CmoCh03G001820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G001820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Lycopene beta cyclase
Location	Cmo_Chr03 : 2840904 .. 2842397 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTTTGCTTAAAATCAATAACAAATATGGTTTTCTGCAACAATCTCATGGGGTTTCGGAGAAATTGAGGAGTGGTGTTAGGAGTACGAAGATTCAGAGTCGGGAGTTAGGATTTGGCCATAGGAAGGGTCGTGTGAAATGGAGGAATAGTGCTCTTTTGGAGCTTGTTCCTGAAACCAAGAAGGAGAATCTTGAGTTTGAACTTCCCATGTATGATCCTTCAAAGGGCCTTGTCGTGGATCTTGCTGTCGTGGGAGGTGGCCCAGCAGGGCTTGCTGTTGCACAGCAGGTTTCCGAGGCAGGGCTTTCAGTTTGTGCAATTGATCCATCTCCCAAGTTGATTTGGCCAAACAATTATGGGGTTTGGGTGGATGAATTCGAGGCGATGGATTTGCTCGATTGCCTCGACACGACGTGGTCCGGTGCTGTTGTGTTCACGAATGAACAATCGACAAAAGATCTTGCTCGCCCTTATGGGAGGGTTAATCGAAAACAGCTGAAGTCGAAAATGTTGCAGAAATGTATTTCTAATGGTGTTAAGTTTCATGAAGCTAAGGTTATTAAAGTTATACATGAGGAATTCAAATCCTTGTTGATTTGCAATGATGGTGTTACCATTCAAGCTGCTGTTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTTGTTCAGTATAATAAGCCTTATAATCCGGGCTACCAAGTAGCTTATGGAATTTTAGCTGAGGTTGAGGAACATCCGTTCGACGTCGACAAGATGGTGTTTATGGATTGGAGGGATTCGCATCTGGATAACAACATGATTTTAAAGGAGAGAAATAGCAAAATTCCTACATTTCTCTATGCGATGCCCTTTTCATCGAATCGGATATTTCTGGAAGAAACTTCTTTGGTAGCTCGACCGGGATTACAAATGAGCGATATCCAGGAAAGAATGGAGTTGAGATTGAAGCACTTGGGAATAAAAGTGAAGAGCATTGAAGAGGATGAGCATTGTGTCATTCCAATGGGTGGTCCGCTGCCCGTTCTACCTCAAAGAGTTGTCGGAATTGGTGGAACGGCAGGGATGGTGCACCCTTCAACGGGATATATGGTAGCTAGAACTCTTGCAGCAGCACCTATTGTTGCTAGTGCAATCGTTCGGCTCCTCGGTTCGGATGGACGTTTCAAGGGAGATGAGATATCCTCTGAAGTTTGGAAAGATCTATGGCCCATCGAACGGAGGAGGCAGAGGGAATTTTTCTGTTTTGGGATGGATATTTTATTGAAGCTTGATCTAAAAGGTACAAGAAGGTTTTTTGATGCGTTTTTTGATCTCGAACCTCGCTACTGGCATGGATTCTTGTCATCACGACTGTTCCTTCCCGAGCTTATACTCTTTGGGCTTTCGTTATTCTCTAACGCATCTAATGCCTCTAGGCTTGAAATCATGGCAAAGGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTGGTAAAGGATAGAGAGTAA

mRNA sequence

ATGGATACTTTGCTTAAAATCAATAACAAATATGGTTTTCTGCAACAATCTCATGGGGTTTCGGAGAAATTGAGGAGTGGTGTTAGGAGTACGAAGATTCAGAGTCGGGAGTTAGGATTTGGCCATAGGAAGGGTCGTGTGAAATGGAGGAATAGTGCTCTTTTGGAGCTTGTTCCTGAAACCAAGAAGGAGAATCTTGAGTTTGAACTTCCCATGTATGATCCTTCAAAGGGCCTTGTCGTGGATCTTGCTGTCGTGGGAGGTGGCCCAGCAGGGCTTGCTGTTGCACAGCAGGTTTCCGAGGCAGGGCTTTCAGTTTGTGCAATTGATCCATCTCCCAAGTTGATTTGGCCAAACAATTATGGGGTTTGGGTGGATGAATTCGAGGCGATGGATTTGCTCGATTGCCTCGACACGACGTGGTCCGGTGCTGTTGTGTTCACGAATGAACAATCGACAAAAGATCTTGCTCGCCCTTATGGGAGGGTTAATCGAAAACAGCTGAAGTCGAAAATGTTGCAGAAATGTATTTCTAATGGTGTTAAGTTTCATGAAGCTAAGGTTATTAAAGTTATACATGAGGAATTCAAATCCTTGTTGATTTGCAATGATGGTGTTACCATTCAAGCTGCTGTTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTTGTTCAGTATAATAAGCCTTATAATCCGGGCTACCAAGTAGCTTATGGAATTTTAGCTGAGGTTGAGGAACATCCGTTCGACGTCGACAAGATGGTGTTTATGGATTGGAGGGATTCGCATCTGGATAACAACATGATTTTAAAGGAGAGAAATAGCAAAATTCCTACATTTCTCTATGCGATGCCCTTTTCATCGAATCGGATATTTCTGGAAGAAACTTCTTTGGTAGCTCGACCGGGATTACAAATGAGCGATATCCAGGAAAGAATGGAGTTGAGATTGAAGCACTTGGGAATAAAAGTGAAGAGCATTGAAGAGGATGAGCATTGTGTCATTCCAATGGGTGGTCCGCTGCCCGTTCTACCTCAAAGAGTTGTCGGAATTGGTGGAACGGCAGGGATGGTGCACCCTTCAACGGGATATATGGTAGCTAGAACTCTTGCAGCAGCACCTATTGTTGCTAGTGCAATCGTTCGGCTCCTCGGTTCGGATGGACGTTTCAAGGGAGATGAGATATCCTCTGAAGTTTGGAAAGATCTATGGCCCATCGAACGGAGGAGGCAGAGGGAATTTTTCTGTTTTGGGATGGATATTTTATTGAAGCTTGATCTAAAAGGTACAAGAAGGTTTTTTGATGCGTTTTTTGATCTCGAACCTCGCTACTGGCATGGATTCTTGTCATCACGACTGTTCCTTCCCGAGCTTATACTCTTTGGGCTTTCGTTATTCTCTAACGCATCTAATGCCTCTAGGCTTGAAATCATGGCAAAGGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTGGTAAAGGATAGAGAGTAA

Coding sequence (CDS)

ATGGATACTTTGCTTAAAATCAATAACAAATATGGTTTTCTGCAACAATCTCATGGGGTTTCGGAGAAATTGAGGAGTGGTGTTAGGAGTACGAAGATTCAGAGTCGGGAGTTAGGATTTGGCCATAGGAAGGGTCGTGTGAAATGGAGGAATAGTGCTCTTTTGGAGCTTGTTCCTGAAACCAAGAAGGAGAATCTTGAGTTTGAACTTCCCATGTATGATCCTTCAAAGGGCCTTGTCGTGGATCTTGCTGTCGTGGGAGGTGGCCCAGCAGGGCTTGCTGTTGCACAGCAGGTTTCCGAGGCAGGGCTTTCAGTTTGTGCAATTGATCCATCTCCCAAGTTGATTTGGCCAAACAATTATGGGGTTTGGGTGGATGAATTCGAGGCGATGGATTTGCTCGATTGCCTCGACACGACGTGGTCCGGTGCTGTTGTGTTCACGAATGAACAATCGACAAAAGATCTTGCTCGCCCTTATGGGAGGGTTAATCGAAAACAGCTGAAGTCGAAAATGTTGCAGAAATGTATTTCTAATGGTGTTAAGTTTCATGAAGCTAAGGTTATTAAAGTTATACATGAGGAATTCAAATCCTTGTTGATTTGCAATGATGGTGTTACCATTCAAGCTGCTGTTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTTGTTCAGTATAATAAGCCTTATAATCCGGGCTACCAAGTAGCTTATGGAATTTTAGCTGAGGTTGAGGAACATCCGTTCGACGTCGACAAGATGGTGTTTATGGATTGGAGGGATTCGCATCTGGATAACAACATGATTTTAAAGGAGAGAAATAGCAAAATTCCTACATTTCTCTATGCGATGCCCTTTTCATCGAATCGGATATTTCTGGAAGAAACTTCTTTGGTAGCTCGACCGGGATTACAAATGAGCGATATCCAGGAAAGAATGGAGTTGAGATTGAAGCACTTGGGAATAAAAGTGAAGAGCATTGAAGAGGATGAGCATTGTGTCATTCCAATGGGTGGTCCGCTGCCCGTTCTACCTCAAAGAGTTGTCGGAATTGGTGGAACGGCAGGGATGGTGCACCCTTCAACGGGATATATGGTAGCTAGAACTCTTGCAGCAGCACCTATTGTTGCTAGTGCAATCGTTCGGCTCCTCGGTTCGGATGGACGTTTCAAGGGAGATGAGATATCCTCTGAAGTTTGGAAAGATCTATGGCCCATCGAACGGAGGAGGCAGAGGGAATTTTTCTGTTTTGGGATGGATATTTTATTGAAGCTTGATCTAAAAGGTACAAGAAGGTTTTTTGATGCGTTTTTTGATCTCGAACCTCGCTACTGGCATGGATTCTTGTCATCACGACTGTTCCTTCCCGAGCTTATACTCTTTGGGCTTTCGTTATTCTCTAACGCATCTAATGCCTCTAGGCTTGAAATCATGGCAAAGGGAACTCCGTCTTTGGTAAACATGATCGGAAATCTGGTAAAGGATAGAGAGTAA

Homology

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BLAST of CmoCh03G001820 vs. Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 3.6e-234
Identity = 406/499 (81.36%), Postives = 442/499 (88.58%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSREL--GFGHRKGRVKWRNSALLELV 60
           MDTLL+  N   FL    GV     S V+S K  +++   G G R   VK  +SALLELV
Sbjct: 1   MDTLLRTPNNLEFLH-GFGVKVSAFSSVKSQKFGAKKFCEGLGSRSVCVKASSSALLELV 60

Query: 61  PETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWP 120
           PETKKENL+FELPMYDPSKG+VVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDP+PKLIWP
Sbjct: 61  PETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIWP 120

Query: 121 NNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCIS 180
           NNYGVWVDEFEAMDLLDCLD TWSGA V+ ++++TKDL RPYGRVNRKQLKSKM+QKCI 
Sbjct: 121 NNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKCIL 180

Query: 181 NGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNPGYQVAY 240
           NGVKFH+AKVIKVIHEE KS+LICNDG+TIQA VVLDATGFSR LVQY+KPYNPGYQVAY
Sbjct: 181 NGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVAY 240

Query: 241 GILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFLEETSL 300
           GILAEVEEHPFDV+KMVFMDWRDSHL NN+ LKERNS+IPTFLYAMPFSSNRIFLEETSL
Sbjct: 241 GILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSSNRIFLEETSL 300

Query: 301 VARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMV 360
           VARPGL M DIQERM  RL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMV
Sbjct: 301 VARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMV 360

Query: 361 HPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQREFFCFG 420
           HPSTGYMVARTLAAAP+VA+AI++ L S+    GDE+S+ VWKDLWPIERRRQREFFCFG
Sbjct: 361 HPSTGYMVARTLAAAPVVANAIIQYLSSERSHSGDELSAAVWKDLWPIERRRQREFFCFG 420

Query: 421 MDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNASRLEIM 480
           MDILLKLDL  TRRFFDAFFDLEPRYWHGFLSSRLFLPELI+FGLSLFS+ASN SRLEIM
Sbjct: 421 MDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTSRLEIM 480

Query: 481 AKGTPSLVNMIGNLVKDRE 498
            KGT  LV+MI NL++D+E
Sbjct: 481 TKGTLPLVHMINNLLQDKE 498

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BLAST of CmoCh03G001820 vs. Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=1 SV=1)

HSP 1 Score: 808.5 bits (2087), Expect = 4.0e-233
Identity = 406/505 (80.40%), Postives = 440/505 (87.13%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRK-----GR---VKWRNS 60
           MDTLLK  N   FL   HG + K      ST    +   FG RK     GR   VK  +S
Sbjct: 1   MDTLLKTPNNLEFLNPHHGFAVKA-----STFRSEKHHNFGSRKFCETLGRSVCVKGSSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALLELVPETKKENL+FELPMYDPSKG+VVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDP+
Sbjct: 61  ALLELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPN 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLD TWSGA V+ ++ + KDL RPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           +QKCI NGVKFH+AKVIKVIHEE KS+LICNDG+TIQA VVLDATGFSR LVQY+KPYNP
Sbjct: 181 MQKCIMNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL NN  LKERNS+IPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGL++ DIQERM  RL HLGIKVKSIEEDEHC+IPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAP+VA+AI++ LGS+    G+E+S+ VWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPVVANAIIQYLGSERSHSGNELSTAVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDL  TRRFFDAFFDLEPRYWHGFLSSRLFLPELI+FGLSLFS+ASN 
Sbjct: 421 EFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNT 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SR EIM KGT  LVNMI NL++D+E
Sbjct: 481 SRFEIMTKGTVPLVNMINNLLQDKE 500

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BLAST of CmoCh03G001820 vs. Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=1 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 2.2e-231
Identity = 404/500 (80.80%), Postives = 434/500 (86.80%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRS--GVRSTKIQSRELGFGHRKGR-VKWRNSALLEL 60
           MDTLLK  NK  FL   HG S K  S   V+  K  SR++     KG  VK ++SALLEL
Sbjct: 1   MDTLLKTPNKLEFLHPVHGFSVKASSFNSVKPHKFGSRKICENWGKGVCVKAKSSALLEL 60

Query: 61  VPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIW 120
           VPETKKENL+FELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSV +IDPSPKLIW
Sbjct: 61  VPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVVSIDPSPKLIW 120

Query: 121 PNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCI 180
           PNNYGVWVDEFEAMDLLDCLD TWSG VV+ ++ +TKDL RPYGRVNRKQLKSKM+QKCI
Sbjct: 121 PNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCI 180

Query: 181 SNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNPGYQVA 240
            NGVKFH AKVIKVIHEE KS+LICNDGVTIQA VVLDATGFSRCLVQY+KPY PGYQVA
Sbjct: 181 LNGVKFHHAKVIKVIHEEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYKPGYQVA 240

Query: 241 YGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFLEETS 300
           YGILAEVEEHPFD  KMV MDWRDSHL NNM LKERN K+PTFLYAMPFSSN+IFLEETS
Sbjct: 241 YGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFLEETS 300

Query: 301 LVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGM 360
           LVARPGL+M DIQERM  RL HLGIKVKSIEEDEHCVIPMGG LPV+PQRVVG GGTAG+
Sbjct: 301 LVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGSLPVIPQRVVGTGGTAGL 360

Query: 361 VHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQREFFCF 420
           VHPSTGYMVARTLAAAP+VA+AI+  LGS+    G+E+S+ VWKDLWPIERRRQREFFCF
Sbjct: 361 VHPSTGYMVARTLAAAPVVANAIIHYLGSEKDLLGNELSAAVWKDLWPIERRRQREFFCF 420

Query: 421 GMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNASRLEI 480
           GMDILLKLDL  TRRFFDAFFDLEPRYWHGFLSSRL+LPELI FGLSLFS ASN SR+EI
Sbjct: 421 GMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLYLPELIFFGLSLFSRASNTSRIEI 480

Query: 481 MAKGTPSLVNMIGNLVKDRE 498
           M KGT  LVNMI NL++D E
Sbjct: 481 MTKGTLPLVNMINNLLQDTE 500

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BLAST of CmoCh03G001820 vs. Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 1.4e-222
Identity = 389/506 (76.88%), Postives = 431/506 (85.18%), Query Frame = 1


Query: 1   MDTLLKINNKYGF-LQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWRNS------A 60
           MDTLLK  NK  F + Q HG      +    ++++      G +K  +K  +S      A
Sbjct: 1   MDTLLKTPNKLDFFIPQFHGFERLCSNNPYHSRVR-----LGVKKRAIKIVSSVVSGSAA 60

Query: 61  LLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LL+LVPETKKENL+FELP+YD SK  VVDLA+VGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVV+ +E   KDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNPG 240
           QKCI+NGVKFH++KV  V+HEE  S ++C+DGV IQA+VVLDATGFSRCLVQY+KPYNPG
Sbjct: 181 QKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGI+AEV+ HPFDVDKMVFMDWRD HLD+   LKERNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGL+M DIQERM  RLKHLGI VK IEEDE CVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRLLG--SDGRFKGDEISSEVWKDLWPIERRRQ 420
           TAGMVHPSTGYMVARTLAAAPIVA+AIVR LG  S    +GD++S+EVW+DLWPIERRRQ
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQ 420

Query: 421 REFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASN 480
           REFFCFGMDILLKLDL  TRRFFDAFFDL+P YWHGFLSSRLFLPEL++FGLSLFS+ASN
Sbjct: 421 REFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASN 480

Query: 481 ASRLEIMAKGTPSLVNMIGNLVKDRE 498
            SRLEIM KGT  L  MI NLV+DR+
Sbjct: 481 TSRLEIMTKGTVPLAKMINNLVQDRD 501

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BLAST of CmoCh03G001820 vs. Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 1.9e-211
Identity = 366/505 (72.48%), Postives = 423/505 (83.76%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRK--------GRVKWRNS 60
           MDTLL+ +N+   L   H ++++      S   Q+    F  RK        G +   ++
Sbjct: 1   MDTLLRTHNRLELLYPLHELAKRHFLSP-SPNPQNPNFKFFSRKPYQKKCRNGYIGVSSN 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
            LL+LVPE KKE+LEF+LP+YDPSK L +DLAVVGGGP   + +  +   GLSV +IDP+
Sbjct: 61  QLLDLVPEIKKEHLEFDLPLYDPSKALTLDLAVVGGGPLARSCSTSLG-GGLSVVSIDPN 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFE MDLLDCLD TWSGA+V+ +++STK+L+RPY RVNRK LKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEDMDLLDCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           ++KC+SNGV+FH+A V+K +HEE KS LIC+DGVTI A VVLDATGFSRCLVQY+KPYNP
Sbjct: 181 MKKCVSNGVRFHQATVVKAMHEEEKSYLICSDGVTIDARVVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHL+    L ERN+KIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGL+M DIQERM  RL HLGI++KSIEEDE CVIPMGGPLPV+PQRVVGIG
Sbjct: 301 LEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPMGGPLPVIPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVA++IV+ L SD    G+++S++VWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVANSIVQYLVSDSGLSGNDLSADVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDL+GTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+ FGLSLFS+ASN 
Sbjct: 421 EFFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELVPFGLSLFSHASNT 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
            +LEIMAKGT  LVNMI NLV+DR+
Sbjct: 481 CKLEIMAKGTLPLVNMINNLVQDRD 503

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BLAST of CmoCh03G001820 vs. TrEMBL
Match: G3LUM6_CUCMO (Lycopene beta cyclase OS=Cucurbita moschata GN=LCYB PE=2 SV=1)

HSP 1 Score: 961.1 bits (2483), Expect = 5.4e-277
Identity = 472/497 (94.97%), Postives = 486/497 (97.79%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWRNSALLELVPE 60
           MDTLLKINNKYGFLQQSHGVSEKLR GVRSTKIQSRE GFGHRKGRVKWRNSALLELVPE
Sbjct: 1   MDTLLKINNKYGFLQQSHGVSEKLRGGVRSTKIQSREFGFGHRKGRVKWRNSALLELVPE 60

Query: 61  TKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNN 120
           TKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNN
Sbjct: 61  TKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNN 120

Query: 121 YGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCISNG 180
           YGVWVD+FEAMDLLDCLDTTWSGAVVFTN QSTKDL RPYGRVNRKQLKSK LQKCI+NG
Sbjct: 121 YGVWVDKFEAMDLLDCLDTTWSGAVVFTNGQSTKDLGRPYGRVNRKQLKSKFLQKCIANG 180

Query: 181 VKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNPGYQVAYGI 240
           VKFHEAKV+KVIHEEFKSLLICNDGVTIQAA+VLDATGFSRCLV+Y++PYNPGYQVAYGI
Sbjct: 181 VKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDEPYNPGYQVAYGI 240

Query: 241 LAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFLEETSLVA 300
           LAEVEEHPFDVDKMVFMDWRDSHLDNNM+LKERNSKIPTFLYAMPFSSNRIFLEETSLVA
Sbjct: 241 LAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETSLVA 300

Query: 301 RPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHP 360
           RPGLQMSDIQERM+ RLKHLGIKVKSIEEDEHCVIPMGG LPVLPQRVVGIGGTAGMVHP
Sbjct: 301 RPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPVLPQRVVGIGGTAGMVHP 360

Query: 361 STGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQREFFCFGMD 420
           STGYMVARTLAAAPIVA AIVR LGSDGRF+GDEISSEVW+DLWPIERRRQREFFCFGMD
Sbjct: 361 STGYMVARTLAAAPIVAGAIVRCLGSDGRFRGDEISSEVWRDLWPIERRRQREFFCFGMD 420

Query: 421 ILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNASRLEIMAK 480
           ILLKLDLKGTRR FDAFFDLEP YWHGFLSSRLFLPELILFGLSLFS+ASNASR+EIMAK
Sbjct: 421 ILLKLDLKGTRRLFDAFFDLEPHYWHGFLSSRLFLPELILFGLSLFSHASNASRVEIMAK 480

Query: 481 GTPSLVNMIGNLVKDRE 498
           GTPSLVNMIGNLVKDR+
Sbjct: 481 GTPSLVNMIGNLVKDRD 497

[Close]

BLAST of CmoCh03G001820 vs. TrEMBL
Match: A2TDC9_CITLA (Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 4.7e-273
Identity = 473/505 (93.66%), Postives = 487/505 (96.44%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWR--------NS 60
           MDTLLKINNKYGFLQ  HGVSEK+ SGVRSTK QS+E GFGHRKGR+KWR        +S
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKV-SGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           +LLELVPETKKENLE ELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  SLLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPY RVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAA+VLDATGFSRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILKERNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME+RLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF+GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDL GTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLNGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. TrEMBL
Match: A2TDC8_CITLA (Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1)

HSP 1 Score: 947.2 bits (2447), Expect = 8.0e-273
Identity = 473/505 (93.66%), Postives = 487/505 (96.44%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWR--------NS 60
           MDTLLKINNKYGFLQ  HGVSEK+ SGVRSTK QS+E GFGHRKGR+KWR        +S
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKV-SGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           +LLELVPETKKENLE ELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  SLLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPY RVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAA+VLDATG SRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGVSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILKERNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME+RLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF+GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. TrEMBL
Match: E5GC01_CUCME (Lycopene beta cyclase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 6.4e-270
Identity = 468/505 (92.67%), Postives = 483/505 (95.64%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKW--------RNS 60
           MDTLLKINNKYGFL+  HGVSEKL SGVR TK   +E GFG RKGR+K         RNS
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKL-SGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALLELVPETKKENLEFELPM+DPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  ALLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSL+ICNDGVTIQAA+VLDATGFSRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILK+RNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME RLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF+GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. TrEMBL
Match: A0A0A0L1H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G218350 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 1.2e-268
Identity = 467/505 (92.48%), Postives = 481/505 (95.25%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWR--------NS 60
           MDTLLKINNKYGFLQ  HGVSEKL SGVR TK   +E GFG RK R+K +        +S
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKL-SGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALLELVPETKKENLEFELPM+DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  ALLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSL+ICNDGVTIQAA+VLDATGFSRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILK+RNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME RL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. TAIR10
Match: AT3G10230.1 (AT3G10230.1 lycopene cyclase)

HSP 1 Score: 773.5 bits (1996), Expect = 8.0e-224
Identity = 389/506 (76.88%), Postives = 431/506 (85.18%), Query Frame = 1


Query: 1   MDTLLKINNKYGF-LQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWRNS------A 60
           MDTLLK  NK  F + Q HG      +    ++++      G +K  +K  +S      A
Sbjct: 1   MDTLLKTPNKLDFFIPQFHGFERLCSNNPYHSRVR-----LGVKKRAIKIVSSVVSGSAA 60

Query: 61  LLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LL+LVPETKKENL+FELP+YD SK  VVDLA+VGGGPAGLAVAQQVSEAGLSVC+IDPSP
Sbjct: 61  LLDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVV+ +E   KDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNPG 240
           QKCI+NGVKFH++KV  V+HEE  S ++C+DGV IQA+VVLDATGFSRCLVQY+KPYNPG
Sbjct: 181 QKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGI+AEV+ HPFDVDKMVFMDWRD HLD+   LKERNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGL+M DIQERM  RLKHLGI VK IEEDE CVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRLLG--SDGRFKGDEISSEVWKDLWPIERRRQ 420
           TAGMVHPSTGYMVARTLAAAPIVA+AIVR LG  S    +GD++S+EVW+DLWPIERRRQ
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQ 420

Query: 421 REFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASN 480
           REFFCFGMDILLKLDL  TRRFFDAFFDL+P YWHGFLSSRLFLPEL++FGLSLFS+ASN
Sbjct: 421 REFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASN 480

Query: 481 ASRLEIMAKGTPSLVNMIGNLVKDRE 498
            SRLEIM KGT  L  MI NLV+DR+
Sbjct: 481 TSRLEIMTKGTVPLAKMINNLVQDRD 501

[Close]

BLAST of CmoCh03G001820 vs. TAIR10
Match: AT5G57030.1 (AT5G57030.1 Lycopene beta/epsilon cyclase protein)

HSP 1 Score: 273.1 bits (697), Expect = 3.4e-73
Identity = 154/398 (38.69%), Postives = 228/398 (57.29%), Query Frame = 1


Query: 81  VDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTT 140
           +DL V+G GPAGLA+A + ++ GL V  I P   L + NNYGVW DEF  + L  C++  
Sbjct: 109 LDLVVIGCGPAGLALAAESAKLGLKVGLIGPD--LPFTNNYGVWEDEFNDLGLQKCIEHV 168

Query: 141 WSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCISNGVKFHEAKVIKVIH-EEFKSL 200
           W   +V+ ++     + R YGRV+R+ L  ++L++C+ +GV +  +KV  +    +   L
Sbjct: 169 WRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRL 228

Query: 201 LICNDGVTIQAAVVLDATGF-SRCLVQYNKPY-NPGYQVAYGILAEVEEHPFDVDKMVFM 260
           + C+D   I   +   A+G  S  L+QY         Q AYG+  EVE  P+D D+MVFM
Sbjct: 229 VACDDNNVIPCRLATVASGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFM 288

Query: 261 DWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLQMSDIQERMELRL 320
           D+RD     N  ++   ++ PTFLYAMP + +R+F EET L ++  +    ++ ++ LRL
Sbjct: 289 DYRDY---TNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRL 348

Query: 321 KHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVA 380
             LGI++    E+E   IP+GG LP   Q+ +  G  A MVHP+TGY V R+L+ AP  A
Sbjct: 349 DTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYA 408

Query: 381 SAIVRLLGSDGRFK-GDEISSEVWKDLWPIERRRQREFFCFGMDILLKLDLKGTRRFFDA 440
           S I  +L  +   +    IS + W  LWP ER+RQR FF FG+ ++++ D +G R FF  
Sbjct: 409 SVIAEILREETTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRT 468

Query: 441 FFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNASR 475
           FF L    W GFL S L   +L+LF L +F  + N  R
Sbjct: 469 FFRLPKWMWQGFLGSTLTSGDLVLFALYMFVISPNNLR 501

[Close]

BLAST of CmoCh03G001820 vs. NCBI nr
Match: gi|345461947|gb|AEN94902.1| (lycopene beta cyclase [Cucurbita moschata])

HSP 1 Score: 961.1 bits (2483), Expect = 7.7e-277
Identity = 472/497 (94.97%), Postives = 486/497 (97.79%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWRNSALLELVPE 60
           MDTLLKINNKYGFLQQSHGVSEKLR GVRSTKIQSRE GFGHRKGRVKWRNSALLELVPE
Sbjct: 1   MDTLLKINNKYGFLQQSHGVSEKLRGGVRSTKIQSREFGFGHRKGRVKWRNSALLELVPE 60

Query: 61  TKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNN 120
           TKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNN
Sbjct: 61  TKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNN 120

Query: 121 YGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCISNG 180
           YGVWVD+FEAMDLLDCLDTTWSGAVVFTN QSTKDL RPYGRVNRKQLKSK LQKCI+NG
Sbjct: 121 YGVWVDKFEAMDLLDCLDTTWSGAVVFTNGQSTKDLGRPYGRVNRKQLKSKFLQKCIANG 180

Query: 181 VKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNPGYQVAYGI 240
           VKFHEAKV+KVIHEEFKSLLICNDGVTIQAA+VLDATGFSRCLV+Y++PYNPGYQVAYGI
Sbjct: 181 VKFHEAKVVKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVRYDEPYNPGYQVAYGI 240

Query: 241 LAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIFLEETSLVA 300
           LAEVEEHPFDVDKMVFMDWRDSHLDNNM+LKERNSKIPTFLYAMPFSSNRIFLEETSLVA
Sbjct: 241 LAEVEEHPFDVDKMVFMDWRDSHLDNNMVLKERNSKIPTFLYAMPFSSNRIFLEETSLVA 300

Query: 301 RPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHP 360
           RPGLQMSDIQERM+ RLKHLGIKVKSIEEDEHCVIPMGG LPVLPQRVVGIGGTAGMVHP
Sbjct: 301 RPGLQMSDIQERMDARLKHLGIKVKSIEEDEHCVIPMGGQLPVLPQRVVGIGGTAGMVHP 360

Query: 361 STGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQREFFCFGMD 420
           STGYMVARTLAAAPIVA AIVR LGSDGRF+GDEISSEVW+DLWPIERRRQREFFCFGMD
Sbjct: 361 STGYMVARTLAAAPIVAGAIVRCLGSDGRFRGDEISSEVWRDLWPIERRRQREFFCFGMD 420

Query: 421 ILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNASRLEIMAK 480
           ILLKLDLKGTRR FDAFFDLEP YWHGFLSSRLFLPELILFGLSLFS+ASNASR+EIMAK
Sbjct: 421 ILLKLDLKGTRRLFDAFFDLEPHYWHGFLSSRLFLPELILFGLSLFSHASNASRVEIMAK 480

Query: 481 GTPSLVNMIGNLVKDRE 498
           GTPSLVNMIGNLVKDR+
Sbjct: 481 GTPSLVNMIGNLVKDRD 497

[Close]

BLAST of CmoCh03G001820 vs. NCBI nr
Match: gi|124108658|gb|ABM90918.1| (lycopene beta-cyclase [Citrullus lanatus])

HSP 1 Score: 948.0 bits (2449), Expect = 6.8e-273
Identity = 473/505 (93.66%), Postives = 487/505 (96.44%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWR--------NS 60
           MDTLLKINNKYGFLQ  HGVSEK+ SGVRSTK QS+E GFGHRKGR+KWR        +S
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKV-SGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           +LLELVPETKKENLE ELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  SLLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPY RVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAA+VLDATGFSRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILKERNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME+RLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF+GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDL GTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLNGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. NCBI nr
Match: gi|124108656|gb|ABM90917.1| (lycopene beta-cyclase [Citrullus lanatus])

HSP 1 Score: 947.2 bits (2447), Expect = 1.2e-272
Identity = 473/505 (93.66%), Postives = 487/505 (96.44%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWR--------NS 60
           MDTLLKINNKYGFLQ  HGVSEK+ SGVRSTK QS+E GFGHRKGR+KWR        +S
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKV-SGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           +LLELVPETKKENLE ELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  SLLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPY RVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAA+VLDATG SRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGVSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILKERNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME+RLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF+GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. NCBI nr
Match: gi|659115559|ref|XP_008457615.1| (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis melo])

HSP 1 Score: 937.6 bits (2422), Expect = 9.1e-270
Identity = 468/505 (92.67%), Postives = 483/505 (95.64%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKW--------RNS 60
           MDTLLKINNKYGFL+  HGVSEKL SGVR TK   +E GFG RKGR+K         RNS
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKL-SGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALLELVPETKKENLEFELPM+DPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  ALLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSL+ICNDGVTIQAA+VLDATGFSRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILK+RNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME RLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF+GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CmoCh03G001820 vs. NCBI nr
Match: gi|449466093|ref|XP_004150761.1| (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus])

HSP 1 Score: 933.3 bits (2411), Expect = 1.7e-268
Identity = 467/505 (92.48%), Postives = 481/505 (95.25%), Query Frame = 1


Query: 1   MDTLLKINNKYGFLQQSHGVSEKLRSGVRSTKIQSRELGFGHRKGRVKWR--------NS 60
           MDTLLKINNKYGFLQ  HGVSEKL SGVR TK   +E GFG RK R+K +        +S
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKL-SGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSS 60

Query: 61  ALLELVPETKKENLEFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALLELVPETKKENLEFELPM+DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS
Sbjct: 61  ALLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAVVLDATGFSRCLVQYNKPYNP 240
           LQKCISNGVKFHEAKVIKVIHEEFKSL+ICNDGVTIQAA+VLDATGFSRCLVQY+KPYNP
Sbjct: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLDNNMILKERNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGILAEVEEHPFDV+KMVFMDWRDSHL+NNMILK+RNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMELRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGLQMSDIQERME RL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRLLGSDGRFKGDEISSEVWKDLWPIERRRQR 420
           GTAGMVHPSTGYMVARTLAAAPIVASAIVR LGSDGRF GD ISSEVWKDLWPIERRRQR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQR 420

Query: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELILFGLSLFSNASNA 480
           EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+LFGLSLFS+ASNA
Sbjct: 421 EFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNA 480

Query: 481 SRLEIMAKGTPSLVNMIGNLVKDRE 498
           SRLEIMAKGTPSLVNMIGNLVKDR+
Sbjct: 481 SRLEIMAKGTPSLVNMIGNLVKDRD 504

The following BLAST results are available for this feature:

BLAST of CmoCh03G001820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LCYB_CAPAN	3.6e-234	81.36	Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE...	[more]
LCYB_SOLLC	4.0e-233	80.40	Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=1 SV=1	[more]
LCYB_TOBAC	2.2e-231	80.80	Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=1 SV=1	[more]
LCYB_ARATH	1.4e-222	76.88	Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=1 SV=1	[more]
LCYB_NARPS	1.9e-211	72.48	Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus ...	[more]

BLAST of CmoCh03G001820 vs. TrEMBL


Match Name	E-value	Identity	Description
G3LUM6_CUCMO	5.4e-277	94.97	Lycopene beta cyclase OS=Cucurbita moschata GN=LCYB PE=2 SV=1	[more]
A2TDC9_CITLA	4.7e-273	93.66	Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1	[more]
A2TDC8_CITLA	8.0e-273	93.66	Lycopene beta-cyclase OS=Citrullus lanatus GN=LCYB PE=2 SV=1	[more]
E5GC01_CUCME	6.4e-270	92.67	Lycopene beta cyclase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0L1H5_CUCSA	1.2e-268	92.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G218350 PE=4 SV=1	[more]

BLAST of CmoCh03G001820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10230.1	8.0e-224	76.88	lycopene cyclase	[more]
AT5G57030.1	3.4e-73	38.69	Lycopene beta/epsilon cyclase protein	[more]

BLAST of CmoCh03G001820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|345461947\|gb\|AEN94902.1\|	7.7e-277	94.97	lycopene beta cyclase [Cucurbita moschata]	[more]
gi\|124108658\|gb\|ABM90918.1\|	6.8e-273	93.66	lycopene beta-cyclase [Citrullus lanatus]	[more]
gi\|124108656\|gb\|ABM90917.1\|	1.2e-272	93.66	lycopene beta-cyclase [Citrullus lanatus]	[more]
gi\|659115559\|ref\|XP_008457615.1\|	9.1e-270	92.67	PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis melo]	[more]
gi\|449466093\|ref\|XP_004150761.1\|	1.7e-268	92.48	PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010108	Lycopene_cyclase_b/e
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016117	carotenoid biosynthetic process
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G001820.1	CmoCh03G001820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010108	Lycopene cyclase, beta/epsilon	TIGRFAMs	TIGR01790	TIGR01790	coord: 82..477 score: 5.1E
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 81..263 score: 4.1E-28coord: 346..384 score: 4.1
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 336..463 score: 5.37E-29coord: 80..241 score: 5.37
None	No IPR available	PANTHER	PTHR13789	MONOOXYGENASE	coord: 55..487 score:
None	No IPR available	PANTHER	PTHR13789:SF249	LYCOPENE BETA CYCLASE, CHLOROPLASTIC	coord: 55..487 score:
None	No IPR available	PFAM	PF05834	Lycopene_cycl	coord: 82..474 score: 6.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G001820	CmaCh07G013510	Cucurbita maxima (Rimu)	cmacmoB865
CmoCh03G001820	CmaCh03G002000	Cucurbita maxima (Rimu)	cmacmoB655
CmoCh03G001820	Cla005011	Watermelon (97103) v1	cmowmB630
CmoCh03G001820	MELO3C020744	Melon (DHL92) v3.5.1	cmomeB608
CmoCh03G001820	ClCG04G004090	Watermelon (Charleston Gray)	cmowcgB593
CmoCh03G001820	Lsi01G018030	Bottle gourd (USVL1VR-Ls)	cmolsiB584
CmoCh03G001820	Cp4.1LG01g17350	Cucurbita pepo (Zucchini)	cmocpeB617
CmoCh03G001820	Cp4.1LG19g00300	Cucurbita pepo (Zucchini)	cmocpeB622
CmoCh03G001820	Cla97C04G070940	Watermelon (97103) v2	cmowmbB666
CmoCh03G001820	Carg27661	Silver-seed gourd	carcmoB0310
CmoCh03G001820	Carg21111	Silver-seed gourd	carcmoB0644

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G001820	CmoCh07G013920	Cucurbita moschata (Rifu)	cmocmoB463

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G001820	Wax gourd	cmowgoB0795
CmoCh03G001820	Cucumber (Gy14) v1	cgycmoB0937
CmoCh03G001820	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G001820	Bottle gourd (USVL1VR-Ls)	cmolsiB600
CmoCh03G001820	Melon (DHL92) v3.6.1	cmomedB680
CmoCh03G001820	Melon (DHL92) v3.6.1	cmomedB697
CmoCh03G001820	Watermelon (97103) v2	cmowmbB647