Carg22684 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22684
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function, DUF538
Location	Cucurbita_argyrosperma_scaffold_230 : 33429 .. 33911 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCTCTCCCCATTCTCACTTCTCCTTCTAATTCTCACCATTACCGCCCAAACCCATCTCGCCTCTTCCGCAAGGGACATCGCCCTCAACTCAACGGACATCCACGAGCTTTTGCCCCTTTACGGTTTTCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACGCTCTCTGCCGATGGTAGCTTCGAAATCGAACTCGAAAGCGAGTGTTATGTGAAGTTCGATCTGTTGGTGTATTACGATAAGATAGTGAAAGGGAAATTGAGGTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCAAAGAAGCTGTTCTTGTGGGTCTCTGTTACAGGAATCAAGGCTAATCAGGGCTCTGGAACCATTGATTTTTATGTTGGGGTTTTGTCGGAGACTTTGCCGGCTCAACAGTTCCAGAAGATTCCTGCATGTACACGGGAGGGTTGCGTAGGAGAAAGAACAGAGGCTATGTGA

mRNA sequence

ATGGCTTCCCTCTCCCCATTCTCACTTCTCCTTCTAATTCTCACCATTACCGCCCAAACCCATCTCGCCTCTTCCGCAAGGGACATCGCCCTCAACTCAACGGACATCCACGAGCTTTTGCCCCTTTACGGTTTTCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACGCTCTCTGCCGATGGTAGCTTCGAAATCGAACTCGAAAGCGAGTGTTATGTGAAGTTCGATCTGTTGGTGTATTACGATAAGATAGTGAAAGGGAAATTGAGGTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCAAAGAAGCTGTTCTTGTGGGTCTCTGTTACAGGAATCAAGGCTAATCAGGGCTCTGGAACCATTGATTTTTATGTTGGGGTTTTGTCGGAGACTTTGCCGGCTCAACAGTTCCAGAAGATTCCTGCATGTACACGGGAGGGTTGCGTAGGAGAAAGAACAGAGGCTATGTGA

Coding sequence (CDS)

ATGGCTTCCCTCTCCCCATTCTCACTTCTCCTTCTAATTCTCACCATTACCGCCCAAACCCATCTCGCCTCTTCCGCAAGGGACATCGCCCTCAACTCAACGGACATCCACGAGCTTTTGCCCCTTTACGGTTTTCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACGCTCTCTGCCGATGGTAGCTTCGAAATCGAACTCGAAAGCGAGTGTTATGTGAAGTTCGATCTGTTGGTGTATTACGATAAGATAGTGAAAGGGAAATTGAGGTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCAAAGAAGCTGTTCTTGTGGGTCTCTGTTACAGGAATCAAGGCTAATCAGGGCTCTGGAACCATTGATTTTTATGTTGGGGTTTTGTCGGAGACTTTGCCGGCTCAACAGTTCCAGAAGATTCCTGCATGTACACGGGAGGGTTGCGTAGGAGAAAGAACAGAGGCTATGTGA

Protein sequence

MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM

Homology

[Close]

BLAST of Carg22684 vs. NCBI nr
Match: XP_022933750.1 (uncharacterized protein LOC111441073 [Cucurbita moschata])

HSP 1 Score: 311.6 bits (797), Expect = 1.5e-81
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTI AQTHLASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTIIAQTHLASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 160

[Close]

BLAST of Carg22684 vs. NCBI nr
Match: XP_023531629.1 (uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 7.1e-79
Identity = 153/160 (95.62%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLS FSLLLLILTITAQTHLASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSRFSLLLLILTITAQTHLASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
           ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGI+AKKLFLWVSVTGI+ANQ
Sbjct: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIEAKKLFLWVSVTGIEANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTR+ C+GERTEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTRKACLGERTEAM 160

[Close]

BLAST of Carg22684 vs. NCBI nr
Match: XP_023006181.1 (uncharacterized protein LOC111498989 [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 5.1e-77
Identity = 150/160 (93.75%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60
           MASLSPFSLLLLILTITAQTH+ASS RDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS
Sbjct: 1   MASLSPFSLLLLILTITAQTHVASSVRDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLS 60

Query: 61  ADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ 120
            DGSFEIELESECYVKFDLLVYY+KIVKGKL YGSVADVSGIQAKKLFLWVSVTGI+ANQ
Sbjct: 61  DDGSFEIELESECYVKFDLLVYYEKIVKGKLSYGSVADVSGIQAKKLFLWVSVTGIEANQ 120

Query: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           GSGTIDFYVGVLSETLPAQQFQKIPACTR+ C GE TEAM
Sbjct: 121 GSGTIDFYVGVLSETLPAQQFQKIPACTRKACFGEGTEAM 160

[Close]

BLAST of Carg22684 vs. NCBI nr
Match: XP_022153277.1 (uncharacterized protein LOC111020803 [Momordica charantia])

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56
Identity = 122/172 (70.93%), Postives = 130/172 (75.58%), Query Frame = 0


Query: 1   MASLSP--FSLLLLILTITAQTHLASSARDIALNS----------TDIHELLPLYGFPKG 60
           MAS S   FS  LLIL I  QTHL+ S  D  + S           D+HELLP YGFPKG
Sbjct: 1   MASFSRTIFSPFLLILAICTQTHLSISLTDPKIESNRPSFPLKSTADVHELLPQYGFPKG 60

Query: 61  LLPNNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLF 120
           LLP+NVKSYTLS DGSFEIELESECYVKF LLVYYDK +KGKL YGSV D SGIQAKKLF
Sbjct: 61  LLPSNVKSYTLSDDGSFEIELESECYVKFSLLVYYDKKIKGKLSYGSVVDASGIQAKKLF 120

Query: 121 LWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           LWVSVTGIKAN   GTIDF+VG LSETL AQQFQKIP C R  C+GERTEA+
Sbjct: 121 LWVSVTGIKANPAEGTIDFFVGFLSETLSAQQFQKIPGCKRNDCLGERTEAI 172

[Close]

BLAST of Carg22684 vs. NCBI nr
Match: XP_022960628.1 (uncharacterized protein LOC111461358 [Cucurbita moschata])

HSP 1 Score: 223.8 bits (569), Expect = 4.2e-55
Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 4   LSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADG 63
           LSPFSL LLIL I+ QTHL+ S+ D  LN TDIHELL  YGFP GLLPNNVKSYTLS DG
Sbjct: 8   LSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKSYTLSDDG 67

Query: 64  SFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSG 123
           +FEIEL+++CYV F  LVYY+K + GKL YGSV DVSGIQ KKLFLW+SV+G K+NQGSG
Sbjct: 68  AFEIELKADCYVMFSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWLSVSGFKSNQGSG 127

Query: 124 TIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           TI F+VG LSET PA+ F+ IP C R+GC+G RTEAM
Sbjct: 128 TIVFFVGSLSETFPAEMFRTIPGCRRKGCLGGRTEAM 164

[Close]

BLAST of Carg22684 vs. TAIR10
Match: AT1G55265.1 (Protein of unknown function, DUF538)

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-36
Identity = 69/115 (60.00%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 36  IHELLPLYGFPKGLLPNNVKSYTLSADGSFEIELESECYVKF-DLLVYYDKIVKGKLRYG 95
           IH+LLP YGFPKGLLPNNVKSYT+S DG F ++L S CYVKF D LV+Y K + GKL YG
Sbjct: 54  IHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKLSYG 113

Query: 96  SVADVSGIQAKKLFLWVSVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTR 150
           SV DV GIQAK+ FLW+ +T ++++  S T+ F VG +S+TLPA  F+ +P+C+R
Sbjct: 114 SVKDVRGIQAKEAFLWLPITAMESDPSSATVVFSVGFVSKTLPASMFENVPSCSR 168

[Close]

BLAST of Carg22684 vs. TAIR10
Match: AT5G19860.1 (Protein of unknown function, DUF538)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26
Identity = 61/154 (39.61%), Postives = 93/154 (60.39%), Query Frame = 0


Query: 3   SLSPFSLLLLILTITAQTHLASSARDIALNS-TDIHELLPLYGFPKGLLPNNVKSYTLSA 62
           +L PF + + I ++T  T    S  +   +S + ++ELLP YG P GLLP+ V  +TLS 
Sbjct: 2   ALYPFFISIFIFSLTLFTTTTHSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLSD 61

Query: 63  DGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKAN-Q 122
           DG F + L + C ++FD LV+YDK + G++ YGS+ ++ GIQ KK F+W+ V  IK +  
Sbjct: 62  DGRFVVHLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLP 121

Query: 123 GSGTIDFYVGVLSETLPAQQFQKIPACTREGCVG 155
            S +I F VG +++ L   QF+ I +C   G  G
Sbjct: 122 PSDSIYFKVGFINKKLDIDQFKTIHSCHDNGVSG 155

[Close]

BLAST of Carg22684 vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 9   LLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADGSFEIE 68
           ++LL+ T+     L+S       +   +H++L   G P GLLP  V SY L  DG  E+ 
Sbjct: 8   MILLLTTLRLSLSLSSP------SYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVF 67

Query: 69  LESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKA-NQGSGTIDF 128
           L + CY KF+  V+++ +V+G L YGS+  V G+  K+LFLW+ V  I   N  SG I F
Sbjct: 68  LAAPCYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVF 127

Query: 129 YVGVLSETLPAQQFQKIPACTREGCVGER 157
            +GV  + L    F+  P C  +G + ++
Sbjct: 128 DIGVAFKQLSLSLFEDPPKCKPDGVLKKK 150

[Close]

BLAST of Carg22684 vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538)

HSP 1 Score: 94.0 bits (232), Expect = 9.1e-20
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 9   LLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTL-SADGSFEI 68
           LLLL+L +   T  + S+         I  LL   G P GL P+NV+SY+L    G  E+
Sbjct: 4   LLLLLLLVPFITPSSQSS---------IRNLLEARGLPGGLFPDNVESYSLDDKTGELEV 63

Query: 69  ELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQ-GSGTID 128
           +L++ C+ +F+  VY+D+++K  L YG +  + G+  ++LFLW+ V GI  N   SG + 
Sbjct: 64  QLQNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVL 123

Query: 129 FYVGVLSETLPAQQFQKIPACTREGCVGERTE 159
           F +GV  + +    F+  P C   G + E+ E
Sbjct: 124 FDIGVAHKQISRSLFEDPPVCYPPGSIMEKLE 146

[Close]

BLAST of Carg22684 vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 29  IALNSTDIHELLPLYGFPKGLLPNNVKSYTLSAD-GSFEIELESECYVKFDLLVYYDKIV 88
           +   +  I E+L   G P GL P  VK +T++ + G F + L   C  K++  ++YD+IV
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 89  KGKLRYGSVADVSGIQAKKLFLWVSVTGIKAN-QGSGTIDFYVGVLSETLPAQQFQKIPA 148
            G + Y  + D+SGI A++LFLW+ V GI+ +   SG I F VGVL +      F+    
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFE---- 142

Query: 149 CTREGCVGERTEA 160
            T   CV  R +A
Sbjct: 143 -TPRDCVAVRGDA 150

[Close]

BLAST of Carg22684 vs. TrEMBL
Match: tr|A0A1S3BPX6|A0A1S3BPX6_CUCME (uncharacterized protein LOC103491951 OS=Cucumis melo OX=3656 GN=LOC103491951 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.0e-49
Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 4   LSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADG 63
           LSPFSL LLIL I+ QTHL+ SARD+ L S+DIH+LLPLYGFP GLLP+NVKSYTLS DG
Sbjct: 8   LSPFSLFLLILVISTQTHLSFSARDLLLKSSDIHDLLPLYGFPVGLLPSNVKSYTLSDDG 67

Query: 64  SFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSG 123
           SF IEL+S CYV+F  LVYY K +KGKL YGS++DVSGIQ KKLF W+ +TG++    S 
Sbjct: 68  SFVIELDSACYVQFADLVYYGKTIKGKLSYGSLSDVSGIQVKKLFAWLPITGMRVTSDSK 127

Query: 124 TIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           +I+F VG LSE LP   F+ IP C ++ C+  +TEA+
Sbjct: 128 SIEFQVGFLSEALPFSMFESIPTCRKKACLEGKTEAV 164

[Close]

BLAST of Carg22684 vs. TrEMBL
Match: tr|A0A2P5B2E3|A0A2P5B2E3_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_334730 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.6e-48
Identity = 97/169 (57.40%), Postives = 130/169 (76.92%), Query Frame = 0


Query: 2   ASLSPFSLLLLILTITAQTHLASSARDIALNS----------TDIHELLPLYGFPKGLLP 61
           ++++P SL L++LT+ + TH +SS R + LNS          +D+H+LLPLYG P+GLLP
Sbjct: 4   STIAPISLTLILLTLFSLTHFSSSLRVLRLNSDRRFTANLSTSDVHDLLPLYGLPRGLLP 63

Query: 62  NNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWV 121
           NNVKSY+LS DGSF++EL+S CYV+FD LV+YDK + GKL YGSV+DV+GIQAKKLF+WV
Sbjct: 64  NNVKSYSLSEDGSFKVELQSPCYVQFDKLVWYDKKITGKLSYGSVSDVTGIQAKKLFVWV 123

Query: 122 SVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           SVT I A++ S TI FYVG LSE LPA++F+K+P C R GC   + E++
Sbjct: 124 SVTEIHADKDSDTIRFYVGFLSEDLPAKEFEKVPVCKRNGCQEIKPESI 172

[Close]

BLAST of Carg22684 vs. TrEMBL
Match: tr|M5W1G2|M5W1G2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G009400 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 99/169 (58.58%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 2   ASLSPFSLLLLILTITAQTHLASSARDI----------ALNSTDIHELLPLYGFPKGLLP 61
           +S++  S  LLILT  ++TH   S RD+          A + TD+H+LLP YG PKGLLP
Sbjct: 3   SSIAQISFYLLILTFFSETHFGLSLRDLKSDPNRPSTTAQSITDVHDLLPKYGLPKGLLP 62

Query: 62  NNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWV 121
           +NV SYTLS DGSFEI LES CYV FD LVYY+K +KGKL YGSV+DVSGIQAKKLF+WV
Sbjct: 63  DNVNSYTLSEDGSFEIYLESPCYVHFDQLVYYNKNIKGKLSYGSVSDVSGIQAKKLFIWV 122

Query: 122 SVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           SVTGI+ +QGS +++FYVG LSE LPA+QF+ IP C  + C G   +++
Sbjct: 123 SVTGIQVDQGSDSVEFYVGALSEKLPAKQFEDIPVCKSKACQGTYVDSI 171

[Close]

BLAST of Carg22684 vs. TrEMBL
Match: tr|A0A1Q3CM30|A0A1Q3CM30_CEPFO (DUF538 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24774 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 103/165 (62.42%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 1   MASLSPFSLLLLILTITAQTHLASSARDIALNS----------TDIHELLPLYGFPKGLL 60
           MASLS  SL  L LT+  +THL+     +  N           TD+H+LLP YG PKGLL
Sbjct: 1   MASLSSISLTFLFLTLLFKTHLSFPLPKLEFNRNRPFLPLNSLTDVHDLLPQYGLPKGLL 60

Query: 61  PNNVKSYTLSADGSFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLW 120
           PNNVKSY+LS+ G F IELES CYV+FD LVYYDK +KG+L YGSV DVSGIQAKKLFLW
Sbjct: 61  PNNVKSYSLSSSGDFNIELESPCYVQFDQLVYYDKKIKGQLSYGSVHDVSGIQAKKLFLW 120

Query: 121 VSVTGIKANQGSGTIDFYVGVLSETLPAQQFQKIPACTREGCVGE 156
           VSVTGI A + SGTIDFYVG LSE+LPA+QF  IP C  + C  E
Sbjct: 121 VSVTGIVAEKDSGTIDFYVGALSESLPAKQFDDIPVCKSKSCYHE 165

[Close]

BLAST of Carg22684 vs. TrEMBL
Match: tr|A0A0A0M0C4|A0A0A0M0C4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630320 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.2e-47
Identity = 97/157 (61.78%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 4   LSPFSLLLLILTITAQTHLASSARDIALNSTDIHELLPLYGFPKGLLPNNVKSYTLSADG 63
           LSPFSL LLIL  + QTHL+ SARD  L S+DIH+LLPLYGFP GLLP+NV SYTLS DG
Sbjct: 8   LSPFSLFLLILLFSTQTHLSFSARDFPLRSSDIHDLLPLYGFPVGLLPDNVNSYTLSDDG 67

Query: 64  SFEIELESECYVKFDLLVYYDKIVKGKLRYGSVADVSGIQAKKLFLWVSVTGIKANQGSG 123
           +FEI+L+S CYV F  LVYY K +KGKL   S++DVSGI+ KKLF W+ +TGIK    S 
Sbjct: 68  TFEIQLQSSCYVHFSDLVYYGKNIKGKLSNRSLSDVSGIEVKKLFAWLPITGIKVTPDSK 127

Query: 124 TIDFYVGVLSETLPAQQFQKIPACTREGCVGERTEAM 161
           +I+F VG LSE LP   F+ IP C R+ C+  +TEAM
Sbjct: 128 SIEFAVGFLSEILPVSMFESIPTCRRKACLEGKTEAM 164

The following BLAST results are available for this feature:

BLAST of Carg22684 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933750.1	1.5e-81	98.75	uncharacterized protein LOC111441073 [Cucurbita moschata]	[more]
XP_023531629.1	7.1e-79	95.63	uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo]	[more]
XP_023006181.1	5.1e-77	93.75	uncharacterized protein LOC111498989 [Cucurbita maxima]	[more]
XP_022153277.1	1.7e-56	70.93	uncharacterized protein LOC111020803 [Momordica charantia]	[more]
XP_022960628.1	4.2e-55	70.70	uncharacterized protein LOC111461358 [Cucurbita moschata]	[more]

BLAST of Carg22684 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55265.1	1.4e-36	60.00	Protein of unknown function, DUF538	[more]
AT5G19860.1	1.3e-26	39.61	Protein of unknown function, DUF538	[more]
AT5G54530.1	1.4e-20	35.57	Protein of unknown function, DUF538	[more]
AT1G61667.1	9.1e-20	34.21	Protein of unknown function, DUF538	[more]
AT3G07460.2	1.1e-17	36.09	Protein of unknown function, DUF538	[more]

BLAST of Carg22684 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22684 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPX6\|A0A1S3BPX6_CUCME	3.0e-49	63.06	uncharacterized protein LOC103491951 OS=Cucumis melo OX=3656 GN=LOC103491951 PE=...	[more]
tr\|A0A2P5B2E3\|A0A2P5B2E3_9ROSA	9.6e-48	57.40	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_334730 PE=4 S...	[more]
tr\|M5W1G2\|M5W1G2_PRUPE	1.3e-47	58.58	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G009400 PE=4 SV=1	[more]
tr\|A0A1Q3CM30\|A0A1Q3CM30_CEPFO	1.3e-47	62.42	DUF538 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2...	[more]
tr\|A0A0A0M0C4\|A0A0A0M0C4_CUCSA	6.2e-47	61.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630320 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538
IPR036758	At5g01610-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22684-RA	Carg22684-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 25..146 e-value: 1.1E-28 score: 101.7
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 9..151
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 37..142 e-value: 1.1E-30 score: 106.3
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 2..150
None	No IPR available	PANTHER	PTHR31676:SF6	SUBFAMILY NOT NAMED	coord: 2..150

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22684	Csa1G630320	Cucumber (Chinese Long) v2	carcuB0565
Carg22684	MELO3C015079	Melon (DHL92) v3.5.1	carmeB0541
Carg22684	ClCG03G012060	Watermelon (Charleston Gray)	carwcgB0520
Carg22684	CSPI01G31330	Wild cucumber (PI 183967)	carcpiB0571
Carg22684	Cucsa.355820	Cucumber (Gy14) v1	carcgyB0613
Carg22684	CmaCh10G008690	Cucurbita maxima (Rimu)	carcmaB0748
Carg22684	CmoCh10G009090	Cucurbita moschata (Rifu)	carcmoB0726
Carg22684	Lsi06G006350	Bottle gourd (USVL1VR-Ls)	carlsiB486
Carg22684	Cp4.1LG04g12570	Cucurbita pepo (Zucchini)	carcpeB0758
Carg22684	Cp4.1LG18g02150	Cucurbita pepo (Zucchini)	carcpeB0757
Carg22684	CsGy1G030500	Cucumber (Gy14) v2	carcgybB0542
Carg22684	MELO3C015079.2	Melon (DHL92) v3.6.1	carmedB0546
Carg22684	CsaV3_1G043700	Cucumber (Chinese Long) v3	carcucB0573
Carg22684	Cla97C03G062220	Watermelon (97103) v2	carwmbB0561
Carg22684	Bhi02G001203	Wax gourd	carwgoB0645

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22684	Carg17837	Silver-seed gourd	carcarB502

The following block(s) are covering this gene:

None