYAEDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRK 338
           V + +   T  EDF PL++G  D VILG  WL  LG ++V+WK L MK+++GK ++ L++
Sbjct: 112 VCISMQGLTVVEDFLPLELGNTD-VILGMPWLGTLGDVKVNWKMLTMKIKMGKAVIVLKR 171

Query: 339 DPSL 343
           DPSL
Sbjct: 172 DPSL 174

[Close]
BLAST of CSPI01G11090 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-20
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 1 

Query: 219  KRKGTVKERSVVVKVVSWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRG 278
            K KGT+  + V++ V S   +N +S  L   L L L     Y V++G+G +VKG GICRG
Sbjct: 1060 KIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRG 1119

Query: 279  VLLQIGNETYAEDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRK 338
            V + +   T  EDF PL++G  D VILG  WL  LG ++V+WK L MK+++GK ++ L+ 
Sbjct: 1120 VCISMQGLTVVEDFLPLELGNTD-VILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVLKG 1179

Query: 339  DPSL 343
            DPSL
Sbjct: 1180 DPSL 1182

[Close]
BLAST of CSPI01G11090 vs. TrEMBL
Match: V4UDR6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030074mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.4e-20
Identity = 94/305 (30.82%), Postives = 136/305 (44.59%), Query Frame = 1 

Query: 56  RMPNLELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQNWG 115
           R   LE P+FDG++   WILK ERYF V  + +  + +E  ++   G AL W++    W 
Sbjct: 82  RFRKLEKPLFDGSNPDGWILKAERYFSVNRLSN-EEKLEAAIIAFEGDALLWYQ----WE 141

Query: 116 NPPES---WGEFRGSLYKRFGDGHRVLSRFI-GLQQEGSVGEYCSKFESLGALLPELSHC 175
           N   S   W E +           + L  FI GL+ E  V     +  +LG  + +L+  
Sbjct: 142 NRKRSMMVWEEIKNIT------DEQALGNFINGLKPEIRVEVRIMEPSNLGRAM-DLAQK 201

Query: 176 VVEA---KFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNV--ALNST-------- 235
           + E    K +  L T    E    + EG  +       AEI   V  +LNS         
Sbjct: 202 IEEKLWKKELTILLTYDMDEAEQEEEEGSGEGDPELETAEINQGVEVSLNSVVGLTTLKM 261

Query: 236 -KRKGTVKERSVVVKVVSWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICR 295
            K KGT+ E+ VVV         LI  +L + +++ +   G Y V +G+G  V+G+G+CR
Sbjct: 262 MKLKGTIGEQEVVV---------LIDSDLVSKMRIPIVKIGTYGVTMGAGAVVRGEGLCR 321

Query: 296 GVLLQIGNETYAEDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLR 343
           GV + +      E+F PL +G  D  ILG                  MK  +G E VTLR
Sbjct: 322 GVTIHLQGIDIVEEFLPLGLGSSD-AILG-----------------VMKFMLGNESVTLR 347

[Close]
BLAST of CSPI01G11090 vs. TrEMBL
Match: A0A151R7E6_CAJCA (Retrotransposable element Tf2 (Fragment) OS=Cajanus cajan GN=KK1_040325 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-20
Identity = 79/288 (27.43%), Postives = 135/288 (46.88%), Query Frame = 1 

Query: 60  LELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPE 119
           LELP+F G + L W+ KMERYF +  + +  + +E  ++ + G+ALAWF+ +++    P 
Sbjct: 1   LELPLFQGDEVLGWVGKMERYFRLKGVLE-DEKVEVAMVALQGRALAWFQWWESRNQNP- 60

Query: 120 SWGEFRGSLYKRFGD--GHRVLSRFIGLQQEGSVGE---YCSKFESLGALLPELSHCVVE 179
           SW +F+GSL +RF            +GL+QEGSV E   +  +F   G +  + S     
Sbjct: 61  SWMDFKGSLLRRFQPVVAQNPFEMLLGLKQEGSVAESFHHDIRFSKYGGMTSKHSF---- 120

Query: 180 AKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVV 239
                    + RG++      G   I+         N +A +  K+ G            
Sbjct: 121 ---------KFRGKI------GDNSILVLIDCGASHNFIAESVVKKLG------------ 180

Query: 240 SWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFP 299
                            LK++    Y V +G G +V+  G+C GV L++   +  ++F+ 
Sbjct: 181 -----------------LKVEKTEPYWVKVGDGHSVRAQGMCAGVELEVQGVSVRQNFYL 237

Query: 300 LQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL 343
             + E  +VILG  WL  LG+++ ++  L +K+ VG E+  ++ D SL
Sbjct: 241 FAL-EGVDVILGMQWLRGLGEIKANFDKLTVKIRVGGEVYQIKGDSSL 237

[Close]
BLAST of CSPI01G11090 vs. TAIR10
Match: AT3G29750.1 (AT3G29750.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12
Identity = 62/236 (26.27%), Postives = 104/236 (44.07%), Query Frame = 1 

Query: 142 FIGLQQEGSVGEYCSKFESL-----------------GALLPELSHCVVEAKFMNGLKTE 201
           + G+QQEGSV +Y  +FE+L                   L P L   V E K  NG+ + 
Sbjct: 9   YSGIQQEGSVRDYRERFEALCLRSVTLPGQGFEEMFLQGLQPSLQTAVRELK-PNGINSY 68

Query: 202 IRGEVRMLD---TEGILDIMHRAR-----LAEIKNN----------VALNSTKRKGT--- 261
              +  ++     +  LD++ + +     L E++ +          + ++ T+ KG    
Sbjct: 69  QSRQAELMSLTLVQAKLDVVKKKKGVINELEELEQDSYTLRQGMEQLVIDLTRNKGMRFY 128

Query: 262 --VKERSVVVKVVSWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLL 321
             + +  VVV + S    N I   LA  LKL   +    SV+LG  + ++  G C G+ L
Sbjct: 129 GFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRL 188

Query: 322 QIGNETYAEDFFPLQMGEDD-EVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTL 337
            +      E+F  L + + D +VILG  WL  LG+  V+W+N        ++ +TL
Sbjct: 189 WVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQQWITL 243

[Close]
BLAST of CSPI01G11090 vs. TAIR10
Match: AT3G42723.1 (AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding)

HSP 1 Score: 59.7 bits (143), Expect = 4.1e-09
Identity = 75/296 (25.34%), Postives = 124/296 (41.89%), Query Frame = 1 

Query: 78  ERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPESWGEFRGSLYKRFGDGHR 137
           E YF   +I +  + ++ +   + G    W +      N P SW EF+  + +      +
Sbjct: 279 ENYFGENNIPE-QERLQIVYSNLEGDIGQWIKHLWK-KNSPTSWKEFKCMMARETKTTMK 338

Query: 138 VLSR--FIGLQQEGSVGEYCSKFESL---GALLPELSHCVVEAKFMNGLKTEIRGEVRML 197
           V  +  + G+QQEGSV EY  +FE+L     +LP      +EA F+ GL+  ++  VR L
Sbjct: 339 VNHQPHYSGIQQEGSVREYRERFEALCLGSVILPGQG---LEALFLQGLQPSLQTAVREL 398

Query: 198 DTEGILDIMHRARLAEIKNNVALN------STKRK----GTVKERSVVVKVVSWTDYNLI 257
              GI+ +M  A+  E  N++ +        T+ K       + RS+V+      D    
Sbjct: 399 KPNGIVQMMDTAQWLEESNSLMVYGSGLSVQTEPKVYPTTQAELRSMVLMGYMREDLKDT 458

Query: 258 SKNLATD---LKLKLDMYGD----------YSVVLGS--------GKTVKGDGICRGVLL 317
            +    D   LK + ++ G           Y  +L             VK    C+ + L
Sbjct: 459 PRPANEDTGTLKQEHELPGTEVATCRGMRFYGYILQQEVSFSYRLASDVKRS--CQEISL 518

Query: 318 QIGNETYAEDFFPLQMGEDDEV-ILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTL 337
           +I +    ED+    +  D    ILG  WL  LG+ EV+W+N        ++ VTL
Sbjct: 519 RINDIDIVEDYCVWDLKRDVVDVILGYEWLSKLGETEVNWQNQSFSFIHNQDWVTL 567

[Close]
BLAST of CSPI01G11090 vs. NCBI nr
Match: gi|778658524|ref|XP_011652863.1| (PREDICTED: uncharacterized protein LOC105435132 [Cucumis sativus])

HSP 1 Score: 689.1 bits (1777), Expect = 3.9e-195
Identity = 339/342 (99.12%), Postives = 339/342 (99.12%), Query Frame = 1 

Query: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60
           MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL
Sbjct: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60

Query: 61  ELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120
           ELPMFDGTDTLMWILKMERYFEV HIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES
Sbjct: 61  ELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120

Query: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180
           WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG
Sbjct: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180

Query: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVSWTDYN 240
           LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVA NSTKRKGTVKERSVVVKVVSWTDYN
Sbjct: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKERSVVVKVVSWTDYN 240

Query: 241 LISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGED 300
           LISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGED
Sbjct: 241 LISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMGED 300

Query: 301 DEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL 343
           DEVILGNLWLVDLGKMEVDWKNL MKLEVGKEIVTLRKDPSL
Sbjct: 301 DEVILGNLWLVDLGKMEVDWKNLTMKLEVGKEIVTLRKDPSL 342

[Close]
BLAST of CSPI01G11090 vs. NCBI nr
Match: gi|700209468|gb|KGN64564.1| (hypothetical protein Csa_1G064860 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 5.9e-127
Identity = 226/235 (96.17%), Postives = 231/235 (98.30%), Query Frame = 1 

Query: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60
           MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL
Sbjct: 1   MENPVEALEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNL 60

Query: 61  ELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120
           ELPMFDGTDTLMWILKMERYFEV HIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES
Sbjct: 61  ELPMFDGTDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPES 120

Query: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180
           WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG
Sbjct: 121 WGEFRGSLYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNG 180

Query: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSVVVKVVS 236
           LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVA NSTKRKGTVKE S+++ ++S
Sbjct: 181 LKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVAFNSTKRKGTVKESSLIMIMLS 235

[Close]
BLAST of CSPI01G11090 vs. NCBI nr
Match: gi|1012333702|gb|KYP45086.1| (Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan])

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 87/293 (29.69%), Postives = 152/293 (51.88%), Query Frame = 1 

Query: 54  THRMPNLELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFRCFQN 113
           T +   +ELP+F+G D   WI ++ERYF + +I+++ + ME +L+ M G+AL+W    Q 
Sbjct: 6   TEKFRKMELPIFEGEDAPGWIGRIERYFRLRNINEL-EKMEVVLVAMEGEALSWL---QW 65

Query: 114 WGNPPES--WGEFRGSLYKRFGDG--HRVLSRFIGLQQEGSVGEYCSKFESLGALLPELS 173
           W +  E+  W EF+ ++ KRF            +GL+QEGS        + L  ++ E  
Sbjct: 66  WESCTENIAWEEFKEAILKRFQPTMVENSFEILLGLKQEGSN-------KMLKIMIVEDD 125

Query: 174 HCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNVALNSTKRKGTVKERSV 233
               E    +  K EI  EV+       L +   A L   K      S    G + E  V
Sbjct: 126 EIGEEG---DREKEEIVWEVQFKS----LTLCSMAGLTSKK------SFMMWGEILENKV 185

Query: 234 VVKVVSWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYA 293
           +V V S   +N IS  L  +L+L ++    Y V +G G+ +K +G+C+G+ +++ N  + 
Sbjct: 186 LVLVDSGATHNFISTKLVENLRLSVEPTIPYYVKVGGGQRIKTNGVCKGLQMKMQNMLFK 245

Query: 294 EDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRKDPSL 343
            DF+   + + ++++LG  WL D+G+M  ++K+L ++++      TL+ DP+L
Sbjct: 246 ADFYVFAL-DGEDIVLGMEWLEDMGEMRTNFKDLTLRIKKDGIKYTLKGDPTL 273

[Close]
BLAST of CSPI01G11090 vs. NCBI nr
Match: gi|985461608|ref|XP_015388504.1| (PREDICTED: uncharacterized protein LOC107178162 [Citrus sinensis])

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-21
Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 1 

Query: 50  QYAPTHRMPNLELPMFDGTDTLMWILKMERYFEVPHIDDIAQMMETILLCMSGQALAWFR 109
           Q+    R+  L++P+F+G D   W+ + ERYF +  + +  ++M   L C+ G+ALAWF+
Sbjct: 184 QFGVDSRVRKLKMPIFEGEDAYGWVYRAERYFAINGLSEREKLMAAAL-CLEGKALAWFQ 243

Query: 110 CFQNWGNPPESWGEFRGSLYKRF-----GDGHRVLSRFIGLQQEGSVGEYCSKFESLGAL 169
            ++    P  SWGEF+  L +RF     GD H    +F  L QE +V EY  KFE L   
Sbjct: 244 -WREQRQPMRSWGEFKDRLLERFQATQEGDLHE---QFFALTQERTVMEYREKFELLSGR 303

Query: 170 LPELSHCVVEAKFMNGLKTEIRGEVRMLDTEGILDIMHRARLAEIKNNV 214
           L  L   V+E  F+ GLK EIR  +R+L   G+ + M  A++ E KN +
Sbjct: 304 LGGLLEAVLEGNFIKGLKLEIRASLRLLRPRGLGESMELAQMIEDKNTI 347

[Close]
BLAST of CSPI01G11090 vs. NCBI nr
Match: gi|147854459|emb|CAN78588.1| (hypothetical protein VITISV_043911 [Vitis vinifera])

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-20
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 1 

Query: 219  KRKGTVKERSVVVKVVSWTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRG 278
            K KGT+  + V++ V S   +N +S  L   L L L     Y V++G+G +VKG GICRG
Sbjct: 1060 KIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRG 1119

Query: 279  VLLQIGNETYAEDFFPLQMGEDDEVILGNLWLVDLGKMEVDWKNLPMKLEVGKEIVTLRK 338
            V + +   T  EDF PL++G  D VILG  WL  LG ++V+WK L MK+++GK ++ L+ 
Sbjct: 1120 VCISMQGLTVVEDFLPLELGNTD-VILGMPWLGTLGDVKVNWKMLTMKIKMGKAVMVLKG 1179

Query: 339  DPSL 343
            DPSL
Sbjct: 1180 DPSL 1182

The following BLAST results are available for this feature:
BLAST of CSPI01G11090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G11090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUB3_CUCSA4.1e-12796.17Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064860 PE=4 SV=1[more]
F6GVT4_VITVI5.2e-2143.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00660 PE=4 SV=... [more]
A5B2I6_VITVI2.0e-2044.35Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1[more]
V4UDR6_9ROSI3.4e-2030.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030074mg PE=4 SV=1[more]
A0A151R7E6_CAJCA4.4e-2027.43Retrotransposable element Tf2 (Fragment) OS=Cajanus cajan GN=KK1_040325 PE=4 SV=... [more]
BLAST of CSPI01G11090 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G29750.11.0e-1226.27 Eukaryotic aspartyl protease family protein[more]
AT3G42723.14.1e-0925.34 aminoacyl-tRNA ligases;ATP binding;nucleotide binding[more]
BLAST of CSPI01G11090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658524|ref|XP_011652863.1|3.9e-19599.12PREDICTED: uncharacterized protein LOC105435132 [Cucumis sativus][more]
gi|700209468|gb|KGN64564.1|5.9e-12796.17hypothetical protein Csa_1G064860 [Cucumis sativus][more]
gi|1012333702|gb|KYP45086.1|1.1e-2429.69Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan][more]
gi|985461608|ref|XP_015388504.1|2.0e-2137.28PREDICTED: uncharacterized protein LOC107178162 [Citrus sinensis][more]
gi|147854459|emb|CAN78588.1|2.8e-2044.35hypothetical protein VITISV_043911 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G11090.1CSPI01G11090.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 98..182
score: 1.
NoneNo IPR availablePANTHERPTHR34482FAMILY NOT NAMEDcoord: 55..220
score: 7.3
NoneNo IPR availablePANTHERPTHR34482:SF1SUBFAMILY NOT NAMEDcoord: 55..220
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G11090Csa1G064860Cucumber (Chinese Long) v2cpicuB000
CSPI01G11090MELO3C002493Melon (DHL92) v3.5.1cpimeB024
CSPI01G11090MELO3C002493.2Melon (DHL92) v3.6.1cpimedB023
CSPI01G11090CsaV3_1G011190Cucumber (Chinese Long) v3cpicucB001
CSPI01G11090Bhi08G001438Wax gourdcpiwgoB051
CSPI01G11090Cucsa.086200Cucumber (Gy14) v1cgycpiB090
CSPI01G11090CsGy1G011020Cucumber (Gy14) v2cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G11090Cucurbita maxima (Rimu)cmacpiB656
CSPI01G11090Cucurbita maxima (Rimu)cmacpiB865
CSPI01G11090Cucurbita moschata (Rifu)cmocpiB205
CSPI01G11090Cucurbita moschata (Rifu)cmocpiB383
CSPI01G11090Cucurbita moschata (Rifu)cmocpiB423
CSPI01G11090Cucurbita moschata (Rifu)cmocpiB498
CSPI01G11090Cucurbita moschata (Rifu)cmocpiB648
CSPI01G11090Cucurbita moschata (Rifu)cmocpiB845
CSPI01G11090Cucumber (Chinese Long) v2cpicuB044
CSPI01G11090Cucumber (Chinese Long) v2cpicuB050
CSPI01G11090Melon (DHL92) v3.5.1cpimeB040
CSPI01G11090Melon (DHL92) v3.5.1cpimeB086
CSPI01G11090Watermelon (Charleston Gray)cpiwcgB016
CSPI01G11090Watermelon (Charleston Gray)cpiwcgB036
CSPI01G11090Watermelon (Charleston Gray)cpiwcgB038
CSPI01G11090Watermelon (97103) v1cpiwmB010
CSPI01G11090Watermelon (97103) v1cpiwmB043
CSPI01G11090Watermelon (97103) v1cpiwmB072
CSPI01G11090Cucurbita pepo (Zucchini)cpecpiB050
CSPI01G11090Cucurbita pepo (Zucchini)cpecpiB235
CSPI01G11090Cucurbita pepo (Zucchini)cpecpiB474
CSPI01G11090Cucurbita pepo (Zucchini)cpecpiB506
CSPI01G11090Bottle gourd (USVL1VR-Ls)cpilsiB011
CSPI01G11090Bottle gourd (USVL1VR-Ls)cpilsiB018
CSPI01G11090Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G11090Melon (DHL92) v3.6.1cpimedB076
CSPI01G11090Cucumber (Gy14) v2cgybcpiB247
CSPI01G11090Cucumber (Gy14) v2cgybcpiB299
CSPI01G11090Silver-seed gourdcarcpiB0670
CSPI01G11090Silver-seed gourdcarcpiB0908
CSPI01G11090Silver-seed gourdcarcpiB0834
CSPI01G11090Silver-seed gourdcarcpiB0968
CSPI01G11090Silver-seed gourdcarcpiB1044
CSPI01G11090Cucumber (Chinese Long) v3cpicucB051
CSPI01G11090Cucumber (Chinese Long) v3cpicucB061
CSPI01G11090Watermelon (97103) v2cpiwmbB001
CSPI01G11090Watermelon (97103) v2cpiwmbB016
CSPI01G11090Watermelon (97103) v2cpiwmbB030
CSPI01G11090Watermelon (97103) v2cpiwmbB032
CSPI01G11090Watermelon (97103) v2cpiwmbB061
CSPI01G11090Wax gourdcpiwgoB023
CSPI01G11090Wild cucumber (PI 183967)cpicpiB038
CSPI01G11090Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G11090Wild cucumber (PI 183967)cpicpiB050
CSPI01G11090Cucumber (Gy14) v1cgycpiB016
CSPI01G11090Cucurbita maxima (Rimu)cmacpiB009
CSPI01G11090Cucurbita maxima (Rimu)cmacpiB219
CSPI01G11090Cucurbita maxima (Rimu)cmacpiB401
CSPI01G11090Cucurbita maxima (Rimu)cmacpiB508