Cp4.1LG19g00300 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGTGGGTGGAAATTGGGGACGGCGGTGGTGGAGATGAAGGGATCGCCGGAGAGAAAGAAGCTTGAGCATTTGATGGTGTCTGGTGGAGTGGGTTAAGATCGATTCTTCCCGTGCTTATACAGAAAAAGGTCTGTAAACGAATTGAATTGACCAGTTGGTAGCCGAAATTGGAGTTGGAGGATTTGGAGACTTGGGGGAGAAAGAGACAACAGGTATGTATGCGCTTATGGCAATGCGTCTGTTTTAAATGGATATTCAGACTTAATTATATATTTAAAGCTAAATTAATAAAAATACTTCTATCCCACATCGGAAATTGCCTAATAAGAGTAAGCCTATTTAACTTAGCAGATGAAGGCATCAGGTCACGACCTTACTTGAACAGGATCTGTTCTATAGGTTGTACAACTGTGTCCTTGAGTATTAAGGAGACAAGAACTAAAGTCTGGTGGATGAACCACTGCTGTGCGACTAGAGCGTGACTAACGGCATACGGCCCTTTGGTCCTGCGGCTGTAGATGATCGTTCTTCGGTAGGTTCGCCCTGCCTGGGATGGTCGCACGGCGGTCTGACAGACTCAAAAAAACCTCTTTTTTATTTTTCGTTTTTTTCTTTTTGCTTTTTGAATCTGGAATGTGGGCTGTGATGGAAGAAACCCTTTGTTTTGTGCGTGAAATCGTAGGGATTTGGGTGGTTTGAATGATTAGAAGTATCGGCGTTCTTCTTTCTTGTTCCGTGTTTATTGAGATTTTGGGATGAATTTACGTTTTGAGTTATGGGAATGGTGGAGAATATAATATGTATCCACTCCGCTTGATGCTCCTTACCTGTTTGATGAAATGCCTCACACAAACCTGCTGCACTTCCTTTCTTCATCTTCTTCTTCAGAGTGAAGGTTATCATTAAATTCTCTTCTGTTCAAACATGCCACCACCCTGTTTCAAATGGGTCTCTCTCTGGGTTTGCTAAACAATGGGCATCCAATTTTCATGAGGCAGTTGAGAGCTTTTGCTTTTGCTTTTGCTTTTAAACCCAATGAAGGCTACTTCATGTCATCATCGGCAACACAACTACACTTACATCCTAATAATTTGATCGTTACTTAAATGATGCACACAACTTATAATCGTTCGCATAAAAATGTATATAATCCTTAGTTGTATCACTTTATTGCTTTCTTTTACTACTTTCATGATGTATAGTTTATGTATTGTATTTTCTAAGTGTATGACGGTTCGATAGAATCATGTCTACGCTTGCCTGGTAGACATGGAATGCCATATAATGTACTACTGTGTAAGGGATGCAACCCGTTGTCAACTCCTCCCACTTAGATTTTGTATGACCATTCGGCTGAATCACGTCTAGGCCTACCAGACCTTAATTGACTCAAAATGTACTAAAACGGGGATGCGACTATAGGCTTGAGCATAGGTTGTTCTGTCACCTTAAGCGACACCATTGCATCGTGTGAGAATTAAATGCACCATTAACTAATTAATTATTGTTGTTGTCGACTGTCTTGTCTTGTTTACTTTTCCCGACTTTGTTTTAATGACGTAATCAGAATTAAAGAGGAATCATCTTGGAGAGTACACTAAATCTAAAACTAGAACAGCCACCATTGTCAAACTCTTTTTAAGCAATGGAGACATCAAATTGAGCAAGCGATATTCACTCCTATTATCACCGCCATTAATTGGCAAGTATGGGGCCATGCCCCAAGTGGGGACACGCCCAAATCCCCAATCTTCTCCAATTCCTCTAATTTCCATCTCTTGGAGAAGAGTGGACGGCAGCGTCAGTTCATCAATTGGCCACTGGCCACACGCATTCCACATCTCTCCAATCCACTGGAACCGAATGGAGCTCCTTCCGCCTCCTCAGGTTCGCCTCAAAACACACGCATCTTAATCTTTAACACCGATTTCCATTGAATTTATCCTGTTTCTTGTTCAGTTCTTGAGGGTTTCTTGAAATTTTTGAAAACCCCTTTTCGATTCCTCGTTTTACTGCTTATACTTGCTTGAGATTTCTGGATATTGGGTTTCTGTGGGGATTCCCTGAAAATTCTGCTTGTGGTTGCCCTGTTCAGTGTATTTTGTTTAGGGTTTTGGGAGTTTTGTGCTGAAAACCATGGATTCTTTGCTTAAAATCAATACCAAATATGGTTTTATGCAACCATTACATGGGGTTTCTGAAAAGTTGAATGGTTTGAGGAGTACAAAGTTTCATAAGATTCAAAGGAAAAAAGGGGGTTGTGTCAATGTGAGAAGCAGCGCTCTTTTGGAGCTTGTTCCTGAGGCCAAGAAGGAGACTCTTGAGGTTGAGCTTCCCATTTACGATCCGTCGAGAGGCCTCGTCGTCGATCTTGCAGTTGTGGGAGGTGGCCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCAGAGGCAGGGCTTTCAGTTTGTTCAATTGATCCATCTCCCAAGTTGATTTGGCCTAACAATTATGGAGTTTGGGTGGATGAGTTCGAGGCAATGGATTTGCTCGACTGTCTCGACACGACATGGTCCGGTGCTGTCGTGTTCACGAATGAACAATCGACGAAAGATCTTGGTCGGCCTTATGGGAGGGTTAATAGAAAGCAGCTTAAGTCAAAAATGTTGCAAAAGTGCATTGCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTGTTAAAGTTATACATGAGGAGTTTAAATCTTTGTTAATTTGTAATGATGGTGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTCGTTCGATACGATAAGCCTTACAATCCAGGCTACCAAGTAGCATACGGGATTTTAGCCGAGGTCGAGGAACATCCGTTCGATGTTGACAAGATGGTGTTTATGGACTGGAGGGATTCACATTTGGATAACAATATGGTTTTGAAGGAGAGAAATAGCAAAATTCCCACATTTCTTTATGCGATGCCCTTTTCGTCGAATCGAATATTTCTCGAAGAAACTTCTTTGGTAGCTCGACCGGGACTACAGATGAGCGATATCCAGGAAAGAATGGATGCAAGATTGAAGCACTTAGGCATAAAAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGTGGACAACTGCCTGTTCTTCCTCAAAGAGTCGTTGGAATCGGAGGAACGGCGGGGATGGTGCACCCTTCGACGGGATATATTGATATGAACCAAGAGACTCAATCATACAATATACTTCAATGAAGATGTGAAGAAAAGGTTGTCAAAATTATCAAAGGATGTTTCAACTCATGCTACATTGAAGAAGAATGAAGTTTGATTGTTGTAAATTTTGGGTGGGTTACAATTTAGAGTAATTTAGATTTATTGTATTTTTAGGTTACATTTACATAATGGCTCATTATGGCCATTAAGTATAAATGTTACACCTCTTGGAATGCCTTTAGTAGTTTCATTTTGAGGCTATATAAAGCCATGTATGTTGTATTTGTAAGGTAGACTTGGAAAATATAGAAAGAAGCATTTGTGCTTTTCTTTAGCCAATGGCTAAGTTTCTTTGCAATTCTATGTAGTTTAGATTGCATGTAGAATCATTCAAGCTCGACATGATCAATCTTGCTTGTGGAGTGATTCGAATCTCAAACAAGTGTTTGAGATATTTGATCAACAAGAATCATTGAAGCTAGACATGATCGATTTTGCTTCTGGAGTGATTCGAATCTCAAACAAAGTGTTCTTGGCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTACTCCCCTTGTAGTGATTCCTTATCTTATCATATATGGTAGCAAGAACTCTAGCAGCAGCACCTATTGTTGCCAGTGCAATAGTTCGGTGTCTTGGTTCGGATGGACGTTTCAGGGGAGACGAGATATCGTCTGAAGTTTGGGGAGATTTATGGCCTATCGAACGGAGGAGGCAGAGGGAGTTTTTCTGTTTCGGGATGGATATCTTGTTGAAGCTTGATCTAAAGGGAACAAGAAGGTTTTTTGATGCATTTTTCGATCTTGAACCTCGTTATTGGCACGGTTTTTTGTCGTCTCGACTGTTCCTTCCCGAGCTGTTACTCTTTGGACTTTCCTTATTCTCGCACGCATCGAATGCCTCTCGGATTGAAATCATGGCAAAAGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTCGTAAAGGATAGAGACTAA ATGGCGACGTTGGTAGCCGAAATTGGAGTTGGAGGATTTGGAGACTTGGGGGAGAAAGAGACAACAGAATTAAAGAGGAATCATCTTGGAGAGTACACTAAATCTAAAACTAGAACAGCCACCATTGTCAAACTCTTTTTAAGCAATGGAGACATCAAATTGAGCAAGCGATATTCACTCCTATTATCACCGCCATTAATTGGCAAGTATGGGGCCATGCCCCAAGTGGGGACACGCCCAAATCCCCAATCTTCTCCAATTCCTCTAATTTCCATCTCTTGGAGAAGAGTGGACGGCAGCGTCAGTTCATCAATTGGCCACTGGCCACACGCATTCCACATCTCTCCAATCCACTGGAACCGAATGGAGCTCCTTCCGCCTCCTCAGGGTTTTGGGAGTTTTGTGCTGAAAACCATGGATTCTTTGCTTAAAATCAATACCAAATATGGTTTTATGCAACCATTACATGGGGTTTCTGAAAAGTTGAATGGTTTGAGGAGTACAAAGTTTCATAAGATTCAAAGGAAAAAAGGGGGTTGTGTCAATGTGAGAAGCAGCGCTCTTTTGGAGCTTGTTCCTGAGGCCAAGAAGGAGACTCTTGAGGTTGAGCTTCCCATTTACGATCCGTCGAGAGGCCTCGTCGTCGATCTTGCAGTTGTGGGAGGTGGCCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCAGAGGCAGGGCTTTCAGTTTGTTCAATTGATCCATCTCCCAAGTTGATTTGGCCTAACAATTATGGAGTTTGGGTGGATGAGTTCGAGGCAATGGATTTGCTCGACTGTCTCGACACGACATGGTCCGGTGCTGTCGTGTTCACGAATGAACAATCGACGAAAGATCTTGGTCGGCCTTATGGGAGGGTTAATAGAAAGCAGCTTAAGTCAAAAATGTTGCAAAAGTGCATTGCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTGTTAAAGTTATACATGAGGAGTTTAAATCTTTGTTAATTTGTAATGATGGTGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTCGTTCGATACGATAAGCCTTACAATCCAGGCTACCAAGTAGCATACGGGATTTTAGCCGAGGTCGAGGAACATCCGTTCGATGTTGACAAGATGGTGTTTATGGACTGGAGGGATTCACATTTGGATAACAATATGGTTTTGAAGGAGAGAAATAGCAAAATTCCCACATTTCTTTATGCGATGCCCTTTTCGTCGAATCGAATATTTCTCGAAGAAACTTCTTTGGTAGCTCGACCGGGACTACAGATGAGCGATATCCAGGAAAGAATGGATGCAAGATTGAAGCACTTAGGCATAAAAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGTGGACAACTGCCTATATCGTCTGAAGTTTGGGGAGATTTATGGCCTATCGAACGGAGGAGGCAGAGGGAGTTTTTCTGTTTCGGGATGGATATCTTGTTGAAGCTTGATCTAAAGGGAACAAGAAGGTTTTTTGATGCATTTTTCGATCTTGAACCTCGTTATTGGCACGGTTTTTTGTCGTCTCGACTGTTCCTTCCCGAGCTGTTACTCTTTGGACTTTCCTTATTCTCGCACGCATCGAATGCCTCTCGGATTGAAATCATGGCAAAAGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTCGTAAAGGATAGAGACTAA ATGGCGACGTTGGTAGCCGAAATTGGAGTTGGAGGATTTGGAGACTTGGGGGAGAAAGAGACAACAGAATTAAAGAGGAATCATCTTGGAGAGTACACTAAATCTAAAACTAGAACAGCCACCATTGTCAAACTCTTTTTAAGCAATGGAGACATCAAATTGAGCAAGCGATATTCACTCCTATTATCACCGCCATTAATTGGCAAGTATGGGGCCATGCCCCAAGTGGGGACACGCCCAAATCCCCAATCTTCTCCAATTCCTCTAATTTCCATCTCTTGGAGAAGAGTGGACGGCAGCGTCAGTTCATCAATTGGCCACTGGCCACACGCATTCCACATCTCTCCAATCCACTGGAACCGAATGGAGCTCCTTCCGCCTCCTCAGGGTTTTGGGAGTTTTGTGCTGAAAACCATGGATTCTTTGCTTAAAATCAATACCAAATATGGTTTTATGCAACCATTACATGGGGTTTCTGAAAAGTTGAATGGTTTGAGGAGTACAAAGTTTCATAAGATTCAAAGGAAAAAAGGGGGTTGTGTCAATGTGAGAAGCAGCGCTCTTTTGGAGCTTGTTCCTGAGGCCAAGAAGGAGACTCTTGAGGTTGAGCTTCCCATTTACGATCCGTCGAGAGGCCTCGTCGTCGATCTTGCAGTTGTGGGAGGTGGCCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCAGAGGCAGGGCTTTCAGTTTGTTCAATTGATCCATCTCCCAAGTTGATTTGGCCTAACAATTATGGAGTTTGGGTGGATGAGTTCGAGGCAATGGATTTGCTCGACTGTCTCGACACGACATGGTCCGGTGCTGTCGTGTTCACGAATGAACAATCGACGAAAGATCTTGGTCGGCCTTATGGGAGGGTTAATAGAAAGCAGCTTAAGTCAAAAATGTTGCAAAAGTGCATTGCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTGTTAAAGTTATACATGAGGAGTTTAAATCTTTGTTAATTTGTAATGATGGTGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTCGTTCGATACGATAAGCCTTACAATCCAGGCTACCAAGTAGCATACGGGATTTTAGCCGAGGTCGAGGAACATCCGTTCGATGTTGACAAGATGGTGTTTATGGACTGGAGGGATTCACATTTGGATAACAATATGGTTTTGAAGGAGAGAAATAGCAAAATTCCCACATTTCTTTATGCGATGCCCTTTTCGTCGAATCGAATATTTCTCGAAGAAACTTCTTTGGTAGCTCGACCGGGACTACAGATGAGCGATATCCAGGAAAGAATGGATGCAAGATTGAAGCACTTAGGCATAAAAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCAATGGGTGGACAACTGCCTATATCGTCTGAAGTTTGGGGAGATTTATGGCCTATCGAACGGAGGAGGCAGAGGGAGTTTTTCTGTTTCGGGATGGATATCTTGTTGAAGCTTGATCTAAAGGGAACAAGAAGGTTTTTTGATGCATTTTTCGATCTTGAACCTCGTTATTGGCACGGTTTTTTGTCGTCTCGACTGTTCCTTCCCGAGCTGTTACTCTTTGGACTTTCCTTATTCTCGCACGCATCGAATGCCTCTCGGATTGAAATCATGGCAAAAGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTCGTAAAGGATAGAGACTAA MATLVAEIGVGGFGDLGEKETTELKRNHLGEYTKSKTRTATIVKLFLSNGDIKLSKRYSLLLSPPLIGKYGAMPQVGTRPNPQSSPIPLISISWRRVDGSVSSSIGHWPHAFHISPIHWNRMELLPPPQGFGSFVLKTMDSLLKINTKYGFMQPLHGVSEKLNGLRSTKFHKIQRKKGGCVNVRSSALLELVPEAKKETLEVELPIYDPSRGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLGRPYGRVNRKQLKSKMLQKCIANGVKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDKPYNPGYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPISSEVWGDLWPIERRRQREFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNASRIEIMAKGTPSLVNMIGNLVKDRD
BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=1 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 6.4e-158 Identity = 273/346 (78.90%), Postives = 295/346 (85.26%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=1 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 8.7e-155 Identity = 268/346 (77.46%), Postives = 295/346 (85.26%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 4.3e-154 Identity = 270/347 (77.81%), Postives = 295/347 (85.01%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 4.5e-143 Identity = 256/347 (73.78%), Postives = 282/347 (81.27%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.0e-134 Identity = 235/350 (67.14%), Postives = 280/350 (80.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: A2TDC9_CITLA (Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 1.3e-178 Identity = 308/350 (88.00%), Postives = 330/350 (94.29%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: A0A0A0L1H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G218350 PE=4 SV=1) HSP 1 Score: 634.0 bits (1634), Expect = 1.8e-178 Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: A2TDC8_CITLA (Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1) HSP 1 Score: 631.7 bits (1628), Expect = 8.7e-178 Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: E5GC01_CUCME (Lycopene beta cyclase OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 631.7 bits (1628), Expect = 8.7e-178 Identity = 305/350 (87.14%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TrEMBL
Match: T1RRM3_CUCME (Lycopene beta cyclase OS=Cucumis melo GN=LBCY PE=4 SV=1) HSP 1 Score: 630.2 bits (1624), Expect = 2.5e-177 Identity = 303/350 (86.57%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TAIR10
Match: AT3G10230.1 (AT3G10230.1 lycopene cyclase) HSP 1 Score: 509.6 bits (1311), Expect = 2.5e-144 Identity = 256/347 (73.78%), Postives = 282/347 (81.27%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. TAIR10
Match: AT5G57030.1 (AT5G57030.1 Lycopene beta/epsilon cyclase protein) HSP 1 Score: 176.4 bits (446), Expect = 5.1e-44 Identity = 98/265 (36.98%), Postives = 154/265 (58.11%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|124108658|gb|ABM90918.1| (lycopene beta-cyclase [Citrullus lanatus]) HSP 1 Score: 634.4 bits (1635), Expect = 1.9e-178 Identity = 308/350 (88.00%), Postives = 330/350 (94.29%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|449466093|ref|XP_004150761.1| (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus]) HSP 1 Score: 634.0 bits (1634), Expect = 2.5e-178 Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|124108656|gb|ABM90917.1| (lycopene beta-cyclase [Citrullus lanatus]) HSP 1 Score: 631.7 bits (1628), Expect = 1.2e-177 Identity = 307/350 (87.71%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|659115559|ref|XP_008457615.1| (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis melo]) HSP 1 Score: 631.7 bits (1628), Expect = 1.2e-177 Identity = 305/350 (87.14%), Postives = 329/350 (94.00%), Query Frame = 1
BLAST of Cp4.1LG19g00300 vs. NCBI nr
Match: gi|510379617|gb|AGN48016.1| (lycopene beta cyclase [Cucumis melo]) HSP 1 Score: 630.2 bits (1624), Expect = 3.6e-177 Identity = 303/350 (86.57%), Postives = 329/350 (94.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|