Cp4.1LG19g07050 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG19g07050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionOptic atrophy 3 protein (OPA3)
LocationCp4.1LG19 : 7209768 .. 7213583 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCGACTTTTGCGAGGAAAAAATTAATAATCTTATATGGGGAAAATATTTTTCGGAATTTCCCTCGTCAAATATTGCTCGCGGGGAACCTAAACCATTTCCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTAGCTCTGACCGTGTGTTGTTAATTCCCGAAGGACAGCAAAAGCGAAGCCTTCCAATCAGATTACCGGATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGGTATTTATAATTTCGTTCTGGATTTCTGCTTATGGGTTCTTGATTCTTTGGTTGTGCTTCATTATGTTGTACTGATTTATACAAGATCATGTTTCGTTGAGTTGAGCTATTGTTATTGCAGCAAATAATTCGGCGCCCCTTTCATGGTCTTCTTTCAAACGATTCTTCTGATTGGTTGGTTTTGATCATTGTTTTATGCGTTACCTTCTTCTCAAGTAGTTGTGCTTGTTGGGTTAAGAAGTTCTTCAAACTTGCCCCATTCCAAATGAAATTGCTTCGTACGACAATGAATCCTCATCTTACACGAAATTAAGAAGCTCTTCAACTTAACCCCATTTAATTTTAACTGGTAAAGTTTAGAGAACGATGTTATATTATAACCAAAATCCAGCTAAAAGCAATTGCCATGTATTAAAATTTCTGAGCATTATCTGGAGATGGTCACTAGTTATCATTCTATTGGCTAGAACACTCTGACAATTTTACACAAATAGCTGTAGGTCCAAGGATGAGGATTATGTATGAATTTCATCAATTACAAAGTTAATAAAGGCCTATCTAAGAACATAATGGAACAAATACGAGGGGCTAGCTTTAGCTGTCTTTCATCTCTTATAAAATGACCAACTGTATACTTGTCAGGACTAGCAATCTCATAGGGATCTTTTATTTATAATTTTTTTGTTTGTGTTTGGGCTAGCTAAGCTAATGAGATAACTTCTTGACCATATAATAGTTTTTTGCCATGTAAACTCGATTCTAATGATACTCATTAGAATTTAGTTGAAAGATTGCCTTCCTATTCTCTTCTTCATCGAACAATCTCTTGAGCCCGTATCTGTTTTAGAGATGAGCCTCAAATCCAATCTATCAGCTAAAAGTCTTTCCTCAAGAAAGGGCCTTAGAATGAGCAAGGAACTTGTAACAATTTCATTCTCCGAACTATGTTGGAATTCATTGAAAGGATGCTAGGGAAGAGTTTTTTCTTAATCCGAACTAATTTCCGTTGCCCTGCTTCAACAAGTGTAGCCGACTCTCGTGGTGCCAAAATGCCTCTCTTAACTTCATTTTCTTTCTTTCTCCATTTTTTTTGTTTGAAAAATTTCCAAGAGTAGTAATATCTACTTAAGCCTGAGAGGTATAAGGGGAAGAAATTTGTGAAGTAATATCCACTTTAGTTGATTGGATACTTCCAAATACTTTTCTGTCGCAGGTGTTGTGTTTCTCCTTTACAGACGTACCTTCATCAGGAATGCCAGCCATGCTATGACAATGGAGTCTTACCTTCATTCATACATAAGCGATGAGATTTAGTTTTTCCAATTATAGATGCTTTAGAAAGTATGATCTGCAAAGGTTAGTTTGCATTGATTGTTTAGGGAGACACTTAGTTAAAGTGGGTGCTTCATGTTTGAATGTATGTTTGTATACTGCTAGCTTTACTTTATGAATAATTCTTAAGACCTCATTTCTTCAATGCTAAACTGACAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGATGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTAATATTCATTTTCAAGTAGAATCGCTTCTTTTTCTTTTGGTTAAGACCATTCCTAAACTGAAACATACTATATACCATGTTACAGCAAGTATTGATCAACTATATATTTCACGGATATTTAGCATTGTATTTTGGAAACTAAGGAGCTCATTTGTGAACCATTGTGCATACTTATGATTATAAGAAAATATCAACTAAGCGCTGTTTTATTTTGGGGTTCATTTTACCTTCGATGGAATTATGCCTCGATAATCTGCTCAGGTATTTGGGGTCTGGAAACCCCCAGTTGAGAATCCGAGACCTATCAGGAATACAACTCTTTGGACAAAGATGCAAGAGAAAATGTGTATATATGTAACGGCCCAAATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGCGCTTCCCCTAAAGGTTTTTAAAACGCATTTATTAGGGAGAGGTTTCCACACCCTTATAAAAAATGCTTCGTCCCCTTCTCCCACCGATGTGGGATCACAATCCACCCCACTTTGGGGCCCAACGTTCTCGCTGGCAATTGTTTCCCTCTCCAATCAATGTGGGATCTCACAATCCATCCCTCTACGGGGCCCGGCGTCCTCGCTGGCACTTTGCCTAGTGTCGGGCTTTGATACTATTTGTGACAGCCCAAACCCACCGCTATCAGATATTGTTCTCTTTGAGCTTTCCCCTCAAGGTTTTATAATGCGTCTATTAGGGAGATGTTTCCACACCCTTATAAGGAATGTTTCGTTCTTCTCTCATCCGATGTGGGATCTCACAATATAACTGTTGGGAGTTTGACTTATTGTGCTTGGCTGCTTGAAAACTTTTTTTGACCTCTTCATTTTATTGATTATTTGTTTTACGTTTTAGTTTCTGGAAATTTATAGGTTGCAGGAGCAATCGTGATATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGTAATGGTATAGTTATTTTCTCCTTCACAGATCACATTTTGTTCTAAGTACTATGGTTGTTTGAATTCACTTACTTGGTAACCTACTTGAATGGAGCTGAACTGAGGTAAGGTTATGATTTATGGATACAGGAATGAATCCTTCGACCATAAGAAATATTACTGTTGGAATAACGGATCAGGGGTCTGCGACAAAGTGAACTTATTCCCATAGCGAATCAACTCCTATATTCCTCGCCACTTCTTGCTTCTCCCATCCAATTGTGTAATTTCTTGGCCAATCCAACCTCACGTCCCCAAACCCATCTTCATTAACTTAAACATATTAGTTTAACTGGTTAAGATATATACTTAGACTAAGTTCTCTGATGTGGTTTATTACATTTAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTGGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAATTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGATGATTTAATCAACGCGGTCTTGAAAAACGGAGGTGCATTTTCCTAATTCTTTCGACACTTCTGGTATTAGTATTTTTCACACTGTAAACGATCATTATTCCAATTAAATTCTCTCTCACCCCGCATTAATGGGGGTGTAAACTGTGCAAGAATATGTACTAAATGAAGAATTTTAGCTATGATGGCCCTAATCATCTGATGACATGATCTATGA

mRNA sequence

CATCGACTTTTGCGAGGAAAAAATTAATAATCTTATATGGGGAAAATATTTTTCGGAATTTCCCTCGTCAAATATTGCTCGCGGGGAACCTAAACCATTTCCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGCAAAAGCGAAGCCTTCCAATCAGATTACCGGATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGATGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGATATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTGGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAATTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGATGATTTAATCAACGCGGTCTTGAAAAACGGAGGTGCATTTTCCTAATTCTTTCGACACTTCTGGTATTAGTATTTTTCACACTGTAAACGATCATTATTCCAATTAAATTCTCTCTCACCCCGCATTAATGGGGGTGTAAACTGTGCAAGAATATGTACTAAATGAAGAATTTTAGCTATGATGGCCCTAATCATCTGATGACATGATCTATGA

Coding sequence (CDS)

ATGCAAAAGCGAAGCCTTCCAATCAGATTACCGGATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGATGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGATATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTGGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAATTTAGCAAAGCCGCCTGCTTGA

Protein sequence

MQKRSLPIRLPDLFVVVMVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALRQRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKPPA
Homology
[Close]
BLAST of Cp4.1LG19g07050 vs. Swiss-Prot
Match: OPA3_SCHPO (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1703.11 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13
Identity = 49/141 (34.75%), Postives = 81/141 (57.45%), Query Frame = 1 

Query: 23  LKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQ--RRIYGHATDV 82
           LK+G+L+++TLSKP+ N +K QA  H  FR++ I FAQ  HR   ++    R      +V
Sbjct: 6   LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRITGINRAKSGGANV 65

Query: 83  EIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALRQRD 142
            +RPL++ KAV A    + E F+F+VAG  ++FE  R+ R E  + +   + +  L+   
Sbjct: 66  RLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRARRKEKNRRDEVAEAILGLQHEI 125

Query: 143 ESLSTELE---LLQQKLVELE 159
             ++  +E   +LQ+K  EL+
Sbjct: 126 VRINEIMEKQFVLQKKKNELQ 146

[Close]
BLAST of Cp4.1LG19g07050 vs. Swiss-Prot
Match: OPA3_DICDI (OPA3-like protein OS=Dictyostelium discoideum GN=DDB_G0284959 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 41/140 (29.29%), Postives = 83/140 (59.29%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LK+G+L++K+L+KPL  ++K +A+  P F   ++  A++ H++  ++ +  +   
Sbjct: 1   MVLPLLKVGSLLIKSLAKPLSKQIKIRASKSPIFHDRVVRGARLWHKLDLKLTK--FNGD 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           T  +   L+   A+    +++ E F+ SVA  ++++E  RS+  + +KE       EAL+
Sbjct: 61  TTRKPVDLNVNAAIDLGTEIVSEAFLLSVAIGLLLYETSRSSEKDKKKE-------EALQ 120

Query: 138 QRDESLSTELELLQQKLVEL 158
            R ++L  +LE+ Q+ +  L
Sbjct: 121 NRFKNLEEKLEVQQETINNL 131

[Close]
BLAST of Cp4.1LG19g07050 vs. Swiss-Prot
Match: OPA3_HUMAN (Optic atrophy 3 protein OS=Homo sapiens GN=OPA3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-08
Identity = 49/141 (34.75%), Postives = 75/141 (53.19%), Query Frame = 1 

Query: 15  VVVMVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRI 74
           +VV   P+ KL  L ++ +SKPL NR+K+ A     F+  I +  AQ+ H +  + + RI
Sbjct: 1   MVVGAFPMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRI 60

Query: 75  YGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEM 134
            G    V I+PL+EE A +   +L+GE  +F V G  ++ E  R    +  KEE +R   
Sbjct: 61  MGFRGTV-IKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAW 120

Query: 135 EALRQRDESLSTELELLQQKL 155
            ALR     L+  LE LQ ++
Sbjct: 121 NALRDEVGHLALALEALQAQV 140

[Close]
BLAST of Cp4.1LG19g07050 vs. Swiss-Prot
Match: OPA3_XENLA (Optic atrophy 3 protein homolog OS=Xenopus laevis GN=opa3 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.2e-08
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 1 

Query: 15  VVVMVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRI 74
           +VV   P+ KL  L ++ +SKPL NR+K  A     FR  + +  AQ+ H +  + + RI
Sbjct: 1   MVVGAFPIAKLLYLGIRQISKPLANRIKAGARRSEFFRTYVCLPPAQVYHWVEMRSKMRI 60

Query: 75  YGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEM 134
            G    V I+PL+E+ A +   +L+GE  +F + G  ++ E  R + +  RKEE    EM
Sbjct: 61  MGFRGAV-IKPLNEDAAAELGAELLGEAIIFLIGGGCMVAEYSRQSANSHRKEE----EM 120

Query: 135 EALRQRDESLSTELELLQQKLVELEQHAR 163
           EA   R  S+  E+  L     ELE  AR
Sbjct: 121 EA---RLGSMEAEIARLGLLTEELETRAR 141

[Close]
BLAST of Cp4.1LG19g07050 vs. Swiss-Prot
Match: OPA3_MOUSE (Optic atrophy 3 protein homolog OS=Mus musculus GN=Opa3 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 47/138 (34.06%), Postives = 71/138 (51.45%), Query Frame = 1 

Query: 15  VVVMVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRI 74
           +VV   P+ KL  L ++ +SKPL NR+K  A     F+  I +  AQ+ H +  + + RI
Sbjct: 1   MVVGAFPMAKLFYLGIRQVSKPLANRIKDAARRSEFFKTYICLPPAQLYHWVEMRTKMRI 60

Query: 75  YGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEM 134
            G      I+PL+EE A +   +L+GE  +F V G  ++ E  R    +  KEE +R   
Sbjct: 61  MGFR-GTTIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQTQQRNKEEEQRAAW 120

Query: 135 EALRQRDESLSTELELLQ 152
            AL+     L+  LE LQ
Sbjct: 121 NALQDEVGRLALALEALQ 137

[Close]
BLAST of Cp4.1LG19g07050 vs. TrEMBL
Match: A0A0A0KLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518220 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.3e-70
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ+NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQMNHRMSTQMQRRIYSHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPLDEEKAVQAAVDLIGEVFVF+VAGA+VIFEVQRSARSEARKEEVRRQE+EALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFTVAGAVVIFEVQRSARSEARKEEVRRQEIEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDESL  E+ELL+ KLVELEQ A+GRGL GILNFKH  SESGN AKP
Sbjct: 121 QRDESLVAEMELLKHKLVELEQAAKGRGLGGILNFKHANSESGNSAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. TrEMBL
Match: A0A059CE24_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00582 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-61
Identity = 129/168 (76.79%), Postives = 150/168 (89.29%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTLV+KT+SKPL +RLK+QAALHPRFR  I+ FAQ NHRM+T +QRRIYGHA
Sbjct: 1   MVLPLLKLGTLVVKTMSKPLASRLKQQAALHPRFRGLIVGFAQANHRMTTNIQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPL+E+KAVQAAVDLIGEVFVFSVAGA+VIFEVQRSA+SEARKEE RR+E+EA+R
Sbjct: 61  TDVEIRPLNEQKAVQAAVDLIGEVFVFSVAGAVVIFEVQRSAKSEARKEEKRREELEAMR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE+L  E+ELL+QKL ELEQ A+GRGLSG+ NFK   SE   +AKP
Sbjct: 121 QRDEALEKEVELLKQKLEELEQLAKGRGLSGLFNFKQAVSEDAKIAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. TrEMBL
Match: A0A067GR03_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030907mg PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-59
Identity = 125/168 (74.40%), Postives = 148/168 (88.10%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLPV+KLGTL LKTLSKP+  +LK+QAA+HPRFRQSI+  AQ NHR++T+MQRRIYGHA
Sbjct: 1   MVLPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIVGIAQANHRITTRMQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           T  EIRPL+EEKAVQAAVDLIGE+F+F+VAGA VIFEVQRSARSEARKEE+R+QE+EALR
Sbjct: 61  TGGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE L+ ELELL+QK+ ELEQ A+ RGLSGI +FKH  ++   LAKP
Sbjct: 121 QRDEGLARELELLRQKIEELEQLAKQRGLSGIFSFKHATADEAKLAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. TrEMBL
Match: V4W8W9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016976mg PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.0e-58
Identity = 124/168 (73.81%), Postives = 148/168 (88.10%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLPV+KLGTL LKTLSKP+  +LK+QAA+HPRFRQ I++ AQ NHR++T+MQRRIYGHA
Sbjct: 1   MVLPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQFIVSIAQANHRITTRMQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           T  EIRPL+EEKAVQAAVDLIGE+F+F+VAGA VIFEVQRSARSEARKEE+R+QE+EALR
Sbjct: 61  TGGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE L+ ELELL+QK+ ELEQ A+ RGLSGI +FKH  ++   LAKP
Sbjct: 121 QRDEGLARELELLRQKIEELEQLAKQRGLSGIFSFKHATADEAKLAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. TrEMBL
Match: A0A067JLZ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21496 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.0e-58
Identity = 120/168 (71.43%), Postives = 146/168 (86.90%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTL +KTLSKPL ++LK+QAA HP+FRQ I+NFAQ NHR++T MQRR+Y HA
Sbjct: 1   MVLPLLKLGTLAVKTLSKPLASKLKQQAAYHPKFRQFIVNFAQANHRLTTTMQRRLYSHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPL+EEKAVQAAVDLIGE+FVF+VAGA+VIFEVQRSA+SEARKEE RR+E+E +R
Sbjct: 61  TDVEIRPLNEEKAVQAAVDLIGELFVFTVAGAVVIFEVQRSAKSEARKEETRRRELEEMR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE L  E+E L++KL E+EQ A+GRGL GI N KH  +E+G + KP
Sbjct: 121 QRDEKLEKEVETLRRKLEEIEQLAKGRGLGGIFNLKHATAEAGKVEKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. TAIR10
Match: AT1G28510.1 (AT1G28510.1 Optic atrophy 3 protein (OPA3))

HSP 1 Score: 213.8 bits (543), Expect = 9.2e-56
Identity = 113/164 (68.90%), Postives = 137/164 (83.54%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP++KLGTL +KT+SKPL ++LK QA +HP+FRQSIINFAQ NHR++TQMQRRIYGHA
Sbjct: 1   MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPLDEEKAVQAAVDLIGE+F+F V GA+V+FEVQRS+RSEARKEE R+QE+E LR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQELEELR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGN 182
            +DE L  ++  L+ KL ELEQ A+ RGLSGI   K  P  + +
Sbjct: 121 IKDEELEKQVADLKSKLEELEQLAKARGLSGIFQLKPQPGTTAS 164

[Close]
BLAST of Cp4.1LG19g07050 vs. TAIR10
Match: AT3G58150.1 (AT3G58150.1 Optic atrophy 3 protein (OPA3))

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-37
Identity = 79/142 (55.63%), Postives = 111/142 (78.17%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTL L+T+ KP+ N+LKK+A ++P+FRQ IIN AQ NHR +T++QRR  G  
Sbjct: 12  MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQANHRFTTKLQRRASGRI 71

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TD  IRPL+EE+AVQAA DL+GE+F F+VAGA +++EVQR+AR EA+KEE R+QE+   R
Sbjct: 72  TDAVIRPLNEERAVQAAADLLGELFAFTVAGAALVYEVQRNARGEAKKEEKRQQELAEFR 131

Query: 138 QRDESLSTELELLQQKLVELEQ 160
           ++ E +  E+E ++Q+   L +
Sbjct: 132 RKHEKMENEIEEMKQRCCLLHE 153

[Close]
BLAST of Cp4.1LG19g07050 vs. NCBI nr
Match: gi|449433790|ref|XP_004134680.1| (PREDICTED: OPA3-like protein [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 6.2e-70
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ+NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQMNHRMSTQMQRRIYSHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPLDEEKAVQAAVDLIGEVFVF+VAGA+VIFEVQRSARSEARKEEVRRQE+EALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFTVAGAVVIFEVQRSARSEARKEEVRRQEIEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDESL  E+ELL+ KLVELEQ A+GRGL GILNFKH  SESGN AKP
Sbjct: 121 QRDESLVAEMELLKHKLVELEQAAKGRGLGGILNFKHANSESGNSAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. NCBI nr
Match: gi|659078577|ref|XP_008439797.1| (PREDICTED: OPA3-like protein [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 8.1e-70
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ+NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQMNHRMSTQMQRRIYSHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGA+VIFEVQRSARSEARKEEVR+QE+EALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAVVIFEVQRSARSEARKEEVRKQEIEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDESLS E+ELL+ KLVELEQ A+GRGL  ILNFKH  SESGN AKP
Sbjct: 121 QRDESLSAEVELLKHKLVELEQAAKGRGLGSILNFKHANSESGNSAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. NCBI nr
Match: gi|702318413|ref|XP_010052253.1| (PREDICTED: OPA3-like protein [Eucalyptus grandis])

HSP 1 Score: 243.0 bits (619), Expect = 4.0e-61
Identity = 129/168 (76.79%), Postives = 150/168 (89.29%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLP+LKLGTLV+KT+SKPL +RLK+QAALHPRFR  I+ FAQ NHRM+T +QRRIYGHA
Sbjct: 1   MVLPLLKLGTLVVKTMSKPLASRLKQQAALHPRFRGLIVGFAQANHRMTTNIQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           TDVEIRPL+E+KAVQAAVDLIGEVFVFSVAGA+VIFEVQRSA+SEARKEE RR+E+EA+R
Sbjct: 61  TDVEIRPLNEQKAVQAAVDLIGEVFVFSVAGAVVIFEVQRSAKSEARKEEKRREELEAMR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE+L  E+ELL+QKL ELEQ A+GRGLSG+ NFK   SE   +AKP
Sbjct: 121 QRDEALEKEVELLKQKLEELEQLAKGRGLSGLFNFKQAVSEDAKIAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. NCBI nr
Match: gi|568826710|ref|XP_006467713.1| (PREDICTED: OPA3-like protein [Citrus sinensis])

HSP 1 Score: 236.5 bits (602), Expect = 3.8e-59
Identity = 125/168 (74.40%), Postives = 148/168 (88.10%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLPV+KLGTL LKTLSKP+  +LK+QAA+HPRFRQSI+  AQ NHR++T+MQRRIYGHA
Sbjct: 1   MVLPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQSIVGIAQANHRITTRMQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           T  EIRPL+EEKAVQAAVDLIGE+F+F+VAGA VIFEVQRSARSEARKEE+R+QE+EALR
Sbjct: 61  TGGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE L+ ELELL+QK+ ELEQ A+ RGLSGI +FKH  ++   LAKP
Sbjct: 121 QRDEGLARELELLRQKIEELEQLAKQRGLSGIFSFKHATADEAKLAKP 168

[Close]
BLAST of Cp4.1LG19g07050 vs. NCBI nr
Match: gi|567914221|ref|XP_006449424.1| (hypothetical protein CICLE_v10016976mg [Citrus clementina])

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 124/168 (73.81%), Postives = 148/168 (88.10%), Query Frame = 1 

Query: 18  MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 77
           MVLPV+KLGTL LKTLSKP+  +LK+QAA+HPRFRQ I++ AQ NHR++T+MQRRIYGHA
Sbjct: 1   MVLPVVKLGTLALKTLSKPVAAKLKQQAAIHPRFRQFIVSIAQANHRITTRMQRRIYGHA 60

Query: 78  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 137
           T  EIRPL+EEKAVQAAVDLIGE+F+F+VAGA VIFEVQRSARSEARKEE+R+QE+EALR
Sbjct: 61  TGGEIRPLNEEKAVQAAVDLIGEIFIFTVAGAAVIFEVQRSARSEARKEEIRKQELEALR 120

Query: 138 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 186
           QRDE L+ ELELL+QK+ ELEQ A+ RGLSGI +FKH  ++   LAKP
Sbjct: 121 QRDEGLARELELLRQKIEELEQLAKQRGLSGIFSFKHATADEAKLAKP 168

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g07050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
OPA3_SCHPO9.1e-1334.75OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC... [more]
OPA3_DICDI1.6e-0929.29OPA3-like protein OS=Dictyostelium discoideum GN=DDB_G0284959 PE=3 SV=1[more]
OPA3_HUMAN2.3e-0834.75Optic atrophy 3 protein OS=Homo sapiens GN=OPA3 PE=1 SV=1[more]
OPA3_XENLA5.2e-0834.90Optic atrophy 3 protein homolog OS=Xenopus laevis GN=opa3 PE=2 SV=1[more]
OPA3_MOUSE2.0e-0734.06Optic atrophy 3 protein homolog OS=Mus musculus GN=Opa3 PE=1 SV=1[more]
BLAST of Cp4.1LG19g07050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLK3_CUCSA4.3e-7088.10Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518220 PE=4 SV=1[more]
A0A059CE24_EUCGR2.8e-6176.79Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00582 PE=4 SV=1[more]
A0A067GR03_CITSI2.6e-5974.40Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030907mg PE=4 SV=1[more]
V4W8W9_9ROSI1.0e-5873.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016976mg PE=4 SV=1[more]
A0A067JLZ4_JATCU5.0e-5871.43Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21496 PE=4 SV=1[more]
BLAST of Cp4.1LG19g07050 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28510.19.2e-5668.90 Optic atrophy 3 protein (OPA3)[more]
AT3G58150.11.5e-3755.63 Optic atrophy 3 protein (OPA3)[more]
BLAST of Cp4.1LG19g07050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433790|ref|XP_004134680.1|6.2e-7088.10PREDICTED: OPA3-like protein [Cucumis sativus][more]
gi|659078577|ref|XP_008439797.1|8.1e-7088.10PREDICTED: OPA3-like protein [Cucumis melo][more]
gi|702318413|ref|XP_010052253.1|4.0e-6176.79PREDICTED: OPA3-like protein [Eucalyptus grandis][more]
gi|568826710|ref|XP_006467713.1|3.8e-5974.40PREDICTED: OPA3-like protein [Citrus sinensis][more]
gi|567914221|ref|XP_006449424.1|1.4e-5873.81hypothetical protein CICLE_v10016976mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010754OPA3-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009631 cold acclimation
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0048578 positive regulation of long-day photoperiodism, flowering
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
biological_process GO:0009414 response to water deprivation
biological_process GO:0019216 regulation of lipid metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g07050.1Cp4.1LG19g07050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010754Optic atrophy 3-likePANTHERPTHR12499OPTIC ATROPHY 3 PROTEIN OPA3coord: 18..175
score: 4.5
IPR010754Optic atrophy 3-likePFAMPF07047OPA3coord: 20..143
score: 1.8
NoneNo IPR availableunknownCoilCoilcoord: 133..160
scor
NoneNo IPR availablePANTHERPTHR12499:SF2SUBFAMILY NOT NAMEDcoord: 18..175
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG19g07050Cucsa.046590Cucumber (Gy14) v1cgycpeB0039
Cp4.1LG19g07050CmaCh03G012990Cucurbita maxima (Rimu)cmacpeB667
Cp4.1LG19g07050CmaCh07G002120Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g07050CmoCh07G002130Cucurbita moschata (Rifu)cmocpeB817
Cp4.1LG19g07050CmoCh03G012960Cucurbita moschata (Rifu)cmocpeB618
Cp4.1LG19g07050Cla009654Watermelon (97103) v1cpewmB482
Cp4.1LG19g07050Csa6G518220Cucumber (Chinese Long) v2cpecuB503
Cp4.1LG19g07050MELO3C007250Melon (DHL92) v3.5.1cpemeB457
Cp4.1LG19g07050ClCG01G023360Watermelon (Charleston Gray)cpewcgB425
Cp4.1LG19g07050CSPI06G35010Wild cucumber (PI 183967)cpecpiB503
Cp4.1LG19g07050Lsi01G002780Bottle gourd (USVL1VR-Ls)cpelsiB396
Cp4.1LG19g07050MELO3C007250.2Melon (DHL92) v3.6.1cpemedB540
Cp4.1LG19g07050CsaV3_6G050490Cucumber (Chinese Long) v3cpecucB0618
Cp4.1LG19g07050Bhi03G000275Wax gourdcpewgoB0607
Cp4.1LG19g07050CsGy6G034520Cucumber (Gy14) v2cgybcpeB810
Cp4.1LG19g07050Carg07756Silver-seed gourdcarcpeB0915
Cp4.1LG19g07050Carg15319Silver-seed gourdcarcpeB0773
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g07050Cp4.1LG10g05120Cucurbita pepo (Zucchini)cpecpeB083
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g07050Silver-seed gourdcarcpeB0214
Cp4.1LG19g07050Wax gourdcpewgoB0619
Cp4.1LG19g07050Cucurbita pepo (Zucchini)cpecpeB412
Cp4.1LG19g07050Cucurbita maxima (Rimu)cmacpeB232
Cp4.1LG19g07050Cucurbita maxima (Rimu)cmacpeB437
Cp4.1LG19g07050Cucurbita moschata (Rifu)cmocpeB199
Cp4.1LG19g07050Cucurbita moschata (Rifu)cmocpeB402
Cp4.1LG19g07050Bottle gourd (USVL1VR-Ls)cpelsiB402
Cp4.1LG19g07050Watermelon (Charleston Gray)cpewcgB431
Cp4.1LG19g07050Watermelon (97103) v1cpewmB478
Cp4.1LG19g07050Melon (DHL92) v3.5.1cpemeB438
Cp4.1LG19g07050Cucumber (Gy14) v2cgybcpeB066
Cp4.1LG19g07050Melon (DHL92) v3.6.1cpemedB517