CmaCh11G002170 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G002170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCma_Chr11 : 1101592 .. 1103181 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCATTACCGTATCTGCATCTCAGAAGGTTTTTTATTCGGTCTCTTTCATCATCTTCGTATTTATCTGCCTCGTCGTCCTCAAGTTCTTTGAATGAAGCTTCGAAGAGCGTTGTTTTACGTCGAGATTTGACCTCTGTTTTCCACCATTTCCGTCGTCGAGGACCGGCATTGGGGTGTTCTTATCTATCCCAACTCTCACTTTCTCATTCGTTCTTTTCCGAGTCCGGTGAGAATGATGTGGATCAATCATCGCAGTCGCTTGCGGCCGAGCTTCTTAAAGACCCCGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGCTTTGCTTTTCGCATGTTAAACCAAATCCGGAGTTAATTCTCAATACGCTCAATTTCTCCTCGGAAGCTGGCCGAACTGTGTTAGGGTTTAACGAGTGGTTAATATCGAATCCTGATTTTCATCACACGGATGAGACTATATCGTATTTCGTCGATTATTTTGGTCGTAGGAAGGATTTCAATTCGATTCACGAAGTTCTTGCGAAGGGCTCAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACCATTGATCGGTTCGCTCGTGCTGGACGACCCACAAAGTTGTTATCATTTTTCGAGACAATGGAGAAGAATTATGGATTTAAGAGGGATAAAGAGTCGATTAGGATGGTGGTGGAGAAGCTTTGTGAAAACGGCTACGCGAGCCATGCTGAGAAGATGGTCAAAGACTTGGCGCACGAATTTTTCCCAGACGAAGCAATTTGCGATACTCTCATCAAAGGATGGTGCGTCAATGAGAAACTCGATGAAGCGAAAAGGCTGGCAGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTTTGTAGGAAAAAGGATCCGTTTAAGCTTCAATCTGAGGCTGAGGAAATTCTGGTGGAAATGGATTGTCGGGGGGTTCCAAGAAATGTGGAAACTTTCAATGTACTGATTAATAATCTGTGCAAGATTAGGAAAACTACGGATGCACTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAACGCTGAAACGTTCCTTATTTTGATCAAAAGTTTGTATCAAGCGGCCAGGACGGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCGGGATATGCTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATCGAGAGGATTGATCATGCCCTGATTGTTTTTGCGAAGATGAAGAAGGATGGGTGTGAGCCTGGCATTAAGACATATGATCTATTGATGGGAAAACTCTGTGCCCATAATCGTCTGGACAGAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTTCCAGTCACTCCAAAAGCTTATCAGGTTGAGCCAAGGTATGCAAAGAAGCCAAAGGTAAAGAAGGTTGAGAAGAAGAGGGAGACATTGCCAGAGAAAATGGCAAGGAAGAGGAGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCAAAAAAAACAATGCGTAGAGCATTTTGA

mRNA sequence

ATGCCGCCATTACCGTATCTGCATCTCAGAAGGTTTTTTATTCGGTCTCTTTCATCATCTTCGTATTTATCTGCCTCGTCGTCCTCAAGTTCTTTGAATGAAGCTTCGAAGAGCGTTGTTTTACGTCGAGATTTGACCTCTGTTTTCCACCATTTCCGTCGTCGAGGACCGGCATTGGGGTGTTCTTATCTATCCCAACTCTCACTTTCTCATTCGTTCTTTTCCGAGTCCGGTGAGAATGATGTGGATCAATCATCGCAGTCGCTTGCGGCCGAGCTTCTTAAAGACCCCGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGCTTTGCTTTTCGCATGTTAAACCAAATCCGGAGTTAATTCTCAATACGCTCAATTTCTCCTCGGAAGCTGGCCGAACTGTGTTAGGGTTTAACGAGTGGTTAATATCGAATCCTGATTTTCATCACACGGATGAGACTATATCGTATTTCGTCGATTATTTTGGTCGTAGGAAGGATTTCAATTCGATTCACGAAGTTCTTGCGAAGGGCTCAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACCATTGATCGGTTCGCTCGTGCTGGACGACCCACAAAGTTGTTATCATTTTTCGAGACAATGGAGAAGAATTATGGATTTAAGAGGGATAAAGAGTCGATTAGGATGGTGGTGGAGAAGCTTTGTGAAAACGGCTACGCGAGCCATGCTGAGAAGATGGTCAAAGACTTGGCGCACGAATTTTTCCCAGACGAAGCAATTTGCGATACTCTCATCAAAGGATGGTGCGTCAATGAGAAACTCGATGAAGCGAAAAGGCTGGCAGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTTTGTAGGAAAAAGGATCCGTTTAAGCTTCAATCTGAGGCTGAGGAAATTCTGGTGGAAATGGATTGTCGGGGGGTTCCAAGAAATGTGGAAACTTTCAATGTACTGATTAATAATCTGTGCAAGATTAGGAAAACTACGGATGCACTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAACGCTGAAACGTTCCTTATTTTGATCAAAAGTTTGTATCAAGCGGCCAGGACGGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCGGGATATGCTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATCGAGAGGATTGATCATGCCCTGATTGTTTTTGCGAAGATGAAGAAGGATGGGTGTGAGCCTGGCATTAAGACATATGATCTATTGATGGGAAAACTCTGTGCCCATAATCGTCTGGACAGAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTTCCAGTCACTCCAAAAGCTTATCAGGTTGAGCCAAGGTATGCAAAGAAGCCAAAGGTAAAGAAGGTTGAGAAGAAGAGGGAGACATTGCCAGAGAAAATGGCAAGGAAGAGGAGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCAAAAAAAACAATGCGTAGAGCATTTTGA

Coding sequence (CDS)

ATGCCGCCATTACCGTATCTGCATCTCAGAAGGTTTTTTATTCGGTCTCTTTCATCATCTTCGTATTTATCTGCCTCGTCGTCCTCAAGTTCTTTGAATGAAGCTTCGAAGAGCGTTGTTTTACGTCGAGATTTGACCTCTGTTTTCCACCATTTCCGTCGTCGAGGACCGGCATTGGGGTGTTCTTATCTATCCCAACTCTCACTTTCTCATTCGTTCTTTTCCGAGTCCGGTGAGAATGATGTGGATCAATCATCGCAGTCGCTTGCGGCCGAGCTTCTTAAAGACCCCGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGCTTTGCTTTTCGCATGTTAAACCAAATCCGGAGTTAATTCTCAATACGCTCAATTTCTCCTCGGAAGCTGGCCGAACTGTGTTAGGGTTTAACGAGTGGTTAATATCGAATCCTGATTTTCATCACACGGATGAGACTATATCGTATTTCGTCGATTATTTTGGTCGTAGGAAGGATTTCAATTCGATTCACGAAGTTCTTGCGAAGGGCTCAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACCATTGATCGGTTCGCTCGTGCTGGACGACCCACAAAGTTGTTATCATTTTTCGAGACAATGGAGAAGAATTATGGATTTAAGAGGGATAAAGAGTCGATTAGGATGGTGGTGGAGAAGCTTTGTGAAAACGGCTACGCGAGCCATGCTGAGAAGATGGTCAAAGACTTGGCGCACGAATTTTTCCCAGACGAAGCAATTTGCGATACTCTCATCAAAGGATGGTGCGTCAATGAGAAACTCGATGAAGCGAAAAGGCTGGCAGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTTTGTAGGAAAAAGGATCCGTTTAAGCTTCAATCTGAGGCTGAGGAAATTCTGGTGGAAATGGATTGTCGGGGGGTTCCAAGAAATGTGGAAACTTTCAATGTACTGATTAATAATCTGTGCAAGATTAGGAAAACTACGGATGCACTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAACGCTGAAACGTTCCTTATTTTGATCAAAAGTTTGTATCAAGCGGCCAGGACGGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCGGGATATGCTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATCGAGAGGATTGATCATGCCCTGATTGTTTTTGCGAAGATGAAGAAGGATGGGTGTGAGCCTGGCATTAAGACATATGATCTATTGATGGGAAAACTCTGTGCCCATAATCGTCTGGACAGAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTTCCAGTCACTCCAAAAGCTTATCAGGTTGAGCCAAGGTATGCAAAGAAGCCAAAGGTAAAGAAGGTTGAGAAGAAGAGGGAGACATTGCCAGAGAAAATGGCAAGGAAGAGGAGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCAAAAAAAACAATGCGTAGAGCATTTTGA

Protein sequence

MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALGCSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF
Homology
[Close]
BLAST of CmaCh11G002170 vs. Swiss-Prot
Match: PP438_ARATH (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana GN=PNM1 PE=1 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 4.3e-177
Identity = 323/532 (60.71%), Postives = 396/532 (74.44%), Query Frame = 1 

Query: 1   MPP-LPYLHLRRFFIRS-LSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPA 60
           MPP LP L LRR  +RS +SSSS  +  S    ++       L    +S+F  F  R   
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISSKPLFSPLPPSRSSIFSTFPSR--- 60

Query: 61  LGCSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPN 120
                      S    +ES   D ++ + S + EL  +PD +   I++R  L FSH+ PN
Sbjct: 61  ---------FFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPN 120

Query: 121 PELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAK 180
           P+LIL TLN S EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E+++K
Sbjct: 121 PDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 180

Query: 181 GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYAS 240
             GI+G KTL S IDR  RAGRP ++  FFE ME +YG KRDKES+ +VV+KLCE G+AS
Sbjct: 181 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS 240

Query: 241 HAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLD 300
            AEKMVK+ A+E FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LD
Sbjct: 241 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 300

Query: 301 CVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRM 360
           CVCKLCRKKDPFKLQ E E++L+EM+ RGVPRN ETFNVLINNLCKIR+T +A+ LF RM
Sbjct: 301 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 360

Query: 361 GEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIE 420
           GEWGC P+AET+L+LI+SLYQAAR GEGDEMID+M+SAGY + L+KK YY FLKILCGIE
Sbjct: 361 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 420

Query: 421 RIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQ 480
           R++HA+ VF  MK +GC+PGIKTYDLLMGK+CA+N+L RAN L+ EA K+G+ V+PK Y+
Sbjct: 421 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 480

Query: 481 VEPRYAKKPKVKKVE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRR 528
           V+PR+ KK K K+V+   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 VDPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]
BLAST of CmaCh11G002170 vs. Swiss-Prot
Match: PP439_ARATH (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-31
Identity = 92/417 (22.06%), Postives = 197/417 (47.24%), Query Frame = 1 

Query: 115 VKPNPELILNTLNF--SSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSI 174
           V P+  L+   +    +  + R +L F  W   +      D+  +Y +     +KD  ++
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 175 HEVLA---KGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVE 234
             +L+   K +     +T     +   + G+    +  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 235 KLCENGYASHAEKMVKDLAHEFFPDE-AICDTLIKGWCVNEKLDEAKRLAGEMYRGGFEL 294
            LC  G+   A  ++         +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 295 GTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKT 354
               +N+LL C+C+    ++P  L  EA  I++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 355 TDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYY 414
            ++  +  +M   GC P+  ++  +++ LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 415 EFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKR 474
           + + +LCG+ER++ AL +F KMK+       + YDLL+ KLC     ++   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 475 GVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
            V ++     ++P   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

[Close]
BLAST of CmaCh11G002170 vs. Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.6e-30
Identity = 94/368 (25.54%), Postives = 157/368 (42.66%), Query Frame = 1 

Query: 108 LQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRK 167
           L L  S +   P LI+  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNS----IHEVLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKES 227
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 228 IRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYR 287
              +++ LC+NG    A K+ +D+  +F P+     +L+ GWC   KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 288 GGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLC 347
            G E     +  LL       +  D + L +       +M  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMN-------DMRKRGFEPNVNCYTVLIQALC 325

Query: 348 KIRKTTD-ALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADAL 407
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 408 DKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLF 467
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    +  A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 468 NEAQKRGV 471
           NE +  G+
Sbjct: 446 NEMEANGL 443

[Close]
BLAST of CmaCh11G002170 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.8e-27
Identity = 87/378 (23.02%), Postives = 158/378 (41.80%), Query Frame = 1 

Query: 104 ITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYF 163
           +   ++L  SH     +LI+  L     A +    F  W      F H   T +  +   
Sbjct: 151 VLDEMKLDLSH-----DLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSIL 210

Query: 164 GRRKDFNSIHEVLAK--GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDK 223
            + + F ++  VL +    G+   +T    +  FA A    K +  FE M+K Y FK   
Sbjct: 211 AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFKIGV 270

Query: 224 ESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEM 283
           E+I  +++ L        A+ +   L   F P+      L+ GWC    L EA R+  +M
Sbjct: 271 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 330

Query: 284 YRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINN 343
              G +    A+N +L+ + +  +K D  KL          M  +G   NV ++ ++I +
Sbjct: 331 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL-------FHVMKSKGPCPNVRSYTIMIRD 390

Query: 344 LCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADA 403
            CK      A+  F  M + G  P+A  +  LI       +     E++  M+  G+   
Sbjct: 391 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP- 450

Query: 404 LDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSL 463
            D K Y   +K++   +  +H   ++ KM ++  EP I T++++M         +   ++
Sbjct: 451 -DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 510

Query: 464 FNEAQKRGVPVTPKAYQV 480
           ++E  K+G+     +Y V
Sbjct: 511 WDEMIKKGICPDDNSYTV 513

[Close]
BLAST of CmaCh11G002170 vs. Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 6.3e-27
Identity = 88/378 (23.28%), Postives = 158/378 (41.80%), Query Frame = 1 

Query: 104 ITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYF 163
           +   ++L  SH     +LI+  L     A +    F  W      F H   T +  +   
Sbjct: 151 VLDEMKLDLSH-----DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSIL 210

Query: 164 GRRKDFNSIHEVLAK--GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDK 223
            + + F ++  VL +    G+   +T    +  FA A    K +  FE M+K Y FK   
Sbjct: 211 AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFKIGV 270

Query: 224 ESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEM 283
           E+I  +++ L        A+ +   L   F P+      L+ GWC    L EA R+  +M
Sbjct: 271 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 330

Query: 284 YRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINN 343
              G +    A+N +L+ + +  +K D  KL          M  +G   NV ++ ++I +
Sbjct: 331 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL-------FHVMKSKGPCPNVRSYTIMIRD 390

Query: 344 LCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADA 403
            CK      A+  F  M + G  P+A  +  LI       +     E++  M+  G+   
Sbjct: 391 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP- 450

Query: 404 LDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSL 463
            D K Y   +K++   +  +HA  ++ KM ++  EP I T++++M         +   ++
Sbjct: 451 -DGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 510

Query: 464 FNEAQKRGVPVTPKAYQV 480
           + E  K+G+     +Y V
Sbjct: 511 WEEMIKKGICPDDNSYTV 513

[Close]
BLAST of CmaCh11G002170 vs. TrEMBL
Match: D7SIL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05090 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 2.6e-197
Identity = 358/535 (66.92%), Postives = 432/535 (80.75%), Query Frame = 1 

Query: 3   PLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALGCS 62
           PL  L LRR  +R  SSSS  S+SSSSSS +   +S  L   L+          P   CS
Sbjct: 7   PLTSLQLRRLLLRCFSSSSSSSSSSSSSSSSSLVQSYCLSPTLSL--------DPYCLCS 66

Query: 63  ----YLS-QLSLSHSFFSE---SGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSH 122
               ++S    LS  F S+   S ++D  Q +QSL++ELLKDPD +P+PI +RLQL FSH
Sbjct: 67  SQRHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSH 126

Query: 123 VKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHE 182
           + P+P LIL TLN S +AGRTVLGF +WL SNP F H+DETIS+FVDYFGRRKDF +IHE
Sbjct: 127 ITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHE 186

Query: 183 VLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCEN 242
           VL  G   +GAKTL S IDR  RAGR T+++SFF+ ME +YGF+RD+ES+ MVV KLCE+
Sbjct: 187 VLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEH 246

Query: 243 GYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYN 302
           G+ASHAEK+VK++A+E FP+E ICD LIKGWCV+ KLDEA+RLA EM+RGGFE+GT AYN
Sbjct: 247 GFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYN 306

Query: 303 ALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNL 362
           ++LDC+CKLCRKKDPF+L+SEAE+ILV+MD  GVPRNVETFNVLI NLCKIRKT DA+ L
Sbjct: 307 SILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKL 366

Query: 363 FHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKIL 422
           F+RMGEWGC+PN  TFL+L +SLYQAAR GEGDEMIDRM+SAG+ +ALDKKAYYEF+KIL
Sbjct: 367 FYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKIL 426

Query: 423 CGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTP 482
           CGIERIDHA+ +F+KMK+DGC+PGIKTYDLLMGKLCAH RLD+AN+LF+EA  RGVPV  
Sbjct: 427 CGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGVPVES 486

Query: 483 KAYQVEPRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 530
           KAY+++PR+ KKP V K EKKRETLPEKMARKRRRL++IRLSFVKKPK+ MRRAF
Sbjct: 487 KAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKR-MRRAF 532

[Close]
BLAST of CmaCh11G002170 vs. TrEMBL
Match: A0A061G509_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_014302 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 5.5e-195
Identity = 325/444 (73.20%), Postives = 386/444 (86.94%), Query Frame = 1 

Query: 83  DQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEW 142
           D  +QSL+ E+LK+PDLDPLPIT+RLQL FSH+KP   LI  TLN S EAGRTVLGFN+W
Sbjct: 49  DPIAQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDW 108

Query: 143 LISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGSGISGAKTLRSTIDRFARAGRPT 202
           L+S+P+F+HTDET+S+F+DYFGRRKDF + H++L     ++G KT  S++DR  RAGRP 
Sbjct: 109 LLSDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKSVAGPKTFESSVDRLVRAGRPA 168

Query: 203 KLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLI 262
           ++L FFE M K+YGFKRDKES+R++VEKLCENGYAS+AEKMVK+ A+E FPDE ICD LI
Sbjct: 169 QVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSANEIFPDEMICDLLI 228

Query: 263 KGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVE 322
           KGWCV+ KL+EAKRLAGEMYRGGFE+GT AYNA+LDCVCKLCRKKDPF+L SEAE++L++
Sbjct: 229 KGWCVDGKLEEAKRLAGEMYRGGFEIGTMAYNAMLDCVCKLCRKKDPFRLHSEAEKVLLD 288

Query: 323 MDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAAR 382
           MD  GVPRNVETFNVL+NNLCKIRKT DA+ LF+RMGEWGC+P+AE++LILI+SLYQAAR
Sbjct: 289 MDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYRMGEWGCYPDAESYLILIRSLYQAAR 348

Query: 383 TGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTY 442
             EGDEMIDRM+SAG+ D L +K YY FLKILCG+ER++HA+IVF KMK DGC+PGIKTY
Sbjct: 349 VAEGDEMIDRMKSAGFGDKLGEKEYYSFLKILCGVERVEHAIIVFKKMKADGCKPGIKTY 408

Query: 443 DLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEK 502
           DLLMGK C HNRLDRAN+L+NEA + GVPV PK Y+V+PRY KK K  K EKKRETLPEK
Sbjct: 409 DLLMGKWCGHNRLDRANALYNEAVENGVPVEPKPYRVDPRYMKKTKAVKEEKKRETLPEK 468

Query: 503 MARKRRRLKQIRLSFVKKPKKTMR 527
           MARKRRRLKQIRLSFVKKPK+TMR
Sbjct: 469 MARKRRRLKQIRLSFVKKPKRTMR 492

[Close]
BLAST of CmaCh11G002170 vs. TrEMBL
Match: A0A0D2T3P6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G199900 PE=4 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 2.8e-191
Identity = 344/528 (65.15%), Postives = 406/528 (76.89%), Query Frame = 1 

Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60
           MPPL  L LRR   R +SS S     +  S   + + +            HF +    + 
Sbjct: 1   MPPLTSLQLRRLLHRCVSSPSPFQPHALLSPKPQFTPT------------HFPKLPFVIS 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120
             + +Q                D  + SL+AELLKDP LDPL IT RLQL FSH+KP P 
Sbjct: 61  KPFSTQ---------NPSPQTPDPVALSLSAELLKDPSLDPLAITPRLQLHFSHIKPTPL 120

Query: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LI  TLN S EAGRTVLGFN+W++S+PDF+HTDET+S+FVDYFGRRKDF + H++L    
Sbjct: 121 LISQTLNLSPEAGRTVLGFNDWVLSDPDFNHTDETLSFFVDYFGRRKDFKAAHDLLVNHK 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240
            ++G KTL S+IDR  RAGRPT++L FFE MEK+YGF RDKES+++VVEKLCENGYAS+A
Sbjct: 181 SVAGPKTLNSSIDRLVRAGRPTQVLGFFERMEKDYGFNRDKESLKLVVEKLCENGYASYA 240

Query: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKD A+E FPDE ICD LIKGWCV+ KL+EA+RLAGEMYRGGFE+GT AYNA+LDCV
Sbjct: 241 EKLVKDSANEIFPDEMICDLLIKGWCVDGKLEEARRLAGEMYRGGFEIGTMAYNAMLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCR+KDPF+L SEAE++L++MD  GVPRNVETFN+L+NNLCKIRKT DA+ LF RMGE
Sbjct: 301 CKLCREKDPFRLHSEAEKVLLDMDFNGVPRNVETFNLLLNNLCKIRKTEDAMKLFFRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGC+PNAE++LI+I+SLYQAAR GEGDEMID M+SAG+ D L KK YY FLKILCGIER+
Sbjct: 361 WGCYPNAESYLIMIRSLYQAARIGEGDEMIDGMKSAGFGDQLGKKEYYGFLKILCGIERV 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           +HA+ VF KMK DGCEPGIKTYDLLMGK CAHNRLDRAN+L+NEA K GVPV PK Y+V+
Sbjct: 421 EHAMSVFKKMKADGCEPGIKTYDLLMGKWCAHNRLDRANALYNEALKNGVPVEPKPYRVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRA 529
           PRY KK K  K EKKRET  EKMARKRRRLKQIRLSFVKK K  MR A
Sbjct: 481 PRYMKKTKAVKKEKKRETFSEKMARKRRRLKQIRLSFVKKSKGRMRSA 507

[Close]
BLAST of CmaCh11G002170 vs. TrEMBL
Match: A0A151U5C5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_007157 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 7.2e-187
Identity = 349/527 (66.22%), Postives = 405/527 (76.85%), Query Frame = 1 

Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60
           MPPL  L LRR  +RS S S      +SSS ++       L R  +S FH      P   
Sbjct: 1   MPPLASLQLRRLLLRSRSFSF-----ASSSPIHPPPP---LPRQPSSHFHSRTLFTP--- 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120
               S L  +  F SE+ +   D  + SL++ELLK+PD D L +++RL L FSHV P P 
Sbjct: 61  ----SSLFFTRHFSSET-QTQTDPIAHSLSSELLKEPDSDSLAVSQRLHLSFSHVTPTPS 120

Query: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LIL TLN S EAGRTVLGF++WL SNP F HTD+T+SYFVDYFGRRKDF + H+VL+ G+
Sbjct: 121 LILQTLNLSPEAGRTVLGFHKWLASNPQFSHTDDTLSYFVDYFGRRKDFKATHDVLS-GA 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240
             +G KTL S IDR  RAGRP + + FFE ME++YG KRD+ S+ +VVEKLC  G+AS+A
Sbjct: 181 AAAGPKTLSSAIDRLVRAGRPNQAVQFFERMERDYGLKRDRASLNVVVEKLCSKGFASYA 240

Query: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA  FFPDEA CD LIKGWCV+ KL+EA+RLAGEMYRGGFELG  AYNA+LDCV
Sbjct: 241 EKMVKDLAKVFFPDEATCDLLIKGWCVDGKLEEAQRLAGEMYRGGFELGVGAYNAMLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCR+KDPF+L SEAE++LVEM+ RGVPRNVETFNV I +LCKIRKT DAL LF  MG 
Sbjct: 301 CKLCREKDPFRLHSEAEKVLVEMEHRGVPRNVETFNVFITHLCKIRKTEDALALFRSMGR 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGC+PN  TF++LIKSLYQAAR  EGDEMIDRMRSAGY + LDKKAYY+FLKILCGIER+
Sbjct: 361 WGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMRSAGYGEFLDKKAYYQFLKILCGIERV 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL VFA MK DGCEPG++TYDLLMGKL AHNR+DRAN+LFNEAQ RG+PV  K Y V+
Sbjct: 421 DHALSVFAMMKADGCEPGVQTYDLLMGKLGAHNRVDRANALFNEAQSRGLPVVLKEYAVD 480

Query: 481 PRY-AKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMR 527
           PRY  KK KV K EKKRETLPEKMARKR RLKQIRLSFVKKPK+ MR
Sbjct: 481 PRYLKKKKKVVKGEKKRETLPEKMARKRSRLKQIRLSFVKKPKRVMR 510

[Close]
BLAST of CmaCh11G002170 vs. TrEMBL
Match: A0A059A5E5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02538 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 9.4e-187
Identity = 326/454 (71.81%), Postives = 376/454 (82.82%), Query Frame = 1 

Query: 79  ENDVDQSSQSLAAELLK------DPDLDPLPITKRLQLCFSHVKPNPELILNTLNFSSEA 138
           + D D+ ++S++ EL        D + D L + +RL L FSHV P+P LIL+TLN S +A
Sbjct: 82  DRDRDEVARSISTELTAEAAVEADAEGDALSVVQRLALNFSHVTPDPGLILSTLNLSPDA 141

Query: 139 GRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGSGISGAKTLRSTI 198
           GR VLGF +WL  NPDF HTDET+S FVDY GRRKDF +I E+++    ++ +KTL S I
Sbjct: 142 GRAVLGFYQWLAQNPDFAHTDETLSMFVDYLGRRKDFKAIDELMSDAKDVASSKTLESVI 201

Query: 199 DRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHAEKMVKDLAHEFF 258
           DR  RAGRP + + FFE ME++YG KRDKES++M+VEKLCE GYA+ AEKMVK+LAHEFF
Sbjct: 202 DRLVRAGRPVQAVEFFERMERDYGLKRDKESMKMMVEKLCEKGYATCAEKMVKNLAHEFF 261

Query: 259 PDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFKL 318
           PDE +CD LIKGWCV  KLDEA RLA EMYRGGFE+GT  YNALLDCVCKLCRKKDPF+L
Sbjct: 262 PDEHVCDMLIKGWCVAGKLDEANRLAREMYRGGFEIGTAGYNALLDCVCKLCRKKDPFQL 321

Query: 319 QSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETFLI 378
            SEAE+ILV+MD  GVPRNVETFNVLI NLCKIRKT DA+ LFHRMGEWGC+PN ETFL+
Sbjct: 322 NSEAEQILVDMDYYGVPRNVETFNVLIGNLCKIRKTEDAMKLFHRMGEWGCYPNEETFLV 381

Query: 379 LIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKMKK 438
           L +SLYQAAR GEGDEMIDRM+SAGY  ALD+KAYY FLKILCGIERIDHAL VF KMK 
Sbjct: 382 LTRSLYQAARVGEGDEMIDRMKSAGY--ALDRKAYYGFLKILCGIERIDHALTVFKKMKA 441

Query: 439 DGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPRYAKKPKVKKV 498
           DGCEPGIKTYDLLMGK CAHNRLD+AN+LFNEA +RGVPV PKAY+++PR+ KKPK +K 
Sbjct: 442 DGCEPGIKTYDLLMGKSCAHNRLDKANALFNEALRRGVPVEPKAYRLDPRFMKKPKAEKK 501

Query: 499 EKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMR 527
           EKKRETLPEKMARKRRRLKQIRLSFVKKPK+ MR
Sbjct: 502 EKKRETLPEKMARKRRRLKQIRLSFVKKPKRMMR 533

[Close]
BLAST of CmaCh11G002170 vs. TAIR10
Match: AT5G60960.1 (AT5G60960.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 622.5 bits (1604), Expect = 2.4e-178
Identity = 323/532 (60.71%), Postives = 396/532 (74.44%), Query Frame = 1 

Query: 1   MPP-LPYLHLRRFFIRS-LSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPA 60
           MPP LP L LRR  +RS +SSSS  +  S    ++       L    +S+F  F  R   
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISSKPLFSPLPPSRSSIFSTFPSR--- 60

Query: 61  LGCSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPN 120
                      S    +ES   D ++ + S + EL  +PD +   I++R  L FSH+ PN
Sbjct: 61  ---------FFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPN 120

Query: 121 PELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAK 180
           P+LIL TLN S EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E+++K
Sbjct: 121 PDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 180

Query: 181 GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYAS 240
             GI+G KTL S IDR  RAGRP ++  FFE ME +YG KRDKES+ +VV+KLCE G+AS
Sbjct: 181 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS 240

Query: 241 HAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLD 300
            AEKMVK+ A+E FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LD
Sbjct: 241 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 300

Query: 301 CVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRM 360
           CVCKLCRKKDPFKLQ E E++L+EM+ RGVPRN ETFNVLINNLCKIR+T +A+ LF RM
Sbjct: 301 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 360

Query: 361 GEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIE 420
           GEWGC P+AET+L+LI+SLYQAAR GEGDEMID+M+SAGY + L+KK YY FLKILCGIE
Sbjct: 361 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 420

Query: 421 RIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQ 480
           R++HA+ VF  MK +GC+PGIKTYDLLMGK+CA+N+L RAN L+ EA K+G+ V+PK Y+
Sbjct: 421 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 480

Query: 481 VEPRYAKKPKVKKVE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRR 528
           V+PR+ KK K K+V+   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 VDPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]
BLAST of CmaCh11G002170 vs. TAIR10
Match: AT5G61370.1 (AT5G61370.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 6.3e-33
Identity = 92/417 (22.06%), Postives = 197/417 (47.24%), Query Frame = 1 

Query: 115 VKPNPELILNTLNF--SSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSI 174
           V P+  L+   +    +  + R +L F  W   +      D+  +Y +     +KD  ++
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 175 HEVLA---KGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVE 234
             +L+   K +     +T     +   + G+    +  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 235 KLCENGYASHAEKMVKDLAHEFFPDE-AICDTLIKGWCVNEKLDEAKRLAGEMYRGGFEL 294
            LC  G+   A  ++         +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 295 GTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKT 354
               +N+LL C+C+    ++P  L  EA  I++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 355 TDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYY 414
            ++  +  +M   GC P+  ++  +++ LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 415 EFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKR 474
           + + +LCG+ER++ AL +F KMK+       + YDLL+ KLC     ++   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 475 GVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
            V ++     ++P   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

[Close]
BLAST of CmaCh11G002170 vs. TAIR10
Match: AT3G49730.1 (AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-31
Identity = 94/368 (25.54%), Postives = 157/368 (42.66%), Query Frame = 1 

Query: 108 LQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRK 167
           L L  S +   P LI+  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNS----IHEVLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKES 227
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 228 IRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYR 287
              +++ LC+NG    A K+ +D+  +F P+     +L+ GWC   KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 288 GGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLC 347
            G E     +  LL       +  D + L +       +M  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMN-------DMRKRGFEPNVNCYTVLIQALC 325

Query: 348 KIRKTTD-ALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADAL 407
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 408 DKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLF 467
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    +  A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 468 NEAQKRGV 471
           NE +  G+
Sbjct: 446 NEMEANGL 443

[Close]
BLAST of CmaCh11G002170 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-28
Identity = 87/378 (23.02%), Postives = 158/378 (41.80%), Query Frame = 1 

Query: 104 ITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYF 163
           +   ++L  SH     +LI+  L     A +    F  W      F H   T +  +   
Sbjct: 151 VLDEMKLDLSH-----DLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSIL 210

Query: 164 GRRKDFNSIHEVLAK--GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDK 223
            + + F ++  VL +    G+   +T    +  FA A    K +  FE M+K Y FK   
Sbjct: 211 AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFKIGV 270

Query: 224 ESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEM 283
           E+I  +++ L        A+ +   L   F P+      L+ GWC    L EA R+  +M
Sbjct: 271 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 330

Query: 284 YRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINN 343
              G +    A+N +L+ + +  +K D  KL          M  +G   NV ++ ++I +
Sbjct: 331 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL-------FHVMKSKGPCPNVRSYTIMIRD 390

Query: 344 LCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADA 403
            CK      A+  F  M + G  P+A  +  LI       +     E++  M+  G+   
Sbjct: 391 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP- 450

Query: 404 LDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSL 463
            D K Y   +K++   +  +H   ++ KM ++  EP I T++++M         +   ++
Sbjct: 451 -DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 510

Query: 464 FNEAQKRGVPVTPKAYQV 480
           ++E  K+G+     +Y V
Sbjct: 511 WDEMIKKGICPDDNSYTV 513

[Close]
BLAST of CmaCh11G002170 vs. TAIR10
Match: AT3G62470.1 (AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 3.6e-28
Identity = 88/378 (23.28%), Postives = 158/378 (41.80%), Query Frame = 1 

Query: 104 ITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYF 163
           +   ++L  SH     +LI+  L     A +    F  W      F H   T +  +   
Sbjct: 151 VLDEMKLDLSH-----DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSIL 210

Query: 164 GRRKDFNSIHEVLAK--GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDK 223
            + + F ++  VL +    G+   +T    +  FA A    K +  FE M+K Y FK   
Sbjct: 211 AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK-YKFKIGV 270

Query: 224 ESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEM 283
           E+I  +++ L        A+ +   L   F P+      L+ GWC    L EA R+  +M
Sbjct: 271 ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 330

Query: 284 YRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINN 343
              G +    A+N +L+ + +  +K D  KL          M  +G   NV ++ ++I +
Sbjct: 331 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL-------FHVMKSKGPCPNVRSYTIMIRD 390

Query: 344 LCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADA 403
            CK      A+  F  M + G  P+A  +  LI       +     E++  M+  G+   
Sbjct: 391 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP- 450

Query: 404 LDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSL 463
            D K Y   +K++   +  +HA  ++ KM ++  EP I T++++M         +   ++
Sbjct: 451 -DGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 510

Query: 464 FNEAQKRGVPVTPKAYQV 480
           + E  K+G+     +Y V
Sbjct: 511 WEEMIKKGICPDDNSYTV 513

[Close]
BLAST of CmaCh11G002170 vs. NCBI nr
Match: gi|659106304|ref|XP_008453300.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis melo])

HSP 1 Score: 917.1 bits (2369), Expect = 1.4e-263
Identity = 455/529 (86.01%), Postives = 490/529 (92.63%), Query Frame = 1 

Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60
           MPPLPYL LR  F+RSLS       SSS++SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLQLRSLFLRSLS-------SSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120
            S    LSLSHSF SESG NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQL FSHVKPNPE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           L+ NTLN SSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKL+SFFETMEKNYG KRDK+S+RMVVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+TTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRM+S GY DALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGKLCAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 530
           P+Y KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]
BLAST of CmaCh11G002170 vs. NCBI nr
Match: gi|449440893|ref|XP_004138218.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis sativus])

HSP 1 Score: 898.7 bits (2321), Expect = 5.0e-258
Identity = 446/529 (84.31%), Postives = 484/529 (91.49%), Query Frame = 1 

Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60
           MPPLPYL LR   +RSLS       SSS++SL +++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLQLRTLVLRSLS-------SSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120
            S    LSLSHSF SES  N VDQ+SQSLA+ELLKDPD DPLPIT+RLQL FSHVKPNPE
Sbjct: 61  FSSPLYLSLSHSFSSESVNNHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           L+ NTLN SSEAGRTVLGFNEWL+SNPDFHHTDETISYFVD+FGRRKDFN++ EVLAKG 
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240
           GI+G KTL+S+I RFARAGRPTKL+SFFETME NYG KRDKES+RMVVEKLCENG+ SHA
Sbjct: 181 GINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHA 240

Query: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+TTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRM+S GY DALDKKAYYEF+ ILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMNILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGKLCAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 530
           P+Y KKPK KKV KKRETLPEKMARKRRRLKQIRLSFVKKP++ MRRAF
Sbjct: 481 PKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 522

[Close]
BLAST of CmaCh11G002170 vs. NCBI nr
Match: gi|645269649|ref|XP_008240094.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Prunus mume])

HSP 1 Score: 699.1 bits (1803), Expect = 5.8e-198
Identity = 358/539 (66.42%), Postives = 423/539 (78.48%), Query Frame = 1 

Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60
           M PL  L LRR  +R      YLS SSSS S +   ++ +L         H+ +  PA+ 
Sbjct: 1   MRPLQPLQLRRLLLR------YLSTSSSSPSSSPTIQTHILFHSRKPTHFHYAQ--PAIT 60

Query: 61  CSYLSQ-LSLSH--------SFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLC 120
            +  S  LSL H        S  S + ++D  Q +QSL++ELL DP  DPL +T+RLQL 
Sbjct: 61  TTASSHFLSLLHFCVSKPFSSSTSPAHDSDQSQLAQSLSSELLIDPSSDPLSVTQRLQLS 120

Query: 121 FSHVKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNS 180
           FSH+ P P L+ + LN S +AGR V+GFNEWLISNP F HTDET+SYFVDYFGRRKDF +
Sbjct: 121 FSHITPTPSLVQSVLNLSPDAGRAVIGFNEWLISNPTFEHTDETLSYFVDYFGRRKDFKA 180

Query: 181 IHEVLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKL 240
            H+V+    G++G KT  S+IDR  RAGRP + +SFFE MEK+YG KRDK S+R+VVEKL
Sbjct: 181 THDVIVSAGGVAGPKTFASSIDRLVRAGRPAQAVSFFERMEKDYGLKRDKASLRLVVEKL 240

Query: 241 CENGYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTT 300
           CENG+AS+AEKMVK LA+EFFPDE ICD LIKGWC++ KL+EA+RLAGEMYRGGFE+GTT
Sbjct: 241 CENGFASNAEKMVKSLANEFFPDEYICDLLIKGWCIDGKLEEARRLAGEMYRGGFEIGTT 300

Query: 301 AYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDA 360
           AYNA+LDCV KLCRKKDPF+L  EAE+ILV+MD  GVPRN ETFNVLI+NLCK+RKT DA
Sbjct: 301 AYNAILDCVSKLCRKKDPFRLHLEAEQILVDMDTHGVPRNAETFNVLISNLCKLRKTEDA 360

Query: 361 LNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFL 420
           LNLFHRMG+WGC+PN  TFL+LI+SLYQAAR GEGDEMIDRM+SAG+  ALDKKAYY F+
Sbjct: 361 LNLFHRMGQWGCYPNETTFLVLIRSLYQAARIGEGDEMIDRMKSAGFGGALDKKAYYGFM 420

Query: 421 KILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVP 480
           KILCGIERIDHA+ VF KMK+DGCEPGIK+YDLL+GKL AHNR DRA +LFNEAQKRGV 
Sbjct: 421 KILCGIERIDHAMRVFKKMKEDGCEPGIKSYDLLIGKLYAHNRADRATALFNEAQKRGVA 480

Query: 481 VTPKAYQVEPRY-AKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 530
           +T KAYQ +PR+  KKPK  K EKKRET PEKMARK+RRLKQIRLSFVKKPKK MRRA+
Sbjct: 481 LTQKAYQADPRFLKKKPKAAKKEKKRETFPEKMARKKRRLKQIRLSFVKKPKKMMRRAY 531

[Close]
BLAST of CmaCh11G002170 vs. NCBI nr
Match: gi|731426036|ref|XP_010663464.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Vitis vinifera])

HSP 1 Score: 696.4 bits (1796), Expect = 3.8e-197
Identity = 358/535 (66.92%), Postives = 432/535 (80.75%), Query Frame = 1 

Query: 3   PLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALGCS 62
           PL  L LRR  +R  SSSS  S+SSSSSS +   +S  L   L+          P   CS
Sbjct: 7   PLTSLQLRRLLLRCFSSSSSSSSSSSSSSSSSLVQSYCLSPTLSL--------DPYCLCS 66

Query: 63  ----YLS-QLSLSHSFFSE---SGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSH 122
               ++S    LS  F S+   S ++D  Q +QSL++ELLKDPD +P+PI +RLQL FSH
Sbjct: 67  SQRHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSH 126

Query: 123 VKPNPELILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHE 182
           + P+P LIL TLN S +AGRTVLGF +WL SNP F H+DETIS+FVDYFGRRKDF +IHE
Sbjct: 127 ITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHE 186

Query: 183 VLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCEN 242
           VL  G   +GAKTL S IDR  RAGR T+++SFF+ ME +YGF+RD+ES+ MVV KLCE+
Sbjct: 187 VLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEH 246

Query: 243 GYASHAEKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYN 302
           G+ASHAEK+VK++A+E FP+E ICD LIKGWCV+ KLDEA+RLA EM+RGGFE+GT AYN
Sbjct: 247 GFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYN 306

Query: 303 ALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNL 362
           ++LDC+CKLCRKKDPF+L+SEAE+ILV+MD  GVPRNVETFNVLI NLCKIRKT DA+ L
Sbjct: 307 SILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKL 366

Query: 363 FHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKIL 422
           F+RMGEWGC+PN  TFL+L +SLYQAAR GEGDEMIDRM+SAG+ +ALDKKAYYEF+KIL
Sbjct: 367 FYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKIL 426

Query: 423 CGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTP 482
           CGIERIDHA+ +F+KMK+DGC+PGIKTYDLLMGKLCAH RLD+AN+LF+EA  RGVPV  
Sbjct: 427 CGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGVPVES 486

Query: 483 KAYQVEPRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 530
           KAY+++PR+ KKP V K EKKRETLPEKMARKRRRL++IRLSFVKKPK+ MRRAF
Sbjct: 487 KAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKR-MRRAF 532

[Close]
BLAST of CmaCh11G002170 vs. NCBI nr
Match: gi|590668867|ref|XP_007037613.1| (Pentatricopeptide repeat-containing protein, putative [Theobroma cacao])

HSP 1 Score: 688.7 bits (1776), Expect = 7.9e-195
Identity = 325/444 (73.20%), Postives = 386/444 (86.94%), Query Frame = 1 

Query: 83  DQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPELILNTLNFSSEAGRTVLGFNEW 142
           D  +QSL+ E+LK+PDLDPLPIT+RLQL FSH+KP   LI  TLN S EAGRTVLGFN+W
Sbjct: 49  DPIAQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDW 108

Query: 143 LISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGSGISGAKTLRSTIDRFARAGRPT 202
           L+S+P+F+HTDET+S+F+DYFGRRKDF + H++L     ++G KT  S++DR  RAGRP 
Sbjct: 109 LLSDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKSVAGPKTFESSVDRLVRAGRPA 168

Query: 203 KLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDTLI 262
           ++L FFE M K+YGFKRDKES+R++VEKLCENGYAS+AEKMVK+ A+E FPDE ICD LI
Sbjct: 169 QVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSANEIFPDEMICDLLI 228

Query: 263 KGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVE 322
           KGWCV+ KL+EAKRLAGEMYRGGFE+GT AYNA+LDCVCKLCRKKDPF+L SEAE++L++
Sbjct: 229 KGWCVDGKLEEAKRLAGEMYRGGFEIGTMAYNAMLDCVCKLCRKKDPFRLHSEAEKVLLD 288

Query: 323 MDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAAR 382
           MD  GVPRNVETFNVL+NNLCKIRKT DA+ LF+RMGEWGC+P+AE++LILI+SLYQAAR
Sbjct: 289 MDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYRMGEWGCYPDAESYLILIRSLYQAAR 348

Query: 383 TGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTY 442
             EGDEMIDRM+SAG+ D L +K YY FLKILCG+ER++HA+IVF KMK DGC+PGIKTY
Sbjct: 349 VAEGDEMIDRMKSAGFGDKLGEKEYYSFLKILCGVERVEHAIIVFKKMKADGCKPGIKTY 408

Query: 443 DLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEK 502
           DLLMGK C HNRLDRAN+L+NEA + GVPV PK Y+V+PRY KK K  K EKKRETLPEK
Sbjct: 409 DLLMGKWCGHNRLDRANALYNEAVENGVPVEPKPYRVDPRYMKKTKAVKEEKKRETLPEK 468

Query: 503 MARKRRRLKQIRLSFVKKPKKTMR 527
           MARKRRRLKQIRLSFVKKPK+TMR
Sbjct: 469 MARKRRRLKQIRLSFVKKPKRTMR 492

The following BLAST results are available for this feature:
BLAST of CmaCh11G002170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP438_ARATH4.3e-17760.71Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... [more]
PP439_ARATH1.1e-3122.06Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
PP275_ARATH3.6e-3025.54Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN... [more]
PP294_ARATH4.8e-2723.02Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
PP293_ARATH6.3e-2723.28Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh11G002170 vs. TrEMBL
Match NameE-valueIdentityDescription
D7SIL7_VITVI2.6e-19766.92Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05090 PE=4 SV=... [more]
A0A061G509_THECC5.5e-19573.20Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
A0A0D2T3P6_GOSRA2.8e-19165.15Uncharacterized protein OS=Gossypium raimondii GN=B456_008G199900 PE=4 SV=1[more]
A0A151U5C5_CAJCA7.2e-18766.22Uncharacterized protein OS=Cajanus cajan GN=KK1_007157 PE=4 SV=1[more]
A0A059A5E5_EUCGR9.4e-18771.81Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02538 PE=4 SV=1[more]
BLAST of CmaCh11G002170 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60960.12.4e-17860.71 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G61370.16.3e-3322.06 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G49730.12.0e-3125.54 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G62540.12.7e-2823.02 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62470.13.6e-2823.28 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh11G002170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659106304|ref|XP_008453300.1|1.4e-26386.01PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu... [more]
gi|449440893|ref|XP_004138218.1|5.0e-25884.31PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu... [more]
gi|645269649|ref|XP_008240094.1|5.8e-19866.42PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Prun... [more]
gi|731426036|ref|XP_010663464.1|3.8e-19766.92PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Viti... [more]
gi|590668867|ref|XP_007037613.1|7.9e-19573.20Pentatricopeptide repeat-containing protein, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009640 photomorphogenesis
biological_process GO:0000338 protein deneddylation
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G002170.1CmaCh11G002170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 260..285
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 331..377
score: 1.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 421..447
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 334..367
score: 3.1E-8coord: 441..472
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 254..288
score: 9.372coord: 289..323
score: 5.678coord: 184..214
score: 6.621coord: 331..365
score: 11.926coord: 403..437
score: 9.449coord: 366..400
score: 8.024coord: 438..472
score: 9.24coord: 220..250
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 2..22
score: 1.1E-222coord: 80..471
score: 1.1E
NoneNo IPR availablePANTHERPTHR24015:SF831PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIALcoord: 80..471
score: 1.1E-222coord: 2..22
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh11G002170Cucsa.198680Cucumber (Gy14) v1cgycmaB0579
CmaCh11G002170Cla019045Watermelon (97103) v1cmawmB143
CmaCh11G002170Csa1G015720Cucumber (Chinese Long) v2cmacuB101
CmaCh11G002170MELO3C017241Melon (DHL92) v3.5.1cmameB120
CmaCh11G002170ClCG06G015530Watermelon (Charleston Gray)cmawcgB135
CmaCh11G002170CSPI01G03390Wild cucumber (PI 183967)cmacpiB101
CmaCh11G002170CmoCh11G002190Cucurbita moschata (Rifu)cmacmoB112
CmaCh11G002170CmoCh10G003090Cucurbita moschata (Rifu)cmacmoB106
CmaCh11G002170Lsi06G014030Bottle gourd (USVL1VR-Ls)cmalsiB143
CmaCh11G002170Cp4.1LG04g14650Cucurbita pepo (Zucchini)cmacpeB153
CmaCh11G002170MELO3C017241.2Melon (DHL92) v3.6.1cmamedB128
CmaCh11G002170CsaV3_1G003420Cucumber (Chinese Long) v3cmacucB0115
CmaCh11G002170Cla97C06G125060Watermelon (97103) v2cmawmbB139
CmaCh11G002170Bhi02G000052Wax gourdcmawgoB0168
CmaCh11G002170CsGy1G003370Cucumber (Gy14) v2cgybcmaB043
CmaCh11G002170Carg09193Silver-seed gourdcarcmaB0830
CmaCh11G002170Carg17871Silver-seed gourdcarcmaB0641
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh11G002170CmaCh10G002900Cucurbita maxima (Rimu)cmacmaB080
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G002170Cucurbita maxima (Rimu)cmacmaB127
CmaCh11G002170Cucurbita maxima (Rimu)cmacmaB139
CmaCh11G002170Cucumber (Gy14) v1cgycmaB0260
CmaCh11G002170Cucumber (Gy14) v1cgycmaB0577
CmaCh11G002170Cucumber (Gy14) v1cgycmaB0790
CmaCh11G002170Cucurbita moschata (Rifu)cmacmoB125
CmaCh11G002170Cucurbita moschata (Rifu)cmacmoB136
CmaCh11G002170Cucurbita moschata (Rifu)cmacmoB139
CmaCh11G002170Wild cucumber (PI 183967)cmacpiB086
CmaCh11G002170Wild cucumber (PI 183967)cmacpiB087
CmaCh11G002170Wild cucumber (PI 183967)cmacpiB133
CmaCh11G002170Cucumber (Chinese Long) v2cmacuB087
CmaCh11G002170Cucumber (Chinese Long) v2cmacuB088
CmaCh11G002170Cucumber (Chinese Long) v2cmacuB136
CmaCh11G002170Melon (DHL92) v3.5.1cmameB083
CmaCh11G002170Melon (DHL92) v3.5.1cmameB090
CmaCh11G002170Watermelon (Charleston Gray)cmawcgB119
CmaCh11G002170Watermelon (Charleston Gray)cmawcgB124
CmaCh11G002170Watermelon (97103) v1cmawmB112
CmaCh11G002170Watermelon (97103) v1cmawmB120
CmaCh11G002170Cucurbita pepo (Zucchini)cmacpeB105
CmaCh11G002170Cucurbita pepo (Zucchini)cmacpeB106
CmaCh11G002170Cucurbita pepo (Zucchini)cmacpeB128
CmaCh11G002170Cucurbita pepo (Zucchini)cmacpeB139
CmaCh11G002170Bottle gourd (USVL1VR-Ls)cmalsiB106
CmaCh11G002170Bottle gourd (USVL1VR-Ls)cmalsiB123
CmaCh11G002170Cucumber (Gy14) v2cgybcmaB029
CmaCh11G002170Cucumber (Gy14) v2cgybcmaB030
CmaCh11G002170Cucumber (Gy14) v2cgybcmaB585
CmaCh11G002170Melon (DHL92) v3.6.1cmamedB090
CmaCh11G002170Melon (DHL92) v3.6.1cmamedB098
CmaCh11G002170Silver-seed gourdcarcmaB0538
CmaCh11G002170Silver-seed gourdcarcmaB0720
CmaCh11G002170Cucumber (Chinese Long) v3cmacucB0101
CmaCh11G002170Cucumber (Chinese Long) v3cmacucB0102
CmaCh11G002170Cucumber (Chinese Long) v3cmacucB0155
CmaCh11G002170Watermelon (97103) v2cmawmbB122
CmaCh11G002170Wax gourdcmawgoB0138
CmaCh11G002170Wax gourdcmawgoB0143