Cp4.1LG09g08860 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g08860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCp4.1LG09 : 8109055 .. 8109732 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAGCCCCAGCCAATTGCCAGTGCACCACACCAACACGCCCGAACACCGCCCAATCAAGCGCCACCACACAGCGCGCTACTACGTTCACCGTGTCAAGGAGAGCCTCACCACCCGCTTGTCAAAGCTCATATGCGCCATCTTCTTAAGCTTGTTGCTAATCGTGGGCATCATTACGTTTATTCTCTGGCTCAGTTTACGACCCCACCGGCCCAGGTTTTTTATCCACGACTTTTCGGTTCCCGGTTTGGGTTTGGAGACCGGGTTCGAGAATGCCCAGATTGCGTTCAATGTCACGGCTCGAAATTCGAATTTGAATATTGGGATCTACTACGGTTCGATTACCGGTTCGGTTTATTATAGAGACCAGAAAATTGGGTCGACGCCGTTGCTGGATTCGTATTATGAGGCGCCGAAGACTACTAAGGTGTTGGCGGCGGTGCTGAGCGGCGCGACGTTGAATATCAATAATGAACGGTGGATGGAGTTTAATAATGACCGGTCTAAAGGGACCGTGGCTTTCCGGTTGGAGATTACGTCCACTATCCGGTTTAGGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGATGATTTTGCCTTCTTCCAGGGATGTGAGATGCCCGGTTTATTTTACCTGA

mRNA sequence

ATGCATAGCCCCAGCCAATTGCCAGTGCACCACACCAACACGCCCGAACACCGCCCAATCAAGCGCCACCACACAGCGCGCTACTACGTTCACCGTGTCAAGGAGAGCCTCACCACCCGCTTGTCAAAGCTCATATGCGCCATCTTCTTAAGCTTGTTGCTAATCGTGGGCATCATTACGTTTATTCTCTGGCTCAGTTTACGACCCCACCGGCCCAGGTTTTTTATCCACGACTTTTCGGTTCCCGGTTTGGGTTTGGAGACCGGGTTCGAGAATGCCCAGATTGCGTTCAATGTCACGGCTCGAAATTCGAATTTGAATATTGGGATCTACTACGGTTCGATTACCGGTTCGGTTTATTATAGAGACCAGAAAATTGGGTCGACGCCGTTGCTGGATTCGTATTATGAGGCGCCGAAGACTACTAAGGTGTTGGCGGCGGTGCTGAGCGGCGCGACGTTGAATATCAATAATGAACGGTGGATGGAGTTTAATAATGACCGGTCTAAAGGGACCGTGGCTTTCCGGTTGGAGATTACGTCCACTATCCGGTTTAGGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGATGATTTTGCCTTCTTCCAGGGATGTGAGATGCCCGGTTTATTTTACCTGA

Coding sequence (CDS)

ATGCATAGCCCCAGCCAATTGCCAGTGCACCACACCAACACGCCCGAACACCGCCCAATCAAGCGCCACCACACAGCGCGCTACTACGTTCACCGTGTCAAGGAGAGCCTCACCACCCGCTTGTCAAAGCTCATATGCGCCATCTTCTTAAGCTTGTTGCTAATCGTGGGCATCATTACGTTTATTCTCTGGCTCAGTTTACGACCCCACCGGCCCAGGTTTTTTATCCACGACTTTTCGGTTCCCGGTTTGGGTTTGGAGACCGGGTTCGAGAATGCCCAGATTGCGTTCAATGTCACGGCTCGAAATTCGAATTTGAATATTGGGATCTACTACGGTTCGATTACCGGTTCGGTTTATTATAGAGACCAGAAAATTGGGTCGACGCCGTTGCTGGATTCGTATTATGAGGCGCCGAAGACTACTAAGGTGTTGGCGGCGGTGCTGAGCGGCGCGACGTTGAATATCAATAATGAACGGTGGATGGAGTTTAATAATGACCGGTCTAAAGGGACCGTGGCTTTCCGGTTGGAGATTACGTCCACTATCCGGTTTAGGATATCCACGTGGGATAGTAAGCGCCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCGATGGGATGATTTTGCCTTCTTCCAGGGATGTGAGATGCCCGGTTTATTTTACCTGA

Protein sequence

MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT
BLAST of Cp4.1LG09g08860 vs. Swiss-Prot
Match: NDR1_ARATH (Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = 1

Query: 46  CAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGF-ENAQIAFNVTARNS 105
           C   LS +   G+ +  LWLSLR  +P+  I +F +P LG +    +N  + F V   N 
Sbjct: 15  CTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDNP 74

Query: 106 NLNIGIYYGSI-TGSVYYRDQKIGSTPL-LDSYYEAPKTTK--VLAAVLSGATLNINNER 165
           N + GIYY  +          KI S+ L L   Y  PK  +     A   G    +NN+ 
Sbjct: 75  NKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQT 134

Query: 166 WMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGM 211
            +        G+  FRL++ + +RF+I  W +KR+G+    DV V  DG+
Sbjct: 135 VLRAV--LPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGV 182

BLAST of Cp4.1LG09g08860 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.1e-12
Identity = 38/162 (23.46%), Postives = 78/162 (48.15%), Query Frame = 1

Query: 45  ICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGL-ETGFENAQIAFNVTARN 104
           IC + +  ++IV I  F++W+ L+P +PRF + D +V    L +     +     + +RN
Sbjct: 21  ICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRN 80

Query: 105 SNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWME 164
            N  IGIYY  +     YR+Q+I     +   Y+  K   V +  + G ++ I     + 
Sbjct: 81  RNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVA 140

Query: 165 FNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSV 206
             +++++G V   +     +R+++ T  + ++ +H  C   +
Sbjct: 141 LGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

BLAST of Cp4.1LG09g08860 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.0e-11
Identity = 48/166 (28.92%), Postives = 74/166 (44.58%), Query Frame = 1

Query: 41  LSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENA---QIAF 100
           L  L   + +SL++I+G+   I WL +RP   +F + D S+      T  +N     +A 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFD-HTSPDNILRYNLAL 96

Query: 101 NVTARNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNI- 160
            V  RN N  IG+YY  I    YY  ++  ST  L  +Y+  K T VL     G  L I 
Sbjct: 97  TVPVRNPNKRIGLYYDRIEAHAYYEGKRF-STITLTPFYQGHKNTTVLTPTFQGQNLVIF 156

Query: 161 NNERWMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCD 203
           N  +    N +R  G     ++    +RF++     +R     +CD
Sbjct: 157 NAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 200

BLAST of Cp4.1LG09g08860 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 47/165 (28.48%), Postives = 75/165 (45.45%), Query Frame = 1

Query: 44  LICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLE-TGFENAQIAFNVTAR 103
           +I  I +++ +++GI   I+WL  RP+  +F + D  +    L+ T      +  N T R
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 104 NSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNI--NNER 163
           N N  IG+YY  I    YY DQ+ G +  +  +Y+  K T V+   L G  L +    ER
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 164 WMEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSV 206
             + N D +        ++   IRF+     S R      CD+ V
Sbjct: 167 -KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKV 210

BLAST of Cp4.1LG09g08860 vs. Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 1

Query: 67  LRPHRPRFFIHDFSVPGLGLETGFENAQ--IAFNVTARNSNLNIGIYYGSITGSVYYRDQ 126
           +R +  +F ++D  +    LE+   N Q  ++ N++ RNS  +IGI+Y     +VYY +Q
Sbjct: 2   VRSNDVKFQVYDAELTHFDLESN-NNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQ 61

Query: 127 KIGSTPLLDSYYEAPKTTKVLAAVLSGATLNI--NNERWMEFNNDRSKGTVAFRLEITST 186
           ++G+ P +  +Y   K T +L A+  G TL +   NER  +F +D+  G   +R+++  +
Sbjct: 62  RLGAVP-MPLFYLGSKNTMLLRALFEGQTLVLLKGNER-KKFEDDQKTG--VYRIDVKLS 121

Query: 187 IRFRIS-----TWDSK 194
           I FR+      TW  K
Sbjct: 122 INFRVMVLHLVTWPMK 132

BLAST of Cp4.1LG09g08860 vs. TrEMBL
Match: A0A0A0LUA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064760 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.0e-102
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEHRPI---KRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE  P    KRHH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDF+V GL LE GFE+AQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY++QKIGSTPLLDSYYE PKTTKVL A LSGATLNI+ +RWME +N+RSKG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRH MHANC VSVG DGMILPSS+D+RCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

BLAST of Cp4.1LG09g08860 vs. TrEMBL
Match: V4TPA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017613mg PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-83
Identity = 148/225 (65.78%), Postives = 186/225 (82.67%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           MHS  +LPV   +TP+++PIKRH+TARYY HRV+ESLTTR+SK +C IFLSLLL+ GII 
Sbjct: 1   MHSTDRLPVR--STPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIIL 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           F+L+LSLRPHRPR FIH+FS+P L    GFENA+I FNVTARNSN ++GIY+ S+ GSVY
Sbjct: 61  FVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVY 120

Query: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180
           Y++Q++G+TPL D++++ PKTT +L A LSGATL +N+ RWMEF +DR +G V FRLEI 
Sbjct: 121 YKNQRVGATPLADTFFQEPKTTTILHATLSGATLTVNSGRWMEFMHDRGQGKVGFRLEIK 180

Query: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           STIRF++STWDSKRH MHA CDV VG DG ILP+ +D RCP+YFT
Sbjct: 181 STIRFQVSTWDSKRHTMHATCDVFVGTDGFILPAYKDKRCPLYFT 223

BLAST of Cp4.1LG09g08860 vs. TrEMBL
Match: W9QEY6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014826 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.1e-83
Identity = 154/228 (67.54%), Postives = 183/228 (80.26%), Query Frame = 1

Query: 1   MHSPSQ---LPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           MHS  Q   LP+   + PE RP+KRHHT RYY HRVKESLTTR+SK+ICAIFL LL IVG
Sbjct: 1   MHSSGQDRVLPIQ--SGPESRPLKRHHTPRYYAHRVKESLTTRVSKMICAIFLGLLFIVG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
            ITFILWLSLRPHRPRF IH+FSVPGLG E+GFENAQI  N +ARN N NIGI Y S+ G
Sbjct: 61  FITFILWLSLRPHRPRFHIHEFSVPGLGQESGFENAQITVNASARNPNQNIGIRYDSMEG 120

Query: 121 SVYYRDQKIGSTPLL-DSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFR 180
           SVYYRDQKIG+ PL+ + + + PK T V+    SGATL ++++RWMEF NDR++G V FR
Sbjct: 121 SVYYRDQKIGTKPLMHEPFSQEPKNTTVIDGTFSGATLTVSSQRWMEFTNDRARGMVVFR 180

Query: 181 LEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYF 225
           LE+TS IRFR+S+W+SKRH MHANCDV VGPDG+ILP S++ +CPVYF
Sbjct: 181 LELTSMIRFRVSSWESKRHRMHANCDVDVGPDGLILPGSKNRKCPVYF 226

BLAST of Cp4.1LG09g08860 vs. TrEMBL
Match: M5WM48_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015351mg PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.5e-82
Identity = 151/225 (67.11%), Postives = 182/225 (80.89%), Query Frame = 1

Query: 2   HSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITF 61
           +SP +LP+ +  TPE + +KR HT RYY HRV+ESLTTR+SKL C IFL LLLI+G+I F
Sbjct: 3   NSPDRLPIQYP-TPEPQRMKRQHTPRYYAHRVRESLTTRVSKLFCTIFLGLLLILGMIAF 62

Query: 62  ILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYY 121
           ILWLSLRPHRPRF IH F+VPGL  ETGFENAQI FN TARN+N +IGIYY S+ GS YY
Sbjct: 63  ILWLSLRPHRPRFHIHAFTVPGLNQETGFENAQITFNATARNANHDIGIYYDSMDGSAYY 122

Query: 122 RDQKIGS-TPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 181
           +DQ+IGS + LL  +Y+ PK T ++A   +GATL +N++RWMEF NDRS+GTV FRLE +
Sbjct: 123 KDQRIGSISGLLPPFYQGPKNTTIVAGSFTGATLTVNSQRWMEFINDRSRGTVVFRLEFS 182

Query: 182 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           +TIRFRI +WDSKRH MHANCDV VG DG+ILP S+D RCPVYFT
Sbjct: 183 ATIRFRIQSWDSKRHRMHANCDVDVGQDGLILPVSKDRRCPVYFT 226

BLAST of Cp4.1LG09g08860 vs. TrEMBL
Match: A0A067JAH1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21277 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.8e-81
Identity = 150/225 (66.67%), Postives = 175/225 (77.78%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           M++  +LPV   + P    IKRHHTARYY HRV ESLTTR+SKLICA FL +L + GI+ 
Sbjct: 1   MNTSERLPVSSGSQPP--AIKRHHTARYYAHRVHESLTTRVSKLICASFLIILFVAGIVA 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           FILWLSLRPHRPR  IH+FSVP LG   GF+NAQI FNV+ARNSN +IG YYG + GSVY
Sbjct: 61  FILWLSLRPHRPRIHIHNFSVPALGQGNGFDNAQIIFNVSARNSNQHIGFYYGKVEGSVY 120

Query: 121 YRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEIT 180
           Y+DQ IG TPLLD +Y+ PK T V+  VL GATLN+N++RW EF NDRS+GTV FRL+IT
Sbjct: 121 YKDQMIGYTPLLDPFYQEPKNTTVMTGVLGGATLNLNSQRWNEFLNDRSQGTVIFRLDIT 180

Query: 181 STIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           STI F++STW SK H MHANC+V VGPDG IL   RD RCPVYFT
Sbjct: 181 STIEFKVSTWHSKNHRMHANCNVGVGPDGSILALYRDKRCPVYFT 223

BLAST of Cp4.1LG09g08860 vs. TAIR10
Match: AT4G05220.1 (AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 274.2 bits (700), Expect = 6.9e-74
Identity = 124/219 (56.62%), Postives = 165/219 (75.34%), Query Frame = 1

Query: 7   LPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIITFILWLS 66
           +P+  +  P  +P+KRHH+A YY HRV+ESL+TR+SK ICA+FL +L  VG+I FILWLS
Sbjct: 8   IPIRTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLS 67

Query: 67  LRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVYYRDQKI 126
           LRPHRPRF I DF V GL   TG ENA+IAFNVT  N N ++G+Y+ S+ GS+YY+DQ++
Sbjct: 68  LRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRV 127

Query: 127 GSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEITSTIRFR 186
           G  PLL+ +++ P  T ++   L+GA+L +N+ RW EF+NDR++GTV FRL+I STIRF+
Sbjct: 128 GLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFK 187

Query: 187 ISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           +  W SK H MHANC++ VG DG+ILP     RCPVYFT
Sbjct: 188 LHRWISKHHRMHANCNIVVGRDGLILPKFNHKRCPVYFT 226

BLAST of Cp4.1LG09g08860 vs. TAIR10
Match: AT1G61760.1 (AT1G61760.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-68
Identity = 124/226 (54.87%), Postives = 163/226 (72.12%), Query Frame = 1

Query: 1   MHSP-SQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           MH+    LPV   + P  RPI RHH+A   VHRVKESLTTR+SKLICAIFLSLLL +GII
Sbjct: 1   MHNKVDSLPVR--SNPSTRPISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGII 60

Query: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120
           TFILW+SL+PHRPR  I  FS+ GL    GFE + I+F +TA N N N+GIYY S+ GSV
Sbjct: 61  TFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSV 120

Query: 121 YYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180
           YY++++IGST L + +Y+ PK T  +   LS   + +N +RWME   DR++G + FRL++
Sbjct: 121 YYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKV 180

Query: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
            S IRF++ TW SK H M+A+C + +G DGM+L +++D RCPVYFT
Sbjct: 181 RSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDKRCPVYFT 224

BLAST of Cp4.1LG09g08860 vs. TAIR10
Match: AT4G01410.1 (AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-17
Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 1

Query: 43  KLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLET-GFENAQIAFNVTA 102
           + IC    ++L+I+GII  ILWL  RPH+PR  +   ++  L        +  + F+V A
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query: 103 RNSNLNIGIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERW 162
           RN N  + I+Y  ++  V Y+DQ I     L       K+T V+A V+ G  + ++ E  
Sbjct: 102 RNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEVA 161

Query: 163 MEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDV 204
               ND + G V  R+ I   +R++     + R+G +A CDV
Sbjct: 162 NGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDV 203

BLAST of Cp4.1LG09g08860 vs. TAIR10
Match: AT5G22200.1 (AT5G22200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16
Identity = 44/163 (26.99%), Postives = 80/163 (49.08%), Query Frame = 1

Query: 50  LSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGL-ETGFENAQIAFNVTARNSNLNI 109
           L L++ V  + F++W  L PH PRF + D ++    + +  F ++ +   V++RN N  I
Sbjct: 29  LGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTVSSRNPNDKI 88

Query: 110 GIYYGSITGSVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDR 169
           GI+Y  +   V YR+Q++    LL S Y+      V +  L G+ + +        N D 
Sbjct: 89  GIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAPYLSSALNEDL 148

Query: 170 SKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMI 212
             G V   ++I   +R+++ +W S  + +H NC   +   G +
Sbjct: 149 FAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFITVTGKL 191

BLAST of Cp4.1LG09g08860 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 82.0 bits (201), Expect = 5.0e-16
Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = 1

Query: 45  ICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVT--AR 104
           + A+F+ L+++ GI   +L+L  RP  P++ I  FSV G+ L +    +  +FNVT  +R
Sbjct: 79  LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISP-SFNVTVRSR 138

Query: 105 NSNLNIGIYYGSITG-SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERW 164
           N N  IG+YY   +   VYY D  I S  ++  +Y+  K   V+  VLSG+ + + +   
Sbjct: 139 NGNGKIGVYYEKESSVDVYYNDVDI-SNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMR 198

Query: 165 MEFNNDRSKGTVAFRLEITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPS 215
            E  N+ SK TV F+L+I + ++ +  +  +    ++ +CDV+V  D +  PS
Sbjct: 199 KEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV--DKLTAPS 246

BLAST of Cp4.1LG09g08860 vs. NCBI nr
Match: gi|659067831|ref|XP_008441513.1| (PREDICTED: protein NDR1 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 3.5e-104
Identity = 187/228 (82.02%), Postives = 204/228 (89.47%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEHRPI---KRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE RP    K HH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQRPTAPTKHHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDFSV G GL+ GFENAQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFSVTGFGLDNGFENAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY+DQKIGSTPLLDSYYE PKTTKVL A LSGATLN++ ++WME +N+RSKG V FRL
Sbjct: 121 SVYYKDQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNVDRQQWMEMSNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRHGMHANC VSVG DGMILPSS+DVRCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHGMHANCPVSVGSDGMILPSSKDVRCPVYFT 228

BLAST of Cp4.1LG09g08860 vs. NCBI nr
Match: gi|449471964|ref|XP_004153455.1| (PREDICTED: protein NDR1 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 4.3e-102
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEHRPI---KRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVG 60
           M+SPS LPVHHT+TPE  P    KRHH+ARYY HRVKESLTTR+SKLICAIFLSLLLI+G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 61  IITFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITG 120
           IITFILWLSLRPHRPRFFIHDF+V GL LE GFE+AQI FN TARNSNLNIGIYY +++G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 121 SVYYRDQKIGSTPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRL 180
           SVYY++QKIGSTPLLDSYYE PKTTKVL A LSGATLNI+ +RWME +N+RSKG V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 181 EITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           EITSTIRFRIS WDSKRH MHANC VSVG DGMILPSS+D+RCPVYFT
Sbjct: 181 EITSTIRFRISAWDSKRHVMHANCPVSVGSDGMILPSSKDLRCPVYFT 228

BLAST of Cp4.1LG09g08860 vs. NCBI nr
Match: gi|694309350|ref|XP_009365849.1| (PREDICTED: protein YLS9-like [Pyrus x bretschneideri])

HSP 1 Score: 325.5 bits (833), Expect = 7.4e-86
Identity = 157/227 (69.16%), Postives = 184/227 (81.06%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEH-RPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           M +  +LP+ ++ TPE  RP+KR HT RYY HRV+ESLTTR+SKLIC IFLSLLLI+G+I
Sbjct: 1   MFNSDRLPIQYSTTPEQQRPMKRQHTTRYYAHRVRESLTTRVSKLICTIFLSLLLILGMI 60

Query: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120
           TFILWLSLRPHRPRF IH FSVPGLG ETGF NA+I FN TARN+N NIGIYY S+  +V
Sbjct: 61  TFILWLSLRPHRPRFHIHAFSVPGLGQETGFANAEIMFNATARNANHNIGIYYDSMDATV 120

Query: 121 YYRDQKIGS-TPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLE 180
           YYRDQ+IGS T LLD +Y+ PK T ++     GATL +NN+RWMEF NDR+KGTV FRLE
Sbjct: 121 YYRDQRIGSITGLLDPFYQGPKNTTIVMGSFQGATLTVNNQRWMEFTNDRTKGTVVFRLE 180

Query: 181 ITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
            T+TIRF+I  WDS+RH MHANCDV VG DG+ILP S+D RCPVYFT
Sbjct: 181 FTATIRFKIHAWDSRRHRMHANCDVDVGQDGLILPISKDRRCPVYFT 227

BLAST of Cp4.1LG09g08860 vs. NCBI nr
Match: gi|657959182|ref|XP_008371132.1| (PREDICTED: protein YLS9-like [Malus domestica])

HSP 1 Score: 325.5 bits (833), Expect = 7.4e-86
Identity = 157/227 (69.16%), Postives = 184/227 (81.06%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEH-RPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGII 60
           M++  +LP+ ++ TPE  RP++R HTARYY HRV+ESLTTR+SKLIC IFLSLLLI+G+I
Sbjct: 1   MYNSDRLPIQYSTTPEQQRPMRRQHTARYYAHRVRESLTTRVSKLICTIFLSLLLILGMI 60

Query: 61  TFILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSV 120
           TFILWLSLRPHRPRF IH FSVPGLG ETGF NA I FN TARN+N NIGIYY S+  +V
Sbjct: 61  TFILWLSLRPHRPRFHIHAFSVPGLGQETGFANAGIMFNATARNANHNIGIYYDSMDXTV 120

Query: 121 YYRDQKIGS-TPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLE 180
           YYRDQ++GS T LLD +Y+ PK T ++     GATL +NN+RWMEF NDR KGTV FRLE
Sbjct: 121 YYRDQRVGSITGLLDPFYQGPKNTTIVMGSFQGATLTVNNQRWMEFTNDRKKGTVVFRLE 180

Query: 181 ITSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
            T+TIRFRI  WDS+RH MHANCDV VG DG+ILP S+D RCPVYFT
Sbjct: 181 FTATIRFRIHAWDSRRHRMHANCDVDVGQDGLILPISKDRRCPVYFT 227

BLAST of Cp4.1LG09g08860 vs. NCBI nr
Match: gi|694446527|ref|XP_009349601.1| (PREDICTED: protein YLS9-like [Pyrus x bretschneideri])

HSP 1 Score: 323.2 bits (827), Expect = 3.7e-85
Identity = 154/226 (68.14%), Postives = 181/226 (80.09%), Query Frame = 1

Query: 1   MHSPSQLPVHHTNTPEHRPIKRHHTARYYVHRVKESLTTRLSKLICAIFLSLLLIVGIIT 60
           M +  +LP+ ++   + RP+KR HT RYY HRV+ESLTTR+SKLIC IFLSLLLI+G+IT
Sbjct: 1   MFNSDRLPIQYSTPEQQRPMKRQHTTRYYAHRVRESLTTRVSKLICTIFLSLLLILGMIT 60

Query: 61  FILWLSLRPHRPRFFIHDFSVPGLGLETGFENAQIAFNVTARNSNLNIGIYYGSITGSVY 120
           FILWLSLRPHRPRF IH FSVPGLG ETGF NA+I FN TARN+N NIGIYY S+  +VY
Sbjct: 61  FILWLSLRPHRPRFHIHAFSVPGLGQETGFANAEIMFNATARNANHNIGIYYDSMDATVY 120

Query: 121 YRDQKIGS-TPLLDSYYEAPKTTKVLAAVLSGATLNINNERWMEFNNDRSKGTVAFRLEI 180
           Y+DQ+IGS T LLD +Y+ PK T ++     GATL +NN+RWMEF NDR KGTV FRLE 
Sbjct: 121 YKDQRIGSITGLLDPFYQGPKNTTIVMGSFQGATLTVNNQRWMEFTNDRKKGTVVFRLEF 180

Query: 181 TSTIRFRISTWDSKRHGMHANCDVSVGPDGMILPSSRDVRCPVYFT 226
           T+TIRFRI  WDS+RH MHANCDV VG DG+ILP S+D RCPVYFT
Sbjct: 181 TATIRFRIHAWDSRRHRMHANCDVDVGQDGLILPISKDRRCPVYFT 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
NDR1_ARATH1.4e-1231.18Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1[more]
NHL12_ARATH7.1e-1223.46NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
YLS9_ARATH6.0e-1128.92Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH1.3e-1028.48NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
SYP24_ARATH2.5e-0930.88Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LUA7_CUCSA3.0e-10281.14Uncharacterized protein OS=Cucumis sativus GN=Csa_1G064760 PE=4 SV=1[more]
V4TPA5_9ROSI1.4e-8365.78Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017613mg PE=4 SV=1[more]
W9QEY6_9ROSA3.1e-8367.54Uncharacterized protein OS=Morus notabilis GN=L484_014826 PE=4 SV=1[more]
M5WM48_PRUPE4.5e-8267.11Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015351mg PE=4 SV=1[more]
A0A067JAH1_JATCU3.8e-8166.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21277 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G05220.16.9e-7456.62 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT1G61760.11.5e-6854.87 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT4G01410.14.6e-1731.48 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G22200.12.3e-1626.99 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G27080.15.0e-1632.37 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
Match NameE-valueIdentityDescription
gi|659067831|ref|XP_008441513.1|3.5e-10482.02PREDICTED: protein NDR1 [Cucumis melo][more]
gi|449471964|ref|XP_004153455.1|4.3e-10281.14PREDICTED: protein NDR1 [Cucumis sativus][more]
gi|694309350|ref|XP_009365849.1|7.4e-8669.16PREDICTED: protein YLS9-like [Pyrus x bretschneideri][more]
gi|657959182|ref|XP_008371132.1|7.4e-8669.16PREDICTED: protein YLS9-like [Malus domestica][more]
gi|694446527|ref|XP_009349601.1|3.7e-8568.14PREDICTED: protein YLS9-like [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g08860.1Cp4.1LG09g08860.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 99..201
score: 8.
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 10..224
score: 1.5E
NoneNo IPR availablePANTHERPTHR31415:SF3LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 10..224
score: 1.5E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g08860Cp4.1LG20g03880Cucurbita pepo (Zucchini)cpecpeB048