CsGy1G003370 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G003370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationChr1 : 2110670 .. 2112388 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAGAAAATGGAGAGTGAGACATAACACATTATCGGCCCGTATCATCGGCCCAGCCCAGTATCTAAACTGTCTCTTAGGTTTTTCCCTCTTGCTTCCTTCTTCTTCTGAGCTCAGTTCCATTTTTATTTTTCAGAGCTCTCAACCATGCCGCCATTACCGTATCTGCAACTTCGAACCTTAGTTCTTCGATCTCTATCATCGTCTTCTACTAATTCCTTGAAAGATTCTGCTAGGACGGTTCTTTTACATCGAAATTTGACGTCTCTCTTCCACCATTTCCGACATCATGGGGCGGCGTTAAGGTTTTCTTCTCCCTTGTATCTCTCACTTTCTCATTCGTTCTCTTCCGAGTCCGTCAACAATGACGTGGATCAAACATCCCAGTCACTTGCATCTGAGCTTCTCAAAGACCCTGATTCGGATCCTCTTCCCATTACACAGCGTCTTCAACTTAGCTTTTCGCATGTTAAACCGAATCCGGAGTTGGTTCGTAATACACTCAATCTCTCATCGGAAGCTGGCCGTACAGTGTTAGGGTTTAATGAATGGTTAGTATCGAATCCTGATTTTCATCACACTGATGAAACTATATCGTATTTTGTTGATTTCTTTGGTCGTAGAAAAGATTTCAATGCGGTTCAGGAAGTCCTTGCGAAAGGTTTAGGGATCAATGGGCCTAAAACCCTGAAGTCGTCTATTCATCGGTTCGCTCGTGCTGGGCGACCCACTAAGTTGATCTCATTTTTTGAGACGATGGAGACGAATTACGGGCTTAAGAGGGATAAAGAGTCGCTTAGGATGGTAGTGGAGAAGCTTTGTGAAAATGGGTTCGGGAGCCATGCTGAAAAGATGGTCAAAGACTTGGCTAATGAATTTTTCCCTGATGAAGCAATATGCGATACTCTGATCAAAGGATGGTGTGTGAATGAGAAACTTGATGAAGCTAAAAGGCTAGCGGGTGAGATGTACAGGGGCGGGTTCGAGTTAGGGACAACCGCATATAATGCTTTGCTTGATTGTGTTTGCAAACTTTGTAGGAAAAAGGATCCGTTTAGACTTGATTCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTGTCGTGGGGTTCCACGAAATGTCGAAACTTTCAATGTGCTGATCAATAATTTGTGCAAGATTAGGAGAACTACTGATGCAGTTAATTTGTTTCATCGAATGGGGGAATGGGGATGTCATCCCAATGCTGAAACGTTCCTCATATTGATTAGAAGTTTGTATCAAGCGGCACGAACGGGGGAGGGGGATGAAATGATTGACAGGATGAAGTCTGTCGGATATGGAGATGCACTTGATAAGAAGGCTTATTATGAGTTTATGAATATTTTGTGTGGGATTGAGAGAATTGATCATGCACTGGTTGTATTTGCAAAGATGAAGAAGGATGGGTGTGAACCTGGGATTAAAACATATGATCTATTGATGGGAAAACTTTGTGCCCACAATCGTTTGGACAAAGCGAATTCACTCTTTAACGAAGCTCAAAAACGGGGTGTACCAGTTACTCCAAAAGCATATCAGGTGGATCCGAAATATGTAAAGAAGCCAAAGGATAAGAAGGTTGCAAAGAAGAGGGAGACATTGCCAGAGAAAATGGCGAGAAAGAGGCGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAACCGAGAAGAGGAATGCGTAGAGCATTTTGA

mRNA sequence

ATGAAAAAGAAAATGGAGAAGCTCTCAACCATGCCGCCATTACCGTATCTGCAACTTCGAACCTTAGTTCTTCGATCTCTATCATCGTCTTCTACTAATTCCTTGAAAGATTCTGCTAGGACGGTTCTTTTACATCGAAATTTGACGTCTCTCTTCCACCATTTCCGACATCATGGGGCGGCGTTAAGGTTTTCTTCTCCCTTGTATCTCTCACTTTCTCATTCGTTCTCTTCCGAGTCCGTCAACAATGACGTGGATCAAACATCCCAGTCACTTGCATCTGAGCTTCTCAAAGACCCTGATTCGGATCCTCTTCCCATTACACAGCGTCTTCAACTTAGCTTTTCGCATGTTAAACCGAATCCGGAGTTGGTTCGTAATACACTCAATCTCTCATCGGAAGCTGGCCGTACAGTGTTAGGGTTTAATGAATGGTTAGTATCGAATCCTGATTTTCATCACACTGATGAAACTATATCGTATTTTGTTGATTTCTTTGGTCGTAGAAAAGATTTCAATGCGGTTCAGGAAGTCCTTGCGAAAGGTTTAGGGATCAATGGGCCTAAAACCCTGAAGTCGTCTATTCATCGGTTCGCTCGTGCTGGGCGACCCACTAAGTTGATCTCATTTTTTGAGACGATGGAGACGAATTACGGGCTTAAGAGGGATAAAGAGTCGCTTAGGATGGTAGTGGAGAAGCTTTGTGAAAATGGGTTCGGGAGCCATGCTGAAAAGATGGTCAAAGACTTGGCTAATGAATTTTTCCCTGATGAAGCAATATGCGATACTCTGATCAAAGGATGGTGTGTGAATGAGAAACTTGATGAAGCTAAAAGGCTAGCGGGTGAGATGTACAGGGGCGGGTTCGAGTTAGGGACAACCGCATATAATGCTTTGCTTGATTGTGTTTGCAAACTTTGTAGGAAAAAGGATCCGTTTAGACTTGATTCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTGTCGTGGGGTTCCACGAAATGTCGAAACTTTCAATGTGCTGATCAATAATTTGTGCAAGATTAGGAGAACTACTGATGCAGTTAATTTGTTTCATCGAATGGGGGAATGGGGATGTCATCCCAATGCTGAAACGTTCCTCATATTGATTAGAAGTTTGTATCAAGCGGCACGAACGGGGGAGGGGGATGAAATGATTGACAGGATGAAGTCTGTCGGATATGGAGATGCACTTGATAAGAAGGCTTATTATGAGTTTATGAATATTTTGTGTGGGATTGAGAGAATTGATCATGCACTGGTTGTATTTGCAAAGATGAAGAAGGATGGGTGTGAACCTGGGATTAAAACATATGATCTATTGATGGGAAAACTTTGTGCCCACAATCGTTTGGACAAAGCGAATTCACTCTTTAACGAAGCTCAAAAACGGGGTGTACCAGTTACTCCAAAAGCATATCAGGTGGATCCGAAATATGTAAAGAAGCCAAAGGATAAGAAGGTTGCAAAGAAGAGGGAGACATTGCCAGAGAAAATGGCGAGAAAGAGGCGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAACCGAGAAGAGGAATGCGTAGAGCATTTTGA

Coding sequence (CDS)

ATGAAAAAGAAAATGGAGAAGCTCTCAACCATGCCGCCATTACCGTATCTGCAACTTCGAACCTTAGTTCTTCGATCTCTATCATCGTCTTCTACTAATTCCTTGAAAGATTCTGCTAGGACGGTTCTTTTACATCGAAATTTGACGTCTCTCTTCCACCATTTCCGACATCATGGGGCGGCGTTAAGGTTTTCTTCTCCCTTGTATCTCTCACTTTCTCATTCGTTCTCTTCCGAGTCCGTCAACAATGACGTGGATCAAACATCCCAGTCACTTGCATCTGAGCTTCTCAAAGACCCTGATTCGGATCCTCTTCCCATTACACAGCGTCTTCAACTTAGCTTTTCGCATGTTAAACCGAATCCGGAGTTGGTTCGTAATACACTCAATCTCTCATCGGAAGCTGGCCGTACAGTGTTAGGGTTTAATGAATGGTTAGTATCGAATCCTGATTTTCATCACACTGATGAAACTATATCGTATTTTGTTGATTTCTTTGGTCGTAGAAAAGATTTCAATGCGGTTCAGGAAGTCCTTGCGAAAGGTTTAGGGATCAATGGGCCTAAAACCCTGAAGTCGTCTATTCATCGGTTCGCTCGTGCTGGGCGACCCACTAAGTTGATCTCATTTTTTGAGACGATGGAGACGAATTACGGGCTTAAGAGGGATAAAGAGTCGCTTAGGATGGTAGTGGAGAAGCTTTGTGAAAATGGGTTCGGGAGCCATGCTGAAAAGATGGTCAAAGACTTGGCTAATGAATTTTTCCCTGATGAAGCAATATGCGATACTCTGATCAAAGGATGGTGTGTGAATGAGAAACTTGATGAAGCTAAAAGGCTAGCGGGTGAGATGTACAGGGGCGGGTTCGAGTTAGGGACAACCGCATATAATGCTTTGCTTGATTGTGTTTGCAAACTTTGTAGGAAAAAGGATCCGTTTAGACTTGATTCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTGTCGTGGGGTTCCACGAAATGTCGAAACTTTCAATGTGCTGATCAATAATTTGTGCAAGATTAGGAGAACTACTGATGCAGTTAATTTGTTTCATCGAATGGGGGAATGGGGATGTCATCCCAATGCTGAAACGTTCCTCATATTGATTAGAAGTTTGTATCAAGCGGCACGAACGGGGGAGGGGGATGAAATGATTGACAGGATGAAGTCTGTCGGATATGGAGATGCACTTGATAAGAAGGCTTATTATGAGTTTATGAATATTTTGTGTGGGATTGAGAGAATTGATCATGCACTGGTTGTATTTGCAAAGATGAAGAAGGATGGGTGTGAACCTGGGATTAAAACATATGATCTATTGATGGGAAAACTTTGTGCCCACAATCGTTTGGACAAAGCGAATTCACTCTTTAACGAAGCTCAAAAACGGGGTGTACCAGTTACTCCAAAAGCATATCAGGTGGATCCGAAATATGTAAAGAAGCCAAAGGATAAGAAGGTTGCAAAGAAGAGGGAGACATTGCCAGAGAAAATGGCGAGAAAGAGGCGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAACCGAGAAGAGGAATGCGTAGAGCATTTTGA

Protein sequence

MKKKMEKLSTMPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF
Homology
[Close]
BLAST of CsGy1G003370 vs. NCBI nr
Match: XP_004138218.1 (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis sativus])

HSP 1 Score: 887.1 bits (2291), Expect = 2.9e-254
Identity = 521/522 (99.81%), Postives = 521/522 (99.81%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 70
           MPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL
Sbjct: 1   MPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 71  SLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 130
           SLSHSFSSESVNN VDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN
Sbjct: 61  SLSHSFSSESVNNHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 131 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKT 190
           LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKT 180

Query: 191 LKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDL 250
           LKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDL
Sbjct: 181 LKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDL 240

Query: 251 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 310
           ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 311 DPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXX 370
           DPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 DPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXX 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVF 430
           XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVF
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVF 420

Query: 431 AKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVKKP 490
           AKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVKKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVKKP 480

Query: 491 KDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           KDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF
Sbjct: 481 KDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 522

[Close]
BLAST of CsGy1G003370 vs. NCBI nr
Match: XP_008453300.1 (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis melo])

HSP 1 Score: 857.4 bits (2214), Expect = 2.5e-245
Identity = 491/522 (94.06%), Postives = 498/522 (95.40%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 70
           MPPLPYLQLR+L LRSLSSSSTNSL DSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 71  SLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 130
           SLSHSFSSES NNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN
Sbjct: 61  SLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 131 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKT 190
           LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVD+FGRRKDFNAV EVLAKGLGINGPKT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGINGPKT 180

Query: 191 LKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDL 250
           L+SSIHRFARAGRPTKLISFFETME NYGLKRDK+SLRMVVEKL ENGFGSHAEKMVKDL
Sbjct: 181 LESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEKMVKDL 240

Query: 251 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 310
           ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 311 DPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXX 370
           DPFRL SEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXX XXXXXXXXXXX
Sbjct: 301 DPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXHXXXXXXXXXXX 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVF 430
           XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFM ILCGIERIDHALVVF
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMKILCGIERIDHALVVF 420

Query: 431 AKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVKKP 490
           AKMKKDGCEPGIKTYDLLMGK              NEAQKRGVPVTPKAYQVDPKY+KKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYMKKP 480

Query: 491 KDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           K KKVAKKRETLPEKMARKRRRLKQIRLSFVKKP++GMRRAF
Sbjct: 481 KVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]
BLAST of CsGy1G003370 vs. NCBI nr
Match: XP_022966044.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima] >XP_022966052.1 pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 742.7 bits (1916), Expect = 9.0e-211
Identity = 420/529 (79.40%), Postives = 447/529 (84.50%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSSS-------TNSLKDSARTVLLHRNLTSLFHHFRHHGAALR 70
           MPPLPYL LR   +RSLSSSS                 V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSXXXXXXXXXXXXXXXXXVVLRRDLTSVFHHFRRRGPALG 60

Query: 71  FSSPLYLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 130
            S    LSLSHSF SES  NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 131 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGL 190
           L+ NTLN SSEAGRTVLGFNEWL+SNPDFHHTDETISYFVD+FGRRKDFN++ EVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 191 GINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHA 250
           GI+G KTL+S+I RFARAGRPTKL+SFFETME NYG KRDKES+RMVVEKLCENG+ SHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 251 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 310
           EKMVKDLA+EFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 311 CKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXX 370
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+             
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERI 430
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S GY DALDKKAYYEF+ ILCGIERI
Sbjct: 361 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 431 DHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVD 490
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK              NEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 491 PKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           P+Y KKPK KKV KKRETLPEKMARKRRRLKQIRLSFVKKP++ MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]
BLAST of CsGy1G003370 vs. NCBI nr
Match: XP_022933386.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 740.7 bits (1911), Expect = 3.4e-210
Identity = 420/529 (79.40%), Postives = 447/529 (84.50%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSSS-------TNSLKDSARTVLLHRNLTSLFHHFRHHGAALR 70
           MPPLPYL LR   +RSLSSSS                +V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSXXXXXXXXXXXXXXXXSVVLRRDLTSVFHHFRRQGPALG 60

Query: 71  FSSPLYLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 130
            S    LSLSHSF SES  NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 131 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGL 190
           LV NTLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVD+FGRRKDFN++ EVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 191 GINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHA 250
           GI+G KTL+S+I RFARAGRPTKL+SFFETME NYG KRDKES+RMVVEKLCENG+ SHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 251 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 310
           EKMVKDLA+EFFPDEAICD LIKGWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 311 CKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXX 370
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+             
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERI 430
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S GY DALDKKAYYEF+ ILCGIERI
Sbjct: 361 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 431 DHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVD 490
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK              NEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 491 PKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           P+Y KKPK KKV KKRETLPEKMARKRRRLKQIRLSFVKKP+R MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]
BLAST of CsGy1G003370 vs. NCBI nr
Match: XP_023531133.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 739.2 bits (1907), Expect = 9.9e-210
Identity = 418/529 (79.02%), Postives = 448/529 (84.69%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSSS-------TNSLKDSARTVLLHRNLTSLFHHFRHHGAALR 70
           MPPLPYL LR   +RSLSSSS                +V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSXXXXXXXXXXXXXXXXSVVLRRDLTSVFHHFRRQGPALG 60

Query: 71  FSSPLYLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 130
            S    LSLSHSF SES  NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQLSFSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 131 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGL 190
           LV NTLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVD+FGRRKDFN++ EVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 191 GINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHA 250
           GI+G KTL+S+I RFARAGRPTKL+SFFETME NYG KRDKES+R+VVEKLCENG+ SHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240

Query: 251 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 310
           EKMVKDLA+EFFPDEAICD LI+GWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 311 CKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXX 370
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+             
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERI 430
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S GY DALDKKAYYEF+ ILCGIERI
Sbjct: 361 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 431 DHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVD 490
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK              NEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 491 PKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           P+Y KKPK KKV KKRETLPEKMARKRRRLKQIRLSFVKKP++ MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]
BLAST of CsGy1G003370 vs. TAIR10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 472.6 bits (1215), Expect = 3.1e-133
Identity = 267/525 (50.86%), Postives = 334/525 (63.62%), Query Frame = 0 

Query: 11  MPP-LPYLQLRTLVLRS-LSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL 70
           MPP LP LQLR L+LRS +SSSS N+L+   R +    +   LF       +++ FS+  
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRII----SSKPLFSPLPPSRSSI-FSTFP 60

Query: 71  YLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNT 130
               S   ++ES + D ++ + S + EL  +PD++   I+QR  LSFSH+ PNP+L+  T
Sbjct: 61  SRFFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQT 120

Query: 131 LNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGP 190
           LNLS EAGR  LGFNEWL SN +F HTDET+S+FVD+FGRRKDF  + E+++K  GI G 
Sbjct: 121 LNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGG 180

Query: 191 KTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVK 250
           KTL+S+I R  RAGRP ++  FFE ME +YGLKRDKESL +VV+KLCE G  S AEKMVK
Sbjct: 181 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK 240

Query: 251 DLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCR 310
           + ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LDCVCKLCR
Sbjct: 241 NTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 300

Query: 311 KKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXX 370
           KKDPF+L  E E++L+EM+ RGVPR                R                  
Sbjct: 301 KKDPFKLQPEVEKVLLEMEFRGVPRXXXXXXXXXXXXXXXXRTEEAMTLFGRMGEWGCQP 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALV 430
                                        S GYG+ L+KK YY F+ ILCGIER++HA+ 
Sbjct: 361 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 420

Query: 431 VFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVK 490
           VF  MK +GC+PGIKTYDLLMGK               EA K+G+ V+PK Y+VDP+++K
Sbjct: 421 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK 480

Query: 491 KPKDKKV---AKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRR 531
           K K K+V    KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 K-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]
BLAST of CsGy1G003370 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 5.5e-13
Identity = 49/184 (26.63%), Postives = 81/184 (44.02%), Query Frame = 0 

Query: 111 LQLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRK 170
           L L+ S V+  P L+   LN   +AG     F  W    P + H+ E     V    + +
Sbjct: 102 LALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 161

Query: 171 DFNAV----QEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKES 230
            F AV    +E+  +   +  P+     + RFA A    K I   + M   +G + D+  
Sbjct: 162 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM-PKFGFEPDEYV 221

Query: 231 LRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYR 290
              +++ LC++G    A K+ +D+   F  +     +L+ GWC   K+ EAK +  +M  
Sbjct: 222 FGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 281

[Close]
BLAST of CsGy1G003370 vs. TAIR10
Match: AT1G26500.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 8.0e-12
Identity = 72/304 (23.68%), Postives = 118/304 (38.82%), Query Frame = 0 

Query: 149 NPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGING---PKTLKSSIHRFARAGRPT 208
           +PDF HT  T +  +   G  ++ +   E LA+ +G  G    KT +  +   A A    
Sbjct: 105 HPDFTHTSTTSNKMLAIIGNSRNMDLFWE-LAQEIGKRGLVNDKTFRIVLKTLASARELK 164

Query: 209 KLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLI 268
           K +++F  M   +G   + E++   VE LC+      A+ +   L     PDE    T+I
Sbjct: 165 KCVNYFHLM-NGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMI 224

Query: 269 KGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVE 328
           +G+C    L EA +L   M   GF++   A   +++ +     KK+ F  D  ++   V 
Sbjct: 225 QGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLL----KKNQF--DEASKVFYVM 284

Query: 329 MDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           +  RG   +   + V+I+ LCK  R                                   
Sbjct: 285 VSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRR 344

Query: 389 XXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTY 448
                       +       D   Y+  +  L  I+R   A  VF KM + GCEP + TY
Sbjct: 345 VVEAYGLVEGVENP------DISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 394

Query: 449 DLLM 450
            +L+
Sbjct: 405 LMLL 394

[Close]
BLAST of CsGy1G003370 vs. TAIR10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 41/201 (20.40%), Postives = 84/201 (41.79%), Query Frame = 0 

Query: 118 VKPNPELVRNTLN--LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAV 177
           V P+  LV   +    +  + R +L F  W   +      D+  +Y +     +KD  A+
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 178 QEVLA---KGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVE 237
           Q +L+   K       +T         + G+    I  F+ ++  +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD-KFSCPQDGFTVTAIIS 182

Query: 238 KLCENGFGSHAEKMVKDLANEFFPDE-AICDTLIKGWCVNEKLDEAKRLAGEMYRGGFEL 297
            LC  G    A  ++    +    +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 298 GTTAYNALLDCVCKLCRKKDP 313
               +N+LL C+C+    ++P
Sbjct: 243 DLFCFNSLLTCLCERNVNRNP 262

[Close]
BLAST of CsGy1G003370 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 45.8 bits (107), Expect = 9.5e-05
Identity = 30/99 (30.30%), Postives = 49/99 (49.49%), Query Frame = 0 

Query: 243 AEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDC 302
           AE++++ L  E  P+  I  T+I GWC N  +D+A R+  +M + G       +  L+  
Sbjct: 409 AEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 468

Query: 303 VCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVL 342
             ++   K P++    AEE+L  M   GV     TF +L
Sbjct: 469 YLEV---KQPWK----AEEVLQMMRGCGVKPENSTFLLL 500

[Close]
BLAST of CsGy1G003370 vs. Swiss-Prot
Match: sp|Q9FME4|PP438_ARATH (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 5.7e-132
Identity = 267/525 (50.86%), Postives = 334/525 (63.62%), Query Frame = 0 

Query: 11  MPP-LPYLQLRTLVLRS-LSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL 70
           MPP LP LQLR L+LRS +SSSS N+L+   R +    +   LF       +++ FS+  
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRII----SSKPLFSPLPPSRSSI-FSTFP 60

Query: 71  YLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNT 130
               S   ++ES + D ++ + S + EL  +PD++   I+QR  LSFSH+ PNP+L+  T
Sbjct: 61  SRFFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQT 120

Query: 131 LNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGP 190
           LNLS EAGR  LGFNEWL SN +F HTDET+S+FVD+FGRRKDF  + E+++K  GI G 
Sbjct: 121 LNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGG 180

Query: 191 KTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVK 250
           KTL+S+I R  RAGRP ++  FFE ME +YGLKRDKESL +VV+KLCE G  S AEKMVK
Sbjct: 181 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK 240

Query: 251 DLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCR 310
           + ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LDCVCKLCR
Sbjct: 241 NTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 300

Query: 311 KKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXX 370
           KKDPF+L  E E++L+EM+ RGVPR                R                  
Sbjct: 301 KKDPFKLQPEVEKVLLEMEFRGVPRXXXXXXXXXXXXXXXXRTEEAMTLFGRMGEWGCQP 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALV 430
                                        S GYG+ L+KK YY F+ ILCGIER++HA+ 
Sbjct: 361 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 420

Query: 431 VFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVK 490
           VF  MK +GC+PGIKTYDLLMGK               EA K+G+ V+PK Y+VDP+++K
Sbjct: 421 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK 480

Query: 491 KPKDKKV---AKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRR 531
           K K K+V    KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 K-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]
BLAST of CsGy1G003370 vs. Swiss-Prot
Match: sp|Q0WP85|PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-13
Identity = 53/220 (24.09%), Postives = 94/220 (42.73%), Query Frame = 0 

Query: 99  DPDSDPLPITQRL------------QLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWL 158
           +P SD   I+Q L             L  + +   P L+  TL       +  L F ++L
Sbjct: 36  EPSSDAELISQMLITNHNPFHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYL 95

Query: 159 VSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKTLKSSIHRFARAGRPTK 218
            S P    T  + +  +D  GR + F+ V++++ + +    P+T    + R   AG   +
Sbjct: 96  RSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVE-MDQTSPETFLILVKRLIAAGLTRQ 155

Query: 219 LISFFETMETNYGLKRDK-ESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLI 278
            +  F+        +R +      +++ LC+ G+   A  +  +   EF  DE +   LI
Sbjct: 156 AVRAFDDAPCFLENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILI 215

Query: 279 KGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCK 306
            GWC   ++D A++   EM   G E     YN LL+ +C+
Sbjct: 216 AGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICR 254

[Close]
BLAST of CsGy1G003370 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-11
Identity = 49/184 (26.63%), Postives = 81/184 (44.02%), Query Frame = 0 

Query: 111 LQLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRK 170
           L L+ S V+  P L+   LN   +AG     F  W    P + H+ E     V    + +
Sbjct: 102 LALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 161

Query: 171 DFNAV----QEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKES 230
            F AV    +E+  +   +  P+     + RFA A    K I   + M   +G + D+  
Sbjct: 162 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM-PKFGFEPDEYV 221

Query: 231 LRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYR 290
              +++ LC++G    A K+ +D+   F  +     +L+ GWC   K+ EAK +  +M  
Sbjct: 222 FGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 281

[Close]
BLAST of CsGy1G003370 vs. Swiss-Prot
Match: sp|Q9FZD4|PPR59_ARATH (Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana OX=3702 GN=At1g26500 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-10
Identity = 72/304 (23.68%), Postives = 118/304 (38.82%), Query Frame = 0 

Query: 149 NPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGING---PKTLKSSIHRFARAGRPT 208
           +PDF HT  T +  +   G  ++ +   E LA+ +G  G    KT +  +   A A    
Sbjct: 105 HPDFTHTSTTSNKMLAIIGNSRNMDLFWE-LAQEIGKRGLVNDKTFRIVLKTLASARELK 164

Query: 209 KLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLI 268
           K +++F  M   +G   + E++   VE LC+      A+ +   L     PDE    T+I
Sbjct: 165 KCVNYFHLM-NGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMI 224

Query: 269 KGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVE 328
           +G+C    L EA +L   M   GF++   A   +++ +     KK+ F  D  ++   V 
Sbjct: 225 QGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLL----KKNQF--DEASKVFYVM 284

Query: 329 MDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           +  RG   +   + V+I+ LCK  R                                   
Sbjct: 285 VSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRR 344

Query: 389 XXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTY 448
                       +       D   Y+  +  L  I+R   A  VF KM + GCEP + TY
Sbjct: 345 VVEAYGLVEGVENP------DISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 394

Query: 449 DLLM 450
            +L+
Sbjct: 405 LMLL 394

[Close]
BLAST of CsGy1G003370 vs. Swiss-Prot
Match: sp|Q9FLJ6|PP439_ARATH (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-06
Identity = 41/201 (20.40%), Postives = 84/201 (41.79%), Query Frame = 0 

Query: 118 VKPNPELVRNTLN--LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAV 177
           V P+  LV   +    +  + R +L F  W   +      D+  +Y +     +KD  A+
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 178 QEVLA---KGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVE 237
           Q +L+   K       +T         + G+    I  F+ ++  +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD-KFSCPQDGFTVTAIIS 182

Query: 238 KLCENGFGSHAEKMVKDLANEFFPDE-AICDTLIKGWCVNEKLDEAKRLAGEMYRGGFEL 297
            LC  G    A  ++    +    +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 298 GTTAYNALLDCVCKLCRKKDP 313
               +N+LL C+C+    ++P
Sbjct: 243 DLFCFNSLLTCLCERNVNRNP 262

[Close]
BLAST of CsGy1G003370 vs. TrEMBL
Match: tr|A0A1S3BVC3|A0A1S3BVC3_CUCME (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494058 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 1.7e-245
Identity = 491/522 (94.06%), Postives = 498/522 (95.40%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 70
           MPPLPYLQLR+L LRSLSSSSTNSL DSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 71  SLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 130
           SLSHSFSSES NNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN
Sbjct: 61  SLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 131 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKT 190
           LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVD+FGRRKDFNAV EVLAKGLGINGPKT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGINGPKT 180

Query: 191 LKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDL 250
           L+SSIHRFARAGRPTKLISFFETME NYGLKRDK+SLRMVVEKL ENGFGSHAEKMVKDL
Sbjct: 181 LESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEKMVKDL 240

Query: 251 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 310
           ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 311 DPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXXXXXXXXXX 370
           DPFRL SEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXX XXXXXXXXXXX
Sbjct: 301 DPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXHXXXXXXXXXXX 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIERIDHALVVF 430
           XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFM ILCGIERIDHALVVF
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMKILCGIERIDHALVVF 420

Query: 431 AKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQVDPKYVKKP 490
           AKMKKDGCEPGIKTYDLLMGK              NEAQKRGVPVTPKAYQVDPKY+KKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYMKKP 480

Query: 491 KDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           K KKVAKKRETLPEKMARKRRRLKQIRLSFVKKP++GMRRAF
Sbjct: 481 KVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]
BLAST of CsGy1G003370 vs. TrEMBL
Match: tr|A0A251PBE0|A0A251PBE0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G207600 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.2e-165
Identity = 320/531 (60.26%), Postives = 375/531 (70.62%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLR--SLSSSSTNSLKDSARTVLLHRNLTSLFHHFR---HHGAALRFS 70
           M PL  LQLR L+LR  S SSSS +S       +L H    + FH+ +      A+  F 
Sbjct: 1   MRPLQPLQLRRLLLRYLSTSSSSPSSSPTIQTHILFHSRKPTHFHYAQPAITTTASSHFL 60

Query: 71  SPLYLSLSHSFSSESV---NNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNP 130
           S L+ S+S  FSS ++   ++D  Q +QSL+SELL DP SDPL +TQRLQLSFSH+ P P
Sbjct: 61  SLLHFSVSKPFSSSTLPAQDSDQSQLAQSLSSELLIDPSSDPLSVTQRLQLSFSHITPTP 120

Query: 131 ELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKG 190
            LV++ LNLS +AGR V+GFNEWL+SNP F HTDET+SYFVD+FGRRKDF A  +V+   
Sbjct: 121 SLVQSVLNLSPDAGRAVIGFNEWLISNPTFEHTDETLSYFVDYFGRRKDFKATHDVIVSA 180

Query: 191 LGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSH 250
            G+ GPKT  SSI R  RAGRP + +SFFE ME +YGLKRDK SLR+VVEKLCENGF S+
Sbjct: 181 GGVAGPKTFASSIDRLVRAGRPAQAVSFFERMEKDYGLKRDKTSLRLVVEKLCENGFASN 240

Query: 251 AEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDC 310
           AEKMVK LANEFFPDE ICD LIKGWC++ KL+EA+RLAGEMYRGGFE+GTTAYNA+LDC
Sbjct: 241 AEKMVKSLANEFFPDEYICDLLIKGWCIDGKLEEARRLAGEMYRGGFEIGTTAYNAILDC 300

Query: 311 VCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXXXXXXX 370
           V KLCRKKDPFRL SEAE+ILV+MD  GVPRNVETFNVLI+NLCK+R+            
Sbjct: 301 VSKLCRKKDPFRLHSEAEQILVDMDTHGVPRNVETFNVLISNLCKLRKTEDALNLFHRMG 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNILCGIER 430
                                              S G+G ALDKKAYY FM ILCGIER
Sbjct: 361 EWGCYPNETTFLVLIRSLYQGARIGEGDEMIDRMKSAGFGGALDKKAYYGFMKILCGIER 420

Query: 431 IDHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTPKAYQV 490
           IDHA+ VF KMK+DGCEPGIK+YDLLMGK              NEAQKRGVP+T KAYQ 
Sbjct: 421 IDHAMRVFKKMKEDGCEPGIKSYDLLMGKLYAHNRADRATALFNEAQKRGVPLTQKAYQA 480

Query: 491 DPKYV-KKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           DP+++ KKPK  K  KKRET PEKMARK+RRLKQIRLSFVKKP++ MRRA+
Sbjct: 481 DPRFLKKKPKAAKKEKKRETFPEKMARKKRRLKQIRLSFVKKPKKMMRRAY 531

[Close]
BLAST of CsGy1G003370 vs. TrEMBL
Match: tr|A0A2P5EBW7|A0A2P5EBW7_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_212220 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 361/537 (67.23%), Postives = 416/537 (77.47%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSS----STNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSS 70
           MPPL  LQLR L+LR+LSSS    S++S       V           HFRH  A    +S
Sbjct: 1   MPPLQSLQLRRLILRNLSSSSSRISSSSFIQKPHLVTSSEPTPLTSSHFRHCQATSSSAS 60

Query: 71  ----------PLYLSLSHSFSSESVNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFS 130
                     PL  + S S SSE+  +D DQ ++SL+SEL+KDP+S+PLPI  RL L+FS
Sbjct: 61  RSHFLSLPQTPLSRTFSSS-SSETPVDDHDQIARSLSSELVKDPESEPLPIGSRLNLNFS 120

Query: 131 HVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQ 190
           HV P   +V   LNLS EAGRTVLGFN+WL+SNP F H+DET+S+FVD+ GRRKDF AV 
Sbjct: 121 HVVPTAPVVLAALNLSPEAGRTVLGFNDWLISNPKFEHSDETLSFFVDYLGRRKDFKAVH 180

Query: 191 EVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCE 250
           +V+       GPKTL S++ R  RAGR T+ ++FFE ME +YGLKRDKESLR+VVE+LCE
Sbjct: 181 DVIVGSRAAAGPKTLASAVDRLVRAGRATQAVAFFERMERDYGLKRDKESLRLVVEELCE 240

Query: 251 NGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAY 310
           NG+ ++AEKMVK LANEFFPDE ICD+LIKGWCV+ KL+EA+RLAGEMYRGGFELG  AY
Sbjct: 241 NGYANYAEKMVKSLANEFFPDERICDSLIKGWCVDGKLEEARRLAGEMYRGGFELGPMAY 300

Query: 311 NALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXX 370
           NA+LDCVC+LCR+KDPFRL SEAE++L++MD  GVPRNVETFNVLINNLCKIR XXXXXX
Sbjct: 301 NAILDCVCRLCREKDPFRLHSEAEKVLLDMDMYGVPRNVETFNVLINNLCKIRXXXXXXX 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNI 430
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GYG +LD+K YY F+ I
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYGGSLDRKEYYSFLKI 420

Query: 431 LCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVT 490
           LCGIERIDHAL VF KMKKDGCEPGIKTYDLLMGK              NEA ++G+PV 
Sbjct: 421 LCGIERIDHALSVFDKMKKDGCEPGIKTYDLLMGKLCAHNRIDKANALFNEALRKGIPVE 480

Query: 491 PKAYQVDPKYVKKPKD-KKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           PKAYQVDP+Y+KKPK  KK  KKRETLPEKMARKRRRLKQIRLSFVKK +R MRRAF
Sbjct: 481 PKAYQVDPRYLKKPKAVKKKEKKRETLPEKMARKRRRLKQIRLSFVKKSKRMMRRAF 536

[Close]
BLAST of CsGy1G003370 vs. TrEMBL
Match: tr|A0A2P5BN30|A0A2P5BN30_PARAD (Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_224730 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.2e-157
Identity = 360/536 (67.16%), Postives = 409/536 (76.31%), Query Frame = 0 

Query: 11  MPPLPYLQLRTLVLRSLSSS----STNSLKDSARTVLLHRNLTSLFHHFRH------HGA 70
           MPPL  LQLR L LR+LSSS    S++S       V           HFRH        +
Sbjct: 1   MPPLQSLQLRRLFLRNLSSSSSRISSSSFIQKPHLVTSSAPTPLTSSHFRHCQPTSSSAS 60

Query: 71  ALRFSSPLYLSLSHSFSSESVN---NDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSH 130
              F S     LS +FSS S      D DQ ++SL+SEL+KDP+S+PLPI  RL L+FSH
Sbjct: 61  RSHFLSLPQTPLSRTFSSSSSETPVEDHDQIARSLSSELVKDPESEPLPIGLRLNLNFSH 120

Query: 131 VKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQE 190
           V P   +V   LNLS EAGRTVL FN+WL+SNP F H+DE +S+FVD+ GRRKDF AV +
Sbjct: 121 VVPTAPVVLAALNLSPEAGRTVLWFNDWLISNPKFEHSDEILSFFVDYLGRRKDFKAVHD 180

Query: 191 VLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCEN 250
           V+       GPKTL S++ R  RAGR T+ ++FFE ME  YGLKRDKESLR+VVEKLCEN
Sbjct: 181 VIVGSRAAAGPKTLASAVDRLVRAGRATQAVAFFERMERVYGLKRDKESLRLVVEKLCEN 240

Query: 251 GFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYN 310
           G+ ++AEKMVK LANEFFPDE ICD+LIKGWCV+ KL+EA+RLAGEMYRGGFELG  AYN
Sbjct: 241 GYANYAEKMVKSLANEFFPDERICDSLIKGWCVDGKLEEARRLAGEMYRGGFELGPMAYN 300

Query: 311 ALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRXXXXXXX 370
           A+LDCVCKLCR+KDPFRL SEAE++L++MD  GVPRNVETFNVLINNLCKIR XXXXXXX
Sbjct: 301 AILDCVCKLCREKDPFRLHSEAEKVLLDMDMYGVPRNVETFNVLINNLCKIRXXXXXXXX 360

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYGDALDKKAYYEFMNIL 430
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YG++LDKK YY F+ IL
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGESLDKKEYYSFLKIL 420

Query: 431 CGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXXXXXXXXXNEAQKRGVPVTP 490
           CGIERIDHAL VF KMKKDGCEPGIKTYDLLMGK              NEA ++G+PV P
Sbjct: 421 CGIERIDHALSVFDKMKKDGCEPGIKTYDLLMGKLCAHNRIDKANALFNEALRKGIPVEP 480

Query: 491 KAYQVDPKYVKKPKD-KKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 533
           KAYQVDP+Y+KKPK  KK  KKRETLPEKMARKRRRLKQIRLSFVKK +R MRRAF
Sbjct: 481 KAYQVDPRYLKKPKAVKKKEKKRETLPEKMARKRRRLKQIRLSFVKKSKRMMRRAF 536

[Close]
BLAST of CsGy1G003370 vs. TrEMBL
Match: tr|A0A2I4EZR5|A0A2I4EZR5_9ROSI (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Juglans regia OX=51240 GN=LOC108994218 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.4e-156
Identity = 299/495 (60.40%), Postives = 346/495 (69.90%), Query Frame = 0 

Query: 40  RTVLLHRNLTSLFHHFRHHGAALRFSSPLYLSLSHSFS-SESVNNDVDQTSQSLASELLK 99
           R +LL     S F H   H    + S  L L  + + S S S   + D    SL+SELLK
Sbjct: 10  RQLLLPNKPISFFSHLCRHFKYPQSSQSLSLLRTFASSPSSSTPQEPDPIPLSLSSELLK 69

Query: 100 DPDSDPLPITQRLQLSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDET 159
           +PDS+PLPI+QRL LSFSH+ P P LV +TLNL  +AGRTVLGFN WL+S   F HTDET
Sbjct: 70  NPDSEPLPISQRLHLSFSHINPIPSLVLSTLNLCPDAGRTVLGFNHWLISKTSFTHTDET 129

Query: 160 ISYFVDFFGRRKDFNAVQEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNY 219
           +SYFVD+FGRRKDF A+ EVL  G+G+ GPKTL+S+I R  RAGRPT ++SFF+ ME +Y
Sbjct: 130 LSYFVDYFGRRKDFKAIHEVLVNGVGLAGPKTLESAIDRLVRAGRPTDVVSFFQRMEIDY 189

Query: 220 GLKRDKESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAK 279
           GLKRDKESL +VVEKLC NG+ S+AE+MVK+LA EFFPDE ICD L+KGWCV+ KLDEAK
Sbjct: 190 GLKRDKESLLLVVEKLCGNGYASYAERMVKNLAKEFFPDERICDLLVKGWCVDGKLDEAK 249

Query: 280 RLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETF 339
           RLA EMYRGGFE+GT AYNA+LDCVCK+CR+KDPFRL SEAE++LV+MD  GVPRNVETF
Sbjct: 250 RLAEEMYRGGFEIGTMAYNAILDCVCKICREKDPFRLHSEAEKVLVQMDVHGVPRNVETF 309

Query: 340 NVLINNLCKIRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 399
           NVLI NLCKIR+                                               S
Sbjct: 310 NVLITNLCKIRKTEDAMKLFYRMGEWGCYPDETTFLVLIRSLYQAARVGEGDEMIDGMRS 369

Query: 400 VGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKXXXXXXX 459
            GYG  LDKK YY F+ ILCGIERIDHAL VF KMK+DGCEPGIKTYDLLMGK       
Sbjct: 370 AGYGGKLDKKVYYGFLKILCGIERIDHALSVFKKMKEDGCEPGIKTYDLLMGKLCAHNRL 429

Query: 460 XXXXXXXNEAQKRGVPVTPKAYQVDPKYVKKP-KDKKVAKKRETLPEKMARKRRRLKQIR 519
                  NEA+KRG+ + P AY VDP+YVKK  K  K  KKRETLPEKMARKRRRLKQIR
Sbjct: 430 DRANALFNEARKRGIAMEPTAYAVDPRYVKKKVKVVKSQKKRETLPEKMARKRRRLKQIR 489

Query: 520 LSFVKKPRRGMRRAF 533
           LSFVKKP+R MRRA+
Sbjct: 490 LSFVKKPKRMMRRAY 504

The following BLAST results are available for this feature:
BLAST of CsGy1G003370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138218.12.9e-25499.81PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu... [more]
XP_008453300.12.5e-24594.06PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu... [more]
XP_022966044.19.0e-21179.40pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
XP_022933386.13.4e-21079.40pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
XP_023531133.19.9e-21079.02pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
BLAST of CsGy1G003370 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60960.13.1e-13350.86Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G65820.15.5e-1326.63Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G26500.18.0e-1223.68Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G61370.11.2e-0720.40Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G25630.29.5e-0530.30Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsGy1G003370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FME4|PP438_ARATH5.7e-13250.86Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... [more]
sp|Q0WP85|PP150_ARATH1.4e-1324.09Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop... [more]
sp|Q9FH87|PP447_ARATH1.0e-1126.63Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
sp|Q9FZD4|PPR59_ARATH1.4e-1023.68Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis th... [more]
sp|Q9FLJ6|PP439_ARATH2.2e-0620.40Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
BLAST of CsGy1G003370 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BVC3|A0A1S3BVC3_CUCME1.7e-24594.06pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo ... [more]
tr|A0A251PBE0|A0A251PBE0_PRUPE2.2e-16560.26Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G207600 PE=4 SV=1[more]
tr|A0A2P5EBW7|A0A2P5EBW7_9ROSA1.1e-15967.23Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_212220 PE=4 ... [more]
tr|A0A2P5BN30|A0A2P5BN30_PARAD2.2e-15767.16Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_224730 P... [more]
tr|A0A2I4EZR5|A0A2I4EZR5_9ROSI2.4e-15660.40pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Juglans regia... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G003370.1CsGy1G003370.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 401..524
e-value: 2.7E-12
score: 48.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 310..400
e-value: 3.0E-16
score: 61.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 155..309
e-value: 3.5E-17
score: 64.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 263..288
e-value: 0.16
score: 12.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 411..441
e-value: 4.7E-4
score: 18.2
coord: 337..370
e-value: 2.7E-8
score: 31.5
coord: 444..475
e-value: 5.7E-4
score: 17.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 334..380
e-value: 2.1E-12
score: 46.9
coord: 413..453
e-value: 3.5E-7
score: 30.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..217
score: 6.018
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 11.893
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..403
score: 7.64
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 9.372
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..333
score: 5.974
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 406..440
score: 9.69
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..253
score: 5.371
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 441..475
score: 9.405
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 11..526
NoneNo IPR availablePANTHERPTHR24015:SF831PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIALcoord: 11..526

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G003370Cla019045Watermelon (97103) v1cgybwmB082
CsGy1G003370Csa1G015720Cucumber (Chinese Long) v2cgybcuB001
CsGy1G003370MELO3C017241Melon (DHL92) v3.5.1cgybmeB042
CsGy1G003370ClCG06G015530Watermelon (Charleston Gray)cgybwcgB066
CsGy1G003370CSPI01G03390Wild cucumber (PI 183967)cgybcpiB001
CsGy1G003370CmaCh10G002900Cucurbita maxima (Rimu)cgybcmaB007
CsGy1G003370CmaCh11G002170Cucurbita maxima (Rimu)cgybcmaB043
CsGy1G003370CmoCh10G003090Cucurbita moschata (Rifu)cgybcmoB008
CsGy1G003370CmoCh11G002190Cucurbita moschata (Rifu)cgybcmoB040
CsGy1G003370Lsi06G014030Bottle gourd (USVL1VR-Ls)cgyblsiB058
CsGy1G003370Cp4.1LG04g14650Cucurbita pepo (Zucchini)cgybcpeB111
CsGy1G003370MELO3C017241.2Melon (DHL92) v3.6.1cgybmedB036
CsGy1G003370CsaV3_1G003420Cucumber (Chinese Long) v3cgybcucB002
CsGy1G003370Cla97C06G125060Watermelon (97103) v2cgybwmbB066
CsGy1G003370Bhi02G000052Wax gourdcgybwgoB078
CsGy1G003370Carg17871Silver-seed gourdcarcgybB0471
CsGy1G003370Carg09193Silver-seed gourdcarcgybB0592
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G003370Cucumber (Chinese Long) v3cgybcucB004
CsGy1G003370Watermelon (97103) v2cgybwmbB054
CsGy1G003370Cucumber (Gy14) v2cgybcgybB002
CsGy1G003370Cucurbita maxima (Rimu)cgybcmaB029
CsGy1G003370Cucurbita maxima (Rimu)cgybcmaB077
CsGy1G003370Cucurbita maxima (Rimu)cgybcmaB088
CsGy1G003370Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G003370Cucurbita moschata (Rifu)cgybcmoB088
CsGy1G003370Cucurbita pepo (Zucchini)cgybcpeB020
CsGy1G003370Cucurbita pepo (Zucchini)cgybcpeB041
CsGy1G003370Cucurbita pepo (Zucchini)cgybcpeB063
CsGy1G003370Cucurbita pepo (Zucchini)cgybcpeB073
CsGy1G003370Cucurbita pepo (Zucchini)cgybcpeB096
CsGy1G003370Cucumber (Chinese Long) v2cgybcuB004
CsGy1G003370Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G003370Melon (DHL92) v3.5.1cgybmeB006
CsGy1G003370Watermelon (Charleston Gray)cgybwcgB054
CsGy1G003370Watermelon (97103) v1cgybwmB065
CsGy1G003370Wild cucumber (PI 183967)cgybcpiB003
CsGy1G003370Silver-seed gourdcarcgybB0394
CsGy1G003370Silver-seed gourdcarcgybB0468
CsGy1G003370Silver-seed gourdcarcgybB0519
CsGy1G003370Silver-seed gourdcarcgybB0594