CsaV3_4G022080 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G022080
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Lycopene beta cyclase
Location	chr4 : 13182946 .. 13186456 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATAACAACTTTTAAGAATCATGTTGATCTAGATTTACATTTAAACTAATATGAACTACCAAAGCATTAAAAAATGGTTCACTACTTTGCAAATCACACATCAAATCCTGGAATAAACATCAATTGAGTTCAAACAAAAACACCCACCATTCTATTTATCATCATCATACCATTTTTAAGCAGTGGAGAAAGCAAATTGAGCGACCGATATTCACTCTCAAGTCGCTATCAGTTATCACCACCATTAATTGGCGAGAGAATATGGAGCCATCCTCCAACTGTCGTCACTGCCAAAATCCCAATCTTCTCAAATTCCTCTAATTTCCATCTCTTCGAGACCAGTGGCCGGCGAAGTCAGTTCGTCAAATTTGGGACTGGCCATAACTCTACACATCCCTCCAATCCACTGGAACCAAATGGACATCCTTTGCGTCCTCAGGTTCGCCTCCAAACATAACCCCTCTTCATGTTTTATCCATTGATTTCCATTGAACTTATCCCTGTTCTTCTGAAGTTTTTGGGGATCTCTTGGAATTTTTCTGCACCCCATTTGGATCCTTCGTCTATTGGTTCGTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTCTTTTTTTGAGGTTTCTGGATATTGGGTTTCTGTGGGGATTCCCGTTTTAGCTTTGCTGAAAATTCTGTTTCTGTTGCTCTGTAGTTTCAATAGTTTGGGTTTTGGGAGTTTTGTGTTGACCTTTTAGTAAATCCATGGATACTTTGCTTAAAATCAATAACAAGTATGGTTTTCTGCAACCATTACATGGGGTTTCAGAAAAATTGAGTGGTGTGAGGGGTACGAAGTTTCACGGTCAGGAATTTGGATTTGGTCAAAGAAAGAGTCGTCTGAAATTGAAGAAAGGGGGTTGTGTTGGTGTGAAAAGTAGTGCTCTTTTGGAGCTTGTTCCTGAAACCAAGAAGGAAAATCTTGAGTTTGAACTTCCTATGTTTGATCCTTCGAAGGGCCTTGTTGTCGATCTCGCGGTTGTGGGTGGTGGCCCTGCAGGGCTTGCTGTTGCACAACAGGTCTCAGAGGCAGGTCTTTCAGTTTGTGCAATTGACCCATCCCCCAAGTTGATTTGGCCCAACAATTATGGGGTTTGGGTGGATGAATTTGAGGCAATGGATTTGCTTGATTGTCTTGACACGACTTGGTCCGGTGCTGTTGTGTTCACCAATGAACAATCAACAAAAGATCTTGCTCGACCTTATGGGAGGGTTAATAGAAAGCAGCTCAAGTCAAAAATGTTGCAGAAATGCATTTCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTATTAAAGTTATACATGAGGAGTTCAAATCTTTGATAATTTGCAATGATGGAGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTTGTCCAATATGATAAGCCTTACAATCCGGGCTACCAAGTAGCTTATGGGATTTTAGCTGAGGTGGAGGAACATCCATTCGACGTTAACAAGATGGTCTTTATGGACTGGAGGGATTCACATCTGAATAATAATATGATTTTGAAGGACCGAAATAGCAAAATTCCTACATTTCTTTATGCAATGCCCTTTTCATCAAATCGGATATTTCTAGAAGAAACTTCTCTGGTAGCTCGACCTGGATTACAAATGAGCGATATCCAGGAAAGAATGGAGGCAAGATTGAATCACTTGGGAATAAAAGTGAAAAGCATAGAAGAGGATGAGCATTGTGTCATCCCAATGGGTGGACCGCTGCCAGTTCTTCCTCAAAGAGTTGTTGGAATTGGTGGAACAGCAGGGATGGTGCACCCTTCAACTGGATATATGGTAGCAAGAACTCTAGCAGCAGCACCTATTGTTGCTAGTGCAATAGTTCGATGCCTTGGTTCAGATGGACGTTTCATGGGTGATGCAATATCCTCTGAAGTTTGGAAAGATCTATGGCCCATTGAAAGGAGGAGACAGAGGGAGTTTTTCTGTTTTGGGATGGATATCTTGTTGAAGCTGGATCTAAAGGGTACAAGAAGGTTTTTTGATGCATTTTTTGATCTTGAACCTCGTTATTGGCATGGATTCTTGTCATCACGACTGTTTCTTCCCGAGCTGTTACTCTTTGGGCTTTCCTTATTCTCTCACGCATCTAATGCCTCCAGGCTTGAGATCATGGCAAAGGGAACTCCATCTTTGGTAAACATGATCGGTAATCTGGTAAAGGATAGAGACTAAGATGAATATAGAGTTACTTTATTGTAAGCTAATCATCATACTGATGCAAGTGCATTATCACATTTACTTCTGCTGATGGTTGTTCATAAGATTATGAGTTAGTTATAGCTTATAGCCATTTCTCTCTTTAGCATGTTAATCCTAGTTCACACCTCATACGACTTCACAGAAAAGAGAAGTGCTTCAAAAGTCACCTGTCAAATATATACACTATACATATGTATATGCTTGAGACCTCATCGTTTTATGCACAATAATCATTGTAAATACCATAAAAGACTAAAAAACTAGGATAGTGTTGATTTCTTCATTATGTTCTGTGAATAGCCAGGACATTGAGGGATTTCTAAAGAAAAATTAAGGGAATCAAATCTTATTCATCTTTGTTCTTTTCATTAGATGCACCATTTTTCTTTTTTCTTTTTTCTTTTTTTGGTACAACCTCTCTTAATACATGACTTTAATTAATGTTATGTGGAGATAGAAATGATGGGAAATGGCTCTATGCAGATTGCTTTTCTCATAATTCACAATTGTTCATGTTTTCTTTTGAGATACTTGTTTAAAGTTTAGGGTATTTCTACCTATCTGAAGGTTTGGAGTTGGGATTAGTATGATTGCGAACTTTGTTGTTTTTGTGTTGAAGTTTCCTTAATATTGGTGTAGCTGTTCCACAGATGTCTAGCATGTGAAATTATGTCAGACTGTGATTGAGAGTAATGGCATCTTTAGAAAGCCTTCCTGTAGCATGCCTGAAATGTTCCTGACCTACCACCATACAGATTCATGGTGGAGGTCAGGTTCAGAAATGAAACAATGAGTCTTTCATTTGGGCTGAATACTCTCTAGTCGAAATTCTGGGTCATTGAAGTGTAACGCATCCGCCGCACTTGTGTGTAATGGGTGCTTTATCTAGATAGAGTATTAGATTAAGGATCTTCTGCCCATTCTTGCAAATTTCATGCTGAAGCGGTCGGTCTGTAGACGTGTTCTTGTTCAGATTTATGCTCGACCCATCTCTCTATCTTATTCCTCCAAGTATATACCTTAGTAACCAAGTGTCTATCGTTAAGTTTGGTTCGATTTCCAATAATCATACAGGTGATACCATGTCTATGGCTGACTTGGTGCTATTACAGTTCGATGAATGAAGGTATTTTCAAGTGGTTGGTCATGTCATTTAGTTTTATAAATAAGTGCCTAAAACTTTCATGAGGTTAGTAACTTAGTTTTTACTTTTTATTACCTTTGTTTA

mRNA sequence

ATGGATACTTTGCTTAAAATCAATAACAAGTATGGTTTTCTGCAACCATTACATGGGGTTTCAGAAAAATTGAGTGGTGTGAGGGGTACGAAGTTTCACGGTCAGGAATTTGGATTTGGTCAAAGAAAGAGTCGTCTGAAATTGAAGAAAGGGGGTTGTGTTGGTGTGAAAAGTAGTGCTCTTTTGGAGCTTGTTCCTGAAACCAAGAAGGAAAATCTTGAGTTTGAACTTCCTATGTTTGATCCTTCGAAGGGCCTTGTTGTCGATCTCGCGGTTGTGGGTGGTGGCCCTGCAGGGCTTGCTGTTGCACAACAGGTCTCAGAGGCAGGTCTTTCAGTTTGTGCAATTGACCCATCCCCCAAGTTGATTTGGCCCAACAATTATGGGGTTTGGGTGGATGAATTTGAGGCAATGGATTTGCTTGATTGTCTTGACACGACTTGGTCCGGTGCTGTTGTGTTCACCAATGAACAATCAACAAAAGATCTTGCTCGACCTTATGGGAGGGTTAATAGAAAGCAGCTCAAGTCAAAAATGTTGCAGAAATGCATTTCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTATTAAAGTTATACATGAGGAGTTCAAATCTTTGATAATTTGCAATGATGGAGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTTGTCCAATATGATAAGCCTTACAATCCGGGCTACCAAGTAGCTTATGGGATTTTAGCTGAGGTGGAGGAACATCCATTCGACGTTAACAAGATGGTCTTTATGGACTGGAGGGATTCACATCTGAATAATAATATGATTTTGAAGGACCGAAATAGCAAAATTCCTACATTTCTTTATGCAATGCCCTTTTCATCAAATCGGATATTTCTAGAAGAAACTTCTCTGGTAGCTCGACCTGGATTACAAATGAGCGATATCCAGGAAAGAATGGAGGCAAGATTGAATCACTTGGGAATAAAAGTGAAAAGCATAGAAGAGGATGAGCATTGTGTCATCCCAATGGGTGGACCGCTGCCAGTTCTTCCTCAAAGAGTTGTTGGAATTGGTGGAACAGCAGGGATGGTGCACCCTTCAACTGGATATATGGTAGCAAGAACTCTAGCAGCAGCACCTATTGTTGCTAGTGCAATAGTTCGATGCCTTGGTTCAGATGGACGTTTCATGGGTGATGCAATATCCTCTGAAGTTTGGAAAGATCTATGGCCCATTGAAAGGAGGAGACAGAGGGAGTTTTTCTGTTTTGGGATGGATATCTTGTTGAAGCTGGATCTAAAGGGTACAAGAAGGTTTTTTGATGCATTTTTTGATCTTGAACCTCGTTATTGGCATGGATTCTTGTCATCACGACTGTTTCTTCCCGAGCTGTTACTCTTTGGGCTTTCCTTATTCTCTCACGCATCTAATGCCTCCAGGCTTGAGATCATGGCAAAGGGAACTCCATCTTTGGTAAACATGATCGGTAATCTGGTAAAGGATAGAGACTAA

Coding sequence (CDS)

ATGGATACTTTGCTTAAAATCAATAACAAGTATGGTTTTCTGCAACCATTACATGGGGTTTCAGAAAAATTGAGTGGTGTGAGGGGTACGAAGTTTCACGGTCAGGAATTTGGATTTGGTCAAAGAAAGAGTCGTCTGAAATTGAAGAAAGGGGGTTGTGTTGGTGTGAAAAGTAGTGCTCTTTTGGAGCTTGTTCCTGAAACCAAGAAGGAAAATCTTGAGTTTGAACTTCCTATGTTTGATCCTTCGAAGGGCCTTGTTGTCGATCTCGCGGTTGTGGGTGGTGGCCCTGCAGGGCTTGCTGTTGCACAACAGGTCTCAGAGGCAGGTCTTTCAGTTTGTGCAATTGACCCATCCCCCAAGTTGATTTGGCCCAACAATTATGGGGTTTGGGTGGATGAATTTGAGGCAATGGATTTGCTTGATTGTCTTGACACGACTTGGTCCGGTGCTGTTGTGTTCACCAATGAACAATCAACAAAAGATCTTGCTCGACCTTATGGGAGGGTTAATAGAAAGCAGCTCAAGTCAAAAATGTTGCAGAAATGCATTTCCAATGGTGTTAAGTTTCATGAAGCTAAAGTTATTAAAGTTATACATGAGGAGTTCAAATCTTTGATAATTTGCAATGATGGAGTGACCATTCAAGCTGCCATTGTTCTTGATGCTACTGGCTTCTCTCGATGCCTTGTCCAATATGATAAGCCTTACAATCCGGGCTACCAAGTAGCTTATGGGATTTTAGCTGAGGTGGAGGAACATCCATTCGACGTTAACAAGATGGTCTTTATGGACTGGAGGGATTCACATCTGAATAATAATATGATTTTGAAGGACCGAAATAGCAAAATTCCTACATTTCTTTATGCAATGCCCTTTTCATCAAATCGGATATTTCTAGAAGAAACTTCTCTGGTAGCTCGACCTGGATTACAAATGAGCGATATCCAGGAAAGAATGGAGGCAAGATTGAATCACTTGGGAATAAAAGTGAAAAGCATAGAAGAGGATGAGCATTGTGTCATCCCAATGGGTGGACCGCTGCCAGTTCTTCCTCAAAGAGTTGTTGGAATTGGTGGAACAGCAGGGATGGTGCACCCTTCAACTGGATATATGGTAGCAAGAACTCTAGCAGCAGCACCTATTGTTGCTAGTGCAATAGTTCGATGCCTTGGTTCAGATGGACGTTTCATGGGTGATGCAATATCCTCTGAAGTTTGGAAAGATCTATGGCCCATTGAAAGGAGGAGACAGAGGGAGTTTTTCTGTTTTGGGATGGATATCTTGTTGAAGCTGGATCTAAAGGGTACAAGAAGGTTTTTTGATGCATTTTTTGATCTTGAACCTCGTTATTGGCATGGATTCTTGTCATCACGACTGTTTCTTCCCGAGCTGTTACTCTTTGGGCTTTCCTTATTCTCTCACGCATCTAATGCCTCCAGGCTTGAGATCATGGCAAAGGGAACTCCATCTTTGGTAAACATGATCGGTAATCTGGTAAAGGATAGAGACTAA

Protein sequence

MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSALLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFLEETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQREFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNASRLEIMAKGTPSLVNMIGNLVKDRD

Homology

[Close]

BLAST of CsaV3_4G022080 vs. NCBI nr
Match: XP_004150761.1 (PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus] >KGN53976.1 hypothetical protein Csa_4G218350 [Cucumis sativus])

HSP 1 Score: 1019.2 bits (2634), Expect = 4.7e-294
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. NCBI nr
Match: ADN34000.1 (lycopene beta cyclase [Cucumis melo subsp. melo])

HSP 1 Score: 1005.4 bits (2598), Expect = 7.0e-290
Identity = 495/504 (98.21%), Postives = 500/504 (99.21%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVSEKLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV++SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. NCBI nr
Match: AGN48016.1 (lycopene beta cyclase [Cucumis melo])

HSP 1 Score: 1003.8 bits (2594), Expect = 2.0e-289
Identity = 493/504 (97.82%), Postives = 500/504 (99.21%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVS+KLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV+SSA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSDKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRSSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFD+NKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFS+NRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDINKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSTNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. NCBI nr
Match: NP_001315390.1 (lycopene beta cyclase, chloroplastic [Cucumis melo] >ADD14031.1 lycopene beta cyclase [Cucumis melo])

HSP 1 Score: 1000.0 bits (2584), Expect = 3.0e-288
Identity = 492/504 (97.62%), Postives = 499/504 (99.01%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVSEKLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV++SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQL+SKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLESKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHE+FKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEKFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGF SSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFSSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. NCBI nr
Match: ABM90918.1 (lycopene beta-cyclase [Citrullus lanatus])

HSP 1 Score: 981.1 bits (2535), Expect = 1.4e-282
Identity = 483/504 (95.83%), Postives = 491/504 (97.42%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFLQPLHGVSEK+SGVR TKF  QEFGFG RK RLK +KGGC+ V+SS+
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKVSGVRSTKFQSQEFGFGHRKGRLKWRKGGCLNVRSSS 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLE ELPM+DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEVELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPY RVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYARVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSL+ICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLLICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILK+RNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKERNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERME RL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEVRLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDL GTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLNGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. TAIR10
Match: AT3G10230.1 (lycopene cyclase)

HSP 1 Score: 776.9 bits (2005), Expect = 7.4e-225
Identity = 391/507 (77.12%), Postives = 429/507 (84.62%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQP-LHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSS 60
           MDTLLK  NK  F  P  HG     S      +H +    G +K  +K+      G  S+
Sbjct: 1   MDTLLKTPNKLDFFIPQFHGFERLCS---NNPYHSR-VRLGVKKRAIKIVSSVVSG--SA 60

Query: 61  ALLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALL+LVPETKKENL+FELP++D SK  VVDLA+VGGGPAGLAVAQQVSEAGLSVC+IDPS
Sbjct: 61  ALLDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVV+ +E   KDL+RPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240
           LQKCI+NGVKFH++KV  V+HEE  S ++C+DGV IQA++VLDATGFSRCLVQYDKPYNP
Sbjct: 181 LQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGI+AEV+ HPFDV+KMVFMDWRD HL++   LK+RNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGL+M DIQERM ARL HLGI VK IEEDE CVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLG--SDGRFMGDAISSEVWKDLWPIERRR 420
           GTAGMVHPSTGYMVARTLAAAPIVA+AIVR LG  S     GD +S+EVW+DLWPIERRR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRR 420

Query: 421 QREFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHAS 480
           QREFFCFGMDILLKLDL  TRRFFDAFFDL+P YWHGFLSSRLFLPELL+FGLSLFSHAS
Sbjct: 421 QREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHAS 480

Query: 481 NASRLEIMAKGTPSLVNMIGNLVKDRD 505
           N SRLEIM KGT  L  MI NLV+DRD
Sbjct: 481 NTSRLEIMTKGTVPLAKMINNLVQDRD 501

[Close]

BLAST of CsaV3_4G022080 vs. TAIR10
Match: AT5G57030.1 (Lycopene beta/epsilon cyclase protein)

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-72
Identity = 156/417 (37.41%), Postives = 236/417 (56.59%), Query Frame = 0


Query: 69  KKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSPKLIWPNNY 128
           ++  L  +LP      G  +DL V+G GPAGLA+A + ++ GL V  I   P L + NNY
Sbjct: 91  EQSKLVDKLPPISIGDG-ALDLVVIGCGPAGLALAAESAKLGLKVGLI--GPDLPFTNNY 150

Query: 129 GVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKMLQKCISNGV 188
           GVW DEF  + L  C++  W   +V+ ++     + R YGRV+R+ L  ++L++C+ +GV
Sbjct: 151 GVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGV 210

Query: 189 KFHEAKVIKVIH-EEFKSLIICNDGVTIQAAIVLDATG-FSRCLVQYD-KPYNPGYQVAY 248
            +  +KV  +    +   L+ C+D   I   +   A+G  S  L+QY+        Q AY
Sbjct: 211 SYLSSKVDSITEASDGLRLVACDDNNVIPCRLATVASGAASGKLLQYEVGGPRVCVQTAY 270

Query: 249 GILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFLEETSL 308
           G+  EVE  P+D ++MVFMD+RD     N  ++   ++ PTFLYAMP + +R+F EET L
Sbjct: 271 GVEVEVENSPYDPDQMVFMDYRD---YTNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCL 330

Query: 309 VARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMV 368
            ++  +    ++ ++  RL+ LGI++    E+E   IP+GG LP   Q+ +  G  A MV
Sbjct: 331 ASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMV 390

Query: 369 HPSTGYMVARTLAAAPIVASAIVRCLGSD-GRFMGDAISSEVWKDLWPIERRRQREFFCF 428
           HP+TGY V R+L+ AP  AS I   L  +  + +   IS + W  LWP ER+RQR FF F
Sbjct: 391 HPATGYSVVRSLSEAPKYASVIAEILREETTKQINSNISRQAWDTLWPPERKRQRAFFLF 450

Query: 429 GMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNASR 482
           G+ ++++ D +G R FF  FF L    W GFL S L   +L+LF L +F  + N  R
Sbjct: 451 GLALIVQFDTEGIRSFFRTFFRLPKWMWQGFLGSTLTSGDLVLFALYMFVISPNNLR 501

[Close]

BLAST of CsaV3_4G022080 vs. Swiss-Prot
Match: sp|Q43503|LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=LCY1 PE=1 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 1.1e-238
Identity = 407/504 (80.75%), Postives = 443/504 (87.90%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLK  N   FL P HG + K S  R  K H     FG RK    L +  CV   SSA
Sbjct: 1   MDTLLKTPNNLEFLNPHHGFAVKASTFRSEKHH----NFGSRKFCETLGRSVCVKGSSSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENL+FELPM+DPSKG+VVDLAVVGGGPAGLAVAQQVSEAGLSVC+IDP+P
Sbjct: 61  LLELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLD TWSGA V+ ++ + KDL RPYGRVNRKQLKSKM+
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMM 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCI NGVKFH+AKVIKVIHEE KS++ICNDG+TIQA +VLDATGFSR LVQYDKPYNPG
Sbjct: 181 QKCIMNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHL NN  LK+RNS+IPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGL++ DIQERM ARLNHLGIKVKSIEEDEHC+IPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAP+VA+AI++ LGS+    G+ +S+ VWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPVVANAIIQYLGSERSHSGNELSTAVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDL  TRRFFDAFFDLEPRYWHGFLSSRLFLPEL++FGLSLFSHASN S
Sbjct: 421 FFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           R EIM KGT  LVNMI NL++D++
Sbjct: 481 RFEIMTKGTVPLVNMINNLLQDKE 500

[Close]

BLAST of CsaV3_4G022080 vs. Swiss-Prot
Match: sp|Q43578|LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=LCY1 PE=1 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 1.4e-236
Identity = 405/504 (80.36%), Postives = 438/504 (86.90%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLK  NK  FL P+HG S K S     K H     FG RK      KG CV  KSSA
Sbjct: 1   MDTLLKTPNKLEFLHPVHGFSVKASSFNSVKPH----KFGSRKICENWGKGVCVKAKSSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENL+FELPM+DPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSV +IDPSP
Sbjct: 61  LLELVPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVVSIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLD TWSG VV+ ++ +TKDL RPYGRVNRKQLKSKM+
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMM 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCI NGVKFH AKVIKVIHEE KS++ICNDGVTIQA +VLDATGFSRCLVQYDKPY PG
Sbjct: 181 QKCILNGVKFHHAKVIKVIHEEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYKPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFD +KMV MDWRDSHL NNM LK+RN K+PTFLYAMPFSSN+IFL
Sbjct: 241 YQVAYGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGL+M DIQERM ARLNHLGIKVKSIEEDEHCVIPMGG LPV+PQRVVG GG
Sbjct: 301 EETSLVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGSLPVIPQRVVGTGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAG+VHPSTGYMVARTLAAAP+VA+AI+  LGS+   +G+ +S+ VWKDLWPIERRRQRE
Sbjct: 361 TAGLVHPSTGYMVARTLAAAPVVANAIIHYLGSEKDLLGNELSAAVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDL  TRRFFDAFFDLEPRYWHGFLSSRL+LPEL+ FGLSLFS ASN S
Sbjct: 421 FFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLYLPELIFFGLSLFSRASNTS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           R+EIM KGT  LVNMI NL++D +
Sbjct: 481 RIEIMTKGTLPLVNMINNLLQDTE 500

[Close]

BLAST of CsaV3_4G022080 vs. Swiss-Prot
Match: sp|Q43415|LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum OX=4072 GN=LCY1 PE=2 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 9.8e-235
Identity = 406/509 (79.76%), Postives = 445/509 (87.43%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKL---SGVRGTKFHGQEF--GFGQRKSRLKLKKGGCVG 60
           MDTLL+  N   F   LHG   K+   S V+  KF  ++F  G G R          CV 
Sbjct: 1   MDTLLRTPNNLEF---LHGFGVKVSAFSSVKSQKFGAKKFCEGLGSRSV--------CVK 60

Query: 61  VKSSALLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCA 120
             SSALLELVPETKKENL+FELPM+DPSKG+VVDLAVVGGGPAGLAVAQQVSEAGLSVC+
Sbjct: 61  ASSSALLELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCS 120

Query: 121 IDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQL 180
           IDP+PKLIWPNNYGVWVDEFEAMDLLDCLD TWSGA V+ ++++TKDL RPYGRVNRKQL
Sbjct: 121 IDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQL 180

Query: 181 KSKMLQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDK 240
           KSKM+QKCI NGVKFH+AKVIKVIHEE KS++ICNDG+TIQA +VLDATGFSR LVQYDK
Sbjct: 181 KSKMMQKCILNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDK 240

Query: 241 PYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSS 300
           PYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHL NN+ LK+RNS+IPTFLYAMPFSS
Sbjct: 241 PYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSS 300

Query: 301 NRIFLEETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRV 360
           NRIFLEETSLVARPGL M DIQERM ARL+HLGIKVKSIEEDEHCVIPMGGPLPVLPQRV
Sbjct: 301 NRIFLEETSLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPMGGPLPVLPQRV 360

Query: 361 VGIGGTAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIER 420
           VGIGGTAGMVHPSTGYMVARTLAAAP+VA+AI++ L S+    GD +S+ VWKDLWPIER
Sbjct: 361 VGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYLSSERSHSGDELSAAVWKDLWPIER 420

Query: 421 RRQREFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSH 480
           RRQREFFCFGMDILLKLDL  TRRFFDAFFDLEPRYWHGFLSSRLFLPEL++FGLSLFSH
Sbjct: 421 RRQREFFCFGMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSH 480

Query: 481 ASNASRLEIMAKGTPSLVNMIGNLVKDRD 505
           ASN SRLEIM KGT  LV+MI NL++D++
Sbjct: 481 ASNTSRLEIMTKGTLPLVHMINNLLQDKE 498

[Close]

BLAST of CsaV3_4G022080 vs. Swiss-Prot
Match: sp|Q38933|LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LCY1 PE=1 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 1.3e-223
Identity = 391/507 (77.12%), Postives = 429/507 (84.62%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQP-LHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSS 60
           MDTLLK  NK  F  P  HG     S      +H +    G +K  +K+      G  S+
Sbjct: 1   MDTLLKTPNKLDFFIPQFHGFERLCS---NNPYHSR-VRLGVKKRAIKIVSSVVSG--SA 60

Query: 61  ALLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPS 120
           ALL+LVPETKKENL+FELP++D SK  VVDLA+VGGGPAGLAVAQQVSEAGLSVC+IDPS
Sbjct: 61  ALLDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPS 120

Query: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKM 180
           PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVV+ +E   KDL+RPYGRVNRKQLKSKM
Sbjct: 121 PKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKM 180

Query: 181 LQKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNP 240
           LQKCI+NGVKFH++KV  V+HEE  S ++C+DGV IQA++VLDATGFSRCLVQYDKPYNP
Sbjct: 181 LQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNP 240

Query: 241 GYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIF 300
           GYQVAYGI+AEV+ HPFDV+KMVFMDWRD HL++   LK+RNSKIPTFLYAMPFSSNRIF
Sbjct: 241 GYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIF 300

Query: 301 LEETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIG 360
           LEETSLVARPGL+M DIQERM ARL HLGI VK IEEDE CVIPMGGPLPVLPQRVVGIG
Sbjct: 301 LEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIG 360

Query: 361 GTAGMVHPSTGYMVARTLAAAPIVASAIVRCLG--SDGRFMGDAISSEVWKDLWPIERRR 420
           GTAGMVHPSTGYMVARTLAAAPIVA+AIVR LG  S     GD +S+EVW+DLWPIERRR
Sbjct: 361 GTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRR 420

Query: 421 QREFFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHAS 480
           QREFFCFGMDILLKLDL  TRRFFDAFFDL+P YWHGFLSSRLFLPELL+FGLSLFSHAS
Sbjct: 421 QREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHAS 480

Query: 481 NASRLEIMAKGTPSLVNMIGNLVKDRD 505
           N SRLEIM KGT  L  MI NLV+DRD
Sbjct: 481 NTSRLEIMTKGTVPLAKMINNLVQDRD 501

[Close]

BLAST of CsaV3_4G022080 vs. Swiss-Prot
Match: sp|Q40424|LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus OX=39639 GN=LCY1 PE=2 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 2.6e-219
Identity = 372/504 (73.81%), Postives = 428/504 (84.92%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLL+ +N+   L PLH ++++             F F  RK   K  + G +GV S+ 
Sbjct: 1   MDTLLRTHNRLELLYPLHELAKRHFLSPSPNPQNPNFKFFSRKPYQKKCRNGYIGVSSNQ 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LL+LVPE KKE+LEF+LP++DPSK L +DLAVVGGGP   + +  +   GLSV +IDP+P
Sbjct: 61  LLDLVPEIKKEHLEFDLPLYDPSKALTLDLAVVGGGPLARSCSTSLG-GGLSVVSIDPNP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFE MDLLDCLD TWSGA+V+ +++STK+L+RPY RVNRK LKSKM+
Sbjct: 121 KLIWPNNYGVWVDEFEDMDLLDCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMM 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           +KC+SNGV+FH+A V+K +HEE KS +IC+DGVTI A +VLDATGFSRCLVQYDKPYNPG
Sbjct: 181 KKCVSNGVRFHQATVVKAMHEEEKSYLICSDGVTIDARVVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDV+KMVFMDWRDSHLN    L +RN+KIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGL+M DIQERM ARLNHLGI++KSIEEDE CVIPMGGPLPV+PQRVVGIGG
Sbjct: 301 EETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPMGGPLPVIPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVA++IV+ L SD    G+ +S++VWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVANSIVQYLVSDSGLSGNDLSADVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDL+GTRRFFDAFFDLEPRYWHGFLSSRLFLPEL+ FGLSLFSHASN  
Sbjct: 421 FFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELVPFGLSLFSHASNTC 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           +LEIMAKGT  LVNMI NLV+DRD
Sbjct: 481 KLEIMAKGTLPLVNMINNLVQDRD 503

[Close]

BLAST of CsaV3_4G022080 vs. TrEMBL
Match: tr|A0A0A0L1H5|A0A0A0L1H5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218350 PE=4 SV=1)

HSP 1 Score: 1019.2 bits (2634), Expect = 3.1e-294
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA
Sbjct: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. TrEMBL
Match: tr|A0A1S3C5G8|A0A1S3C5G8_CUCME (lycopene beta cyclase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497264 PE=4 SV=1)

HSP 1 Score: 1005.4 bits (2598), Expect = 4.7e-290
Identity = 495/504 (98.21%), Postives = 500/504 (99.21%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVSEKLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV++SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. TrEMBL
Match: tr|E5GC01|E5GC01_CUCME (Lycopene beta cyclase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1005.4 bits (2598), Expect = 4.7e-290
Identity = 495/504 (98.21%), Postives = 500/504 (99.21%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVSEKLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV++SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. TrEMBL
Match: tr|T1RRM3|T1RRM3_CUCME (Lycopene beta cyclase OS=Cucumis melo OX=3656 GN=LBCY PE=4 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 1.4e-289
Identity = 493/504 (97.82%), Postives = 500/504 (99.21%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVS+KLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV+SSA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSDKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRSSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQLKSKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLKSKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFD+NKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFS+NRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDINKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSTNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

[Close]

BLAST of CsaV3_4G022080 vs. TrEMBL
Match: tr|D3YGT4|D3YGT4_CUCME (Lycopene beta cyclase OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 1000.0 bits (2584), Expect = 2.0e-288
Identity = 492/504 (97.62%), Postives = 499/504 (99.01%), Query Frame = 0


Query: 1   MDTLLKINNKYGFLQPLHGVSEKLSGVRGTKFHGQEFGFGQRKSRLKLKKGGCVGVKSSA 60
           MDTLLKINNKYGFL+PLHGVSEKLSGVRGTKFHGQEFGFGQRK RLKL+KGGCVGV++SA
Sbjct: 1   MDTLLKINNKYGFLKPLHGVSEKLSGVRGTKFHGQEFGFGQRKGRLKLRKGGCVGVRNSA 60

Query: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120
           LLELVPETKKENLEFELPMFDPSKGLVVDL VVGGGPAGLAVAQQVSEAGLSVCAIDPSP
Sbjct: 61  LLELVPETKKENLEFELPMFDPSKGLVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPSP 120

Query: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLARPYGRVNRKQLKSKML 180
           KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDL+RPYGRVNRKQL+SKML
Sbjct: 121 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFTNEQSTKDLSRPYGRVNRKQLESKML 180

Query: 181 QKCISNGVKFHEAKVIKVIHEEFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240
           QKCISNGVKFHEAKVIKVIHE+FKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG
Sbjct: 181 QKCISNGVKFHEAKVIKVIHEKFKSLIICNDGVTIQAAIVLDATGFSRCLVQYDKPYNPG 240

Query: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300
           YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL
Sbjct: 241 YQVAYGILAEVEEHPFDVNKMVFMDWRDSHLNNNMILKDRNSKIPTFLYAMPFSSNRIFL 300

Query: 301 EETSLVARPGLQMSDIQERMEARLNHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360
           EETSLVARPGLQMSDIQERMEARL HLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG
Sbjct: 301 EETSLVARPGLQMSDIQERMEARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 360

Query: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFMGDAISSEVWKDLWPIERRRQRE 420
           TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRF GDAISSEVWKDLWPIERRRQRE
Sbjct: 361 TAGMVHPSTGYMVARTLAAAPIVASAIVRCLGSDGRFRGDAISSEVWKDLWPIERRRQRE 420

Query: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLLFGLSLFSHASNAS 480
           FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGF SSRLFLPELLLFGLSLFSHASNAS
Sbjct: 421 FFCFGMDILLKLDLKGTRRFFDAFFDLEPRYWHGFSSSRLFLPELLLFGLSLFSHASNAS 480

Query: 481 RLEIMAKGTPSLVNMIGNLVKDRD 505
           RLEIMAKGTPSLVNMIGNLVKDRD
Sbjct: 481 RLEIMAKGTPSLVNMIGNLVKDRD 504

The following BLAST results are available for this feature:

BLAST of CsaV3_4G022080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150761.1	4.7e-294	100.00	PREDICTED: lycopene beta cyclase, chloroplastic [Cucumis sativus] >KGN53976.1 hy...	[more]
ADN34000.1	7.0e-290	98.21	lycopene beta cyclase [Cucumis melo subsp. melo]	[more]
AGN48016.1	2.0e-289	97.82	lycopene beta cyclase [Cucumis melo]	[more]
NP_001315390.1	3.0e-288	97.62	lycopene beta cyclase, chloroplastic [Cucumis melo] >ADD14031.1 lycopene beta cy...	[more]
ABM90918.1	1.4e-282	95.83	lycopene beta-cyclase [Citrullus lanatus]	[more]

BLAST of CsaV3_4G022080 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10230.1	7.4e-225	77.12	lycopene cyclase	[more]
AT5G57030.1	1.7e-72	37.41	Lycopene beta/epsilon cyclase protein	[more]

BLAST of CsaV3_4G022080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q43503\|LCYB_SOLLC	1.1e-238	80.75	Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=LCY1 PE=...	[more]
sp\|Q43578\|LCYB_TOBAC	1.4e-236	80.36	Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=LCY1 PE=1 S...	[more]
sp\|Q43415\|LCYB_CAPAN	9.8e-235	79.76	Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum OX=4072 GN...	[more]
sp\|Q38933\|LCYB_ARATH	1.3e-223	77.12	Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LCY1 PE=...	[more]
sp\|Q40424\|LCYB_NARPS	2.6e-219	73.81	Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus ...	[more]

BLAST of CsaV3_4G022080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1H5\|A0A0A0L1H5_CUCSA	3.1e-294	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218350 PE=4 SV=1	[more]
tr\|A0A1S3C5G8\|A0A1S3C5G8_CUCME	4.7e-290	98.21	lycopene beta cyclase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497264 PE=...	[more]
tr\|E5GC01\|E5GC01_CUCME	4.7e-290	98.21	Lycopene beta cyclase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|T1RRM3\|T1RRM3_CUCME	1.4e-289	97.82	Lycopene beta cyclase OS=Cucumis melo OX=3656 GN=LBCY PE=4 SV=1	[more]
tr\|D3YGT4\|D3YGT4_CUCME	2.0e-288	97.62	Lycopene beta cyclase OS=Cucumis melo OX=3656 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016117	carotenoid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **INTERPRO**
Term	Definition
IPR010108	Lycopene_cyclase_b/e
IPR036188	FAD/NAD-bd_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0016853	isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G022080.1	CsaV3_4G022080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	G3DSA:3.50.50.60		coord: 86..423 e-value: 8.4E-25 score: 89.7
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	coord: 343..470 coord: 88..248
IPR010108	Lycopene cyclase, beta/epsilon	TIGRFAM	TIGR01790	TIGR01790	coord: 89..484 e-value: 3.2E-152 score: 505.1
None	No IPR available	PFAM	PF05834	Lycopene_cycl	coord: 89..481 e-value: 1.8E-145 score: 484.7
None	No IPR available	PANTHER	PTHR43876:SF2	LYCOPENE BETA CYCLASE, CHLOROPLASTIC	coord: 35..504
None	No IPR available	PANTHER	PTHR43876	FAMILY NOT NAMED	coord: 35..504

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G022080	CSPI04G11950	Wild cucumber (PI 183967)	cpicucB215
CsaV3_4G022080	CmoCh07G013920	Cucurbita moschata (Rifu)	cmocucB1003
CsaV3_4G022080	Cp4.1LG19g00300	Cucurbita pepo (Zucchini)	cpecucB0614
CsaV3_4G022080	CsGy4G012250	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G022080	Carg21111	Silver-seed gourd	carcucB0513
CsaV3_4G022080	MELO3C020744	Melon (DHL92) v3.5.1	cucmeB344
CsaV3_4G022080	Lsi01G018030	Bottle gourd (USVL1VR-Ls)	cuclsiB284
CsaV3_4G022080	Bhi03G001988	Wax gourd	cucwgoB405

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G022080	Silver-seed gourd	carcucB0559
CsaV3_4G022080	Cucumber (Gy14) v1	cgycucB231
CsaV3_4G022080	Cucurbita maxima (Rimu)	cmacucB0660
CsaV3_4G022080	Cucurbita maxima (Rimu)	cmacucB0726
CsaV3_4G022080	Cucurbita moschata (Rifu)	cmocucB0645
CsaV3_4G022080	Cucurbita moschata (Rifu)	cmocucB0713
CsaV3_4G022080	Cucurbita pepo (Zucchini)	cpecucB0346
CsaV3_4G022080	Cucurbita pepo (Zucchini)	cpecucB0908
CsaV3_4G022080	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G022080	Melon (DHL92) v3.5.1	cucmeB294
CsaV3_4G022080	Watermelon (Charleston Gray)	cucwcgB305
CsaV3_4G022080	Watermelon (97103) v1	cucwmB364