Carg26535 (gene) Silver-seed gourd

NameCarg26535
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLate embryogenesis abundant protein
LocationCucurbita_argyrosperma_scaffold_315 : 98071 .. 98748 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAGCCCCAGCCAATTGCCAGTGCACCACACCAACACGCCCGAACACCGCCCAATCAAGCGCCACCACACAGCGCGCTACTACGTTCACCGTGTCAAGGAGAGCCTCACCACCCGCTTGTCCAAGCTCATATGCGCCATCTTCTTAAGCTTGTTGCTAATCGTGGGCATCATTACGTTTATTCTCTGGCTCAGTTTACGACCCCACCGGCCCAGGTTTTTTATCCACGACTTTTCGGTTCCCGGTTTGGGTTTGGAGACCGGGTTCGAGAATGCCCAGATTGCGTTCAATGTCACGGCTCGAAATTCGAATTTGAATATTGGGATCTACTACGGTTCGATTACCGGTTCGGTTTATTATAGAGACCAGAAAATTGGGTCGACGCCGTTGCTGGATTCGTATTATGAGGCGCCGAAGACTACTAAGGTGTTGGCGGCGGTGCTGAGCGGCGCGACGTTGAATATCAATAATGAACGGTGGATGGAGTTTAATAATGACCGGTCTAAAGGGACCGTGGCTTTCCGGTTGGAGATTACGTCCACTATCCGGTTTAGGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGATGATTTTGCCTTCTTCCAGGGATGTGAGATGCCCGGTTTATTTTACCTGA

mRNA sequence

ATGCATAGCCCCAGCCAATTGCCAGTGCACCACACCAACACGCCCGAACACCGCCCAATCAAGCGCCACCACACAGCGCGCTACTACGTTCACCGTGTCAAGGAGAGCCTCACCACCCGCTTGTCCAAGCTCATATGCGCCATCTTCTTAAGCTTGTTGCTAATCGTGGGCATCATTACGTTTATTCTCTGGCTCAGTTTACGACCCCACCGGCCCAGGTTTTTTATCCACGACTTTTCGGTTCCCGGTTTGGGTTTGGAGACCGGGTTCGAGAATGCCCAGATTGCGTTCAATGTCACGGCTCGAAATTCGAATTTGAATATTGGGATCTACTACGGTTCGATTACCGGTTCGGTTTATTATAGAGACCAGAAAATTGGGTCGACGCCGTTGCTGGATTCGTATTATGAGGCGCCGAAGACTACTAAGGTGTTGGCGGCGGTGCTGAGCGGCGCGACGTTGAATATCAATAATGAACGGTGGATGGAGTTTAATAATGACCGGTCTAAAGGGACCGTGGCTTTCCGGTTGGAGATTACGTCCACTATCCGGTTTAGGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGATGATTTTGCCTTCTTCCAGGGATGTGAGATGCCCGGTTTATTTTACCTGA

Coding sequence (CDS)

ATGCATAGCCCCAGCCAATTGCCAGTGCACCACACCAACACGCCCGAACACCGCCCAATCAAGCGCCACCACACAGCGCGCTACTACGTTCACCGTGTCAAGGAGAGCCTCACCACCCGCTTGTCCAAGCTCATATGCGCCATCTTCTTAAGCTTGTTGCTAATCGTGGGCATCATTACGTTTATTCTCTGGCTCAGTTTACGACCCCACCGGCCCAGGTTTTTTATCCACGACTTTTCGGTTCCCGGTTTGGGTTTGGAGACCGGGTTCGAGAATGCCCAGATTGCGTTCAATGTCACGGCTCGAAATTCGAATTTGAATATTGGGATCTACTACGGTTCGATTACCGGTTCGGTTTATTATAGAGACCAGAAAATTGGGTCGACGCCGTTGCTGGATTCGTATTATGAGGCGCCGAAGACTACTAAGGTGTTGGCGGCGGTGCTGAGCGGCGCGACGTTGAATATCAATAATGAACGGTGGATGGAGTTTAATAATGACCGGTCTAAAGGGACCGTGGCTTTCCGGTTGGAGATTACGTCCACTATCCGGTTTAGGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGATGATTTTGCCTTCTTCCAGGGATGTGAGATGCCCGGTTTATTTTACCTGA

Protein sequence

MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT
BLAST of Carg26535 vs. NCBI nr
Match: XP_022955056.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.4 bits (1178), Expect = 1.4e-125
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT
Sbjct: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY
Sbjct: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120

Query: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180
           YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT
Sbjct: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180

Query: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT
Sbjct: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 225

BLAST of Carg26535 vs. NCBI nr
Match: XP_023522985.1 (NDR1/HIN1-like protein 26, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453.8 bits (1166), Expect = 3.5e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT
Sbjct: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY
Sbjct: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120

Query: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180
           YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT
Sbjct: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180

Query: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVY 224
           STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVY
Sbjct: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVY 223

BLAST of Carg26535 vs. NCBI nr
Match: XP_022994264.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima])

HSP 1 Score: 449.5 bits (1155), Expect = 6.6e-123
Identity = 221/225 (98.22%), Postives = 222/225 (98.67%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           M SPSQLPVHHTNTPE RPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT
Sbjct: 1   MQSPSQLPVHHTNTPERRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY
Sbjct: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120

Query: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180
           YRDQKIGSTPLLDSYYE PKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT
Sbjct: 121 YRDQKIGSTPLLDSYYEGPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180

Query: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           STIRFRISTWDSKRHGMHANCDVSVGPDGMILPS+RDVRCPVYFT
Sbjct: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSARDVRCPVYFT 225

BLAST of Carg26535 vs. NCBI nr
Match: XP_016899097.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 6.9e-104
Identity = 187/228 (82.02%), Postives = 204/228 (89.47%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHR---PIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE R   P K HH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDFSV G GL+ GFENAQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY+DQKIGSTPLLDSYYE PKTTKVL A LSGATLN++ ++WME +N+RSKG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRHGMHANC VSVG DGMILPSS+DVRCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

BLAST of Carg26535 vs. NCBI nr
Match: XP_004153455.1 (PREDICTED: protein NDR1 [Cucumis sativus] >KGN64554.1 hypothetical protein Csa_1G064760 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 8.4e-102
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHR---PIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE     P KRHH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDF+V GL LE GFE+AQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY++QKIGSTPLLDSYYE PKTTKVL A LSGATLNI+ +RWME +N+RSKG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRH MHANC VSVG DGMILPSS+D+RCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

BLAST of Carg26535 vs. TAIR10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 274.2 bits (700), Expect = 6.9e-74
Identity = 124/219 (56.62%), Postives = 165/219 (75.34%), Query Frame = 0

Query: 7   LPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLS 66
           +P+  +  P  +P+KRHH+A YY HRV+ESL+TR+SK ICA+FL +L  VG+I FILWLS
Sbjct: 8   IPIRTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLS 67

Query: 67  LRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRDQKI 126
           LRPHRPRF I DF V GL   TG ENA+IAFNVT  N N ++G+Y+ S+ GS+YY+DQ++
Sbjct: 68  LRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRV 127

Query: 127 GSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITSTIRFR 186
           G  PLL+ +++ P  T ++   L+GA+L +N+ RW EF+NDR++GTV FRL+I STIRF+
Sbjct: 128 GLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFK 187

Query: 187 ISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           +  W SK H MHANC++ VG DG+ILP     RCPVYFT
Sbjct: 188 LHRWISKHHRMHANCNIVVGRDGLILPKFNHKRCPVYFT 226

BLAST of Carg26535 vs. TAIR10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-68
Identity = 124/226 (54.87%), Postives = 163/226 (72.12%), Query Frame = 0

Query: 1   MHSP-SQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           MH+    LPV   + P  RPI RHH+A   VHRVKESLTTR+SKLICAIFLSLLL +GII
Sbjct: 1   MHNKVDSLPVR--SNPSTRPISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGII 60

Query: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120
           TFILW+SL+PHRPR  I  FS+ GL    GFE + I+F +TA N N N+GIYY S+ GSV
Sbjct: 61  TFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSV 120

Query: 121 YYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180
           YY++++IGST L + +Y+ PK T  +   LS   + +N +RWME   DR++G + FRL++
Sbjct: 121 YYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKV 180

Query: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
            S IRF++ TW SK H M+A+C + +G DGM+L +++D RCPVYFT
Sbjct: 181 RSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDKRCPVYFT 224

BLAST of Carg26535 vs. TAIR10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-17
Identity = 51/160 (31.87%), Postives = 81/160 (50.62%), Query Frame = 0

Query: 45  ICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLET-GFENAQIAFNVTARN 104
           IC    ++L+I+GII  ILWL  RPH+PR  +   ++  L        +  + F+V ARN
Sbjct: 44  ICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARN 103

Query: 105 SNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWME 164
            N  + I+Y  ++  V Y+DQ I     L       K+T V+A V+ G  + ++ E    
Sbjct: 104 PNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVANG 163

Query: 165 FNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDV 204
             ND + G V  R+ I   +R++     + R+G +A CDV
Sbjct: 164 LKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDV 203

BLAST of Carg26535 vs. TAIR10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16
Identity = 44/163 (26.99%), Postives = 80/163 (49.08%), Query Frame = 0

Query: 50  LSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGL-ETGFENAQIAFNVTARNSNLNI 109
           L L++ V  + F++W  L PH PRF + D ++    + +  F ++ +   V++RN N  I
Sbjct: 29  LGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTVSSRNPNDKI 88

Query: 110 GIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDR 169
           GI+Y  +   V YR+Q++    LL S Y+      V +  L G+ + +        N D 
Sbjct: 89  GIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAPYLSSALNEDL 148

Query: 170 SKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMI 212
             G V   ++I   +R+++ +W S  + +H NC   +   G +
Sbjct: 149 FAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFITVTGKL 191

BLAST of Carg26535 vs. TAIR10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 82.0 bits (201), Expect = 5.0e-16
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 0

Query: 45  ICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVT--AR 104
           + A+F+ L+++ GI   +L+L  RP  P++ I  FSV G+ L +       +FNVT  +R
Sbjct: 79  LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNS-TSPISPSFNVTVRSR 138

Query: 105 NSNLNIGIYYGSITG-SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERW 164
           N N  IG+YY   +   VYY D  I S  ++  +Y+  K   V+  VLSG+ + + +   
Sbjct: 139 NGNGKIGVYYEKESSVDVYYNDVDI-SNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMR 198

Query: 165 MEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPS 215
            E  N+ SK TV F+L+I + ++ +  +  +    ++ +CDV+V  D +  PS
Sbjct: 199 KEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV--DKLTAPS 246

BLAST of Carg26535 vs. Swiss-Prot
Match: sp|Q9ZVD2|NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.1e-15
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 0

Query: 45  ICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVT--AR 104
           + A+F+ L+++ GI   +L+L  RP  P++ I  FSV G+ L +       +FNVT  +R
Sbjct: 79  LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNS-TSPISPSFNVTVRSR 138

Query: 105 NSNLNIGIYYGSITG-SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERW 164
           N N  IG+YY   +   VYY D  I S  ++  +Y+  K   V+  VLSG+ + + +   
Sbjct: 139 NGNGKIGVYYEKESSVDVYYNDVDI-SNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMR 198

Query: 165 MEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPS 215
            E  N+ SK TV F+L+I + ++ +  +  +    ++ +CDV+V  D +  PS
Sbjct: 199 KEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV--DKLTAPS 246

BLAST of Carg26535 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 45/156 (28.85%), Postives = 77/156 (49.36%), Query Frame = 0

Query: 49  FLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETG---FENAQIAFNVTARNSN 108
           F  LLLI+    F++WL L P RP F + +  +  L L T      N+ +   + ++N N
Sbjct: 35  FSGLLLII----FLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPN 94

Query: 109 LNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFN 168
             +GIYY  +     YR Q+I S   L  +Y++ +   +L A L G  L +      + +
Sbjct: 95  KKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQIS 154

Query: 169 NDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANC 202
            +RS G +   +++   +R++I TW S  +  + NC
Sbjct: 155 RERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNC 186

BLAST of Carg26535 vs. Swiss-Prot
Match: sp|O48915|NDR1_ARATH (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = 0

Query: 46  CAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLE-TGFENAQIAFNVTARNS 105
           C   LS +   G+ +  LWLSLR  +P+  I +F +P LG +    +N  + F V   N 
Sbjct: 15  CTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDNP 74

Query: 106 NLNIGIYYGSI-TGSVYYRDQKIGSTPL-LDSYYEAPKTTK--VLAAVLSGATLNINNER 165
           N + GIYY  +          KI S+ L L   Y  PK  +     A   G    +NN+ 
Sbjct: 75  NKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQT 134

Query: 166 WMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGM 211
            +        G+  FRL++ + +RF+I  W +KR+G+    DV V  DG+
Sbjct: 135 VL--RAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGV 182

BLAST of Carg26535 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.1e-11
Identity = 48/166 (28.92%), Postives = 74/166 (44.58%), Query Frame = 0

Query: 41  LSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENA---QIAF 100
           L  L   + +SL++I+G+   I WL +RP   +F + D S+      T  +N     +A 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFD-HTSPDNILRYNLAL 96

Query: 101 NVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNI- 160
            V  RN N  IG+YY  I    YY  ++  ST  L  +Y+  K T VL     G  L I 
Sbjct: 97  TVPVRNPNKRIGLYYDRIEAHAYYEGKRF-STITLTPFYQGHKNTTVLTPTFQGQNLVIF 156

Query: 161 NNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCD 203
           N  +    N +R  G     ++    +RF++     +R     +CD
Sbjct: 157 NAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 200

BLAST of Carg26535 vs. Swiss-Prot
Match: sp|Q9SRN0|NHL1_ARATH (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 38/165 (23.03%), Postives = 75/165 (45.45%), Query Frame = 0

Query: 43  KLICAIFLSLLLIV---GIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFEN---AQIA 102
           KLI  IF S++ ++        ++W  L+P +PRF + D +V    +     N   +   
Sbjct: 13  KLIRRIFWSIIFVLXXXXXXXLLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQ 72

Query: 103 FNVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNI 162
             +++RN N  IGIYY  +     YR Q+I     +   Y+  K   + +  + G ++ I
Sbjct: 73  ITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI 132

Query: 163 NNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANC 202
                +  + D+  G V   +     +R+++ T+ + ++ +H  C
Sbjct: 133 APFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 177

BLAST of Carg26535 vs. TrEMBL
Match: tr|A0A1S4DSX4|A0A1S4DSX4_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 4.6e-104
Identity = 187/228 (82.02%), Postives = 204/228 (89.47%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHR---PIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE R   P K HH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDFSV G GL+ GFENAQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY+DQKIGSTPLLDSYYE PKTTKVL A LSGATLN++ ++WME +N+RSKG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRHGMHANC VSVG DGMILPSS+DVRCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

BLAST of Carg26535 vs. TrEMBL
Match: tr|A0A0A0LUA7|A0A0A0LUA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.6e-102
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHR---PIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE     P KRHH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDF+V GL LE GFE+AQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY++QKIGSTPLLDSYYE PKTTKVL A LSGATLNI+ +RWME +N+RSKG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRH MHANC VSVG DGMILPSS+D+RCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

BLAST of Carg26535 vs. TrEMBL
Match: tr|A0A2P5EIG5|A0A2P5EIG5_9ROSA (Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_188560 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.5e-86
Identity = 160/227 (70.48%), Postives = 191/227 (84.14%), Query Frame = 0

Query: 1   MH-SPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           MH  P +LP+     PE RPIKRHHTAR+YVHRV ESLTTR+SKLIC IFLSLLL+VGII
Sbjct: 1   MHQDPDRLPIQ--RGPEPRPIKRHHTARFYVHRVHESLTTRVSKLICGIFLSLLLLVGII 60

Query: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120
           TFILWLSLRPHRPRF IH+FSVPGL  E GFENA+I+FN +ARNSN NIGI Y S+ GSV
Sbjct: 61  TFILWLSLRPHRPRFHIHEFSVPGLSQENGFENARISFNASARNSNQNIGIRYDSMDGSV 120

Query: 121 YYRDQKIGSTPL-LDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLE 180
           YYRDQKIGSTPL L+++Y+ PK+T+ +    SGATL +N++RW EF NDR++GTV FRLE
Sbjct: 121 YYRDQKIGSTPLILETFYQEPKSTRDIIGAFSGATLTVNSQRWKEFMNDRARGTVVFRLE 180

Query: 181 ITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
            TSTIRFR+S+W+SKRH M+ANCDV VGPDG+ILP S++ +CPVYF+
Sbjct: 181 FTSTIRFRVSSWESKRHRMYANCDVDVGPDGLILPISKNRKCPVYFS 225

BLAST of Carg26535 vs. TrEMBL
Match: tr|V4TPA5|V4TPA5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017613mg PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.6e-83
Identity = 148/225 (65.78%), Postives = 186/225 (82.67%), Query Frame = 0

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           MHS  +LPV   +TP+++PIKRH+TARYY HRV+ESLTTR+SK +C IFLSLLL+ GII 
Sbjct: 1   MHSTDRLPVR--STPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIIL 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           F+L+LSLRPHRPR FIH+FS+P L    GFENA+I FNVTARNSN ++GIY+ S+ GSVY
Sbjct: 61  FVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVY 120

Query: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180
           Y++Q++G+TPL D++++ PKTT +L A LSGATL +N+ RWMEF +DR +G V FRLEI 
Sbjct: 121 YKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSGRWMEFMHDRGQGKVGFRLEIK 180

Query: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           STIRF++STWDSKRH MHA CDV VG DG ILP+ +D RCP+YFT
Sbjct: 181 STIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223

BLAST of Carg26535 vs. TrEMBL
Match: tr|A0A2P5AX01|A0A2P5AX01_PARAD (Late embryogenesis abundant protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_292520 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.6e-83
Identity = 153/223 (68.61%), Postives = 186/223 (83.41%), Query Frame = 0

Query: 4   PSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFIL 63
           P +LP+     PE +PIKRH+TAR YVHRV ESLTTR+SKLIC IFLSLLL+VGIITFIL
Sbjct: 5   PDRLPIQ--RGPEPQPIKRHNTARDYVHRVHESLTTRVSKLICGIFLSLLLLVGIITFIL 64

Query: 64  WLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRD 123
           WLSLRPHRPRF IH+FSVPGL  E GFENA+I+FN +ARNSN NIG+ Y S+ GSVYYRD
Sbjct: 65  WLSLRPHRPRFHIHEFSVPGLSQENGFENARISFNASARNSNQNIGLRYDSMNGSVYYRD 124

Query: 124 QKIGSTPLL-DSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITST 183
           QKIGSTPL+ + +Y+ PK+T+ +    SGATL +N++RW EF NDR++GTV FRLE  ST
Sbjct: 125 QKIGSTPLIPEPFYQEPKSTRDIIGAFSGATLTVNSQRWKEFMNDRARGTVVFRLEFAST 184

Query: 184 IRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           IRFR+S+W+SKRH M+ANCDV VGPDG+ILP S++ +CPVYF+
Sbjct: 185 IRFRVSSWESKRHRMYANCDVDVGPDGLILPISKNRKCPVYFS 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022955056.11.4e-125100.00NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like pr... [more]
XP_023522985.13.5e-124100.00NDR1/HIN1-like protein 26, partial [Cucurbita pepo subsp. pepo][more]
XP_022994264.16.6e-12398.22NDR1/HIN1-like protein 26 [Cucurbita maxima][more]
XP_016899097.16.9e-10482.02PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo][more]
XP_004153455.18.4e-10281.14PREDICTED: protein NDR1 [Cucumis sativus] >KGN64554.1 hypothetical protein Csa_1... [more]
Match NameE-valueIdentityDescription
AT4G05220.16.9e-7456.62Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT1G61760.11.5e-6854.87Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT4G01410.14.6e-1731.88Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT5G22200.12.3e-1626.99Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT2G27080.15.0e-1632.37Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
Match NameE-valueIdentityDescription
sp|Q9ZVD2|NHL13_ARATH9.1e-1532.37NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1[more]
sp|Q9FI03|NHL26_ARATH2.0e-1428.85NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1[more]
sp|O48915|NDR1_ARATH1.5e-1231.18Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1[more]
sp|Q9SJ52|NHL10_ARATH6.1e-1128.92NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
sp|Q9SRN0|NHL1_ARATH4.4e-0923.03NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S4DSX4|A0A1S4DSX4_CUCME4.6e-10482.02NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1[more]
tr|A0A0A0LUA7|A0A0A0LUA7_CUCSA5.6e-10281.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 SV=1[more]
tr|A0A2P5EIG5|A0A2P5EIG5_9ROSA1.5e-8670.48Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_1... [more]
tr|V4TPA5|V4TPA5_9ROSI2.6e-8365.78Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017613mg PE=4 ... [more]
tr|A0A2P5AX01|A0A2P5AX01_PARAD2.6e-8368.61Late embryogenesis abundant protein OS=Parasponia andersonii OX=3476 GN=PanWU01x... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26535-RACarg26535-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 98..201
e-value: 4.0E-9
score: 36.8
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 13..224
NoneNo IPR availablePANTHERPTHR31415:SF3LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 13..224