Cp4.1LG19g00300 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG19g00300
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLycopene beta-cyclase
LocationCp4.1LG19 : 221987 .. 226224 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACGGTGGGTGGAAATTGGGGACGGCGGTGGTGGAGATGAAGGGATCGCCGGAGAGAAAGAAGCTTGAGCATTTGATGGTGTCTGGTGGAGTGGGTTAAGATCGATTCTTCCCGTGCTTATACAGAAAAAGGTCTGTAAACGAATTGAATTGACCAGTTGGTAGCCGAAATTGGAGTTGGAGGATTTGGAGACTTGGGGGAGAAAGAGACAACAGGTATGTATGCGCTTATGGCAATGCGTCTGTTTTAAATGGATATTCAGACTTAATTATATATTTAAAGCTAAATTAATAAAAATACTTCTATCCCACATCGGAAATTGCCTAATAAGAGTAAGCCTATTTAACTTAGCAGATGAAGGCATCAGGTCACGACCTTACTTGAACAGGATCTGTTCTATAGGTTGTACAACTGTGTCCTTGAGTATTAAGGAGACAAGAACTAAAGTCTGGTGGATGAACCACTGCTGTGCGACTAGAGCGTGACTAACGGCATACGGCCCTTTGGTCCTGCGGCTGTAGATGATCGTTCTTCGGTAGGTTCGCCCTGCCTGGGATGGTCGCACGGCGGTCTGACAGACTCAAAAAAACCTCTTTTTTATTTTTCGTTTTTTTCTTTTTGCTTTTTGAATCTGGAATGTGGGCTGTGATGGAAGAAACCCTTTGTTTTGTGCGTGAAATCGTAGGGATTTGGGTGGTTTGAATGATTAGAAGTATCGGCGTTCTTCTTTCTTGTTCCGTGTTTATTGAGATTTTGGGATGAATTTACGTTTTGAGTTATGGGAATGGTGGAGAATATAATATGTATCCACTCCGCTTGATGCTCCTTACCTGTTTGATGAAATGCCTCACACAAACCTGCTGCACTTCCTTTCTTCATCTTCTTCTTCAGAGTGAAGGTTATCATTAAATTCTCTTCTGTTCAAACATGCCACCACCCTGTTTCAAATGGGTCTCTCTCTGGGTTTGCTAAACAATGGGCATCCAATTTTCATGAGGCAGTTGAGAGCTTTTGCTTTTGCTTTTGCTTTTAAACCCAATGAAGGCTACTTCATGTCATCATCGGCAACACAACTACACTTACATCCTAATAATTTGATCGTTACTTAAATGATGCACACAACTTATAATCGTTCGCATAAAAATGTATATAATCCTTAGTTGTATCACTTTATTGCTTTCTTTTACTACTTTCATGATGTATAGTTTATGTATTGTATTTTCTAAGTGTATGACGGTTCGATAGAATCATGTCTACGCTTGCCTGGTAGACATGGAATGCCATATAATGTACTACTGTGTAAGGGATGCAACCCGTTGTCAACTCCTCCCACTTAGATTTTGTATGACCATTCGGCTGAATCACGTCTAGGCCTACCAGACCTTAATTGACTCAAAATGTACTAAAACGGGGATGCGACTATAGGCTTGAGCATAGGTTGTTCTGTCACCTTAAGCGACACCATTGCATCGTGTGAGAATTAAATGCACCATTAACTAATTAATTATTGTTGTTGTCGACTGTCTTGTCTTGTTTACTTTTCCCGACTTTGTTTTAATGACGTAATCAGAATTAAAGAGGAATCATCTTGGAGAGTACACTAAATCTAAAACTAGAACAGCCACCATTGTCAAACTCTTTTTAAGCAATGGAGACATCAAATTGAGCAAGCGATATTCACTCCTATTATCACCGCCATTAATTGGCAAGTATGGGGCCATGCCCCAAGTGGGGACACGCCCAAATCCCCAATCTTCTCCAATTCCTCTAATTTCCATCTCTTGGAGAAGAGTGGACGGCAGCGTCAGTTCATCAATTGGCCACTGGCCACACGCATTCCACATCTCTCCAATCCACTGGAACCGAATGGAGCTCCTTCCGCCTCCTCAGGTTCGCCTCAAAACACACGCATCTTAATCTTTAACACCGATTTCCATTGAATTTATCCTGTTTCTTGTTCAGTTCTTGAGGGTTTCTTGAAATTTTTGAAAACCCCTTTTCGATTCCTCGTTTTACTGCTTATACTTGCTTGAGATTTCTGGATATTGGGTTTCTGTGGGGATTCCCTGAAAATTCTGCTTGTGGTTGCCCTGTTCAGTGTATTTTGTTTAGGGTTTTGGGAGTTTTGTGCTGAAAACCATGGATTCTTTGCTTAAAATCAATACCAAATATGGTTTTATGCAACCATTACATGGGGTTTCTGAAAAGTTGAATGGTTTGAGGAGTACAAAGTTTCATAAGATTCAAAGGAAAAAAGGGGGTTGTGTCAATGTGAGAAGCAGCGCTCTTTTGGAGCTTGTTCCTGAGGCCAAGAAGGAGACTCTTGAGGTTGAGCTTCCCATTTACGATCCGTCGAGAGGCCTCGTCGTCGATCTTGCAGTTGTGGGAGGTGGCCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCAGAGGCAGGGCTTTCAGTTTGTTCAATTGATCCATCTCCCAAGTTGATTTGGCCTAACAATTATGGAGTTTGGGTGGATGAGTTCGAGGCAATGGATTTGCTCGACTGTCTCGACACGACATGGTCCGGTGCTGTCGTGTTCACGAATGAACAATCGACGAAAGATCTTGGTCGGCCTTATGGGAGGGTTAATAGAAAGCAGCTTAAGTCAAAAATGTTGCAAAAGTGCATTGCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTGTTAAAGTTATACATGAGGAGTTTAAATCTTTGTTAATTTGTAATGATGGTGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTCGTTCGATACGATAAGCCTTACAATCCAGGCTACCAAGTAGCATACGGGATTTTAGCCGAGGTCGAGGAACATCCGTTCGATGTTGACAAGATGGTGTTTATGGACTGGAGGGATTCACATTTGGATAACAATATGGTTTTGAAGGAGAGAAATAGCAAAATTCCCACATTTCTTTATGCGATGCCCTTTTCGTCGAATCGAATATTTCTCGAAGAAACTTCTTTGGTAGCTCGACCGGGACTACAGATGAGCGATATCCAGGAAAGAATGGATGCAAGATTGAAGCACTTAGGCATAAAAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGTGGACAACTGCCTGTTCTTCCTCAAAGAGTCGTTGGAATCGGAGGAACGGCGGGGATGGTGCACCCTTCGACGGGATATATTGATATGAACCAAGAGACTCAATCATACAATATACTTCAATGAAGATGTGAAGAAAAGGTTGTCAAAATTATCAAAGGATGTTTCAACTCATGCTACATTGAAGAAGAATGAAGTTTGATTGTTGTAAATTTTGGGTGGGTTACAATTTAGAGTAATTTAGATTTATTGTATTTTTAGGTTACATTTACATAATGGCTCATTATGGCCATTAAGTATAAATGTTACACCTCTTGGAATGCCTTTAGTAGTTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAAGGTAGACTTGGAAAATATAGAAAGAAGCATTTGTGCTTTTCTTTAGCCAATGGCTAAGTTTCTTTGCAATTCTATGTAGTTTAGATTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAGTGTTTGAGATATTTGATCAACAAGAATCATTGAAGCTAGACATGATCGATTTTGCTTCTGGAGTGATTCGAATCTCAAACAAAGTGTTCTTGGCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTAGTGATTCCTTATCTTATCATATATGGTAGCAAGAACTCTAGCAGCAGCACCTATTGTTGCCAGTGCAATAGTTCGGTGTCTTGGTTCGGATGGACGTTTCAGGGGAGACGAGATATCGTCTGAAGTTTGGGGAGATTTATGGCCTATCGAACGGAGGAGGCAGAGGGAGTTTTTCTGTTTCGGGATGGATATCTTGTTGAAGCTTGATCTAAAGGGAACAAGAAGGTTTTTTGATGCATTTTTCGATCTTGAACCTCGTTATTGGCACGGTTTTTTGTCGTCTCGACTGTTCCTTCCCGAGCTGTTACTCTTTGGACTTTCCTTATTCTCGCACGCATCGAATGCCTCTCGGATTGAAATCATGGCAAAAGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTCGTAAAGGATAGAGACTAA

mRNA sequence

ATGGCGACGTTGGTAGCCGAAATTGGAGTTGGAGGATTTGGAGACTTGGGGGAGAAAGAGACAACAGAATTAAAGAGGAATCATCTTGGAGAGTACACTAAATCTAAAACTAGAACAGCCACCATTGTCAAACTCTTTTTAAGCAATGGAGACATCAAATTGAGCAAGCGATATTCACTCCTATTATCACCGCCATTAATTGGCAAGTATGGGGCCATGCCCCAAGTGGGGACACGCCCAAATCCCCAATCTTCTCCAATTCCTCTAATTTCCATCTCTTGGAGAAGAGTGGACGGCAGCGTCAGTTCATCAATTGGCCACTGGCCACACGCATTCCACATCTCTCCAATCCACTGGAACCGAATGGAGCTCCTTCCGCCTCCTCAGGGTTTTGGGAGTTTTGTGCTGAAAACCATGGATTCTTTGCTTAAAATCAATACCAAATATGGTTTTATGCAACCATTACATGGGGTTTCTGAAAAGTTGAATGGTTTGAGGAGTACAAAGTTTCATAAGATTCAAAGGAAAAAAGGGGGTTGTGTCAATGTGAGAAGCAGCGCTCTTTTGGAGCTTGTTCCTGAGGCCAAGAAGGAGACTCTTGAGGTTGAGCTTCCCATTTACGATCCGTCGAGAGGCCTCGTCGTCGATCTTGCAGTTGTGGGAGGTGGCCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCAGAGGCAGGGCTTTCAGTTTGTTCAATTGATCCATCTCCCAAGTTGATTTGGCCTAACAATTATGGAGTTTGGGTGGATGAGTTCGAGGCAATGGATTTGCTCGACTGTCTCGACACGACATGGTCCGGTGCTGTCGTGTTCACGAATGAACAATCGACGAAAGATCTTGGTCGGCCTTATGGGAGGGTTAATAGAAAGCAGCTTAAGTCAAAAATGTTGCAAAAGTGCATTGCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTGTTAAAGTTATACATGAGGAGTTTAAATCTTTGTTAATTTGTAATGATGGTGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTCGTTCGATACGATAAGCCTTACAATCCAGGCTACCAAGTAGCATACGGGATTTTAGCCGAGGTCGAGGAACATCCGTTCGATGTTGACAAGATGGTGTTTATGGACTGGAGGGATTCACATTTGGATAACAATATGGTTTTGAAGGAGAGAAATAGCAAAATTCCCACATTTCTTTATGCGATGCCCTTTTCGTCGAATCGAATATTTCTCGAAGAAACTTCTTTGGTAGCTCGACCGGGACTACAGATGAGCGATATCCAGGAAAGAATGGATGCAAGATTGAAGCACTTAGGCATAAAAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGTGGACAACTGCCTATATCGTCTGAAGTTTGGGGAGATTTATGGCCTATCGAACGGAGGAGGCAGAGGGAGTTTTTCTGTTTCGGGATGGATATCTTGTTGAAGCTTGATCTAAAGGGAACAAGAAGGTTTTTTGATGCATTTTTCGATCTTGAACCTCGTTATTGGCACGGTTTTTTGTCGTCTCGACTGTTCCTTCCCGAGCTGTTACTCTTTGGACTTTCCTTATTCTCGCACGCATCGAATGCCTCTCGGATTGAAATCATGGCAAAAGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTCGTAAAGGATAGAGACTAA

Coding sequence (CDS)

ATGGCGACGTTGGTAGCCGAAATTGGAGTTGGAGGATTTGGAGACTTGGGGGAGAAAGAGACAACAGAATTAAAGAGGAATCATCTTGGAGAGTACACTAAATCTAAAACTAGAACAGCCACCATTGTCAAACTCTTTTTAAGCAATGGAGACATCAAATTGAGCAAGCGATATTCACTCCTATTATCACCGCCATTAATTGGCAAGTATGGGGCCATGCCCCAAGTGGGGACACGCCCAAATCCCCAATCTTCTCCAATTCCTCTAATTTCCATCTCTTGGAGAAGAGTGGACGGCAGCGTCAGTTCATCAATTGGCCACTGGCCACACGCATTCCACATCTCTCCAATCCACTGGAACCGAATGGAGCTCCTTCCGCCTCCTCAGGGTTTTGGGAGTTTTGTGCTGAAAACCATGGATTCTTTGCTTAAAATCAATACCAAATATGGTTTTATGCAACCATTACATGGGGTTTCTGAAAAGTTGAATGGTTTGAGGAGTACAAAGTTTCATAAGATTCAAAGGAAAAAAGGGGGTTGTGTCAATGTGAGAAGCAGCGCTCTTTTGGAGCTTGTTCCTGAGGCCAAGAAGGAGACTCTTGAGGTTGAGCTTCCCATTTACGATCCGTCGAGAGGCCTCGTCGTCGATCTTGCAGTTGTGGGAGGTGGCCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCAGAGGCAGGGCTTTCAGTTTGTTCAATTGATCCATCTCCCAAGTTGATTTGGCCTAACAATTATGGAGTTTGGGTGGATGAGTTCGAGGCAATGGATTTGCTCGACTGTCTCGACACGACATGGTCCGGTGCTGTCGTGTTCACGAATGAACAATCGACGAAAGATCTTGGTCGGCCTTATGGGAGGGTTAATAGAAAGCAGCTTAAGTCAAAAATGTTGCAAAAGTGCATTGCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTGTTAAAGTTATACATGAGGAGTTTAAATCTTTGTTAATTTGTAATGATGGTGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTCGTTCGATACGATAAGCCTTACAATCCAGGCTACCAAGTAGCATACGGGATTTTAGCCGAGGTCGAGGAACATCCGTTCGATGTTGACAAGATGGTGTTTATGGACTGGAGGGATTCACATTTGGATAACAATATGGTTTTGAAGGAGAGAAATAGCAAAATTCCCACATTTCTTTATGCGATGCCCTTTTCGTCGAATCGAATATTTCTCGAAGAAACTTCTTTGGTAGCTCGACCGGGACTACAGATGAGCGATATCCAGGAAAGAATGGATGCAAGATTGAAGCACTTAGGCATAAAAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGTGGACAACTGCCTATATCGTCTGAAGTTTGGGGAGATTTATGGCCTATCGAACGGAGGAGGCAGAGGGAGTTTTTCTGTTTCGGGATGGATATCTTGTTGAAGCTTGATCTAAAGGGAACAAGAAGGTTTTTTGATGCATTTTTCGATCTTGAACCTCGTTATTGGCACGGTTTTTTGTCGTCTCGACTGTTCCTTCCCGAGCTGTTACTCTTTGGACTTTCCTTATTCTCGCACGCATCGAATGCCTCTCGGATTGAAATCATGGCAAAAGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTCGTAAAGGATAGAGACTAA

Protein sequence

MATLVAEIGVGGFGDLGEKETTELKRNHLGEYTKSKTRTATIVKLFLSNGDIKLSKRYSLLLSPPLIGKYGAMPQVGTRPNPQSSPIPLISISWRRVDGSVSSSIGHWPHAFHISPIHWNRMELLPPPQGFGSFVLKTMDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQRKKGGCVNVRSSALLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPISSEVWGDLWPIERRRQREFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNASRIEIMAKGTPSLVNMIGNLVKDRD
BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=1 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 6.4e-158
Identity = 273/346 (78.90%), Postives = 295/346 (85.26%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQRKK-------GGCVNVRSSALLEL 198
           MD+LLK   K  F+ P+HG S K +   S K HK   +K       G CV  +SSALLEL
Sbjct: 1   MDTLLKTPNKLEFLHPVHGFSVKASSFNSVKPHKFGSRKICENWGKGVCVKAKSSALLEL 60

Query: 199 VPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW 258
           VPE KKE L+ ELP+YDPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSV SIDPSPKLIW
Sbjct: 61  VPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVVSIDPSPKLIW 120

Query: 259 PNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKCI 318
           PNNYGVWVDEFEAMDLLDCLD TWSG VV+ ++ +TKDL RPYGRVNRKQLKSKM+QKCI
Sbjct: 121 PNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCI 180

Query: 319 ANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQVA 378
            NGVKFH AKV+KVIHEE KS+LICNDGVTIQA +VLDATGFSRCLV+YDKPY PGYQVA
Sbjct: 181 LNGVKFHHAKVIKVIHEEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYKPGYQVA 240

Query: 379 YGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETS 438
           YGILAEVEEHPFD  KMV MDWRDSHL NNM LKERN K+PTFLYAMPFSSN+IFLEETS
Sbjct: 241 YGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFLEETS 300

Query: 439 LVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           LVARPGL+M DIQERM ARL HLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 LVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGSLPV 346

BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=1 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 8.7e-155
Identity = 268/346 (77.46%), Postives = 295/346 (85.26%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQRKK-------GGCVNVRSSALLEL 198
           MD+LLK      F+ P HG + K +  RS K H    +K         CV   SSALLEL
Sbjct: 1   MDTLLKTPNNLEFLNPHHGFAVKASTFRSEKHHNFGSRKFCETLGRSVCVKGSSSALLEL 60

Query: 199 VPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIW 258
           VPE KKE L+ ELP+YDPS+G+VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDP+PKLIW
Sbjct: 61  VPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIW 120

Query: 259 PNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKCI 318
           PNNYGVWVDEFEAMDLLDCLD TWSGA V+ ++ + KDL RPYGRVNRKQLKSKM+QKCI
Sbjct: 121 PNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKCI 180

Query: 319 ANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQVA 378
            NGVKFH+AKV+KVIHEE KS+LICNDG+TIQA +VLDATGFSR LV+YDKPYNPGYQVA
Sbjct: 181 MNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVA 240

Query: 379 YGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETS 438
           YGILAEVEEHPFDV+KMVFMDWRDSHL NN  LKERNS+IPTFLYAMPFSSNRIFLEETS
Sbjct: 241 YGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFLEETS 300

Query: 439 LVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           LVARPGL++ DIQERM ARL HLGIKVKSIEEDEHC+IPMGG LP+
Sbjct: 301 LVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPV 346

BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 4.3e-154
Identity = 270/347 (77.81%), Postives = 295/347 (85.01%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQRKK--------GGCVNVRSSALLE 198
           MD+LL+      F   LHG   K++   S K  K   KK          CV   SSALLE
Sbjct: 1   MDTLLRTPNNLEF---LHGFGVKVSAFSSVKSQKFGAKKFCEGLGSRSVCVKASSSALLE 60

Query: 199 LVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI 258
           LVPE KKE L+ ELP+YDPS+G+VVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDP+PKLI
Sbjct: 61  LVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLI 120

Query: 259 WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKC 318
           WPNNYGVWVDEFEAMDLLDCLD TWSGA V+ ++++TKDL RPYGRVNRKQLKSKM+QKC
Sbjct: 121 WPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKC 180

Query: 319 IANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQV 378
           I NGVKFH+AKV+KVIHEE KS+LICNDG+TIQA +VLDATGFSR LV+YDKPYNPGYQV
Sbjct: 181 ILNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQV 240

Query: 379 AYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEET 438
           AYGILAEVEEHPFDV+KMVFMDWRDSHL NN+ LKERNS+IPTFLYAMPFSSNRIFLEET
Sbjct: 241 AYGILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSSNRIFLEET 300

Query: 439 SLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           SLVARPGL M DIQERM ARL HLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 SLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPMGGPLPV 344

BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 4.5e-143
Identity = 256/347 (73.78%), Postives = 282/347 (81.27%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQR--------KKGGCVNVRSSALLE 198
           MD+LLK   K  F  P     E+L    +  +H   R        K    V   S+ALL+
Sbjct: 1   MDTLLKTPNKLDFFIPQFHGFERL--CSNNPYHSRVRLGVKKRAIKIVSSVVSGSAALLD 60

Query: 199 LVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI 258
           LVPE KKE L+ ELP+YD S+  VVDLA+VGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI
Sbjct: 61  LVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI 120

Query: 259 WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKC 318
           WPNNYGVWVDEFEAMDLLDCLDTTWSGAVV+ +E   KDL RPYGRVNRKQLKSKMLQKC
Sbjct: 121 WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKC 180

Query: 319 IANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQV 378
           I NGVKFH++KV  V+HEE  S ++C+DGV IQA++VLDATGFSRCLV+YDKPYNPGYQV
Sbjct: 181 ITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQV 240

Query: 379 AYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEET 438
           AYGI+AEV+ HPFDVDKMVFMDWRD HLD+   LKERNSKIPTFLYAMPFSSNRIFLEET
Sbjct: 241 AYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEET 300

Query: 439 SLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           SLVARPGL+M DIQERM ARLKHLGI VK IEEDE CVIPMGG LP+
Sbjct: 301 SLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPV 345

BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.0e-134
Identity = 235/350 (67.14%), Postives = 280/350 (80.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEK-----LNGLRSTKFHKIQRK------KGGCVNVRSSA 198
           MD+LL+ + +   + PLH ++++         ++  F    RK      + G + V S+ 
Sbjct: 1   MDTLLRTHNRLELLYPLHELAKRHFLSPSPNPQNPNFKFFSRKPYQKKCRNGYIGVSSNQ 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LL+LVPE KKE LE +LP+YDPS+ L +DLAVVGGGP   + +  +   GLSV SIDP+P
Sbjct: 61  LLDLVPEIKKEHLEFDLPLYDPSKALTLDLAVVGGGPLARSCSTSLG-GGLSVVSIDPNP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFE MDLLDCLD TWSGA+V+ +++STK+L RPY RVNRK LKSKM+
Sbjct: 121 KLIWPNNYGVWVDEFEDMDLLDCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMM 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           +KC++NGV+FH+A VVK +HEE KS LIC+DGVTI A +VLDATGFSRCLV+YDKPYNPG
Sbjct: 181 KKCVSNGVRFHQATVVKAMHEEEKSYLICSDGVTIDARVVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDVDKMVFMDWRDSHL+    L ERN+KIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGL+M DIQERM ARL HLGI++KSIEEDE CVIPMGG LP+
Sbjct: 301 EETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPMGGPLPV 349

BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: A2TDC9_CITLA (Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 1.3e-178
Identity = 308/350 (88.00%), Postives = 330/350 (94.29%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF+QPLHGVSEK++G+RSTKF            +++ +KGGC+NVRSS+
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKVSGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSSS 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LEVELP+YDPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPY RVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LKERNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ RLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: A0A0A0L1H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G218350 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.8e-178
Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF+QPLHGVSEKL+G+R TKFH           +++ KKGGCV V+SSA
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LE ELP++DPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LK+RNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ARL HLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: A2TDC8_CITLA (Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 8.7e-178
Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF+QPLHGVSEK++G+RSTKF            +++ +KGGC+NVRSS+
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKVSGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSSS 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LEVELP+YDPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPY RVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSLLICNDGVTIQAAIVLDATG SRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGVSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LKERNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ RLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: E5GC01_CUCME (Lycopene beta cyclase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 8.7e-178
Identity = 305/350 (87.14%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF++PLHGVSEKL+G+R TKFH           +++ +KGGCV VR+SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LE ELP++DPS+GLVVDL VVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LK+RNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ARLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: T1RRM3_CUCME (Lycopene beta cyclase OS=Cucumis melo GN=LBCY PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 2.5e-177
Identity = 303/350 (86.57%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF++PLHGVS+KL+G+R TKFH           +++ +KGGCV VRSSA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSDKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRSSA 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LE ELP++DPS+GLVVDL VVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFD++KMVFMDWRDSHL+NNM+LK+RNSKIPTFLYAMPFS+NRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDINKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSTNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ARLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. TAIR10
Match: AT3G10230.1 (AT3G10230.1 lycopene cyclase)

HSP 1 Score: 509.6 bits (1311), Expect = 2.5e-144
Identity = 256/347 (73.78%), Postives = 282/347 (81.27%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQR--------KKGGCVNVRSSALLE 198
           MD+LLK   K  F  P     E+L    +  +H   R        K    V   S+ALL+
Sbjct: 1   MDTLLKTPNKLDFFIPQFHGFERL--CSNNPYHSRVRLGVKKRAIKIVSSVVSGSAALLD 60

Query: 199 LVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI 258
           LVPE KKE L+ ELP+YD S+  VVDLA+VGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI
Sbjct: 61  LVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI 120

Query: 259 WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKC 318
           WPNNYGVWVDEFEAMDLLDCLDTTWSGAVV+ +E   KDL RPYGRVNRKQLKSKMLQKC
Sbjct: 121 WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKC 180

Query: 319 IANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQV 378
           I NGVKFH++KV  V+HEE  S ++C+DGV IQA++VLDATGFSRCLV+YDKPYNPGYQV
Sbjct: 181 ITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQV 240

Query: 379 AYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEET 438
           AYGI+AEV+ HPFDVDKMVFMDWRD HLD+   LKERNSKIPTFLYAMPFSSNRIFLEET
Sbjct: 241 AYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEET 300

Query: 439 SLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           SLVARPGL+M DIQERM ARLKHLGI VK IEEDE CVIPMGG LP+
Sbjct: 301 SLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPV 345

BLAST of Cp4.1LG19g00300 vs. TAIR10
Match: AT5G57030.1 (AT5G57030.1 Lycopene beta/epsilon cyclase protein)

HSP 1 Score: 176.4 bits (446), Expect = 5.1e-44
Identity = 98/265 (36.98%), Postives = 154/265 (58.11%), Query Frame = 1

Query: 215 VDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTT 274
           +DL V+G GPAGLA+A + ++ GL V  I   P L + NNYGVW DEF  + L  C++  
Sbjct: 109 LDLVVIGCGPAGLALAAESAKLGLKVGLI--GPDLPFTNNYGVWEDEFNDLGLQKCIEHV 168

Query: 275 WSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKCIANGVKFHEAKVVKVIH-EEFKSL 334
           W   +V+ ++     +GR YGRV+R+ L  ++L++C+ +GV +  +KV  +    +   L
Sbjct: 169 WRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRL 228

Query: 335 LICNDGVTIQAAIVLDATG-FSRCLVRYD-KPYNPGYQVAYGILAEVEEHPFDVDKMVFM 394
           + C+D   I   +   A+G  S  L++Y+        Q AYG+  EVE  P+D D+MVFM
Sbjct: 229 VACDDNNVIPCRLATVASGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFM 288

Query: 395 DWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLQMSDIQERMDARL 454
           D+RD     N  ++   ++ PTFLYAMP + +R+F EET L ++  +    ++ ++  RL
Sbjct: 289 DYRDY---TNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRL 348

Query: 455 KHLGIKVKSIEEDEHCVIPMGGQLP 477
             LGI++    E+E   IP+GG LP
Sbjct: 349 DTLGIRILKTYEEEWSYIPVGGSLP 368

BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|124108658|gb|ABM90918.1| (lycopene beta-cyclase [Citrullus lanatus])

HSP 1 Score: 634.4 bits (1635), Expect = 1.9e-178
Identity = 308/350 (88.00%), Postives = 330/350 (94.29%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF+QPLHGVSEK++G+RSTKF            +++ +KGGC+NVRSS+
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKVSGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSSS 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LEVELP+YDPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPY RVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LKERNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ RLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|449466093|ref|XP_004150761.1| (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 2.5e-178
Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF+QPLHGVSEKL+G+R TKFH           +++ KKGGCV V+SSA
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LE ELP++DPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LK+RNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ARL HLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|124108656|gb|ABM90917.1| (lycopene beta-cyclase [Citrullus lanatus])

HSP 1 Score: 631.7 bits (1628), Expect = 1.2e-177
Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF+QPLHGVSEK++G+RSTKF            +++ +KGGC+NVRSS+
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKVSGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSSS 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LEVELP+YDPS+GLVVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPY RVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSLLICNDGVTIQAAIVLDATG SRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGVSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LKERNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ RLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|659115559|ref|XP_008457615.1| (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis melo])

HSP 1 Score: 631.7 bits (1628), Expect = 1.2e-177
Identity = 305/350 (87.14%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF++PLHGVSEKL+G+R TKFH           +++ +KGGCV VR+SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LE ELP++DPS+GLVVDL VVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNM+LK+RNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ARLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|510379617|gb|AGN48016.1| (lycopene beta cyclase [Cucumis melo])

HSP 1 Score: 630.2 bits (1624), Expect = 3.6e-177
Identity = 303/350 (86.57%), Postives = 329/350 (94.00%), Query Frame = 1

Query: 139 MDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFH-----------KIQRKKGGCVNVRSSA 198
           MD+LLKIN KYGF++PLHGVS+KL+G+R TKFH           +++ +KGGCV VRSSA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSDKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRSSA 60

Query: 199 LLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP 258
           LLELVPE KKE LE ELP++DPS+GLVVDL VVGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 259 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKML 318
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 319 QKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPG 378
           QKCI+NGVKFHEAKV+KVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLV+YDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 379 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFL 438
           YQVAYGILAEVEEHPFD++KMVFMDWRDSHL+NNM+LK+RNSKIPTFLYAMPFS+NRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDINKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSTNRIFL 300

Query: 439 EETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPI 478
           EETSLVARPGLQMSDIQERM+ARLKHLGIKVKSIEEDEHCVIPMGG LP+
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPV 350

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LCYB_TOBAC6.4e-15878.90Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=1 SV=1[more]
LCYB_SOLLC8.7e-15577.46Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=1 SV=1[more]
LCYB_CAPAN4.3e-15477.81Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE... [more]
LCYB_ARATH4.5e-14373.78Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1[more]
LCYB_NARPS1.0e-13467.14Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus ... [more]
Match NameE-valueIdentityDescription
A2TDC9_CITLA1.3e-17888.00Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1[more]
A0A0A0L1H5_CUCSA1.8e-17887.71Uncharacterized protein OS=Cucumis sativus GN=Csa_4G218350 PE=4 SV=1[more]
A2TDC8_CITLA8.7e-17887.71Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1[more]
E5GC01_CUCME8.7e-17887.14Lycopene beta cyclase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
T1RRM3_CUCME2.5e-17786.57Lycopene beta cyclase OS=Cucumis melo GN=LBCY PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G10230.12.5e-14473.78 lycopene cyclase[more]
AT5G57030.15.1e-4436.98 Lycopene beta/epsilon cyclase protein[more]
Match NameE-valueIdentityDescription
gi|124108658|gb|ABM90918.1|1.9e-17888.00lycopene beta-cyclase [Citrullus lanatus][more]
gi|449466093|ref|XP_004150761.1|2.5e-17887.71PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus][more]
gi|124108656|gb|ABM90917.1|1.2e-17787.71lycopene beta-cyclase [Citrullus lanatus][more]
gi|659115559|ref|XP_008457615.1|1.2e-17787.14PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis melo][more]
gi|510379617|gb|AGN48016.1|3.6e-17786.57lycopene beta cyclase [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0016117carotenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
IPR010108Lycopene_cyclase_b/e
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016853 isomerase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0016491 oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g00300.1Cp4.1LG19g00300.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010108Lycopene cyclase, beta/epsilonTIGRFAMsTIGR01790TIGR01790coord: 216..477
score: 1.3
IPR023753FAD/NAD(P)-binding domainGENE3DG3DSA:3.50.50.60coord: 215..387
score: 6.6
IPR023753FAD/NAD(P)-binding domainunknownSSF51905FAD/NAD(P)-binding domaincoord: 215..375
score: 2.16E-20coord: 463..545
score: 2.16
NoneNo IPR availablePANTHERPTHR13789MONOOXYGENASEcoord: 189..569
score: 4.1E
NoneNo IPR availablePANTHERPTHR13789:SF249LYCOPENE BETA CYCLASE, CHLOROPLASTICcoord: 189..569
score: 4.1E
NoneNo IPR availablePFAMPF05834Lycopene_cyclcoord: 478..556
score: 2.6E-23coord: 216..476
score: 1.7