CsGy1G008680 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G008680
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 5447168 .. 5447445 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGAACATTCAATCCACAGAAATGGACCCAATACATTCAAAGCAAAACAGTACGGAATTTGAAAAAGATGTTCTGACTGCGACTGTGACTTAGCAAACGTGTAATCTGTCACCGACCCAAACACTTCTCGCCACCTGTTTTCCACGCGTGTGCTCTTTTCCTTAAATCTTCGGGTTTCATTTCTCATCCCCATACCCGACCCGACCCTACTCTCTTTACTCTCACCGTCTTCTTACGTCACCCTGATGTCGCACACCTTTCCCGACTTTAA

mRNA sequence

ATGGAGAAGGAACATTCAATCCACAGAAATGGACCCAATACATTCAAAGCAAAACACAAACGTGTAATCTGTCACCGACCCAAACACTTCTCGCCACCTGTTTTCCACGCGTGTGCTCTTTTCCTTAAATCTTCGGGTTTCATTTCTCATCCCCATACCCGACCCGACCCTACTCTCTTTACTCTCACCGTCTTCTTACGTCACCCTGATGTCGCACACCTTTCCCGACTTTAA

Coding sequence (CDS)

ATGGAGAAGGAACATTCAATCCACAGAAATGGACCCAATACATTCAAAGCAAAACACAAACGTGTAATCTGTCACCGACCCAAACACTTCTCGCCACCTGTTTTCCACGCGTGTGCTCTTTTCCTTAAATCTTCGGGTTTCATTTCTCATCCCCATACCCGACCCGACCCTACTCTCTTTACTCTCACCGTCTTCTTACGTCACCCTGATGTCGCACACCTTTCCCGACTTTAA

Protein sequence

MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLFTLTVFLRHPDVAHLSRL
Homology
[Close]
BLAST of CsGy1G008680 vs. NCBI nr
Match: KGN64337.1 (hypothetical protein Csa_1G046320 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 7.7e-39
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLF 60
          MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLF
Sbjct: 1  MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLF 60

Query: 61 TLTVFLRHPDVAHLSRL 78
          TLTVFLRHPDVAHLSRL
Sbjct: 61 TLTVFLRHPDVAHLSRL 77

[Close]
BLAST of CsGy1G008680 vs. TrEMBL
Match: tr|A0A0A0LU60|A0A0A0LU60_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046320 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-39
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLF 60
          MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLF
Sbjct: 1  MEKEHSIHRNGPNTFKAKHKRVICHRPKHFSPPVFHACALFLKSSGFISHPHTRPDPTLF 60

Query: 61 TLTVFLRHPDVAHLSRL 78
          TLTVFLRHPDVAHLSRL
Sbjct: 61 TLTVFLRHPDVAHLSRL 77

The following BLAST results are available for this feature:
BLAST of CsGy1G008680 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64337.17.7e-39100.00hypothetical protein Csa_1G046320 [Cucumis sativus][more]
BLAST of CsGy1G008680 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G008680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G008680 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LU60|A0A0A0LU60_CUCSA5.1e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046320 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G008680.1CsGy1G008680.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G008680Csa1G046320Cucumber (Chinese Long) v2cgybcuB001
CsGy1G008680CsaV3_1G008770Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G008680Cucumber (Chinese Long) v3cgybcucB018
CsGy1G008680Cucumber (Chinese Long) v3cgybcucB042
CsGy1G008680Watermelon (97103) v2cgybwmbB001
CsGy1G008680Watermelon (97103) v2cgybwmbB055
CsGy1G008680Watermelon (97103) v2cgybwmbB068
CsGy1G008680Watermelon (97103) v2cgybwmbB084
CsGy1G008680Wax gourdcgybwgoB027
CsGy1G008680Wax gourdcgybwgoB065
CsGy1G008680Wax gourdcgybwgoB089
CsGy1G008680Cucumber (Gy14) v2cgybcgybB031
CsGy1G008680Cucurbita maxima (Rimu)cgybcmaB021
CsGy1G008680Cucurbita maxima (Rimu)cgybcmaB048
CsGy1G008680Cucurbita maxima (Rimu)cgybcmaB073
CsGy1G008680Cucurbita maxima (Rimu)cgybcmaB085
CsGy1G008680Cucurbita maxima (Rimu)cgybcmaB102
CsGy1G008680Cucurbita moschata (Rifu)cgybcmoB042
CsGy1G008680Cucurbita moschata (Rifu)cgybcmoB067
CsGy1G008680Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G008680Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G008680Cucurbita pepo (Zucchini)cgybcpeB069
CsGy1G008680Cucumber (Chinese Long) v2cgybcuB011
CsGy1G008680Cucumber (Chinese Long) v2cgybcuB038
CsGy1G008680Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G008680Bottle gourd (USVL1VR-Ls)cgyblsiB047
CsGy1G008680Bottle gourd (USVL1VR-Ls)cgyblsiB062
CsGy1G008680Melon (DHL92) v3.5.1cgybmeB003
CsGy1G008680Melon (DHL92) v3.5.1cgybmeB022
CsGy1G008680Melon (DHL92) v3.6.1cgybmedB003
CsGy1G008680Melon (DHL92) v3.6.1cgybmedB020
CsGy1G008680Melon (DHL92) v3.6.1cgybmedB037
CsGy1G008680Watermelon (Charleston Gray)cgybwcgB012
CsGy1G008680Watermelon (Charleston Gray)cgybwcgB056
CsGy1G008680Watermelon (Charleston Gray)cgybwcgB068
CsGy1G008680Watermelon (Charleston Gray)cgybwcgB088
CsGy1G008680Watermelon (97103) v1cgybwmB035
CsGy1G008680Watermelon (97103) v1cgybwmB053
CsGy1G008680Wild cucumber (PI 183967)cgybcpiB001
CsGy1G008680Wild cucumber (PI 183967)cgybcpiB010
CsGy1G008680Wild cucumber (PI 183967)cgybcpiB036
CsGy1G008680Silver-seed gourdcarcgybB0500
CsGy1G008680Silver-seed gourdcarcgybB0620
CsGy1G008680Silver-seed gourdcarcgybB0991