CmoCh07G003640 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G003640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAN GTPase 3
Location	Cmo_Chr07 : 1665931 .. 1669031 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAACTTCTTCTCTACTTCTCTTAGCTTACCTGTATTGTCTTCTTGTTATGAACTCTGTCTTATTCATCTCTTTGAGACTCTGGCAATGGCTATCTAATTTCACTATAATTTTAGTTACCACCAAATTAATATCATTCTGATTAATTTGGCTGTGATTATACTTTATACTAATTTTTTAGAATAAGGTTATTTATAGATTTTGTTTTAATTCTTTGAATATACAATAAGCTCCTCATACATTTACTTGAATATGTTTTTTTTTCTTTGAATTAGTTTATAAAATTTAAATTATCACTTAATTAGATATCATTTTTAGTCACCATATTTAGCTATAATAACTAAAAAATTATACATGTTTTTAAATTAATCTTCTTTTTTTGTTTGCTCTAAATTGTTCCTCAAATATTAAGAGAAATATCTGTATTTTTTCGGTATTAATTATTTGTAAAAAAATGTTTGAAAAAAAAAAAGAAATTAGAAATTAAAAAATTAAAAAATAATAAAAATCGAAATTTACTAGAAAAATGCATCACAGTAATTCCGGCCTACGTTGTTTCCATGCTTTCTCGTTCTTTCCTTTAGAATTGCTCTCGATTTCTCAGATTTTCTTAAATCTACACGATGATCTTCGGCTTTTGTAGAGTTCTTTAAACACCAATCAAACTGAAATCATACATTTCTTGCGATTAATCCGTGTAGTCTGAAGCAGATCCTGTCGGAACAATGTCTTATGCTTACCTCTTCAAGTACATCGTCATCGGTGATACTGGTACGTCTCTCACCCTTCCGAACTATTGGATCGTTTTTCCTTTCCATAATGTTCCAATTGAAGATCGGTTTGCATTTGTGTTTCTCGAATTCTTGCGCGTCGTGTGGTTTCTTCGGTCTCGGCTTTTGCTTGGATCAATTTCATTATAATCGCCGAAATGAGATTTTTTCACCCCCGCTCGATTTCTATGATATATTTGTTGCGAATCACATTGTTCGTCTTCTTCAGGAGTTGGCAAATCGTGTCTTCTTCTTCAGTTTACGGATAATCGATTCCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATAACCATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGTATATTCCCCTGGTTTCTCATTCGAATTTTCTGTTTGTTGTTGTAACCTAAATCGAAGACTTGTGTGATTCTTATGAAGTCGAGAGACGGTATATATATATTCTTGTGGCATGATTTCTTTGGTAACTTGTAAATTTTCTGTCGCTTAGTGTAGGAGTCTCCAAAATATGCTGTCATTCTCCATGTACATTTATAATGTTTAGGGTTTGCATTTTCCTTTTGTGCATATTGTAATTGGAACCAAACTTAGCTACTTCCTCACGCTCTTAGAGTATACCTTTTCTATTGTCTAGTTCATAATTTATTGAACAAGTGGGTCCATTGATACTTTCCGCCTAATAAAGGTAAGCCACAAGTTGGATGCATTACTCTATATGTATATATATTCCTTAGTTCAACAAATTTTGGGATCGAGATAAAATCATCGATCTTTGGAATGGTAATTAATATTTTGTCCATGAGCTATTACTAATTAGTGTTTAGGTAACTTTTTGTTCCTTAAAAAGTAATCATTCCTTTTTTTGTCAATTGGCATGATTTTGGACCATGTTGGGGAATCTGTGCATAATGATGATCTCTTGTCGAAGCATGAAATTTGTTGTATTACCATCTGGTCAAGATTTTTCTCCATGTTGGCAAACCTCAGTGTCTACACAATTCTAATTGTTAAAGTTTGTACGACTGTAACAGGCCGGCCAAGAGTCATTCAGATCCATCACGAGGTCCTACTACAGGGGTGCTGCTGGTGCCTTGCTCGTCTATGATATCACCAGGTCTTATTTTGTTCCCTTTTCTTCTTGAATGACTGATTAGTATGCGAATGCTGAGTTCTTGCAAGTTCATCCTATTAATACTGGATTTTATATGCATTATAAAGATTGGACTTGTCAGGAAGTGGTCCTTTGAAGTCACGTTGAAAATGGATACCCAATTAGATTTTTTTATTGTATGAAGTTTTTCGTTTTAATTTGCCTTTACCAAGCTCCTTATTTTACACGAGATGTGGTGAATGCATTATTCAGAAGGGAAACTTTCAACCACTTAGTTAGTTGGCTAGAAGATGCGAGGCAGCATGCTAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAAGGAGCACGGTTTAGTCTTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGTGATTACATAAAATCTGCTTGTTTGGGTGTAAATCGTATAGTATTTAGAGCATTTAAGAAACTCAATCTCTCTTGCAGGCATTCGTAAGGACCGCAGCAACCATATTCAAGAAGATTCAGGATGGAGTTTTTGACGTTTCAAATGAGGTTAACATCCATCTTTACCTTTTCTACGTCGACATACCTTTCGTATCCAATAATTTTGGTGAAATTAAAGTTCTAGCACTCATTGAATGTTAAAGATGACGAACTCTTGATTCTTTATGGGAAGAATGAATTGGATGTTAATGTTTTTAACCAAACAAAAAGAGTATGTTCTACTTGTAATGTAATGGCACATAACGATCAAGGAATGGCTGCACATGTGTTGCTGATGCTGCATTTTGTGTGATCTTCAGTCTTATGGAATCAAAGTTGGATATGGGGGGATACCAGGACCAGCAGGAGGCAGAGAGGGATCATCTTCCCAAGTTGGCGGCTGTTGCAGCAATTGAACCTTGAACCTGTAGAAACTAGCTGACTTCAATCTATCTGTGCCTCAATTTCAATTTTTTTCTTCTATTCTTTTTCATCATTTCTCATGTGCTGCAGTGAAATGTGAATATTGGAGCAAGAAGCGTCTGTGTTAAAGGAATAGCCAGGTTCTGTGAATGCTAGGCTATCATCAATCTGTGCTGTCAGTTCAATTGTAAATCAACATTGATTTGAATTCATTAGTTCATGACGT

mRNA sequence

ATGGAAGGAAACTTCTTCTCTACTTCTCTTAGCTTACCTGTATTGTCTTCTTGTTATGAACTCTATCCTGTCGGAACAATGTCTTATGCTTACCTCTTCAAGTACATCGTCATCGGTGATACTGGAGTTGGCAAATCGTGTCTTCTTCTTCAGTTTACGGATAATCGATTCCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATAACCATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGCCGGCCAAGAGTCATTCAGATCCATCACGAGGTCCTACTACAGGGGTGCTGCTGGTGCCTTGCTCGTCTATGATATCACCAGAAGGGAAACTTTCAACCACTTAGTTAGTTGGCTAGAAGATGCGAGGCAGCATGCTAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAAGGAGCACGGTTTAGTCTTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGCATTCGTAAGGACCGCAGCAACCATATTCAAGAAGATTCAGGATGGAGTTTTTGACGTTTCAAATGAGTCTTATGGAATCAAAGTTGGATATGGGGGGATACCAGGACCAGCAGGAGGCAGAGAGGGATCATCTTCCCAAGTTGGCGGCTGTTGCAGCAATTGAACCTTGAACCTGTAGAAACTAGCTGACTTCAATCTATCTGTGCCTCAATTTCAATTTTTTTCTTCTATTCTTTTTCATCATTTCTCATGTGCTGCAGTGAAATGTGAATATTGGAGCAAGAAGCGTCTGTGTTAAAGGAATAGCCAGGTTCTGTGAATGCTAGGCTATCATCAATCTGTGCTGTCAGTTCAATTGTAAATCAACATTGATTTGAATTCATTAGTTCATGACGT

Coding sequence (CDS)

ATGGAAGGAAACTTCTTCTCTACTTCTCTTAGCTTACCTGTATTGTCTTCTTGTTATGAACTCTATCCTGTCGGAACAATGTCTTATGCTTACCTCTTCAAGTACATCGTCATCGGTGATACTGGAGTTGGCAAATCGTGTCTTCTTCTTCAGTTTACGGATAATCGATTCCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATAACCATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGCCGGCCAAGAGTCATTCAGATCCATCACGAGGTCCTACTACAGGGGTGCTGCTGGTGCCTTGCTCGTCTATGATATCACCAGAAGGGAAACTTTCAACCACTTAGTTAGTTGGCTAGAAGATGCGAGGCAGCATGCTAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAAGGAGCACGGTTTAGTCTTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGCATTCGTAAGGACCGCAGCAACCATATTCAAGAAGATTCAGGATGGAGTTTTTGACGTTTCAAATGAGTCTTATGGAATCAAAGTTGGATATGGGGGGATACCAGGACCAGCAGGAGGCAGAGAGGGATCATCTTCCCAAGTTGGCGGCTGTTGCAGCAATTGA

Homology

[Close]

BLAST of CmoCh07G003640 vs. Swiss-Prot
Match: RAB1C_ARATH (Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 8.3e-112
Identity = 197/210 (93.81%), Postives = 206/210 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCC 237
           ESYGIKVGYGGIPGP+GGR+GS+SQ GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of CmoCh07G003640 vs. Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.8e-105
Identity = 190/211 (90.05%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DL+HRRAVS EEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGY  IPG +GG   SSSQ GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of CmoCh07G003640 vs. Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.9e-103
Identity = 189/211 (89.57%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DL+HRRAVS EEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGY  +PG +GG  GSSSQ GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGG-AGSSSQGGGCCS 209

[Close]

BLAST of CmoCh07G003640 vs. Swiss-Prot
Match: RAB1B_ARATH (Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.8e-99
Identity = 176/210 (83.81%), Postives = 192/210 (91.43%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAF+ TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCC 237
           ES GIK+GYG   G AGGR+G+ SQ GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of CmoCh07G003640 vs. Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 6.4e-96
Identity = 177/215 (82.33%), Postives = 189/215 (87.91%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+ K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DL HRRAV+TEEGEQFAKEHGL+F+E SA+TA NVEEAF+ TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGR-----EGSSSQVGGCC 237
           ESYGIKVGYGG  G AG +     EG +++   CC
Sbjct: 181 ESYGIKVGYGG--GNAGPQTVKPGEGGAAKSSSCC 213

[Close]

BLAST of CmoCh07G003640 vs. TrEMBL
Match: A0A0A0KMV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510340 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.8e-112
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+G REGSS+Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. TrEMBL
Match: A0A067GT96_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028237mg PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.4e-111
Identity = 199/211 (94.31%), Postives = 207/211 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+GGR+GSSSQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. TrEMBL
Match: A0A023HJ68_HEVBR (Rab8 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.4e-111
Identity = 199/211 (94.31%), Postives = 207/211 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+GGR+GSSSQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. TrEMBL
Match: M5WV77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011412mg PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.4e-111
Identity = 199/211 (94.31%), Postives = 207/211 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+GGR+GSSSQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. TrEMBL
Match: V4UB37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016687mg PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-110
Identity = 198/210 (94.29%), Postives = 206/210 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCC 237
           ESYGIKVGYGGIPGP+GGR+GSSSQ GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 210

[Close]

BLAST of CmoCh07G003640 vs. TAIR10
Match: AT4G17170.1 (AT4G17170.1 RAB GTPase homolog B1C)

HSP 1 Score: 404.4 bits (1038), Expect = 4.7e-113
Identity = 197/210 (93.81%), Postives = 206/210 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCC 237
           ESYGIKVGYGGIPGP+GGR+GS+SQ GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of CmoCh07G003640 vs. TAIR10
Match: AT4G35860.1 (AT4G35860.1 GTP-binding 2)

HSP 1 Score: 362.8 bits (930), Expect = 1.6e-100
Identity = 176/210 (83.81%), Postives = 192/210 (91.43%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAF+ TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCC 237
           ES GIK+GYG   G AGGR+G+ SQ GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of CmoCh07G003640 vs. TAIR10
Match: AT4G17160.1 (AT4G17160.1 RAB GTPase homolog B1A)

HSP 1 Score: 323.9 bits (829), Expect = 8.1e-89
Identity = 164/211 (77.73%), Postives = 179/211 (84.83%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAY FKYI+IGDTGVGKSCLLL+FTD RFQ VHDLTIGVEFGA+ ITI+NKPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL SWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DL  +R VSTEEGEQFA+EHGL+FMEASAKTA NVEEAFV TAATI+K+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQV-GGCC 237
           E        G  PGP GG++ SSSQ   GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of CmoCh07G003640 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C)

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-50
Identity = 101/210 (48.10%), Postives = 135/210 (64.29%), Query Frame = 1


Query: 29  YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 88
           Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R + +++K IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 89  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNKSD 148
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H + N+ +ML+GNKSD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 149 LAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSNES 208
           L H  AV TE+ + FA++  L FME SA  A NVE AF      I   +     + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 209 YGIKVGYGGIPGPAGGREGSSSQVGGCCSN 239
             +      I     G++ S+ + GGCCSN
Sbjct: 190 ANVPSKGDKID---IGKDVSAVKKGGCCSN 216

[Close]

BLAST of CmoCh07G003640 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 99/210 (47.14%), Postives = 134/210 (63.81%), Query Frame = 1


Query: 29  YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 88
           Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R I +++K +K QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 89  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNKSD 148
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL++ R H +AN+ IM +GNK+D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129

Query: 149 LAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSNES 208
           L H RAVSTE+ + FA+     FME SA  + NVE AF    + I++ +     D+ ++ 
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189

Query: 209 YGIKVGYGGIPGPAGGREGSSSQVGGCCSN 239
             +  G     G     + S+ +  GCCSN
Sbjct: 190 AALPKGQTINVGSKD--DVSAVKKVGCCSN 217

[Close]

BLAST of CmoCh07G003640 vs. NCBI nr
Match: gi|449434064|ref|XP_004134816.1| (PREDICTED: ras-related protein RABB1c-like [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 8.3e-112
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+G REGSS+Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. NCBI nr
Match: gi|659080734|ref|XP_008440951.1| (PREDICTED: ras-related protein RABB1c-like [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 1.9e-111
Identity = 202/211 (95.73%), Postives = 208/211 (98.58%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
           SDLAHRRAV+TEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVTTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+G REGSSSQ GGCC+
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSSQTGGCCN 211

[Close]

BLAST of CmoCh07G003640 vs. NCBI nr
Match: gi|743807216|ref|XP_010928035.1| (PREDICTED: ras-related protein RABB1c-like [Elaeis guineensis])

HSP 1 Score: 408.3 bits (1048), Expect = 9.2e-111
Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF+ TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFISTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGPAGGR+GSSSQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPAGGRDGSSSQTGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. NCBI nr
Match: gi|470114435|ref|XP_004293420.1| (PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca])

HSP 1 Score: 408.3 bits (1048), Expect = 9.2e-111
Identity = 199/211 (94.31%), Postives = 207/211 (98.10%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF++TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGP+GGR+GSSSQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]

BLAST of CmoCh07G003640 vs. NCBI nr
Match: gi|672193197|ref|XP_008775967.1| (PREDICTED: ras-related protein RABB1c [Phoenix dactylifera])

HSP 1 Score: 408.3 bits (1048), Expect = 9.2e-111
Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 1


Query: 27  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 86
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 87  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 146
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 147 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 206
            DLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAF+ TAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFISTAATIYKKIQDGVFDVSN 180

Query: 207 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 238
           ESYGIKVGYGGIPGPAGGR+GSSSQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPAGGRDGSSSQAGGCCS 211

The following BLAST results are available for this feature:

BLAST of CmoCh07G003640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAB1C_ARATH	8.3e-112	93.81	Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1	[more]
RAB2B_MAIZE	5.8e-105	90.05	Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1	[more]
RAB2A_MAIZE	1.9e-103	89.57	Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1	[more]
RAB1B_ARATH	2.8e-99	83.81	Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2 SV=1	[more]
YPTC4_CHLRE	6.4e-96	82.33	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1	[more]

BLAST of CmoCh07G003640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMV2_CUCSA	5.8e-112	96.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510340 PE=4 SV=1	[more]
A0A067GT96_CITSI	6.4e-111	94.31	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028237mg PE=4 SV=1	[more]
A0A023HJ68_HEVBR	6.4e-111	94.31	Rab8 OS=Hevea brasiliensis PE=2 SV=1	[more]
M5WV77_PRUPE	6.4e-111	94.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011412mg PE=4 SV=1	[more]
V4UB37_9ROSI	1.9e-110	94.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016687mg PE=4 SV=1	[more]

BLAST of CmoCh07G003640 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17170.1	4.7e-113	93.81	RAB GTPase homolog B1C	[more]
AT4G35860.1	1.6e-100	83.81	GTP-binding 2	[more]
AT4G17160.1	8.1e-89	77.73	RAB GTPase homolog B1A	[more]
AT5G45750.1	2.5e-50	48.10	RAB GTPase homolog A1C	[more]
AT5G60860.1	3.7e-49	47.14	RAB GTPase homolog A1F	[more]

BLAST of CmoCh07G003640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434064\|ref\|XP_004134816.1\|	8.3e-112	96.21	PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]	[more]
gi\|659080734\|ref\|XP_008440951.1\|	1.9e-111	95.73	PREDICTED: ras-related protein RABB1c-like [Cucumis melo]	[more]
gi\|743807216\|ref\|XP_010928035.1\|	9.2e-111	94.79	PREDICTED: ras-related protein RABB1c-like [Elaeis guineensis]	[more]
gi\|470114435\|ref\|XP_004293420.1\|	9.2e-111	94.31	PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca]	[more]
gi\|672193197\|ref\|XP_008775967.1\|	9.2e-111	94.79	PREDICTED: ras-related protein RABB1c [Phoenix dactylifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0030100	regulation of endocytosis
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005773	vacuole
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005768	endosome
cellular_component	GO:0000139	Golgi membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G003640.1	CmoCh07G003640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 34..193 score: 2.2
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 33..186 score: 4.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 28..210 score: 6.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 28..204 score: 1.12
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 33..54 score: 4.1E-41coord: 171..193 score: 4.1E-41coord: 56..72 score: 4.1E-41coord: 74..96 score: 4.1E-41coord: 136..149 score: 4.1
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 25..238 score: 9.1E
None	No IPR available	PANTHER	PTHR24073:SF545	RAS-RELATED PROTEIN RABB1C	coord: 25..238 score: 9.1E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 30..196 score: 7.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 35..196 score: 7.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 33..196 score: 3.5E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 38..226 score: 1.
None	No IPR available	PROFILE	PS51419	RAB	coord: 28..238 score: 35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G003640	Cucsa.044430	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G003640	CmaCh18G006260	Cucurbita maxima (Rimu)	cmacmoB428
CmoCh07G003640	CmaCh07G003690	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G003640	Cla014371	Watermelon (97103) v1	cmowmB816
CmoCh07G003640	Csa6G510340	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G003640	MELO3C007993	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G003640	ClCG01G021070	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G003640	CSPI06G32640	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G003640	Lsi01G005140	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G003640	Cp4.1LG19g08320	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G003640	MELO3C007993.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G003640	CsaV3_6G048070	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G003640	Cla97C01G020650	Watermelon (97103) v2	cmowmbB849
CmoCh07G003640	Bhi03G000541	Wax gourd	cmowgoB1051
CmoCh07G003640	CsGy6G032250	Cucumber (Gy14) v2	cgybcmoB843

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G003640	Silver-seed gourd	carcmoB0554
CmoCh07G003640	Silver-seed gourd	carcmoB0888
CmoCh07G003640	Cucurbita moschata (Rifu)	cmocmoB455
CmoCh07G003640	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G003640	Cucurbita pepo (Zucchini)	cmocpeB806