Cp4.1LG19g08320 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG19g08320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ras-related protein
Location	Cp4.1LG19 : 6613362 .. 6616049 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCACAGTAATTCCGGCATACGTTGTTTCCATGCTTTCTCGTTCTTTCCTTTAGAATTGCTCTCGATTTCTCAGATTTTCTTAAATCTACACGATGATCTTCGGCTTTTGTAGAGTTGTTTAAACACCAATCAAACTGAAATCATACATTTCTTGCGATTAATCCGTGTAGTCTGAAGCAGATCCTGTCGGAACAATGTCTTATGCTTACCTCTTCAAGTACATCGTCATCGGTGATACTGGTACGTCTCTCACCCTTCCGAACTATTGGATCGTTTTTCCTTTCCATTATGTTCCAATTGAAGATCGGTTTGCATTTGTGTTTCTCGAATTCTTGCGCGTCGTGTGGTTTCTTCGGTCTCGGCTTTTGCTTGGATCAATTTCATTATAATCGCCGAAATGAGATTTTTTCACCCCCGCTCGATTTCTATTATATTTGTTGCGAATCACATTGTTCGTCTTCTTCAGGAGTTGGGAAATCGTGTCTTCTTCTTCAGTTTACGGATAATCGATTCCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATAACCATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGTATATTCCCCTGGTTTCTCATTCGAATTTTCTGTTTGTTGTTGTTACCTAAATCGAAGACTTGTGTGATCCTTATGAAGTCGAGAGACGGTATATATATATTCTTGTGGCATGATTTCTTTGGTAACTTGTAAATTTTCTGTCGCTTAGTGTAGGAGTCTCCAAAATATGCTGTCATTCTCCATGTACATTTATAATGTTTAGGGTTTGCATTTTCCTTTTGTGCATATTGTAATTGGAACCAAACTTAGCTACTTCCTCACGCTCTTAGAGTATACCTTTTCTATTGTCTAGTTCATAATTTATTGAACAAGTGGGTCCATTGATACTTTCCGCCTAATAAAGGTAAGCAACAAGTTGGATGCATTACTATATATGTATATATATTTTCTTAGTTCAACAAATTTTGGGATCGAGATAAAATCATCGATCTTTGGAATGGTAATTAATATTTTGTCCATGAGCTATTACTGATTAGTGTTTAGGTAACTTTTTGTTCCTTACAAAGTAATCATTCCTTTTTTTTGTCAATTGGCATGATTTTGGACCATGTTGTGGAATCTGTGCATTATGATGATCTCTTGTCTAAGCATGAAATTTGTTGTATTACCATCTGGTCAAAATTTTTTTCCATGTTGGCAAACCTCGGTGTCTACACAATTCTAATTGTTAAAGTTTGTGACTGTAACAGGCCGGCCAAGAGTCATTCAGATCCATCACGAGGTCCTACTACAGGGGTGCTGCTGGTGCCTTGCTCGTCTATGATATCACCAGGTCTTATTTTTTTCCCTTTTCTTCTTGAATGACTGATTAGTATGCGAATGCTGCGTTCTTGCAAGTTCATCCTATTAATACTGGATTTTATATGCATCATTATAAAGATTGGTTGAAGTCACGTTGAAAATGGATACCCAATTAGATTTTTTTATTGTATGAAGTTTTTCGTTCTAATTTGCCTTTACCAAGCTCCTTACTTTACACGAGATTGTGGTGAATGCATTATTCAGAAGGGAAACTTTCAACCACTTAGTTAGTTGGCTAGAAGATGCGAGGCAGCATGCTAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAAGGAGCACGGTTTAGTCTTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGTGATTACATAAAATCTGCTTGTTTGGGTGTAAATCGTATAGTATTTAGAGCATTTAAGACACTCAATCTCTCTTGCAGGCATTCGTAAGGACCGCAGCAACCATATTCAAGAAGATTCAGGATGGAGTTTTTGACGTTTCAAATGAGGTTAACATCCATCTCTATCTTTTCTACGTCGACATACCTTTCGTATCCAATAATTTTGGTGAAATTAAAGTTCTAGCACTGTATTGAATGTTAAAGATGACGAACTCTTGATTCGTTATGGGAAGAATGAATTGGATGTTAATGTTTTTAACCAAACAAAAAGAGTATGCTCTACTTGTAATATAATGGCACATAACGATCAAGGAATGGCTGCATATGTGTTGCTGATGCTGCATTTTGTGTGATCTTCAGTCTTATGGAATCAAAGTTGGATATGGGGGGATACCAGGACCAGCAGGAGGCAGAGAGGGATCATCTTCCCAAGTTGGCGGCTGTTGCAGCAATTGAACCTTGAACCTGTAGAAACTAGCTGACTTCAATCTGTCTGTGCCTCAATTTCAATTTTTTTCTTCTATTCTTCTTCATCATTTCTCATGTGCTGCAGTGAAATGTGAATATTGGAGCAAGAAGCGTCTGTGTTAAAGGAATAGCCAGGTTCCGTGAATGCTAGGCTATCATCAATCTGTGCTGTCAGTTCAATTGTAAATCAACATTGATTTGAATTCATTAGTTCATGCGGTGAAAGAACCTTTTGCTTCATTGGTTGTTTTTTTCAGGTTTGATCGATGTGGAAATTGGATCGGACTTTCAATTTGAAAGAATATCTCTTTAAGACGTGTCATATATTGAGCTGAGCTACGTTTGAATTGCACCCTATTT

mRNA sequence

CATCACAGTAATTCCGGCATACGTTGTTTCCATGCTTTCTCGTTCTTTCCTTTAGAATTGCTCTCGATTTCTCAGATTTTCTTAAATCTACACGATGATCTTCGGCTTTTGTAGAGTTGTTTAAACACCAATCAAACTGAAATCATACATTTCTTGCGATTAATCCGTGTAGTCTGAAGCAGATCCTGTCGGAACAATGTCTTATGCTTACCTCTTCAAGTACATCGTCATCGGTGATACTGGAGTTGGGAAATCGTGTCTTCTTCTTCAGTTTACGGATAATCGATTCCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATAACCATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGCCGGCCAAGAGTCATTCAGATCCATCACGAGGTCCTACTACAGGGGTGCTGCTGGTGCCTTGCTCGTCTATGATATCACCAGAAGGGAAACTTTCAACCACTTAGTTAGTTGGCTAGAAGATGCGAGGCAGCATGCTAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAAGGAGCACGGTTTAGTCTTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGCATTCGTAAGGACCGCAGCAACCATATTCAAGAAGATTCAGGATGGAGTTTTTGACGTTTCAAATGAGGTTAACATCCATCTCTATCTTTTCTACGTCGACATACCTTTCGTATCCAATAATTTTGGTGAAATTAAAGTTCTAGCACTTCTTATGGAATCAAAGTTGGATATGGGGGGATACCAGGACCAGCAGGAGGCAGAGAGGGATCATCTTCCCAAGTTGGCGGCTGTTGCAGCAATTGAACCTTGAACCTTGAAATGTGAATATTGGAGCAAGAAGCGTCTGTGTTAAAGGAATAGCCAGGTTCCGTGAATGCTAGGCTATCATCAATCTGTGCTGTCAGTTCAATTGTAAATCAACATTGATTTGAATTCATTAGTTCATGCGGTGAAAGAACCTTTTGCTTCATTGGTTGTTTTTTTCAGGTTTGATCGATGTGGAAATTGGATCGGACTTTCAATTTGAAAGAATATCTCTTTAAGACGTGTCATATATTGAGCTGAGCTACGTTTGAATTGCACCCTATTT

Coding sequence (CDS)

ATGTCTTATGCTTACCTCTTCAAGTACATCGTCATCGGTGATACTGGAGTTGGGAAATCGTGTCTTCTTCTTCAGTTTACGGATAATCGATTCCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATAACCATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGCCGGCCAAGAGTCATTCAGATCCATCACGAGGTCCTACTACAGGGGTGCTGCTGGTGCCTTGCTCGTCTATGATATCACCAGAAGGGAAACTTTCAACCACTTAGTTAGTTGGCTAGAAGATGCGAGGCAGCATGCTAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAAGGAGCACGGTTTAGTCTTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGCATTCGTAAGGACCGCAGCAACCATATTCAAGAAGATTCAGGATGGAGTTTTTGACGTTTCAAATGAGGTTAACATCCATCTCTATCTTTTCTACGTCGACATACCTTTCGTATCCAATAATTTTGGTGAAATTAAAGTTCTAGCACTTCTTATGGAATCAAAGTTGGATATGGGGGGATACCAGGACCAGCAGGAGGCAGAGAGGGATCATCTTCCCAAGTTGGCGGCTGTTGCAGCAATTGAACCTTGA

Protein sequence

MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSNEVNIHLYLFYVDIPFVSNNFGEIKVLALLMESKLDMGGYQDQQEAERDHLPKLAAVAAIEP

Homology

[Close]

BLAST of Cp4.1LG19g08320 vs. Swiss-Prot
Match: RAB1C_ARATH (Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 2.9e-96
Identity = 172/181 (95.03%), Postives = 178/181 (98.34%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.7e-94
Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DL+HRRAVS EEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.8e-93
Identity = 167/181 (92.27%), Postives = 174/181 (96.13%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DL+HRRAVS EEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-89
Identity = 160/181 (88.40%), Postives = 168/181 (92.82%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+ K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DL HRRAV+TEEGEQFAKEHGL+F+E SA+TA NVEEAF+ TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-89
Identity = 160/181 (88.40%), Postives = 168/181 (92.82%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+ K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DL HRRAV+TEEGEQFAKEHGL+F+E SA+TA NVEEAF+ TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TrEMBL
Match: A0A0A0KMV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510340 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.9e-96
Identity = 177/181 (97.79%), Postives = 180/181 (99.45%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TrEMBL
Match: A9PCI9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00400g PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.5e-95
Identity = 173/181 (95.58%), Postives = 179/181 (98.90%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TrEMBL
Match: W5GKG2_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.5e-94
Identity = 173/191 (90.58%), Postives = 183/191 (95.81%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMT+MLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DL+HRRAVS EEGEQFAKEHGLVFMEASAKTAQNVEEAF++TA TI+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180

Query: 181 EVNIHLYLFYV 192
           EV++ L+ F V
Sbjct: 181 EVSVKLHEFSV 191

[Close]

BLAST of Cp4.1LG19g08320 vs. TrEMBL
Match: M5WV77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011412mg PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.2e-94
Identity = 172/181 (95.03%), Postives = 178/181 (98.34%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TrEMBL
Match: V7BNL7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G135400g PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.2e-94
Identity = 172/181 (95.03%), Postives = 178/181 (98.34%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TAIR10
Match: AT4G17170.1 (AT4G17170.1 RAB GTPase homolog B1C)

HSP 1 Score: 352.8 bits (904), Expect = 1.6e-97
Identity = 172/181 (95.03%), Postives = 178/181 (98.34%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TAIR10
Match: AT4G35860.1 (AT4G35860.1 GTP-binding 2)

HSP 1 Score: 327.4 bits (838), Expect = 7.4e-90
Identity = 157/181 (86.74%), Postives = 170/181 (93.92%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAF+ TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. TAIR10
Match: AT4G17160.1 (AT4G17160.1 RAB GTPase homolog B1A)

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-85
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAY FKYI+IGDTGVGKSCLLL+FTD RFQ VHDLTIGVEFGA+ ITI+NKPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL SWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DL  +R VSTEEGEQFA+EHGL+FMEASAKTA NVEEAFV TAATI+K+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 EVNI 185
           E  I
Sbjct: 181 EPGI 184

[Close]

BLAST of Cp4.1LG19g08320 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 191.8 bits (486), Expect = 4.8e-49
Identity = 91/179 (50.84%), Postives = 122/179 (68.16%), Query Frame = 1


Query: 3   YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R I +++K +K QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNKSD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL++ R H +AN+ IM +GNK+D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSNE 182
           L H RAVSTE+ + FA+     FME SA  + NVE AF    + I++ +     D+ ++
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDD 188

[Close]

BLAST of Cp4.1LG19g08320 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 89/167 (53.29%), Postives = 118/167 (70.66%), Query Frame = 1


Query: 3   YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R + ++ K +K QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNKSD 122
           AGQE +R+IT +YYRGA GALLVYD+TRR TF ++  WL++ + H + N+ +ML+GNKSD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFK 170
           L H  AV TE+G+ +A++  L FME SA  A NVE+AF      I++
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYR 176

[Close]

BLAST of Cp4.1LG19g08320 vs. NCBI nr
Match: gi|449434064|ref|XP_004134816.1| (PREDICTED: ras-related protein RABB1c-like [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 8.5e-96
Identity = 177/181 (97.79%), Postives = 180/181 (99.45%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. NCBI nr
Match: gi|659080734|ref|XP_008440951.1| (PREDICTED: ras-related protein RABB1c-like [Cucumis melo])

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-95
Identity = 176/181 (97.24%), Postives = 180/181 (99.45%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
           SDLAHRRAV+TEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVTTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. NCBI nr
Match: gi|566207899|ref|XP_006373561.1| (hypothetical protein POPTR_0016s00400g [Populus trichocarpa])

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 173/181 (95.58%), Postives = 179/181 (98.90%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Cp4.1LG19g08320 vs. NCBI nr
Match: gi|657951081|ref|XP_008351114.1| (PREDICTED: ras-related protein RABB1c-like [Malus domestica])

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 173/183 (94.54%), Postives = 180/183 (98.36%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EVN 184
           EV+
Sbjct: 181 EVS 183

[Close]

BLAST of Cp4.1LG19g08320 vs. NCBI nr
Match: gi|729310923|ref|XP_010530090.1| (PREDICTED: ras-related protein RABB1c-like [Tarenaya hassleriana])

HSP 1 Score: 354.4 bits (908), Expect = 1.6e-94
Identity = 173/181 (95.58%), Postives = 179/181 (98.90%), Query Frame = 1


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF+RTAA+I+KKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIRTAASIYKKIQDGVFDVSN 180

Query: 181 E 182
           E
Sbjct: 181 E 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g08320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAB1C_ARATH	2.9e-96	95.03	Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1	[more]
RAB2B_MAIZE	4.7e-94	92.82	Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1	[more]
RAB2A_MAIZE	1.8e-93	92.27	Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1	[more]
YPTV4_VOLCA	2.0e-89	88.40	GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1	[more]
YPTC4_CHLRE	2.0e-89	88.40	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1	[more]

BLAST of Cp4.1LG19g08320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMV2_CUCSA	5.9e-96	97.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510340 PE=4 SV=1	[more]
A9PCI9_POPTR	8.5e-95	95.58	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00400g PE=2 SV=1	[more]
W5GKG2_WHEAT	2.5e-94	90.58	Uncharacterized protein OS=Triticum aestivum PE=4 SV=1	[more]
M5WV77_PRUPE	3.2e-94	95.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011412mg PE=4 SV=1	[more]
V7BNL7_PHAVU	3.2e-94	95.03	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G135400g PE=4 SV=1	[more]

BLAST of Cp4.1LG19g08320 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17170.1	1.6e-97	95.03	RAB GTPase homolog B1C	[more]
AT4G35860.1	7.4e-90	86.74	GTP-binding 2	[more]
AT4G17160.1	1.4e-85	82.61	RAB GTPase homolog B1A	[more]
AT5G60860.1	4.8e-49	50.84	RAB GTPase homolog A1F	[more]
AT1G16920.1	1.8e-48	53.29	RAB GTPase homolog A1B	[more]

BLAST of Cp4.1LG19g08320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434064\|ref\|XP_004134816.1\|	8.5e-96	97.79	PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]	[more]
gi\|659080734\|ref\|XP_008440951.1\|	1.9e-95	97.24	PREDICTED: ras-related protein RABB1c-like [Cucumis melo]	[more]
gi\|566207899\|ref\|XP_006373561.1\|	1.2e-94	95.58	hypothetical protein POPTR_0016s00400g [Populus trichocarpa]	[more]
gi\|657951081\|ref\|XP_008351114.1\|	1.2e-94	94.54	PREDICTED: ras-related protein RABB1c-like [Malus domestica]	[more]
gi\|729310923\|ref\|XP_010530090.1\|	1.6e-94	95.58	PREDICTED: ras-related protein RABB1c-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0030100	regulation of endocytosis
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005768	endosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g08320.1	Cp4.1LG19g08320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 8..167 score: 2.2
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 7..160 score: 4.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 2..178 score: 2.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..187 score: 5.89
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 145..167 score: 4.3E-41coord: 30..46 score: 4.3E-41coord: 48..70 score: 4.3E-41coord: 110..123 score: 4.3E-41coord: 7..28 score: 4.3
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..181 score: 3.9E
None	No IPR available	PANTHER	PTHR24073:SF545	RAS-RELATED PROTEIN RABB1C	coord: 1..181 score: 3.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 score: 7.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..170 score: 7.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 score: 3.5E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..219 score: 8.
None	No IPR available	PROFILE	PS51419	RAB	coord: 2..240 score: 35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG19g08320	Cucsa.044430	Cucumber (Gy14) v1	cgycpeB0039
Cp4.1LG19g08320	CmaCh07G003690	Cucurbita maxima (Rimu)	cmacpeB880
Cp4.1LG19g08320	CmoCh07G003640	Cucurbita moschata (Rifu)	cmocpeB817
Cp4.1LG19g08320	Cla014371	Watermelon (97103) v1	cpewmB482
Cp4.1LG19g08320	Csa6G510340	Cucumber (Chinese Long) v2	cpecuB503
Cp4.1LG19g08320	MELO3C007993	Melon (DHL92) v3.5.1	cpemeB449
Cp4.1LG19g08320	ClCG01G021070	Watermelon (Charleston Gray)	cpewcgB425
Cp4.1LG19g08320	CSPI06G32640	Wild cucumber (PI 183967)	cpecpiB503
Cp4.1LG19g08320	Lsi01G005140	Bottle gourd (USVL1VR-Ls)	cpelsiB396
Cp4.1LG19g08320	MELO3C007993.2	Melon (DHL92) v3.6.1	cpemedB531
Cp4.1LG19g08320	CsaV3_6G048070	Cucumber (Chinese Long) v3	cpecucB0618
Cp4.1LG19g08320	Bhi03G000541	Wax gourd	cpewgoB0607
Cp4.1LG19g08320	CsGy6G032250	Cucumber (Gy14) v2	cgybcpeB810
Cp4.1LG19g08320	Carg07900	Silver-seed gourd	carcpeB0915

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG19g08320	Cucurbita pepo (Zucchini)	cpecpeB076
Cp4.1LG19g08320	Cucurbita maxima (Rimu)	cmacpeB671
Cp4.1LG19g08320	Cucurbita moschata (Rifu)	cmocpeB624
Cp4.1LG19g08320	Silver-seed gourd	carcpeB0563