Cp4.1LG20g03880 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g03880
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCp4.1LG20 : 2174342 .. 2175013 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACTCCCACCCAATTGGCGGAGACCAACACGCCAGAGCAGCGTCCAATCAAGCGCCACCACACGCCGCGCTATTACGCACAGCGTGTCAAGGACAGCCTAACCACGCGCGTCTCCAAGCTCATATGCGCCGTCTTCTTGGGCTTGTTGTTCATTGTGGGTATCATAATGTTTATATTGTGGCTTAGTTTACGACCCCACCGGCCCCGATTTTTCATTCACCATTTTTCAATTTTGGGTTTGGGCCTCGATAACGGCTACAAAAATCCCGAAATTGTCTTCAACGTCACGGCCCGAAACTCCAACCTTAACATTGGGATCTACTACGATTCCATGGTCGGTTCGGTTTATTATAAGAACCAGAAAATCGGGTCCACGCCGCTGCTGGATGAGTATTATGAAGGCCCCAAGACTACCAAGGTGCTGACGGCGGCGCTTAGTGGAGAGACGTTGAACGTCGATAGGCATCGGTGGATGGAGTTTAGTAAAGAGCGGTCTAAGGGAGCCGTCGGTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTTAGAATATCCGCTTGGGATAGTAAGCGCCATGGTATGCACGCTAATTGTGACGTGTCGGTGGGCCGTGATGGGTTGGTTTTGCCTTCTTCCAAGGACGTGAGATGCCCGGTCTACTTTTCATGA

mRNA sequence

ATGAACACTCCCACCCAATTGGCGGAGACCAACACGCCAGAGCAGCGTCCAATCAAGCGCCACCACACGCCGCGCTATTACGCACAGCGTGTCAAGGACAGCCTAACCACGCGCGTCTCCAAGCTCATATGCGCCGTCTTCTTGGGCTTGTTGTTCATTGTGGGTATCATAATGTTTATATTGTGGCTTAGTTTACGACCCCACCGGCCCCGATTTTTCATTCACCATTTTTCAATTTTGGGTTTGGGCCTCGATAACGGCTACAAAAATCCCGAAATTGTCTTCAACGTCACGGCCCGAAACTCCAACCTTAACATTGGGATCTACTACGATTCCATGGTCGGTTCGGTTTATTATAAGAACCAGAAAATCGGGTCCACGCCGCTGCTGGATGAGTATTATGAAGGCCCCAAGACTACCAAGGTGCTGACGGCGGCGCTTAGTGGAGAGACGTTGAACGTCGATAGGCATCGGTGGATGGAGTTTAGTAAAGAGCGGTCTAAGGGAGCCGTCGGTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTTAGAATATCCGCTTGGGATAGTAAGCGCCATGGTATGCACGCTAATTGTGACGTGTCGGTGGGCCGTGATGGGTTGGTTTTGCCTTCTTCCAAGGACGTGAGATGCCCGGTCTACTTTTCATGA

Coding sequence (CDS)

ATGAACACTCCCACCCAATTGGCGGAGACCAACACGCCAGAGCAGCGTCCAATCAAGCGCCACCACACGCCGCGCTATTACGCACAGCGTGTCAAGGACAGCCTAACCACGCGCGTCTCCAAGCTCATATGCGCCGTCTTCTTGGGCTTGTTGTTCATTGTGGGTATCATAATGTTTATATTGTGGCTTAGTTTACGACCCCACCGGCCCCGATTTTTCATTCACCATTTTTCAATTTTGGGTTTGGGCCTCGATAACGGCTACAAAAATCCCGAAATTGTCTTCAACGTCACGGCCCGAAACTCCAACCTTAACATTGGGATCTACTACGATTCCATGGTCGGTTCGGTTTATTATAAGAACCAGAAAATCGGGTCCACGCCGCTGCTGGATGAGTATTATGAAGGCCCCAAGACTACCAAGGTGCTGACGGCGGCGCTTAGTGGAGAGACGTTGAACGTCGATAGGCATCGGTGGATGGAGTTTAGTAAAGAGCGGTCTAAGGGAGCCGTCGGTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTTAGAATATCCGCTTGGGATAGTAAGCGCCATGGTATGCACGCTAATTGTGACGTGTCGGTGGGCCGTGATGGGTTGGTTTTGCCTTCTTCCAAGGACGTGAGATGCCCGGTCTACTTTTCATGA

Protein sequence

MNTPTQLAETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFILWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTIRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS
Homology
[Close]
BLAST of Cp4.1LG20g03880 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.3e-13
Identity = 39/162 (24.07%), Postives = 76/162 (46.91%), Query Frame = 1 

Query: 43  ICAVFLGLLFIVGIIMFILWLSLRPHRPRFFIHHFSILGLGLDN-GYKNPEIVFNVTARN 102
           IC V +G + IV I +F++W+ L+P +PRF +   ++    L             + +RN
Sbjct: 21  ICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRN 80

Query: 103 SNLNIGIYYDSMVGSVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWME 162
            N  IGIYYD +     Y+NQ+I     +   Y+G K   V +  + G ++ +     + 
Sbjct: 81  RNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVA 140

Query: 163 FSKERSKGAVGFRLEISSTIRFRISAWDSKRHGMHANCDVSV 204
              E+++G V   +     +R+++    + ++ +H  C   +
Sbjct: 141 LGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

[Close]
BLAST of Cp4.1LG20g03880 vs. Swiss-Prot
Match: NDR1_ARATH (Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-12
Identity = 53/174 (30.46%), Postives = 81/174 (46.55%), Query Frame = 1 

Query: 44  CAVFLGLLFIVGIIMFILWLSLRPHRPRFFIHHFSILGLGLD-NGYKNPEIVFNVTARNS 103
           C   L  +F  G+    LWLSLR  +P+  I +F I  LG D N   N  + F V   N 
Sbjct: 15  CTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDNP 74

Query: 104 NLNIGIYYDSM-VGSVYYKNQKIGSTPLL-------DEYYEGPKTTKVLTAALSGETLNV 163
           N + GIYYD + +        KI S+ L+        ++Y+G K      A   G+   +
Sbjct: 75  NKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKK----AKKWGQVKPL 134

Query: 164 DRHRWMEFSKERSKGAVGFRLEISSTIRFRISAWDSKRHGMHANCDVSVGRDGL 209
           +    +        G+  FRL++ + +RF+I  W +KR+G+    DV V  DG+
Sbjct: 135 NNQTVLR--AVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGV 182

[Close]
BLAST of Cp4.1LG20g03880 vs. Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.1e-08
Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 1 

Query: 96  NVTARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVD 155
           N++ RNS  +IGI+YD    +VYY NQ++G+ P +  +Y G K T +L A   G+TL + 
Sbjct: 34  NLSIRNSKSSIGIHYDRFEATVYYMNQRLGAVP-MPLFYLGSKNTMLLRALFEGQTLVLL 93

Query: 156 RHRWMEFSKERSKGAVGFRLEISSTIRFRI 186
           +    +  ++  K  V +R+++  +I FR+
Sbjct: 94  KGNERKKFEDDQKTGV-YRIDVKLSINFRV 121

[Close]
BLAST of Cp4.1LG20g03880 vs. TrEMBL
Match: A0A0A0LUA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064760 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.6e-95
Identity = 175/228 (76.75%), Postives = 196/228 (85.96%), Query Frame = 1 

Query: 1   MNTPTQLA--ETNTPEQRPI---KRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVG 60
           MN+P+ L    T+TPEQ P    KRHH+ RYYA RVK+SLTTRVSKLICA+FL LL I+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IIMFILWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVG 120
           II FILWLSLRPHRPRFFIH F++ GL L+NG+++ +IVFN TARNSNLNIGIYYD+M G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRL 180
           SVYYK QKIGSTPLLD YYEGPKTTKVLTAALSG TLN+DR RWME S ERSKG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EISSTIRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           EI+STIRFRISAWDSKRH MHANC VSVG DG++LPSSKD+RCPVYF+
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

[Close]
BLAST of Cp4.1LG20g03880 vs. TrEMBL
Match: V4TPA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017613mg PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 139/223 (62.33%), Postives = 177/223 (79.37%), Query Frame = 1 

Query: 1   MNTPTQLAETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFI 60
           M++  +L   +TP+ +PIKRH+T RYYA RV++SLTTRVSK +C +FL LL + GII+F+
Sbjct: 1   MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFV 60

Query: 61  LWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYK 120
           L+LSLRPHRPR FIH FSI  L   NG++N EI+FNVTARNSN ++GIY+DS+ GSVYYK
Sbjct: 61  LYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYK 120

Query: 121 NQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISST 180
           NQ++G+TPL D +++ PKTT +L A LSG TL V+  RWMEF  +R +G VGFRLEI ST
Sbjct: 121 NQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSGRWMEFMHDRGQGKVGFRLEIKST 180

Query: 181 IRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           IRF++S WDSKRH MHA CDV VG DG +LP+ KD RCP+YF+
Sbjct: 181 IRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223

[Close]
BLAST of Cp4.1LG20g03880 vs. TrEMBL
Match: W9QEY6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014826 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.7e-78
Identity = 140/212 (66.04%), Postives = 171/212 (80.66%), Query Frame = 1 

Query: 13  PEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFILWLSLRPHRPRF 72
           PE RP+KRHHTPRYYA RVK+SLTTRVSK+ICA+FLGLLFIVG I FILWLSLRPHRPRF
Sbjct: 16  PESRPLKRHHTPRYYAHRVKESLTTRVSKMICAIFLGLLFIVGFITFILWLSLRPHRPRF 75

Query: 73  FIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDE 132
            IH FS+ GLG ++G++N +I  N +ARN N NIGI YDSM GSVYY++QKIG+ PL+ E
Sbjct: 76  HIHEFSVPGLGQESGFENAQITVNASARNPNQNIGIRYDSMEGSVYYRDQKIGTKPLMHE 135

Query: 133 -YYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTIRFRISAWDSK 192
            + + PK T V+    SG TL V   RWMEF+ +R++G V FRLE++S IRFR+S+W+SK
Sbjct: 136 PFSQEPKNTTVIDGTFSGATLTVSSQRWMEFTNDRARGMVVFRLELTSMIRFRVSSWESK 195

Query: 193 RHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           RH MHANCDV VG DGL+LP SK+ +CPVYF+
Sbjct: 196 RHRMHANCDVDVGPDGLILPGSKNRKCPVYFA 227

[Close]
BLAST of Cp4.1LG20g03880 vs. TrEMBL
Match: M5WM48_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015351mg PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.8e-76
Identity = 141/224 (62.95%), Postives = 176/224 (78.57%), Query Frame = 1 

Query: 2   NTPTQLA-ETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFI 61
           N+P +L  +  TPE + +KR HTPRYYA RV++SLTTRVSKL C +FLGLL I+G+I FI
Sbjct: 3   NSPDRLPIQYPTPEPQRMKRQHTPRYYAHRVRESLTTRVSKLFCTIFLGLLLILGMIAFI 62

Query: 62  LWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYK 121
           LWLSLRPHRPRF IH F++ GL  + G++N +I FN TARN+N +IGIYYDSM GS YYK
Sbjct: 63  LWLSLRPHRPRFHIHAFTVPGLNQETGFENAQITFNATARNANHDIGIYYDSMDGSAYYK 122

Query: 122 NQKIGS-TPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISS 181
           +Q+IGS + LL  +Y+GPK T ++  + +G TL V+  RWMEF  +RS+G V FRLE S+
Sbjct: 123 DQRIGSISGLLPPFYQGPKNTTIVAGSFTGATLTVNSQRWMEFINDRSRGTVVFRLEFSA 182

Query: 182 TIRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           TIRFRI +WDSKRH MHANCDV VG+DGL+LP SKD RCPVYF+
Sbjct: 183 TIRFRIQSWDSKRHRMHANCDVDVGQDGLILPVSKDRRCPVYFT 226

[Close]
BLAST of Cp4.1LG20g03880 vs. TrEMBL
Match: A0A061GGB2_THECC (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Theobroma cacao GN=TCM_030152 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.5e-73
Identity = 128/211 (60.66%), Postives = 167/211 (79.15%), Query Frame = 1 

Query: 13  PEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFILWLSLRPHRPRF 72
           P+ +P+KR+HT + YA+RV+DS TTRV+K +CA+FL LL  VGI+MFILWLSLRPHRPRF
Sbjct: 20  PQPQPMKRNHTAQRYARRVRDSFTTRVTKTLCAIFLSLLLCVGIVMFILWLSLRPHRPRF 79

Query: 73  FIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDE 132
            I  F++ GL   +G++N +I FNVTARN N +IGIYYDSMVGS+YYK+Q+IGSTPLLD 
Sbjct: 80  HIMEFTVPGLAQPSGFENAQITFNVTARNPNQHIGIYYDSMVGSIYYKDQRIGSTPLLDP 139

Query: 133 YYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTIRFRISAWDSKR 192
           +++ PKTT ++       TL V+ +RW EF  +R +G V FRL+I+S IRF++S WDSK 
Sbjct: 140 FFQEPKTTTIVYRTFDTATLTVNSNRWKEFMDDRQQGMVVFRLDITSVIRFKVSTWDSKH 199

Query: 193 HGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           H MH NCDV+VG DG++LP+SKD +CPVYFS
Sbjct: 200 HKMHVNCDVAVGPDGMILPTSKDKKCPVYFS 230

[Close]
BLAST of Cp4.1LG20g03880 vs. TAIR10
Match: AT4G05220.1 (AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 258.1 bits (658), Expect = 5.1e-69
Identity = 118/221 (53.39%), Postives = 160/221 (72.40%), Query Frame = 1 

Query: 3   TPTQLAETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFILW 62
           T   +  +  P  +P+KRHH+  YYA RV++SL+TR+SK ICA+FL +LF VG+I FILW
Sbjct: 6   TTIPIRTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILW 65

Query: 63  LSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYKNQ 122
           LSLRPHRPRF I  F + GL    G +N  I FNVT  N N ++G+Y+DSM GS+YYK+Q
Sbjct: 66  LSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQ 125

Query: 123 KIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTIR 182
           ++G  PLL+ +++ P  T ++T  L+G +L V+ +RW EFS +R++G VGFRL+I STIR
Sbjct: 126 RVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIR 185

Query: 183 FRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           F++  W SK H MHANC++ VGRDGL+LP     RCPVYF+
Sbjct: 186 FKLHRWISKHHRMHANCNIVVGRDGLILPKFNHKRCPVYFT 226

[Close]
BLAST of Cp4.1LG20g03880 vs. TAIR10
Match: AT1G61760.1 (AT1G61760.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 240.7 bits (613), Expect = 8.4e-64
Identity = 114/222 (51.35%), Postives = 153/222 (68.92%), Query Frame = 1 

Query: 2   NTPTQLAETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFIL 61
           N    L   + P  RPI RHH+      RVK+SLTTRVSKLICA+FL LL  +GII FIL
Sbjct: 3   NKVDSLPVRSNPSTRPISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGIITFIL 62

Query: 62  WLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYKN 121
           W+SL+PHRPR  I  FSI GL   +G++   I F +TA N N N+GIYYDSM GSVYYK 
Sbjct: 63  WISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYYKE 122

Query: 122 QKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTI 181
           ++IGST L + +Y+ PK T  +  ALS   + V++ RWME  ++R++G + FRL++ S I
Sbjct: 123 KRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRSMI 182

Query: 182 RFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           RF++  W SK H M+A+C + +G DG++L ++KD RCPVYF+
Sbjct: 183 RFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDKRCPVYFT 224

[Close]
BLAST of Cp4.1LG20g03880 vs. TAIR10
Match: AT5G53730.1 (AT5G53730.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 85.1 bits (209), Expect = 5.9e-17
Identity = 53/183 (28.96%), Postives = 89/183 (48.63%), Query Frame = 1 

Query: 23  TPRYYAQRVKDSLTTRVSKLI---CAVFLGLLFIVGIIMFILWLSLRPHRPRFFIHHFSI 82
           +P++ A++   ++  R  KL       F GLL I+    F++WL L P RP F +    I
Sbjct: 8   SPKHCAKKGGININNRHKKLFFTFSTFFSGLLLII----FLVWLILHPERPEFSLTEADI 67

Query: 83  LGLGLDNGYK---NPEIVFNVTARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDEYYEG 142
             L L        N  +   + ++N N  +GIYYD ++    Y+ Q+I S   L  +Y+ 
Sbjct: 68  YSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQS 127

Query: 143 PKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTIRFRISAWDSKRHGMH 200
            +   +LTA L G  L V +    + S+ERS G +   +++   +R++I  W S  +  +
Sbjct: 128 HEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFN 186

[Close]
BLAST of Cp4.1LG20g03880 vs. TAIR10
Match: AT4G01410.1 (AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15
Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 1 

Query: 41  KLICAVFLGLLFIVGIIMFILWLSLRPHRPRFFIHHFSILGLGL-DNGYKNPEIV----- 100
           + IC     +L I+GII  ILWL  RPH+PR      +++G  + D  +  P ++     
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPR-----LTVVGAAIYDLNFTAPPLISTSVQ 101

Query: 101 FNVTARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNV 160
           F+V ARN N  + I+YD +   V YK+Q I     L     G K+T V+   + G  + V
Sbjct: 102 FSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPV 161

Query: 161 DRHRWMEFSKERSKGAVGFRLEISSTIRFRISAWDSKRHGMHANCDV-------SVGRDG 214
                     + + G V  R+ I   +R++  A  + R+G +A CDV       S G+  
Sbjct: 162 SPEVANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVP 221

[Close]
BLAST of Cp4.1LG20g03880 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-15
Identity = 41/166 (24.70%), Postives = 78/166 (46.99%), Query Frame = 1 

Query: 39  VSKLICAVFLGLLFIVGIIMFILWLSLRPHRPRFFIHHFSILGLGLDN-GYKNPEIVFNV 98
           V + +CA  +  + IV I +F++W+ LRP +PRF +   ++    L             +
Sbjct: 15  VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTI 74

Query: 99  TARNSNLNIGIYYDSMVGSVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRH 158
            +RN N  IGIYYD +     Y NQ+I     +   Y+G K   V +  + G  + +  +
Sbjct: 75  ASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPY 134

Query: 159 RWMEFSKERSKGAVGFRLEISSTIRFRISAWDSKRHGMHANCDVSV 204
             +   +E+ +G VG  +    T+R+++    + ++ +H  C   +
Sbjct: 135 NSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFI 180

[Close]
BLAST of Cp4.1LG20g03880 vs. NCBI nr
Match: gi|659067831|ref|XP_008441513.1| (PREDICTED: protein NDR1 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 3.8e-98
Identity = 180/228 (78.95%), Postives = 198/228 (86.84%), Query Frame = 1 

Query: 1   MNTPTQLA--ETNTPEQRPI---KRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVG 60
           MN+P+ L    T+TPEQRP    K HH+ RYYA RVK+SLTTRVSKLICA+FL LL I+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IIMFILWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVG 120
           II FILWLSLRPHRPRFFIH FS+ G GLDNG++N +IVFN TARNSNLNIGIYYD+M G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRL 180
           SVYYK+QKIGSTPLLD YYEGPKTTKVLTAALSG TLNVDR +WME S ERSKG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EISSTIRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           EI+STIRFRISAWDSKRHGMHANC VSVG DG++LPSSKDVRCPVYF+
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

[Close]
BLAST of Cp4.1LG20g03880 vs. NCBI nr
Match: gi|449471964|ref|XP_004153455.1| (PREDICTED: protein NDR1 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 2.3e-95
Identity = 175/228 (76.75%), Postives = 196/228 (85.96%), Query Frame = 1 

Query: 1   MNTPTQLA--ETNTPEQRPI---KRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVG 60
           MN+P+ L    T+TPEQ P    KRHH+ RYYA RVK+SLTTRVSKLICA+FL LL I+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IIMFILWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVG 120
           II FILWLSLRPHRPRFFIH F++ GL L+NG+++ +IVFN TARNSNLNIGIYYD+M G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYKNQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRL 180
           SVYYK QKIGSTPLLD YYEGPKTTKVLTAALSG TLN+DR RWME S ERSKG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EISSTIRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           EI+STIRFRISAWDSKRH MHANC VSVG DG++LPSSKD+RCPVYF+
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

[Close]
BLAST of Cp4.1LG20g03880 vs. NCBI nr
Match: gi|568827235|ref|XP_006467970.1| (PREDICTED: protein NDR1-like [Citrus sinensis])

HSP 1 Score: 301.2 bits (770), Expect = 1.5e-78
Identity = 139/223 (62.33%), Postives = 177/223 (79.37%), Query Frame = 1 

Query: 1   MNTPTQLAETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFI 60
           M++  +L   +TP+ +PIKRH+T RYYA RV++SLTTRVSK +C +FL LL + GII+F+
Sbjct: 1   MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFV 60

Query: 61  LWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYK 120
           L+LSLRPHRPR FIH FSI  L   NG++N EI+FNVTARNSN ++GIY+DS+ GSVYYK
Sbjct: 61  LYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYK 120

Query: 121 NQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISST 180
           NQ++G+TPL D +++ PKTT +L A LSG TL V+  RWMEF  +R +G VGFRLEI ST
Sbjct: 121 NQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKST 180

Query: 181 IRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           IRF++S WDSKRH MHA CDV VG DG +LP+ KD RCP+YF+
Sbjct: 181 IRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223

[Close]
BLAST of Cp4.1LG20g03880 vs. NCBI nr
Match: gi|567913589|ref|XP_006449108.1| (hypothetical protein CICLE_v10017613mg [Citrus clementina])

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-78
Identity = 139/223 (62.33%), Postives = 177/223 (79.37%), Query Frame = 1 

Query: 1   MNTPTQLAETNTPEQRPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFI 60
           M++  +L   +TP+ +PIKRH+T RYYA RV++SLTTRVSK +C +FL LL + GII+F+
Sbjct: 1   MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFV 60

Query: 61  LWLSLRPHRPRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYK 120
           L+LSLRPHRPR FIH FSI  L   NG++N EI+FNVTARNSN ++GIY+DS+ GSVYYK
Sbjct: 61  LYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYK 120

Query: 121 NQKIGSTPLLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISST 180
           NQ++G+TPL D +++ PKTT +L A LSG TL V+  RWMEF  +R +G VGFRLEI ST
Sbjct: 121 NQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSGRWMEFMHDRGQGKVGFRLEIKST 180

Query: 181 IRFRISAWDSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           IRF++S WDSKRH MHA CDV VG DG +LP+ KD RCP+YF+
Sbjct: 181 IRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223

[Close]
BLAST of Cp4.1LG20g03880 vs. NCBI nr
Match: gi|694446527|ref|XP_009349601.1| (PREDICTED: protein YLS9-like [Pyrus x bretschneideri])

HSP 1 Score: 299.3 bits (765), Expect = 5.7e-78
Identity = 144/215 (66.98%), Postives = 173/215 (80.47%), Query Frame = 1 

Query: 11  NTPEQ-RPIKRHHTPRYYAQRVKDSLTTRVSKLICAVFLGLLFIVGIIMFILWLSLRPHR 70
           +TPEQ RP+KR HT RYYA RV++SLTTRVSKLIC +FL LL I+G+I FILWLSLRPHR
Sbjct: 12  STPEQQRPMKRQHTTRYYAHRVRESLTTRVSKLICTIFLSLLLILGMITFILWLSLRPHR 71

Query: 71  PRFFIHHFSILGLGLDNGYKNPEIVFNVTARNSNLNIGIYYDSMVGSVYYKNQKIGS-TP 130
           PRF IH FS+ GLG + G+ N EI+FN TARN+N NIGIYYDSM  +VYYK+Q+IGS T 
Sbjct: 72  PRFHIHAFSVPGLGQETGFANAEIMFNATARNANHNIGIYYDSMDATVYYKDQRIGSITG 131

Query: 131 LLDEYYEGPKTTKVLTAALSGETLNVDRHRWMEFSKERSKGAVGFRLEISSTIRFRISAW 190
           LLD +Y+GPK T ++  +  G TL V+  RWMEF+ +R KG V FRLE ++TIRFRI AW
Sbjct: 132 LLDPFYQGPKNTTIVMGSFQGATLTVNNQRWMEFTNDRKKGTVVFRLEFTATIRFRIHAW 191

Query: 191 DSKRHGMHANCDVSVGRDGLVLPSSKDVRCPVYFS 224
           DS+RH MHANCDV VG+DGL+LP SKD RCPVYF+
Sbjct: 192 DSRRHRMHANCDVDVGQDGLILPISKDRRCPVYFT 226

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g03880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NHL12_ARATH8.3e-1324.07NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
NDR1_ARATH3.2e-1230.46Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1[more]
SYP24_ARATH8.1e-0834.44Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1[more]
BLAST of Cp4.1LG20g03880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUA7_CUCSA1.6e-9576.75Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064760 PE=4 SV=1[more]
V4TPA5_9ROSI1.4e-7862.33Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017613mg PE=4 SV=1[more]
W9QEY6_9ROSA6.7e-7866.04Uncharacterized protein OS=Morus notabilis GN=L484_014826 PE=4 SV=1[more]
M5WM48_PRUPE2.8e-7662.95Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015351mg PE=4 SV=1[more]
A0A061GGB2_THECC8.5e-7360.66Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=The... [more]
BLAST of Cp4.1LG20g03880 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G05220.15.1e-6953.39 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT1G61760.18.4e-6451.35 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G53730.15.9e-1728.96 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT4G01410.11.5e-1530.65 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52470.14.2e-1524.70 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
BLAST of Cp4.1LG20g03880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067831|ref|XP_008441513.1|3.8e-9878.95PREDICTED: protein NDR1 [Cucumis melo][more]
gi|449471964|ref|XP_004153455.1|2.3e-9576.75PREDICTED: protein NDR1 [Cucumis sativus][more]
gi|568827235|ref|XP_006467970.1|1.5e-7862.33PREDICTED: protein NDR1-like [Citrus sinensis][more]
gi|567913589|ref|XP_006449108.1|1.9e-7862.33hypothetical protein CICLE_v10017613mg [Citrus clementina][more]
gi|694446527|ref|XP_009349601.1|5.7e-7866.98PREDICTED: protein YLS9-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g03880.1Cp4.1LG20g03880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 97..198
score: 1.
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 6..222
score: 2.0E
NoneNo IPR availablePANTHERPTHR31415:SF3LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 6..222
score: 2.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g03880Cucsa.086110Cucumber (Gy14) v1cgycpeB0159
Cp4.1LG20g03880CmaCh13G007120Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g03880CmaCh18G002360Cucurbita maxima (Rimu)cmacpeB442
Cp4.1LG20g03880CmoCh18G002950Cucurbita moschata (Rifu)cmocpeB403
Cp4.1LG20g03880CmoCh13G007380Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g03880Cla019408Watermelon (97103) v1cpewmB503
Cp4.1LG20g03880Csa1G064760Cucumber (Chinese Long) v2cpecuB506
Cp4.1LG20g03880MELO3C002486Melon (DHL92) v3.5.1cpemeB477
Cp4.1LG20g03880ClCG03G005010Watermelon (Charleston Gray)cpewcgB463
Cp4.1LG20g03880CSPI01G11010Wild cucumber (PI 183967)cpecpiB506
Cp4.1LG20g03880Lsi02G006330Bottle gourd (USVL1VR-Ls)cpelsiB417
Cp4.1LG20g03880MELO3C002486.2Melon (DHL92) v3.6.1cpemedB559
Cp4.1LG20g03880CsaV3_1G011090Cucumber (Chinese Long) v3cpecucB0624
Cp4.1LG20g03880Bhi08G001444Wax gourdcpewgoB0655
Cp4.1LG20g03880CsGy1G010910Cucumber (Gy14) v2cgybcpeB070
Cp4.1LG20g03880Carg07523Silver-seed gourdcarcpeB1401
Cp4.1LG20g03880Carg26535Silver-seed gourdcarcpeB1118
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g03880Cp4.1LG09g08860Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG20g03880Cp4.1LG06g08970Cucurbita pepo (Zucchini)cpecpeB445
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g03880Cucurbita pepo (Zucchini)cpecpeB086
Cp4.1LG20g03880Cucurbita pepo (Zucchini)cpecpeB412
Cp4.1LG20g03880Cucurbita pepo (Zucchini)cpecpeB437
Cp4.1LG20g03880Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g03880Cucumber (Gy14) v1cgycpeB0394
Cp4.1LG20g03880Cucurbita maxima (Rimu)cmacpeB533
Cp4.1LG20g03880Cucurbita maxima (Rimu)cmacpeB677
Cp4.1LG20g03880Cucurbita maxima (Rimu)cmacpeB881
Cp4.1LG20g03880Cucurbita moschata (Rifu)cmocpeB443
Cp4.1LG20g03880Cucurbita moschata (Rifu)cmocpeB631
Cp4.1LG20g03880Cucurbita moschata (Rifu)cmocpeB818
Cp4.1LG20g03880Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g03880Cucumber (Chinese Long) v2cpecuB525
Cp4.1LG20g03880Cucumber (Chinese Long) v2cpecuB526
Cp4.1LG20g03880Bottle gourd (USVL1VR-Ls)cpelsiB415
Cp4.1LG20g03880Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g03880Watermelon (97103) v1cpewmB513
Cp4.1LG20g03880Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g03880Melon (DHL92) v3.5.1cpemeB481
Cp4.1LG20g03880Melon (DHL92) v3.6.1cpemedB572
Cp4.1LG20g03880Silver-seed gourdcarcpeB0916
Cp4.1LG20g03880Silver-seed gourdcarcpeB1222
Cp4.1LG20g03880Silver-seed gourdcarcpeB1291
Cp4.1LG20g03880Cucumber (Chinese Long) v3cpecucB0650
Cp4.1LG20g03880Wax gourdcpewgoB0632
Cp4.1LG20g03880Wax gourdcpewgoB0637