Cp4.1LG18g02150 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g02150
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein of unknown function, DUF538
Location	Cp4.1LG18 : 3774605 .. 3777497 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATCCCTTCCCCACACCTCAAACCCTCCATCATCAATGGCTTCCTTCTCAAGAAACCTCTCCCCATTTTCACTATTCCTTCTAATTCTCGCCATTTCCACCCAAACCCATCTCTCCTTTTCATCAATAGACAAACCCCTCAACCCAACAGACATCCACGAACTTCTACTCCGTTACGGTTTTCCCGCTGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGCGCCTTCGAAATCGAACTCGAAACCGATTGCTATGTGATGCTCAGTGAGCTGGTTTACTACGAAAAGAAAATCACGGGGAAATTGAGCTATGGGTCTGTGACCGATGTTTCTGGGATTCAAGTTAAGAAGCTGTTCTTGTGGGTCTCTGTTTCTGGGTTCAAGTCTAATCAAGGATCTGGAACCATCGTGTTCTTTGTCGGACCCTTGTCTGAAACTTTTCCGGCAGAAATGTTCCGGACGATTCCTGGTTGTAGAAGGAAGGCTTGCCTAGGAGGAAGAACAGAAGCCATATGAGGTAATTTTGATATGGGTTGGATTGGATTTGATTTTCTTGAGTGATTGATTGTTTGTTGAGTTTGATTTCTGCTTATGAATGTTCTTGTGAATCATGGGTCTGGAATTTGTGTTCTGAAATTTGGGTTGTTTGCTGTGATTTTGGATTTTGTTGACTGAGATTCTTGTTCGTATGATCTATCTATGTGGTTAAAATGAAGATCGGAAAGAAAATGTGAACTTTTATAACGGCCGAAGCACACCGCTACCGGAGATTGTTTTATTTGGGCTTTTTCTTTTCGGGATTCTCTTCAACGTTTTTAAGACGTGTCTGGTAAGGAGAGATTTACACACCCTTATGAAGAATGTTTTGTTCCCCTCTCCAACCGATGTGCACCCCTCCTGGGGTCAAGCGTCTTCGTTCTCCTCTCCCATTGATGTGGAACCCCCAACTCCACTCCTTTTTGGGGCCTAGTGTTCTCGTTGGCACACCGTTTAGTGACCATCCTCCTTTGAAGTTCAGCCTCCTCGCGCTCGGTGTCTGACTCTAATACCATTGTAAGATTCCATATTGATTGGAGAGGGGAACAAGTCATTCTTTATAAGGATGTAGAAACCTCTCCCTAACCGATGCGTTTTAAAAATCTCAAGGACATTAGGTCCCTTTACGCTACAACTACAATGATTGTGATTGGAAAGTTGTTGGATGATAGCAACATTAGCATGAATTTCTTGTCACTAAATGATTATAATCTTCGATGTCTTCTAGATATTGTTGTGTCTTGTCTGATAATCATGCTTTTGTTTTTTCTTTCCAGAGCTGACATTAATCTCTTTGTCTGTCTCTTGCAGATGGAAATGATAGCTTTCCAAGCATGTTCATCTTTGTTTCCACAATGTTAACAAAATGTTTCTTTCCATAACATTATCCTTCTACTATATCAAATTTCATTATCAAATGAAAATTTATGTATTGTCTACGGCTGCATGGCCGTTAAATGTCAAACCTCTTGCATTGTATCACTTTATTGCCTTCTTTTAACGTTTTCATGATGTATAGTTTCCTTTTTGTATTTTTTTAGTGTACTACGTTTAAACAAAATCATGTCTACGCCTCGTAGACCTAAAATGCCTCTGAATGTACCATTAAGTCTTTCCTAACAACTCCTTTAGAGCTCTCGAACAAACTACATTATTCAGACTTTCCTTATCTAAAGCCTTGAACCATCAAGTAAAGTACACTAAGTTTTTCTTTAAATAGTCATATCTATCCGCTTAATACTATCTAGATGATTCCTTTGAAACACGTTGCCAGTCTAATAAAATTTTACCATGACTACACTTTCCGGACTTCTTTATTCGACACCATAATATTTGTCAGTACAAGTTAATCAAACCAACCTTCATCCTTAAGTATTCCAATCCAGGAGAAGATGCACAAATCAAAATGGAGGGCAGAAAGGGCAAAAGCAGATAAAACCCAAATAAGGGACACTATGGAGCTTTGGATTGATGCAAAAGCATGATGATATATACATATACTTCCTACATTCTTTACAAGTATTCTTCACCTACATGATATGTTCGTCACTTTCTTTCTTTTTTCTTCTTTTATTTCCTTCTTTCCCCTATTTACAAGCCAATTTGTATGGTTCGTATACTATACTATCTTGCTATTCCAATCAAGAATATTCATGTTCATTCATTTACCTTACGACCCAGCGCCATTGGCTTCACTGCAGCCAAAACGACAGCAACTTTACACGCAAGAAATCCCAGCATTCCTATCACCACTTCTTTAGGTGACAGCATCATGGTTGAATCTCCCAAGTTGAACTTAACTGTAAGAATGGAAAGTCCAACTGCCAGTGCCAAGACCGATAAAGGGCCTCTATATCTTCGATCTTCATTCACAGTTGTTTCAGAATTTGAAGTCGGGGCAGGTAACTCGTCCACAGATCTTTGCAAGAGCAACAGATACAAGAAACCAAGAATGCCACCAGCTAAGAATGCAAGGCCGGCATTTTCACCAGCTGAGAAGGATGAAACAGATGTGCCAGCAAGAATCAACAAGGCATCATAAGTAAGCAAAGAGAGCTTCAAGTCTGCATATTCTTTCATGCTTTCCTCATTGGAAATACTGTCAATAGTGGCTAAATTTGAAAGGTTGGAGCTTCCATTCAGGAAGAACAAGGGCTCAATTCCACATACTTCTGATACCAGGCAAGGCCTAAGTTCTACCATTGATTTGTCGCCGCCCTCCCCGAGCAATATATCCTCGGCTGGGAATTCATACTTGAGACACATGTATTGAAGCTCATGCCCTTCAGATTTCGACTGAGATATGACATACAAGCTTAGACTTCCAAGTCTCCACTGGCCT

mRNA sequence

CGATCCCTTCCCCACACCTCAAACCCTCCATCATCAATGGCTTCCTTCTCAAGAAACCTCTCCCCATTTTCACTATTCCTTCTAATTCTCGCCATTTCCACCCAAACCCATCTCTCCTTTTCATCAATAGACAAACCCCTCAACCCAACAGACATCCACGAACTTCTACTCCGTTACGGTTTTCCCGCTGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGCGCCTTCGAAATCGAACTCGAAACCGATTGCTATGTGATGCTCAGTGAGCTGGTTTACTACGAAAAGAAAATCACGGGGAAATTGAGCTATGGGTCTGTGACCGATGTTTCTGGGATTCAAGTTAAGAAGCTGTTCTTGTGGGTCTCTGTTTCTGGGTTCAAGTCTAATCAAGGATCTGGAACCATCGTGTTCTTTGTCGGACCCTTGTCTGAAACTTTTCCGGCAGAAATGTTCCGGACGATTCCTGGTTGTAGAAGGAAGGCTTGCCTAGGAGGAAGAACAGAAGCCATATGAATGGAAATGATAGCTTTCCAAGCATGTTCATCTTTGTTTCCACAATGTTAACAAAATGTTTCTTTCCATAACATTATCCTTCTACTATATCAAATTTCATTATCAAATGAAAATTTATGTATTGTCTACGGCTGCATGGCCGTTAAATGTCAAACCTCTTGCATTGTATCACTTTATTGCCTTCTTTTAACGTTTTCATGATGTATAGTTTCCTTTTTGTATTTTTTTAGTGTACTACGTTTAAACAAAATCATGTCTACGCCTCGTAGACCTAAAATGCCTCTGAATGTACCATTAAGTCTTTCCTAACAACTCCTTTAGAGCTCTCGAACAAACTACATTATTCAGACTTTCCTTATCTAAAGCCTTGAACCATCAAGTAAAGTACACTAAGTTTTTCTTTAAATAGTCATATCTATCCGCTTAATACTATCTAGATGATTCCTTTGAAACACGTTGCCAGTCTAATAAAATTTTACCATGACTACACTTTCCGGACTTCTTTATTCGACACCATAATATTTGTCAGTACAAGTTAATCAAACCAACCTTCATCCTTAAGTATTCCAATCCAGGAGAAGATGCACAAATCAAAATGGAGGGCAGAAAGGGCAAAAGCAGATAAAACCCAAATAAGGGACACTATGGAGCTTTGGATTGATGCAAAAGCATGATGATATATACATATACTTCCTACATTCTTTACAAGTATTCTTCACCTACATGATATCCAAAACGACAGCAACTTTACACGCAAGAAATCCCAGCATTCCTATCACCACTTCTTTAGGTGACAGCATCATGGTTGAATCTCCCAAGTTGAACTTAACTGTAAGAATGGAAAGTCCAACTGCCAGTGCCAAGACCGATAAAGGGCCTCTATATCTTCGATCTTCATTCACAGTTGTTTCAGAATTTGAAGTCGGGGCAGGTAACTCGTCCACAGATCTTTGCAAGAGCAACAGATACAAGAAACCAAGAATGCCACCAGCTAAGAATGCAAGGCCGGCATTTTCACCAGCTGAGAAGGATGAAACAGATGTGCCAGCAAGAATCAACAAGGCATCATAAGTAAGCAAAGAGAGCTTCAAGTCTGCATATTCTTTCATGCTTTCCTCATTGGAAATACTGTCAATAGTGGCTAAATTTGAAAGGTTGGAGCTTCCATTCAGGAAGAACAAGGGCTCAATTCCACATACTTCTGATACCAGGCAAGGCCTAAGTTCTACCATTGATTTGTCGCCGCCCTCCCCGAGCAATATATCCTCGGCTGGGAATTCATACTTGAGACACATGTATTGAAGCTCATGCCCTTCAGATTTCGACTGAGATATGACATACAAGCTTAGACTTCCAAGTCTCCACTGGCCT

Coding sequence (CDS)

ATGGCTTCCTTCTCAAGAAACCTCTCCCCATTTTCACTATTCCTTCTAATTCTCGCCATTTCCACCCAAACCCATCTCTCCTTTTCATCAATAGACAAACCCCTCAACCCAACAGACATCCACGAACTTCTACTCCGTTACGGTTTTCCCGCTGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGCGCCTTCGAAATCGAACTCGAAACCGATTGCTATGTGATGCTCAGTGAGCTGGTTTACTACGAAAAGAAAATCACGGGGAAATTGAGCTATGGGTCTGTGACCGATGTTTCTGGGATTCAAGTTAAGAAGCTGTTCTTGTGGGTCTCTGTTTCTGGGTTCAAGTCTAATCAAGGATCTGGAACCATCGTGTTCTTTGTCGGACCCTTGTCTGAAACTTTTCCGGCAGAAATGTTCCGGACGATTCCTGGTTGTAGAAGGAAGGCTTGCCTAGGAGGAAGAACAGAAGCCATATGA

Protein sequence

MASFSRNLSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKSYTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGFKSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI

Homology

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BLAST of Cp4.1LG18g02150 vs. TrEMBL
Match: A0A0A0M0C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G630320 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-51
Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 1   MASFSRNLSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKS 60
           MASFS  LSPFSLFLLIL  STQTHLSFS+ D PL  +DIH+LL  YGFP GLLP+NV S
Sbjct: 1   MASFSTILSPFSLFLLILLFSTQTHLSFSARDFPLRSSDIHDLLPLYGFPVGLLPDNVNS 60

Query: 61  YTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGF 120
           YTLSDDG FEI+L++ CYV  S+LVYY K I GKLS  S++DVSGI+VKKLF W+ ++G 
Sbjct: 61  YTLSDDGTFEIQLQSSCYVHFSDLVYYGKNIKGKLSNRSLSDVSGIEVKKLFAWLPITGI 120

Query: 121 KSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI 165
           K    S +I F VG LSE  P  MF +IP CRRKACL G+TEA+
Sbjct: 121 KVTPDSKSIEFAVGFLSEILPVSMFESIPTCRRKACLEGKTEAM 164

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BLAST of Cp4.1LG18g02150 vs. TrEMBL
Match: M5W1G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012400mg PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-41
Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = 1


Query: 7   NLSPFSLFLLILAISTQTHLSFSSIDKPLNP----------TDIHELLLRYGFPAGLLPN 66
           +++  S +LLIL   ++TH   S  D   +P          TD+H+LL +YG P GLLP+
Sbjct: 4   SIAQISFYLLILTFFSETHFGLSLRDLKSDPNRPSTTAQSITDVHDLLPKYGLPKGLLPD 63

Query: 67  NVKSYTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVS 126
           NV SYTLS+DG+FEI LE+ CYV   +LVYY K I GKLSYGSV+DVSGIQ KKLF+WVS
Sbjct: 64  NVNSYTLSEDGSFEIYLESPCYVHFDQLVYYNKNIKGKLSYGSVSDVSGIQAKKLFIWVS 123

Query: 127 VSGFKSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI 165
           V+G + +QGS ++ F+VG LSE  PA+ F  IP C+ KAC G   ++I
Sbjct: 124 VTGIQVDQGSDSVEFYVGALSEKLPAKQFEDIPVCKSKACQGTYVDSI 171

[Close]

BLAST of Cp4.1LG18g02150 vs. TrEMBL
Match: A0A061GS48_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_040161 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-41
Identity = 91/161 (56.52%), Postives = 114/161 (70.81%), Query Frame = 1


Query: 5   SRNLSPFSLFLLILAISTQTHLSFSSI------DKPLN--PTDIHELLLRYGFPAGLLPN 64
           S+  +P SL+LL+LA+  QTHLSFS+        +PL+   +D+H+LL  YG P G+LPN
Sbjct: 61  SKMAAPISLYLLLLALFCQTHLSFSTTGPAIDHSRPLSISTSDVHDLLPTYGLPKGILPN 120

Query: 65  NVKSYTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVS 124
           NVKSYTLS  G F IELE+ CYV   +LVYYEKKI GKLSYG+V DVSGIQ KKLFLW+ 
Sbjct: 121 NVKSYTLSTTGDFTIELESTCYVQFDQLVYYEKKIKGKLSYGAVHDVSGIQAKKLFLWLP 180

Query: 125 VSGFKSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACL 158
           V+G + ++ SG + FFVG LSE  PA+ F  IP C+  A L
Sbjct: 181 VTGIEVDENSGMVQFFVGALSEKLPAKQFEDIPVCKGNAFL 221

[Close]

BLAST of Cp4.1LG18g02150 vs. TrEMBL
Match: A0A061GR70_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040161 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.8e-41
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 9   SPFSLFLLILAISTQTHLSFSSI------DKPLN--PTDIHELLLRYGFPAGLLPNNVKS 68
           +P SL+LL+LA+  QTHLSFS+        +PL+   +D+H+LL  YG P G+LPNNVKS
Sbjct: 3   APISLYLLLLALFCQTHLSFSTTGPAIDHSRPLSISTSDVHDLLPTYGLPKGILPNNVKS 62

Query: 69  YTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGF 128
           YTLS  G F IELE+ CYV   +LVYYEKKI GKLSYG+V DVSGIQ KKLFLW+ V+G 
Sbjct: 63  YTLSTTGDFTIELESTCYVQFDQLVYYEKKIKGKLSYGAVHDVSGIQAKKLFLWLPVTGI 122

Query: 129 KSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACL 158
           + ++ SG + FFVG LSE  PA+ F  IP C+  A L
Sbjct: 123 EVDENSGMVQFFVGALSEKLPAKQFEDIPVCKGNAFL 159

[Close]

BLAST of Cp4.1LG18g02150 vs. TrEMBL
Match: A0A0D2SD80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G341700 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-39
Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 1


Query: 9   SPFSLFLLILAISTQTHLSFSSIDKPLNP--------TDIHELLLRYGFPAGLLPNNVKS 68
           SP   +LL L++ +QT LSFS+   P++          D+H+LL +YG P G++PNNVKS
Sbjct: 46  SPICFYLLFLSLLSQTQLSFSTTHTPIDHGRPLVTSIADVHDLLPKYGLPKGIVPNNVKS 105

Query: 69  YTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGF 128
           YTLS  G F IELE+ CYV   +LVYY+K I+GKLSYG+V DVSGIQ KKLFLW+ V+  
Sbjct: 106 YTLSSTGDFTIELESTCYVQFDDLVYYDKTISGKLSYGAVHDVSGIQAKKLFLWLPVTAI 165

Query: 129 KSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACL 158
           + N  SG + FFVG  S+ FPA  F  IP CRRKA L
Sbjct: 166 EVNGKSGMVQFFVGAFSKEFPAVQFEDIPVCRRKAVL 202

[Close]

BLAST of Cp4.1LG18g02150 vs. TAIR10
Match: AT1G55265.1 (AT1G55265.1 Protein of unknown function, DUF538)

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-36
Identity = 81/157 (51.59%), Postives = 105/157 (66.88%), Query Frame = 1


Query: 13  LFLLILAISTQTHLS------------FSSI--DKP-LNPTDIHELLLRYGFPAGLLPNN 72
           LFL +L++S+  +L             FSS+  D+P L   DIH+LL RYGFP GLLPNN
Sbjct: 12  LFLSLLSLSSSLNLRRPIFSQSNDLDLFSSLNLDRPSLAADDIHDLLPRYGFPKGLLPNN 71

Query: 73  VKSYTLSDDGAFEIELETDCYVMLSE-LVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVS 132
           VKSYT+SDDG F ++L + CYV  S+ LV+Y K I GKLSYGSV DV GIQ K+ FLW+ 
Sbjct: 72  VKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKLSYGSVKDVRGIQAKEAFLWLP 131

Query: 133 VSGFKSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRR 154
           ++  +S+  S T+VF VG +S+T PA MF  +P C R
Sbjct: 132 ITAMESDPSSATVVFSVGFVSKTLPASMFENVPSCSR 168

[Close]

BLAST of Cp4.1LG18g02150 vs. TAIR10
Match: AT5G19860.1 (AT5G19860.1 Protein of unknown function, DUF538)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 61/154 (39.61%), Postives = 92/154 (59.74%), Query Frame = 1


Query: 8   LSPF--SLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKSYTLSD 67
           L PF  S+F+  L + T T  S +  D P + + ++ELL +YG P+GLLP+ V  +TLSD
Sbjct: 3   LYPFFISIFIFSLTLFTTTTHSLNEPD-PDSISTVYELLPKYGLPSGLLPDTVTDFTLSD 62

Query: 68  DGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGFKSN-Q 127
           DG F + L   C +    LV+Y+K I+G++ YGS+T++ GIQVKK F+W+ V   K +  
Sbjct: 63  DGRFVVHLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLP 122

Query: 128 GSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLG 159
            S +I F VG +++    + F+TI  C      G
Sbjct: 123 PSDSIYFKVGFINKKLDIDQFKTIHSCHDNGVSG 155

[Close]

BLAST of Cp4.1LG18g02150 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 94.4 bits (233), Expect = 7.2e-20
Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = 1


Query: 15  LLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKSYTLSDDGAFEIELE 74
           +++L  + +  LS SS   P  PT +H++L   G PAGLLP  V SY L +DG  E+ L 
Sbjct: 8   MILLLTTLRLSLSLSS---PSYPT-VHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLA 67

Query: 75  TDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGF-KSNQGSGTIVFFV 134
             CY      V++E  + G LSYGS+  V G+  K+LFLW+ V      N  SG IVF +
Sbjct: 68  APCYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDI 127

Query: 135 GPLSETFPAEMFRTIPGCR 153
           G   +     +F   P C+
Sbjct: 128 GVAFKQLSLSLFEDPPKCK 142

[Close]

BLAST of Cp4.1LG18g02150 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538)

HSP 1 Score: 84.0 bits (206), Expect = 9.7e-17
Identity = 41/120 (34.17%), Postives = 64/120 (53.33%), Query Frame = 1


Query: 34  PLNPTDIHELLLRYGFPAGLLPNNVKSYTLSDD-GAFEIELETDCYVMLSELVYYEKKIT 93
           P + + I  LL   G P GL P+NV+SY+L D  G  E++L+  C+      VY+++ I 
Sbjct: 16  PSSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENRVYFDRVIK 75

Query: 94  GKLSYGSVTDVSGIQVKKLFLWVSVSGFKSNQ-GSGTIVFFVGPLSETFPAEMFRTIPGC 152
             LSYG +  + G+  ++LFLW+ V G   N   SG ++F +G   +     +F   P C
Sbjct: 76  ANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVC 135

[Close]

BLAST of Cp4.1LG18g02150 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 1


Query: 40  IHELLLRYGFPAGLLPNNVKSYTLSDD-GAFEIELETDCYVMLSELVYYEKKITGKLSYG 99
           I E+LL  G P GL P  VK +T++ + G F + L   C       ++Y++ ++G + Y 
Sbjct: 30  IDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGTIGYA 89

Query: 100 SVTDVSGIQVKKLFLWVSVSGFKSNQGSGTIVFF-VGPLSETFPAEMFRTIPGC 152
            + D+SGI  ++LFLW+ V G + +  S  ++FF VG L + +   +F T   C
Sbjct: 90  QIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of Cp4.1LG18g02150 vs. NCBI nr
Match: gi|659098800|ref|XP_008450299.1| (PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 4.6e-53
Identity = 109/164 (66.46%), Postives = 129/164 (78.66%), Query Frame = 1


Query: 1   MASFSRNLSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKS 60
           MASFSR LSPFSLFLLIL ISTQTHLSFS+ D  L  +DIH+LL  YGFP GLLP+NVKS
Sbjct: 1   MASFSRILSPFSLFLLILVISTQTHLSFSARDLLLKSSDIHDLLPLYGFPVGLLPSNVKS 60

Query: 61  YTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGF 120
           YTLSDDG+F IEL++ CYV  ++LVYY K I GKLSYGS++DVSGIQVKKLF W+ ++G 
Sbjct: 61  YTLSDDGSFVIELDSACYVQFADLVYYGKTIKGKLSYGSLSDVSGIQVKKLFAWLPITGM 120

Query: 121 KSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI 165
           +    S +I F VG LSE  P  MF +IP CR+KACL G+TEA+
Sbjct: 121 RVTSDSKSIEFQVGFLSEALPFSMFESIPTCRKKACLEGKTEAV 164

[Close]

BLAST of Cp4.1LG18g02150 vs. NCBI nr
Match: gi|449442610|ref|XP_004139074.1| (PREDICTED: uncharacterized protein LOC101202755 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 1   MASFSRNLSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKS 60
           MASFS  LSPFSLFLLIL  STQTHLSFS+ D PL  +DIH+LL  YGFP GLLP+NV S
Sbjct: 1   MASFSTILSPFSLFLLILLFSTQTHLSFSARDFPLRSSDIHDLLPLYGFPVGLLPDNVNS 60

Query: 61  YTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGF 120
           YTLSDDG FEI+L++ CYV  S+LVYY K I GKLS  S++DVSGI+VKKLF W+ ++G 
Sbjct: 61  YTLSDDGTFEIQLQSSCYVHFSDLVYYGKNIKGKLSNRSLSDVSGIEVKKLFAWLPITGI 120

Query: 121 KSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI 165
           K    S +I F VG LSE  P  MF +IP CRRKACL G+TEA+
Sbjct: 121 KVTPDSKSIEFAVGFLSEILPVSMFESIPTCRRKACLEGKTEAM 164

[Close]

BLAST of Cp4.1LG18g02150 vs. NCBI nr
Match: gi|1009123863|ref|XP_015878766.1| (PREDICTED: uncharacterized protein LOC107415025 [Ziziphus jujuba])

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-43
Identity = 89/154 (57.79%), Postives = 116/154 (75.32%), Query Frame = 1


Query: 12  SLFLLILAISTQTHLSFSSIDKPLN----PTDIHELLLRYGFPAGLLPNNVKSYTLSDDG 71
           S+ LL++ + +QT+LS S+   PL+     TDIHELL +YGFP G+LPNN+KSYTLS+DG
Sbjct: 11  SVCLLLVTLFSQTNLSLSTTTSPLHIEESVTDIHELLPKYGFPKGILPNNIKSYTLSEDG 70

Query: 72  AFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVSVSGFKSNQGSG 131
            FEI L + CYV   +LVYY+KKITGKL+YGSV++VSGIQ KKLFLW+SV+G K+++ SG
Sbjct: 71  YFEIYLLSPCYVQFDQLVYYDKKITGKLTYGSVSNVSGIQTKKLFLWLSVTGIKADKDSG 130

Query: 132 TIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRT 162
            I F+VG LSE  PA  F  +P C+ KAC G  +
Sbjct: 131 MIEFYVGSLSERLPANQFEQVPTCKAKACHGSES 164

[Close]

BLAST of Cp4.1LG18g02150 vs. NCBI nr
Match: gi|657951224|ref|XP_008351693.1| (PREDICTED: uncharacterized protein LOC103415116 [Malus domestica])

HSP 1 Score: 178.7 bits (452), Expect = 8.2e-42
Identity = 92/174 (52.87%), Postives = 120/174 (68.97%), Query Frame = 1


Query: 1   MASFSRNLSPFSLFLLILAISTQTHLSFSSIDKPLNPT----------DIHELLLRYGFP 60
           MAS S  +S   L+LL+L + ++THL+ S  D   NP           D+H+LL +YG P
Sbjct: 1   MASASAQIS---LYLLLLTLFSKTHLTLSLRDLKPNPNGSSNTSQSIADVHDLLPQYGLP 60

Query: 61  AGLLPNNVKSYTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKK 120
            GLLPNNVKSYTL++DG+FEI LE+ CYV   +LVYY K I GKLSYG V+DVSGIQ KK
Sbjct: 61  KGLLPNNVKSYTLTEDGSFEIFLESPCYVHFDQLVYYNKHIKGKLSYGEVSDVSGIQAKK 120

Query: 121 LFLWVSVSGFKSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI 165
           LF+WVSV+G   ++GS ++ F+VG LSE  PA+ F  IP C+ KAC G R+ ++
Sbjct: 121 LFIWVSVTGIHRDKGSDSVEFYVGALSEKLPAKQFEDIPDCKNKACHGIRSGSV 171

[Close]

BLAST of Cp4.1LG18g02150 vs. NCBI nr
Match: gi|595830172|ref|XP_007206017.1| (hypothetical protein PRUPE_ppa012400mg [Prunus persica])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = 1


Query: 7   NLSPFSLFLLILAISTQTHLSFSSIDKPLNP----------TDIHELLLRYGFPAGLLPN 66
           +++  S +LLIL   ++TH   S  D   +P          TD+H+LL +YG P GLLP+
Sbjct: 4   SIAQISFYLLILTFFSETHFGLSLRDLKSDPNRPSTTAQSITDVHDLLPKYGLPKGLLPD 63

Query: 67  NVKSYTLSDDGAFEIELETDCYVMLSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWVS 126
           NV SYTLS+DG+FEI LE+ CYV   +LVYY K I GKLSYGSV+DVSGIQ KKLF+WVS
Sbjct: 64  NVNSYTLSEDGSFEIYLESPCYVHFDQLVYYNKNIKGKLSYGSVSDVSGIQAKKLFIWVS 123

Query: 127 VSGFKSNQGSGTIVFFVGPLSETFPAEMFRTIPGCRRKACLGGRTEAI 165
           V+G + +QGS ++ F+VG LSE  PA+ F  IP C+ KAC G   ++I
Sbjct: 124 VTGIQVDQGSDSVEFYVGALSEKLPAKQFEDIPVCKSKACQGTYVDSI 171

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g02150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g02150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0C4_CUCSA	1.8e-51	65.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G630320 PE=4 SV=1	[more]
M5W1G2_PRUPE	1.3e-41	52.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012400mg PE=4 SV=1	[more]
A0A061GS48_THECC	2.2e-41	56.52	Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_040161 PE...	[more]
A0A061GR70_THECC	4.8e-41	57.32	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040161 PE=4 SV=1	[more]
A0A0D2SD80_GOSRA	3.5e-39	54.14	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G341700 PE=4 SV=1	[more]

BLAST of Cp4.1LG18g02150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55265.1	1.4e-36	51.59	Protein of unknown function, DUF538	[more]
AT5G19860.1	2.5e-25	39.61	Protein of unknown function, DUF538	[more]
AT5G54530.1	7.2e-20	38.13	Protein of unknown function, DUF538	[more]
AT1G61667.1	9.7e-17	34.17	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.4e-15	33.33	Protein of unknown function, DUF538	[more]

BLAST of Cp4.1LG18g02150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098800\|ref\|XP_008450299.1\|	4.6e-53	66.46	PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo]	[more]
gi\|449442610\|ref\|XP_004139074.1\|	2.5e-51	65.24	PREDICTED: uncharacterized protein LOC101202755 [Cucumis sativus]	[more]
gi\|1009123863\|ref\|XP_015878766.1\|	3.3e-43	57.79	PREDICTED: uncharacterized protein LOC107415025 [Ziziphus jujuba]	[more]
gi\|657951224\|ref\|XP_008351693.1\|	8.2e-42	52.87	PREDICTED: uncharacterized protein LOC103415116 [Malus domestica]	[more]
gi\|595830172\|ref\|XP_007206017.1\|	1.8e-41	52.38	hypothetical protein PRUPE_ppa012400mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009735	response to cytokinin
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g02150.1	Cp4.1LG18g02150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 34..154 score: 1.9
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 41..145 score: 2.0
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 13..154 score: 6.8
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 7..164 score: 5.4
None	No IPR available	PANTHER	PTHR31676:SF6	SUBFAMILY NOT NAMED	coord: 7..164 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g02150	Cucsa.355820	Cucumber (Gy14) v1	cgycpeB0928
Cp4.1LG18g02150	CmaCh10G008690	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g02150	CmoCh10G009090	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g02150	Csa1G630320	Cucumber (Chinese Long) v2	cpecuB349
Cp4.1LG18g02150	MELO3C015079	Melon (DHL92) v3.5.1	cpemeB329
Cp4.1LG18g02150	ClCG03G012060	Watermelon (Charleston Gray)	cpewcgB324
Cp4.1LG18g02150	CSPI01G31330	Wild cucumber (PI 183967)	cpecpiB350
Cp4.1LG18g02150	Lsi06G006350	Bottle gourd (USVL1VR-Ls)	cpelsiB309
Cp4.1LG18g02150	MELO3C015079.2	Melon (DHL92) v3.6.1	cpemedB387
Cp4.1LG18g02150	CsaV3_1G043700	Cucumber (Chinese Long) v3	cpecucB0428
Cp4.1LG18g02150	Bhi02G001203	Wax gourd	cpewgoB0468
Cp4.1LG18g02150	CsGy1G030500	Cucumber (Gy14) v2	cgybcpeB039
Cp4.1LG18g02150	Carg17837	Silver-seed gourd	carcpeB1341
Cp4.1LG18g02150	Carg22684	Silver-seed gourd	carcpeB0757

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG18g02150	Cp4.1LG04g12570	Cucurbita pepo (Zucchini)	cpecpeB363

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g02150	Cucurbita pepo (Zucchini)	cpecpeB369
Cp4.1LG18g02150	Cucurbita maxima (Rimu)	cmacpeB126
Cp4.1LG18g02150	Cucurbita maxima (Rimu)	cmacpeB632
Cp4.1LG18g02150	Cucurbita moschata (Rifu)	cmocpeB104
Cp4.1LG18g02150	Cucurbita moschata (Rifu)	cmocpeB581
Cp4.1LG18g02150	Bottle gourd (USVL1VR-Ls)	cpelsiB299
Cp4.1LG18g02150	Watermelon (Charleston Gray)	cpewcgB327
Cp4.1LG18g02150	Watermelon (97103) v1	cpewmB356