Carg07756 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07756
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Optic atrophy 3 protein (OPA3)
Location	Cucurbita_argyrosperma_scaffold_066 : 61535 .. 65309 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGGTATTTATAATTTCGTTCTGGATTTCTGCTTATGGGTTCTTGATTCTTTGGTTGTGCTTCATTATGTTGTACTGATTTATACAAGATCATGTTTCGTTGAGTTCAGCTATTGTTAATGCAGCAAATAATTCGGCGCCCCTTTCATGGACTTCTTTCAAACGTTTCTTCTGATTGGTTGGTTTTGATCATTGTTTTATGCGTTACCTTCTTCTCAAGTAGTTGTGCTTGTTGGGTCAAGAAGTTCTTCAAACTTGCCCCATTCCAAATGAAATTGCTTCGTACGACAATGAATCCTCATCTTACATGAAATTAAGAAGCTCTTCAACTTAACCCCATTTAATTTTAACTGGTAAACTTTAGAGAACGATGTTATATTATAACCAAAATCCAGCTAAAAGCAATTGCCATGTATTAAAATTTCTGAGCATTATCTGGAGATGGTCACTAGTTATCATTCTATTGGCTGGAACACTCTGACAATTTTACACAAATAGCTGTAGGTCCAAGGATGAGGATTATGTATGAATTTCATCAATTCCAAAGTTAATAAGGCCTATCTAAGAACGTAATGGAACAAATACGAGGGGCTAGCTTTAGCTGTCTTTCATCTCTTATAAAATGACCAACTGTATACTTGTCAGGACTAGCAATCTAATTGGGATCTTTTATTTATAACTTTTTTGTTTGTGTTTGGGCTAGCTAAGCTAATGAGATAACTTCTTGACCATATAATATTTTTTTGCCATGTAAACTCGATTCTAATGATGCTCATTAGAATTTAGTTGAAAGATTGCCTTCCTATTCTCTTCTTCATCGAACAATCTCTTGAGCCCGTATCTGTTTTAGAGATGAGCCTCAAATCCAATCTATCAGCTAAAAGTCTTTCCTCAAGAAAGGGCCTTAGAATGAGCAAGGAACTTGTAACAATTTCATTCTCCGAACTATGTTGGAATTCCTTGAAAGGATGCTAGGGGAAAGTTCTCTTTTCTTTAATCCGAACTAATTTTGGTGGCCCTGCTTCAACAATTGTAGCTGACTCTCGTGGTGCCAAAATACCTGTAACGACCTAGATCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACTCCAAAGAAGGATAATATCTACTAGTGGTGGGCCTGGTTCGTTACAATACCTCTCTTCTAACTTCATTTTTGTTCTTTCTCCATTTTTTTTGTTAAAAAATTTCCAAGAGTAGTAATATCCACTTAAAGCCTCAGAGGTATAAGGGGAAGAAATTTGTGAAGTAATATCCACTTTAGTTGATTGGATACTTCCAAATACTTTTCTGTCGCAGGTGTTGTGTTTCTCCTTTACAGACGTAACTTCATCAGGAATGCCAGCCATGCTATATGACAATGGAGTCTTACCTTCATTCATACATAAGCGATGAGATTTAGTTTTTCAATTATAGATGCTTTAGAAAGTATGATCCTCAAAGGGTTAGTTTGCATTGATTGTTTAAGGAGACACTTAGGTATCAGAATTAAAGTGGGTGCTTCATGTTTGAATGTATGTTTGTATACTGCTAGCTTTACTTATGAATAATTCTTAAGACCGCATTTCTTCAATGCTAAAACTGACAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTAATATTCATTTTCAAGTAGAATCGCTTCCTTTTCTTTTGGTTAAGACCATTCCTAAACTGAAACATACTATATACCATGTTACAGCAAGTATTGATCAACTATATATTTCACGGATATTTAGCATTGTATTTTGGAAACTAAGGAGCTCATTTGTGAACCATTGTGCATACTTATGATTATAAGAAAATATCAACTAAGCGCTGTTTTATTTTGGGGTTCATTTTACCTTCGATGGAATTATGCATCGATAATCTGCTCAGGTATTTGGGGTCTGGAAACCCCCAGTTGAGAATCTGAGACCTATCAGGAATACAACTCTTTGGACAAAGATGCAAGAGAAAATGTGTATATATGGAACGGCCCAAATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTATTAGGGAGAGGTTTCCACACCTTCATAAAAAATGCTACGTCCCCCTCTCCCACCGATGTGGGATCACAATCCACCCCACTTTGGGGCCCAATGTTCTCGCTGGCAATTGTTCCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCCTCTACGGGGCCCGGCGTCCTCGCTGGCACTTTGCCTAGTGTCGGGCTTTGATACTATTTGTGACAGCCCAAACCCACCGCTATCAGATATTGTCCTCTTTGAGCTTTCTCCTCAAGGTTTTATAATGCACCTGTTGGGGAGATGTTTCCACACTCTTATAAGGAATGTTTCGTTCTCCTCTCATCCAACGTGGGATCTCACAATATAACTGTTGGGAGTTTGACTTATTGTGCTTGGCTGCTTGAAAACTTTTTTTGACCTCTTCATTTTATTGATTATTTCTTTTACGTTTTAGTTTCTGGAAATTTATAGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGTAGTGGTATAGTTATTTTCTCCTGGGGCATAAGAGCACAAAACTTCACAGATCACATTTTGCTCAAAGTAGTATGGTTGTTTGAATTCACTTACTTGGTAACCTACTTGAATGGAGCTGAACTGAGGTAAGGTTATGATTTATGGATACAGGAATGAATCCTTCGACCCTAAGAAATATTACTGTTGGAATAACGGATCAGGGGTCTGCGACAAAGTGAACTCATTCCCATAGCGAATCAACTCCTATATTCCTCGCCACTTCTTGCCTCTCCCATCCAATTGTGTAATTTCTTGGCCAATCCAACCCCACGTCCCCAAACCCATCTTCATTAACTTAAACATATTAGTTTAACTGGTTAAGATATATACTTAGACTAAGTTCTCTGATGTGGTTTATTACATTTAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGGTGATGATTTAATCAACGTGGTCTTGAAAAACGGAGGTGCATTTTCCT

mRNA sequence

AATTCCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGGTGATGATTTAATCAACGTGGTCTTGAAAAACGGAGGTGCATTTTCCT

Coding sequence (CDS)

ATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGA

Protein sequence

MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA

Homology

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BLAST of Carg07756 vs. NCBI nr
Match: XP_023517385.1 (OPA3-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 2.8e-81
Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 171
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKPPA
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKPPA 170

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BLAST of Carg07756 vs. NCBI nr
Match: XP_022926359.1 (OPA3-like protein [Cucurbita moschata])

HSP 1 Score: 307.4 bits (786), Expect = 3.1e-80
Identity = 166/170 (97.65%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIIN AQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARK+EVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKDEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA 171
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKPPA
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKPPA 170

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BLAST of Carg07756 vs. NCBI nr
Match: XP_023003845.1 (OPA3-like protein [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 3.4e-79
Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIIN AQINHRMSTQMQRRIYGHA
Sbjct: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINVAQINHRMSTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIV+FEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESG+LAKP
Sbjct: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGNLAKP 168

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BLAST of Carg07756 vs. NCBI nr
Match: XP_023543237.1 (OPA3-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 2.9e-70
Identity = 149/168 (88.69%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQSNHRMSTQMQRRIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGE+FVFSVAGAIV+FEVQRSARSEARKEEVRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGELFVFSVAGAIVIFEVQRSARSEARKEEVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESL  E+ELL+ KLVELE+HARGRGL GILNFKH  SESG+ AKP
Sbjct: 121 QRDESLLAEMELLKHKLVELEEHARGRGLGGILNFKHAHSESGNSAKP 168

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BLAST of Carg07756 vs. NCBI nr
Match: XP_022978773.1 (OPA3-like protein [Cucurbita maxima])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 147/168 (87.50%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQSNHRMSTQMQRRIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGE+FVFSVAG IV+FEVQRSARSEARKE+VRRQEMEALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGELFVFSVAGVIVIFEVQRSARSEARKEDVRRQEMEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESL  E+ELL+ KLVELE+HARGRGL GILNFKH  SESG+ AKP
Sbjct: 121 QRDESLLVEMELLKHKLVELEEHARGRGLGGILNFKHAHSESGNSAKP 168

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BLAST of Carg07756 vs. TAIR10
Match: AT1G28510.1 (Optic atrophy 3 protein (OPA3))

HSP 1 Score: 188.3 bits (477), Expect = 3.8e-48
Identity = 106/164 (64.63%), Postives = 123/164 (75.00%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP++KLGTL +KT+SKPL ++LK QA +HP+FRQSIINFAQ NHR++TQMQRRIYGHA
Sbjct: 1   MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGE+F+F V GA+VVFEVQRS+RSEARK          LR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKXXXXXXXXXXLR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGS 165
                       L+ KL ELEQ A+ RGLSGI   K  P  + S
Sbjct: 121 XXXXXXXXXXADLKSKLEELEQLAKARGLSGIFQLKPQPGTTAS 164

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BLAST of Carg07756 vs. TAIR10
Match: AT3G58150.1 (Optic atrophy 3 protein (OPA3))

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-37
Identity = 79/142 (55.63%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL L+T+ KP+ N+LKK+A ++P+FRQ IIN AQ NHR +T++QRR  G  
Sbjct: 12  MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQANHRFTTKLQRRASGRI 71

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TD  IRPL+EE+AVQAA DL+GE+F F+VAGA +V+EVQR+AR EA+KEE R+QE+   R
Sbjct: 72  TDAVIRPLNEERAVQAAADLLGELFAFTVAGAALVYEVQRNARGEAKKEEKRQQELAEFR 131

Query: 121 QRDESLSTELELLQQKLVELEQ 143
           ++   +  E+E ++Q+   L +
Sbjct: 132 RKHXXMENEIEEMKQRCCLLHE 153

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BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q9P7W0|OPA3_SCHPO (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1703.11 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 6   LKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQ--RRIYGHATDV 65
           LK+G+L+++TLSKP+ N +K QA  H  FR++ I FAQ  HR   ++    R      +V
Sbjct: 6   LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRITGINRAKSGGANV 65

Query: 66  EIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEM-EALRQR 125
            +RPL++ KAV A    + E F+F+VAG  ++FE  R+     RKE+ RR E+ EA+   
Sbjct: 66  RLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRA----RRKEKNRRDEVAEAILGL 125

Query: 126 DESLSTELELLQQKLV 139
              +    E+++++ V
Sbjct: 126 QHEIVRINEIMEKQFV 137

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BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q9H6K4|OPA3_HUMAN (Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08
Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 4   PVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRIYGHATD 63
           P+ KL  L ++ +SKPL NR+K+ A     F+  I +  AQ+ H +  + + RI G    
Sbjct: 7   PMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGFRGT 66

Query: 64  VEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQR 123
           V I+PL+EE A +   +L+GE  +F V G  +V E  R    +  KEE +R    ALR  
Sbjct: 67  V-IKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWNALRDE 126

Query: 124 DESLSTELELLQQKL 138
              L+  LE LQ ++
Sbjct: 127 VGHLALALEALQAQV 140

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BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q54NW1|OPA3_DICDI (OPA3-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284959 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-08
Identity = 34/119 (28.57%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LK+G+L++K+L+KPL  ++K +A+  P F   ++  A++ H++  ++ +  +   
Sbjct: 1   MVLPLLKVGSLLIKSLAKPLSKQIKIRASKSPIFHDRVVRGARLWHKLDLKLTK--FNGD 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEAL 120
           T  +   L+   A+    +++ E F+ SVA  ++++E  RS+  + +KEE  +   + L
Sbjct: 61  TTRKPVDLNVNAAIDLGTEIVSEAFLLSVAIGLLLYETSRSSEKDKKKEEALQNRFKNL 117

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BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q641S2|OPA3_XENLA (Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-08
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 4   PVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRIYGHATD 63
           P+ KL  L ++ +SKPL NR+K  A     FR  + +  AQ+ H +  + + RI G    
Sbjct: 7   PIAKLLYLGIRQISKPLANRIKAGARRSEFFRTYVCLPPAQVYHWVEMRSKMRIMGFRGA 66

Query: 64  VEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQR 123
           V I+PL+E+ A +   +L+GE  +F + G  +V E  R + +  RKEE    EMEA   R
Sbjct: 67  V-IKPLNEDAAAELGAELLGEAIIFLIGGGCMVAEYSRQSANSHRKEE----EMEA---R 126

Query: 124 DESLSTELELLQQKLVELEQHAR 146
             S+  E+  L     ELE  AR
Sbjct: 127 LGSMEAEIARLGLLTEELETRAR 141

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BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q505D7|OPA3_MOUSE (Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 4   PVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSI-INFAQINHRMSTQMQRRIYGHATD 63
           P+ KL  L ++ +SKPL NR+K  A     F+  I +  AQ+ H +  + + RI G    
Sbjct: 7   PMAKLFYLGIRQVSKPLANRIKDAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGF-RG 66

Query: 64  VEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQR 123
             I+PL+EE A +   +L+GE  +F V G  +V E  R    +  KEE +R    AL+  
Sbjct: 67  TTIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQTQQRNKEEEQRAAWNALQDE 126

Query: 124 DESLSTELELLQ 135
              L+  LE LQ
Sbjct: 127 VGRLALALEALQ 137

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BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A0A0KLK3|A0A0A0KLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518220 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.7e-69
Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ+NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQMNHRMSTQMQRRIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVF+VAGA+V+FEVQRSARSEARKEEVRRQE+EALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFTVAGAVVIFEVQRSARSEARKEEVRRQEIEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESL  E+ELL+ KLVELEQ A+GRGL GILNFKH  SESG+ AKP
Sbjct: 121 QRDESLVAEMELLKHKLVELEQAAKGRGLGGILNFKHANSESGNSAKP 168

[Close]

BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A1S3B0B3|A0A1S3B0B3_CUCME (OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103484486 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.1e-69
Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN AQ+NHRMSTQMQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQMNHRMSTQMQRRIYSHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGA+V+FEVQRSARSEARKEEVR+QE+EALR
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAVVIFEVQRSARSEARKEEVRKQEIEALR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDESLS E+ELL+ KLVELEQ A+GRGL  ILNFKH  SESG+ AKP
Sbjct: 121 QRDESLSAEVELLKHKLVELEQAAKGRGLGSILNFKHANSESGNSAKP 168

[Close]

BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A1Q3CA53|A0A1Q3CA53_CEPFO (OPA3 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20450 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61
Identity = 129/168 (76.79%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKP+ NRLK QAALHPRFRQ IINFAQ NHR ST+MQRRIY HA
Sbjct: 1   MVLPLLKLGTLALKTLSKPVANRLKHQAALHPRFRQLIINFAQANHRFSTRMQRRIYAHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPL+EEKAVQAAVDLIGEVFVF+VAGA V+FEV RSARSEA+KEE+R+QE+EA+R
Sbjct: 61  TDVEIRPLNEEKAVQAAVDLIGEVFVFTVAGAAVIFEVHRSARSEAKKEEIRKQELEAMR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDE+L+ E+E+L++KL ELEQ ARGRGL GILNF+H  ++ G + KP
Sbjct: 121 QRDETLAREVEILKKKLEELEQLARGRGLGGILNFRHANADEGKVPKP 168

[Close]

BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A2C9U5C4|A0A2C9U5C4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G050700 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.4e-58
Identity = 122/168 (72.62%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL +KTLSKPL ++LK+QAA HP+FRQ IINFAQ NHR++T+MQRRIY H+
Sbjct: 1   MVLPLLKLGTLAVKTLSKPLASKLKQQAAFHPKFRQLIINFAQANHRLTTRMQRRIYSHS 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPL+EEKAVQAAVDLIGE+FVF+VAG +V+FEVQRSA+SEARKEEVRRQE EA+R
Sbjct: 61  TDVEIRPLNEEKAVQAAVDLIGELFVFTVAGGVVIFEVQRSAKSEARKEEVRRQEFEAMR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKP 169
           QRDE LS E+E+L+ KL E+EQ A+GRGL+GI +FKH+ + +G + KP
Sbjct: 121 QRDEELSKEVEILKHKLEEIEQLAKGRGLAGIFHFKHS-NTAGEVGKP 167

[Close]

BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A1S3VHW5|A0A1S3VHW5_VIGRR (OPA3-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106775354 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57
Identity = 121/167 (72.46%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHA 60
           MVLP+LKLGTL LKTLSKP+ +RLK+QAALHPRFRQ I+N AQ NH+++T+MQRRIYGHA
Sbjct: 1   MVLPLLKLGTLALKTLSKPVASRLKQQAALHPRFRQLIVNMAQTNHQITTRMQRRIYGHA 60

Query: 61  TDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALR 120
           TDVEIRPL+EEKAVQAAVDLIGE+FVFSVAG +++FEVQRS+RSEARKEE+R+QE+EA+R
Sbjct: 61  TDVEIRPLNEEKAVQAAVDLIGELFVFSVAGVLLIFEVQRSSRSEARKEELRKQELEAVR 120

Query: 121 QRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAK 168
           Q+ E+L+ E+ELL+Q++ ELEQ ARGRGL+GILNF+   +E G   K
Sbjct: 121 QKHENLAEEVELLKQRIQELEQMARGRGLTGILNFRQGNTEIGKAEK 167

The following BLAST results are available for this feature:

BLAST of Carg07756 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517385.1	2.8e-81	98.82	OPA3-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022926359.1	3.1e-80	97.65	OPA3-like protein [Cucurbita moschata]	[more]
XP_023003845.1	3.4e-79	98.21	OPA3-like protein [Cucurbita maxima]	[more]
XP_023543237.1	2.9e-70	88.69	OPA3-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022978773.1	1.9e-69	87.50	OPA3-like protein [Cucurbita maxima]	[more]

BLAST of Carg07756 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28510.1	3.8e-48	64.63	Optic atrophy 3 protein (OPA3)	[more]
AT3G58150.1	6.7e-37	55.63	Optic atrophy 3 protein (OPA3)	[more]

BLAST of Carg07756 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9P7W0\|OPA3_SCHPO	1.4e-12	36.76	OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848...	[more]
sp\|Q9H6K4\|OPA3_HUMAN	2.1e-08	35.56	Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1	[more]
sp\|Q54NW1\|OPA3_DICDI	3.7e-08	28.57	OPA3-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284959 PE=3 SV=1	[more]
sp\|Q641S2\|OPA3_XENLA	6.2e-08	35.66	Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1	[more]
sp\|Q505D7\|OPA3_MOUSE	2.4e-07	34.85	Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1	[more]

BLAST of Carg07756 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLK3\|A0A0A0KLK3_CUCSA	4.7e-69	86.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518220 PE=4 SV=1	[more]
tr\|A0A1S3B0B3\|A0A1S3B0B3_CUCME	6.1e-69	86.90	OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103484486 PE=4 SV=1	[more]
tr\|A0A1Q3CA53\|A0A1Q3CA53_CEPFO	1.2e-61	76.79	OPA3 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_204...	[more]
tr\|A0A2C9U5C4\|A0A2C9U5C4_MANES	6.4e-58	72.62	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G050700 PE=4 SV=...	[more]
tr\|A0A1S3VHW5\|A0A1S3VHW5_VIGRR	1.9e-57	72.46	OPA3-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106775354 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010754	OPA3-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07756-RA	Carg07756-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..170
None	No IPR available	PANTHER	PTHR12499:SF7	SUBFAMILY NOT NAMED	coord: 1..166
IPR010754	Optic atrophy 3-like	PFAM	PF07047	OPA3	coord: 3..126 e-value: 3.4E-42 score: 143.1
IPR010754	Optic atrophy 3-like	PANTHER	PTHR12499	OPTIC ATROPHY 3 PROTEIN OPA3	coord: 1..166

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07756	Cla009654	Watermelon (97103) v1	carwmB0642
Carg07756	Csa6G518220	Cucumber (Chinese Long) v2	carcuB0663
Carg07756	MELO3C007250	Melon (DHL92) v3.5.1	carmeB0642
Carg07756	ClCG01G023360	Watermelon (Charleston Gray)	carwcgB0623
Carg07756	CSPI06G35010	Wild cucumber (PI 183967)	carcpiB0672
Carg07756	Cucsa.046590	Cucumber (Gy14) v1	carcgyB0714
Carg07756	CmaCh03G012990	Cucurbita maxima (Rimu)	carcmaB0913
Carg07756	CmoCh03G012960	Cucurbita moschata (Rifu)	carcmoB0887
Carg07756	CmoCh07G002130	Cucurbita moschata (Rifu)	carcmoB0888
Carg07756	Lsi01G002780	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07756	Cp4.1LG19g07050	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07756	Cp4.1LG10g05120	Cucurbita pepo (Zucchini)	carcpeB0912
Carg07756	CsGy6G034520	Cucumber (Gy14) v2	carcgybB0640
Carg07756	MELO3C007250.2	Melon (DHL92) v3.6.1	carmedB0652
Carg07756	CsaV3_6G050490	Cucumber (Chinese Long) v3	carcucB0674
Carg07756	Cla97C01G023220	Watermelon (97103) v2	carwmbB0669
Carg07756	Bhi03G000275	Wax gourd	carwgoB0759

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07756	Carg15319	Silver-seed gourd	carcarB507

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07756	Silver-seed gourd	carcarB175
Carg07756	Cucumber (Gy14) v2	carcgybB0638
Carg07756	Cucumber (Gy14) v1	carcgyB0716
Carg07756	Cucurbita maxima (Rimu)	carcmaB0906
Carg07756	Cucurbita maxima (Rimu)	carcmaB0908
Carg07756	Cucurbita maxima (Rimu)	carcmaB0914
Carg07756	Cucurbita moschata (Rifu)	carcmoB0882
Carg07756	Cucurbita moschata (Rifu)	carcmoB0883
Carg07756	Cucurbita pepo (Zucchini)	carcpeB0911
Carg07756	Cucurbita pepo (Zucchini)	carcpeB0916
Carg07756	Wild cucumber (PI 183967)	carcpiB0670
Carg07756	Cucumber (Chinese Long) v2	carcuB0661
Carg07756	Cucumber (Chinese Long) v3	carcucB0672
Carg07756	Bottle gourd (USVL1VR-Ls)	carlsiB586
Carg07756	Melon (DHL92) v3.5.1	carmeB0639
Carg07756	Melon (DHL92) v3.6.1	carmedB0648
Carg07756	Watermelon (Charleston Gray)	carwcgB0625
Carg07756	Watermelon (97103) v1	carwmB0640
Carg07756	Watermelon (97103) v2	carwmbB0671