Carg07756 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGGTATTTATAATTTCGTTCTGGATTTCTGCTTATGGGTTCTTGATTCTTTGGTTGTGCTTCATTATGTTGTACTGATTTATACAAGATCATGTTTCGTTGAGTTCAGCTATTGTTAATGCAGCAAATAATTCGGCGCCCCTTTCATGGACTTCTTTCAAACGTTTCTTCTGATTGGTTGGTTTTGATCATTGTTTTATGCGTTACCTTCTTCTCAAGTAGTTGTGCTTGTTGGGTCAAGAAGTTCTTCAAACTTGCCCCATTCCAAATGAAATTGCTTCGTACGACAATGAATCCTCATCTTACATGAAATTAAGAAGCTCTTCAACTTAACCCCATTTAATTTTAACTGGTAAACTTTAGAGAACGATGTTATATTATAACCAAAATCCAGCTAAAAGCAATTGCCATGTATTAAAATTTCTGAGCATTATCTGGAGATGGTCACTAGTTATCATTCTATTGGCTGGAACACTCTGACAATTTTACACAAATAGCTGTAGGTCCAAGGATGAGGATTATGTATGAATTTCATCAATTCCAAAGTTAATAAGGCCTATCTAAGAACGTAATGGAACAAATACGAGGGGCTAGCTTTAGCTGTCTTTCATCTCTTATAAAATGACCAACTGTATACTTGTCAGGACTAGCAATCTAATTGGGATCTTTTATTTATAACTTTTTTGTTTGTGTTTGGGCTAGCTAAGCTAATGAGATAACTTCTTGACCATATAATATTTTTTTGCCATGTAAACTCGATTCTAATGATGCTCATTAGAATTTAGTTGAAAGATTGCCTTCCTATTCTCTTCTTCATCGAACAATCTCTTGAGCCCGTATCTGTTTTAGAGATGAGCCTCAAATCCAATCTATCAGCTAAAAGTCTTTCCTCAAGAAAGGGCCTTAGAATGAGCAAGGAACTTGTAACAATTTCATTCTCCGAACTATGTTGGAATTCCTTGAAAGGATGCTAGGGGAAAGTTCTCTTTTCTTTAATCCGAACTAATTTTGGTGGCCCTGCTTCAACAATTGTAGCTGACTCTCGTGGTGCCAAAATACCTGTAACGACCTAGATCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACTCCAAAGAAGGATAATATCTACTAGTGGTGGGCCTGGTTCGTTACAATACCTCTCTTCTAACTTCATTTTTGTTCTTTCTCCATTTTTTTTGTTAAAAAATTTCCAAGAGTAGTAATATCCACTTAAAGCCTCAGAGGTATAAGGGGAAGAAATTTGTGAAGTAATATCCACTTTAGTTGATTGGATACTTCCAAATACTTTTCTGTCGCAGGTGTTGTGTTTCTCCTTTACAGACGTAACTTCATCAGGAATGCCAGCCATGCTATATGACAATGGAGTCTTACCTTCATTCATACATAAGCGATGAGATTTAGTTTTTCAATTATAGATGCTTTAGAAAGTATGATCCTCAAAGGGTTAGTTTGCATTGATTGTTTAAGGAGACACTTAGGTATCAGAATTAAAGTGGGTGCTTCATGTTTGAATGTATGTTTGTATACTGCTAGCTTTACTTATGAATAATTCTTAAGACCGCATTTCTTCAATGCTAAAACTGACAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTAATATTCATTTTCAAGTAGAATCGCTTCCTTTTCTTTTGGTTAAGACCATTCCTAAACTGAAACATACTATATACCATGTTACAGCAAGTATTGATCAACTATATATTTCACGGATATTTAGCATTGTATTTTGGAAACTAAGGAGCTCATTTGTGAACCATTGTGCATACTTATGATTATAAGAAAATATCAACTAAGCGCTGTTTTATTTTGGGGTTCATTTTACCTTCGATGGAATTATGCATCGATAATCTGCTCAGGTATTTGGGGTCTGGAAACCCCCAGTTGAGAATCTGAGACCTATCAGGAATACAACTCTTTGGACAAAGATGCAAGAGAAAATGTGTATATATGGAACGGCCCAAATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTATTAGGGAGAGGTTTCCACACCTTCATAAAAAATGCTACGTCCCCCTCTCCCACCGATGTGGGATCACAATCCACCCCACTTTGGGGCCCAATGTTCTCGCTGGCAATTGTTCCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCCTCTACGGGGCCCGGCGTCCTCGCTGGCACTTTGCCTAGTGTCGGGCTTTGATACTATTTGTGACAGCCCAAACCCACCGCTATCAGATATTGTCCTCTTTGAGCTTTCTCCTCAAGGTTTTATAATGCACCTGTTGGGGAGATGTTTCCACACTCTTATAAGGAATGTTTCGTTCTCCTCTCATCCAACGTGGGATCTCACAATATAACTGTTGGGAGTTTGACTTATTGTGCTTGGCTGCTTGAAAACTTTTTTTGACCTCTTCATTTTATTGATTATTTCTTTTACGTTTTAGTTTCTGGAAATTTATAGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGTAGTGGTATAGTTATTTTCTCCTGGGGCATAAGAGCACAAAACTTCACAGATCACATTTTGCTCAAAGTAGTATGGTTGTTTGAATTCACTTACTTGGTAACCTACTTGAATGGAGCTGAACTGAGGTAAGGTTATGATTTATGGATACAGGAATGAATCCTTCGACCCTAAGAAATATTACTGTTGGAATAACGGATCAGGGGTCTGCGACAAAGTGAACTCATTCCCATAGCGAATCAACTCCTATATTCCTCGCCACTTCTTGCCTCTCCCATCCAATTGTGTAATTTCTTGGCCAATCCAACCCCACGTCCCCAAACCCATCTTCATTAACTTAAACATATTAGTTTAACTGGTTAAGATATATACTTAGACTAAGTTCTCTGATGTGGTTTATTACATTTAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGGTGATGATTTAATCAACGTGGTCTTGAAAAACGGAGGTGCATTTTCCT AATTCCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCCATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGATTAAGTTGCTAGTTTGTCCAGCGAGAAATGTGGTGATGATTTAATCAACGTGGTCTTGAAAAACGGAGGTGCATTTTCCT ATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTCGCCCAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGGTATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGAAGAAGTACGCAGACAAGAAATGGAGGCACTGAGGCAGAGAGACGAAAGCTTATCAACAGAATTGGAACTTCTGCAGCAAAAACTAGTAGAACTGGAACAACATGCCAGAGGACGAGGTCTCAGTGGTATTTTGAACTTCAAACACACTCCCTCTGAAAGTGGAAGTTTAGCAAAGCCGCCTGCTTGA MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINFAQINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVVFEVQRSARSEARKEEVRRQEMEALRQRDESLSTELELLQQKLVELEQHARGRGLSGILNFKHTPSESGSLAKPPA
BLAST of Carg07756 vs. NCBI nr
Match: XP_023517385.1 (OPA3-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.8 bits (795), Expect = 2.8e-81 Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of Carg07756 vs. NCBI nr
Match: XP_022926359.1 (OPA3-like protein [Cucurbita moschata]) HSP 1 Score: 307.4 bits (786), Expect = 3.1e-80 Identity = 166/170 (97.65%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of Carg07756 vs. NCBI nr
Match: XP_023003845.1 (OPA3-like protein [Cucurbita maxima]) HSP 1 Score: 303.9 bits (777), Expect = 3.4e-79 Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg07756 vs. NCBI nr
Match: XP_023543237.1 (OPA3-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274.2 bits (700), Expect = 2.9e-70 Identity = 149/168 (88.69%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Carg07756 vs. NCBI nr
Match: XP_022978773.1 (OPA3-like protein [Cucurbita maxima]) HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69 Identity = 147/168 (87.50%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Carg07756 vs. TAIR10
Match: AT1G28510.1 (Optic atrophy 3 protein (OPA3)) HSP 1 Score: 188.3 bits (477), Expect = 3.8e-48 Identity = 106/164 (64.63%), Postives = 123/164 (75.00%), Query Frame = 0
BLAST of Carg07756 vs. TAIR10
Match: AT3G58150.1 (Optic atrophy 3 protein (OPA3)) HSP 1 Score: 151.0 bits (380), Expect = 6.7e-37 Identity = 79/142 (55.63%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q9P7W0|OPA3_SCHPO (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1703.11 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12 Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = 0
BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q9H6K4|OPA3_HUMAN (Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08 Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q54NW1|OPA3_DICDI (OPA3-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284959 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.7e-08 Identity = 34/119 (28.57%), Postives = 71/119 (59.66%), Query Frame = 0
BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q641S2|OPA3_XENLA (Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.2e-08 Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of Carg07756 vs. Swiss-Prot
Match: sp|Q505D7|OPA3_MOUSE (Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0
BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A0A0KLK3|A0A0A0KLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518220 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 4.7e-69 Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A1S3B0B3|A0A1S3B0B3_CUCME (OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103484486 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 6.1e-69 Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A1Q3CA53|A0A1Q3CA53_CEPFO (OPA3 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20450 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61 Identity = 129/168 (76.79%), Postives = 150/168 (89.29%), Query Frame = 0
BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A2C9U5C4|A0A2C9U5C4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G050700 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 6.4e-58 Identity = 122/168 (72.62%), Postives = 150/168 (89.29%), Query Frame = 0
BLAST of Carg07756 vs. TrEMBL
Match: tr|A0A1S3VHW5|A0A1S3VHW5_VIGRR (OPA3-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106775354 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57 Identity = 121/167 (72.46%), Postives = 150/167 (89.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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