Cp4.1LG18g00690 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g00690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Nuclear transcription factor Y subunit C-9
Location	Cp4.1LG18 : 1728604 .. 1739773 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTAGAGATGTCGAGGGGGCTTTAAATTTATAATAAAAAAAACATCCGACCACAAATAATGGAGTGGAGATATGCTGGGAGATCAGCCACAACATAGACACGTCCAAACACACTCCAAAAAAATGTCACATAACCAACCATCTATAAAAAAGAATGGCACATCACCAACTCTATGTAAAAAAAAATGCCACTTATCTAGCCACAAATAATGGAGGTTAGAGATGTCATTATAATTTATAAAAGAAAACATCCGCCACAAATAATGGATTGCACACATCCAGCCACACACCACAACACAAATCCTTGTTTTATTAAAGCACAAATTCTCAAAAAATGCTTACAAGTTCATTGAGAGACTGAGAAAACGAGGAGAGATCGAGATCAAGACTGAGAGATGGAGAGGAGAGGGGAGTTGAGACCACAACATTGCAACGTCGCGGAGAGGAGAGTCGAGACTGAAGTCTGAGAGTGATAGACTGAGAGACTATGAGAGGCTGAGAGGGAGAGACTGAGAGAGTGAAACTGTGAAAGTGAGAGACGGAGAAAGAGACAAAGAAGGTTAGAGAGGCTGAGTCTGAGAGACAAAGTCTCGAACTCAAGGTCAAGTGGCGGATGCCAGACGCTGTCAAAGAGAGATAGTACCGCGAACACTAGACGTGTACAGCGGTGGATGCCAGACATGTATAGTGTCGCAAGACACAACGAGAGATAGTTTGACGTTGGCAGGACATGGGCTTTAGGTTTGGGCTTCCGCCCGTTCAATAGTTTGGTTGGGGCCGTTGGACTTTTTTTTTTTTTTTTAATGTTTTTGGGTTGGGTCGGGTTGACCCAATCAATTTCTTTTGGAACATGAACCGGATCAAGTTCAAGAAAATGAACCTAATCGTCATACATAAGACAAGTCTTCCGACCGAGCCGATAATAAGGCCACTTACTTGGGTTGGCCTAGGCCGAATCTACTGCGACTTCTTAATGTTGCTCTCTAAAATTTAATTATGTCTAAGTAGTCCAACAACCATAAATTATAATTCTAATATGATAGTTGGTTGACCTAATTTTGCATAAAATAATTTAAACTTTCTCTCAATAATTTAAATTAGCTAAGTCTAATTTTGCATAAAATAATTTAAATTACTCCTAATAATTTAAAGTAGCTAAGCCTAATTATGCATAAATAGTTTAAACTTGACTAAAATTTTAAAGTAGTAAAAAAAAGTAGTCATACTAACTTTAAACGTTTCCGAAAAGTTAAAACTAGGGGAAAATGTTTGAGCGTATCATACCCAAGTCGGATCAGCCAAAATGTCGGTTTTGAGCCGTCAGAAAGTATACTCTCCAACTGGCTTCAAACCGTTCAAGTGAGATGATAAAATGAAATGAGGGACAGGGAGGCCAACTCCCCTCGATAATATTAAATTTTAAATAAAATATTAAAAAAATTATTAAAAAGTAAATAATTACGAGGTTTTAGGGCATAAATCCCGACAATCTCCCACTTACACTAAAGCTAGTGAGACATGTGTCCTAGAGCATACTCTATACCGAACACGTTCTCCCACTTACCCTAAAGAAAATAAGACATGTCTCGTAATCCTAGACATTCTAGGTAACCCTCAAACACTTTAGCTTGGAGAGTCTTTTTATATAATCAAAATGACTGTCCTTACAAGTCATTTTGGTCGCTTCCTCTCGAAATCATACCCTAAACATTGGTGTTTTATAATTTTCTTAATATTAGTCTTTGTATGATTATTATCGTAATAAAAAGCGACCGAGTAAATCATATCTGAAACACCAAAAAATGTTTAAGAAATTTTTATATATTTGAAACACAATATGCAAAAATGATATAGAGAATAATAATAATATAATATCAACCACTTGACGCTCATTCGATGCATCCACTATGGTTNAAACACAATATGCAAAAATGATATAGAGAATAATAATAATATAATATCAACCACTTGACGCTCATTCGATGCATCCACTATGGTTATTTCATATCCTCCTTTTCCTTTTCGTATTATTTTGCTTACTATACCTGTTGTTGTAGCATTATAAACATTATTATTACTTTTACTCCCGTCGGGATAAATCTGACCCTACCCCTCCCGCCTACGTATATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTCAGGATAAATCTGACCCTACCCCTGTTCCCGCCTACGTACATGGGATATTTTAAGAAGTGAACATCTTTCTTCCCGTNTATCTCTAACCAGGAACATGCCCTACCACAAGAATATTTTTTAGTGGGACGATAGCTCTGAAACCCATCTTTTCTTTATTCTCGGGAGAAATACTATCGGGGCTAATTCAAACCCCGAGTAAAATAAGCCTCACACCTTAAACATCTTTAATTAAAATATTATAAGATAAATAAATTATTTTTACAAAAAAAAAAATGTCATGTCCTTTCTAAACATTAATCTTTTCANTTTTCTTTTTGTAGGCGGATACAATCGAGACAAAATTCTCGGAACAAAAAAATTCTCATCGCTCATGTAAGAAGAACTTCCAAACCCGAACGAACAAAAAAAAAATGATAAAATATGAGATGGGTCGTCTTCCCTTCTTCGCCATAGATCTCTTTTTGAAGCTCTTTCTCATCTATTTCCCTTTTTCCCTCAGGGTCTTTAAGATCTTGGTCTATTGAGTATAATCTGTTTCTTGAAAGGTAATTAAACTCTGTTTCTCTCTTGGTTGCTTGATCCTTAATCTCGGTAAATTGTGTGATTTTGTTTCTGGGTTGTTTGTTTTTTTTGGTACATGATTTGGTTTTTGTGGAAATTAATGATTGTTCTTGATATTGCTACGTGGTCTCTCTAATTGTCGGATGATGATGATGATGTTCTGCAATGAACAGAGCTTAACTCCATGGGAAGATTGGTTCTCTCTACTGCTTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAATGCCTGTGAGGGAAATCAACAGTAAGGGGGAGTTTATAAGCTTGTGGGTTGTTTGTAGAAATTGTTTTTGCAGCCCATTTAATCACCATGCATTGCTAACGACTCTTCACATATTGTCCATTTTGAGCCTAAGCTCTCGTTGCTTTGTGTTGGGCTTCCCCAAAAAGCCTAACAATCCTCTCCTCGAACAAAGTACACTATAGAGCCTCCTTTGAGACCTATGGAGCCCTCGAACAACCTCCCTTTAATCGAGTCTCGACTCCTTCTCTGGAGTCCTCGAACAAATTACACCCTTTGTTTGACACCTGAGTCACTTGTGACTACACTTTCGAGGCTTATAACTTCTTTGTTCGACATTTGAGGATTCTATTGACGTGCTTAAGTTAAGGGCATGGCTTTGATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTTGCTTTGCTTTGGGCTTCTCCAAAAGGCCTCATAGCAATAGAGATGTATTCCTTATTTATAAACTCATGATCATTCCCTAAATTAGCTAATGTAGGACTCCCTTCCAACAATCATCTCCTCAAACAAACTACACTATAGAGCCTCTCCTGAGGCCTATGGAGCCCTCGAACAACCTCCCTTTAATCGAGTCTCGACTCCTTCTCTGGAGTCCTCGAACAAATTACACCCTTTGTTCGACACCTGAGTCACTTGTGACTACACTTTCGAGGCTTATAACTTCTTTGTTCGACATTTGAGGATTCTATTGACGTGCTTAAGTTAAGGGCATGGCTTTGATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCACAGCTTTGCTTTGGGCTTCCTCAAAAGACCTCATACCAATGGAGATGTATTCCTATTCCGTAAATTAGCCAATGTGGGACTCCCTCCCAACATGCACGGGATTTGGGGCTTGGATGTGATTTATTTTTGTGCCATTAAAGATTTATGTAGCTGTTTTTGCTTAGCTTGTTCAATGAAACATAAGGTCAGGTAGCACGTAAATATAGACTCTTGAACATTTGGACTTCTGTGATTATTGCAGCTTTTGAGAACTTTCTGTAATGACTTGAAATTTATCAGTAGAAAGGTTTGGACATTACTTGAACCGGTTTGAATAATGAAAGAACATGAGGAGATCCTGTAACGACCCAAGTCTACTGCTAGCAGATATTGTCCTTTTTAGGTTTTCTCTTTCGGGTTTCCCCTCAAGACTTTAAAACGCGCCTTATAAAGGGTGTTTTGTTCTCCTCTCCAACCAATTTGGGACATCACAGATCTACTGATTTTGGGGAAATTTTACTTCGATCGACGATCACTCTCTTAATGTGCATCGAGTTTGTTTTAGACGAGCTCGGTGGTTCTGATGGTCTCTGTCTTGTAAAGATTCTGTATGATAGATTATATGTACTGTTTATCTGTGTAGTGCATATGATTTGATTATTCCATTTGTTGTTCTTCTTTTCAAAAGCTGTCGGATGGATCAGCACGGGCATTGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGAGCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAGCTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGGCTTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTGGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGGGCCCCGGAGATGCACTTCCTTACTATATGTCGTCTCAGCACGCATCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCGGGTAGTTATACTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCGATCAATAGTAGCTTGCAGCGCCGAGGTGAAGGAGAACCGTACGTCTCTCTGTCCTTTTCGTGCTGGTACGTATATATATGCTTCATTATGTCTACTAGCTTCAAGTAAATTTCATGTTTTTGTGTTTAGATTCTCTTTAGTCTTCTGTAATTATGATGTCCCACGTTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGAGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGGGCCGAGGTCGTTACAGTAACGCACGTTTTAGTGAAAACACTGGCTTGTAAAATGCATTATGAGTATATTATCTTCAATCATATATACAGCTTACAGTTCTTCAATCTCTATTTGTGTTTGCATATCTTAGACTATGGATTTGTAGATCCTATGAACTACATAAACAGTGATCACAAACACACAAATCAATGTCGACCCCGAACTATATAAGCTTGCTACCGCAACGAAGATTCATTCCTTATAAAAATTCGTCCCGAACTATCCAAACTTTGGCTTCTCAACTCTAGGCTACACAACTTCAAACTTTTCGAACTCGAGAACCGAACACCTTCATGAATCGCCTCGTAGTTTGATTTTAGATTTCCATTTGGCCTATACTCACCATTTTCGTGTCAATTGTTGTGAATGGAGTCTGCTCCGAAGCAAGCTCACATTGATTCCGAACCACACACACACACACAACAGACTGACTGGAGAATTTACATAGAAGAGCGTCATACTTTATGTAGATATTTCGCTTGACGAGAGTCGATAATCTTGATTGAGCTTGAAAAAGTCTTCGTATTTTGTTCATCCTTCAATTCTTAAGCGGAAATAATCATTTAAAAACATCTTCATGAAACTATGTCATAGACTTGCATGTTTAAATAACGATCGAAATGTTAAAATAAATAAAAATGAAACAGTAAAGCCCTATACTAACCTAAAGTCTACGAAATTAAATACGACTACCCTATGCATGTGCCATGGTCTTTCATTGTGATGTTGTAGTCAGTCGTACAGGGATGCCTTACTTTTATCTGAAATATAGAAGTAGCACATGACTTGAGTATTTTAAGAAATACTCAGTAATTGACCCCACTGTTGGGGTCGGGAATGCAAACACATGCAAAACATGATTAGAGACCTATTATTTAAATTTTAAGAAATACTCAGTAAGTGACCCCACTGTTGGGGTCGGGAATGCAAACACATGCAAAACAAGATTAGAGACCTATTATTTAAAACCATCATAGAGGTGGCCTTCAGTCCAGACAAAATTGGATGTGCAGTACTTTCCTAAACCCCAAACCAGTAAAGCCTTATACTAACCTAAAGTCTACGAATTAAATACGACTACCCTATGCTTGTGTCATGGTCTTTAATTGTGATGTTGTCATCAGCCGTACAGGGATGCCTCAATTTTACCTGAAATATAGAAGTAGCACATGACTTGAGTATTTTAAGAAATACTCAGTAAATGACCCCACTGTTGGGGTCGAGGATGCAAACACATGCAAAACATGATTAGAGACCTATTATTTAAAACCATCATAGAGGTGGCCTCCAGTCCAGACAAAATTGGATGTGCAGTACTTTCCTAAACCCCAAACCAGTAAAGCCTTATACTAACCTAAAGTCTATGAAATTAAATACGACTACCCTATGCATGTTCCATGGTCTTTAATTGTGATGCTTTCGTCAGTCAGGGATGCCTTACTTTTACCTGAAATATAAAAGTACCACATGACTTGAGTATTTTAAGAAATACTCAGTAATTGACCCCACTGTTGGGGGTCGGGAATGCAAACACATGCAAAACATGATTAGAGACCTATTATTTAAAACCATCATAGAGGTGGCCTCCAGTCCAGACAAAATTGGATGTGTAGTACTTTCCTACACACGATCCACACGTGCGAACCCATATAAAAAGAAATGTAGATTTCTTTTTCTTTCTTGCTACTTAATGTTATATTATAAGAATAGCTTCTGTTTGATTCAAAATAAAATACATGAACACTTCAGTTTGACTAGTGTATCGATGTTGGACATGTGTCGGACACTTGAACACCCGTACGAGTTCAACCCAAGGCCGCCGCTAACAAATATTGTCCTATTTGGGCTTTTCCTTTCGGGTTTCCCCTCAAGGTTTTTAAAATGCGTCTACTAGGAAGAGGTTTCCACACTCTTATAAAGAATACTCCGTTCCCCTTTCCAACCGATGTGGGATCTCACAATCCACGTCCCTTCGGGGCTCAACATCCTTGTTGGCACTCGTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCCCTTTAGGGCCCAGATCCCACATCGTTTATAAAGGGGAACAGAGCATTCTTTATAAGGGTGTGGAAACCTCTTTCTAGCAGATGCGTTTTAAAATCTTGAAGGGAAGCCCGGAAGGAAAAGTGCAAAGAGGACAATATTTGCTAACGGTGAGCTTTAGCATGTTTCATGGTATATAACAGCTAATGATATGAATGAGGATTGTGATAGTGGCTGCATTGGGGAAGACAATGACAGACAAAGGCGAGGTCATCAACTTCTTGTTTTGTGGATGAAAATGAAGAACAAAAAAGTAATGATTGTTGTCTCTAGTTTTGTCTAGAGTATCGGTTTACTACCATTGATCTTGTCGAGATAATAGAAGGACGAATTTTGATCGGGAAATTCCGACGTAAGTGTTTCATGTTTCGAGTCGAATCAAGCATGGTTGTTGAGTCTATGGAAAGAAGTAACAAGAATTGGTAAACTCCTCATACACCGACACGTGCATCTCCGTTCGAAAGATCCCACCTATCTTTCCTAGAAACCCTTGTTTATTCATTTCGTATTCATTTCGTTCGAAAGCGGTTGAAAGTTTGATTCGGTTGCTTAACGTAGAGGAAATTCGGTTACCTCGGGATCTGATTGGCCATGATGTTGGGTAATTATCATGCTTCTGATTTACTTGTCAAAAGCTATGGATATGACGAAAATGTTTACAATCTCGCCGTTATTACTCGGGTGGTGAAATCTTACAGGAGAATGATTGTAACACCCCAAGCCCACCGCTAGCAGATATTGTCCGTTTTGGCCCGTCACGTATAGTCGTCAGCCTCACGGTTTTAAAACACGTCTACTAGAGCAATCGAGATATTGTCTGTTTTGGCCCGTCACGTATACACGTACATGTTGGCCCGTCACGTACACCCTTCGTTCTCCTCTCCAACCAATGTGGCATCTCACACGGGTGGATAGAGCAATCGAGATTCACCTGAAGGTAAGGAAAGTCCCGTTTATATATCGCTCGGGAAATGGTAAGTTTCATCTGAAGGTCGATTTTTTAGTGATATTAACATGAATTTTTTCGAAGTTTGCAGGCACATTATGAAGAACGAGCATTTGGATCGAGTTACCGAAAAACAGAAAGCCGGGTTGTGACGACGAGTACGCAAAACGAGATAAATCCGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCATAATGACATTCAAACCTTGCCAGCGTACGGGAACGATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTTTTCTAGAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACGGTCCTGTCAAACCAAGACAGAAACATTCTGGTATGTTGCAGCTCTTACCTTATCTTGCACAGCATAAATTTCTTTGCTGGCATTCAAATACAATGCATTAACAGCTTGGCCAGCTGTTAATGAGCTGAACCAAACACCAAACGTTTGAAATTTACAGCTTAAACATTGAAAGAAAACACTGTCATATCTCTAATCTAATCCTATATATACACCGAACGAGAGAGAGCTTCGGTTTGTAACCCGACTCTTGAGCGTTTTACTGAAACTTACATAACTTTTGGACAGGTTTTTGGATCATTGGACAAATTCGAGTCGAGTTTTCCCTTTCTTACAAAAGGTCTAACGATCTCGGAGTCTCGAGGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGTAGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTGTCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAAATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAATGAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTAAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTGGTTGGTGAGAAGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTTCGACACATCGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATCGGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGGTTTTGTCTTCTTCGAGGTTGAGCTTATACAACTT

mRNA sequence

ATGGAGGCGGATACAATCGAGACAAAATTCTCGGAACAAAAAAATTCTCATCGCTCATGGTCTTTAAGATCTTGGTCTATTGAGTATAATCTGTTTCTTGAAAGCTGTCGGATGGATCAGCACGGGCATTGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGAGCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAGCTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGGCTTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTGGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGGGCCCCGGAGATGCACTTCCTTACTATATGTCGTCTCAGCACGCATCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCGGGTAGTTATACTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCGATCAATAGTAGCTTGCAGCGCCGAGGTGAAGGAGAACCGTACGTCTCTCTGTCCTTTTCGTGCTGGCACATTATGAAGAACGAGCATTTGGATCGAGTTACCGAAAAACAGAAAGCCGGGTTGTGACGACGAGTACGCAAAACGAGATAAATCCGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCATAATGACATTCAAACCTTGCCAGCGTACGGGAACGATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTTTTCTAGAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACGGTCCTGTCAAACCAAGACAGAAACATTCTGGTTTTTGGATCATTGGACAAATTCGAGTCGAGTTTTCCCTTTCTTACAAAAGGTCTAACGATCTCGGAGTCTCGAGGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGTAGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTGTCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAAATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAATGAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTAAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTGGTTGGTGAGAAGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTTCGACACATCGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATCGGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGGTTTTGTCTTCTTCGAGGTTGAGCTTATACAACTT

Coding sequence (CDS)

ATGGAGGCGGATACAATCGAGACAAAATTCTCGGAACAAAAAAATTCTCATCGCTCATGGTCTTTAAGATCTTGGTCTATTGAGTATAATCTGTTTCTTGAAAGCTGTCGGATGGATCAGCACGGGCATTGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGAGCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAGCTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGGCTTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTGGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGGGCCCCGGAGATGCACTTCCTTACTATATGTCGTCTCAGCACGCATCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCGGGTAGTTATACTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCGATCAATAG

Protein sequence

MEADTIETKFSEQKNSHRSWSLRSWSIEYNLFLESCRMDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQMWQHGQDRTPTDQ

Homology

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BLAST of Cp4.1LG18g00690 vs. Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.4e-66
Identity = 149/252 (59.13%), Postives = 171/252 (67.86%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHQLAYQ 97
           MDQ  H QS +M          YG++ Y  + M+    + A   +QP        QLA+ 
Sbjct: 1   MDQQDHGQSGAMN---------YGTNPYQTNPMSTTAATVAGGAAQPG-------QLAFH 60

Query: 98  HIHQQQQQQ-LQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP 157
            IHQQQQQQ L QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 61  QIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 120

Query: 158 VLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 217
           V+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE
Sbjct: 121 VVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDE 180

Query: 218 ALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQM 277
            L SIPRG++         PY       + +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 VLGSIPRGTVPEAAAA-GYPYGYLPAGTAPIGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 278 WQHGQDRTPTDQ 289
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Cp4.1LG18g00690 vs. Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.9e-63
Identity = 138/230 (60.00%), Postives = 156/230 (67.83%), Query Frame = 1


Query: 49  MGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQ 108
           M   G    + YGS+ Y  + MT  PT                   AY  IHQQQQQQL 
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSDHP--------------AYHQIHQQQQQQLT 60

Query: 109 QQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFIL 168
           QQLQ+FW  Q++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL
Sbjct: 61  QQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 120

Query: 169 ELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITV 228
           ELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE L  +   + T 
Sbjct: 121 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 180

Query: 229 GGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQMWQ 279
            G     PY       + +G PGM+MG    +PG+Y    +PYM   MWQ
Sbjct: 181 AG----YPYGYLPPGTAPIGNPGMVMG----NPGAY--PPNPYMGQPMWQ 206

[Close]

BLAST of Cp4.1LG18g00690 vs. Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.1e-53
Identity = 125/208 (60.10%), Postives = 144/208 (69.23%), Query Frame = 1


Query: 74  PTSGAQSTSQPSGAQL--AQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNH 133
           P S A     P G  +  A    +Y H+ QQQQQQLQ     FW+ Q QEIE+V DFKNH
Sbjct: 9   PPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQ----LFWTYQRQEIEQVNDFKNH 68

Query: 134 SLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDI 193
            LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDI
Sbjct: 69  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 128

Query: 194 AAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPG 253
           AAAITRTDIFDFLVDIVPR+++KDEA  ++  G + V      +PYY         G  G
Sbjct: 129 AAAITRTDIFDFLVDIVPRDEIKDEA--AVLGGGMVVAPTASGVPYYYPPM-GQPAGPGG 188

Query: 254 MIMGKPVMDP-GSYTQQSHPYMPPQMWQ 279
           M++G+P MDP G Y Q      P Q WQ
Sbjct: 189 MMIGRPAMDPNGVYVQP-----PSQAWQ 204

[Close]

BLAST of Cp4.1LG18g00690 vs. Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.9e-52
Identity = 126/208 (60.58%), Postives = 141/208 (67.79%), Query Frame = 1


Query: 74  PTSGAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSL 133
           P SG+ S     GA        Y H+ QQQQQQLQ     FW+ Q QEIE+V DFKNH L
Sbjct: 31  PPSGSASIVTGGGA-------TYHHLLQQQQQQLQM----FWTYQRQEIEQVNDFKNHQL 90

Query: 134 PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 193
           PLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Sbjct: 91  PLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA 150

Query: 194 AITRTDIFDFLVDIVPREDLKDEA-LTSIPRGSITVGGPGDALPYYMSSQHASQVGTP-G 253
           AITRTDIFDFLVDIVPRE++K+E    S   G   V      +PYY       Q   P G
Sbjct: 151 AITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPM--GQPAVPGG 210

Query: 254 MIMGKPVMDP-GSYTQQSHPYMPPQMWQ 279
           M++G+P MDP G Y Q      P Q WQ
Sbjct: 211 MMIGRPAMDPSGVYAQP-----PSQAWQ 220

[Close]

BLAST of Cp4.1LG18g00690 vs. Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 4.5e-51
Identity = 112/163 (68.71%), Postives = 128/163 (78.53%), Query Frame = 1


Query: 85  SGAQLAQHQLAYQ---HIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKI 144
           SG   A   +A+Q   H H   QQQ QQQLQ FW+NQ QEIE   DFKNH+LPLARIKKI
Sbjct: 26  SGPVNAASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKI 85

Query: 145 MKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIF 204
           MKADEDVRMISAEAPV+FA+ACEMFILELTLR+W HTEENKRRTLQKNDIAAAI+RTD+F
Sbjct: 86  MKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVF 145

Query: 205 DFLVDIVPREDLKDEALTSIPRGSI--TVGGPGDALPYYMSSQ 243
           DFLVDI+PR++LK+E L  + +G+I   VG P    PYY   Q
Sbjct: 146 DFLVDIIPRDELKEEGL-GVTKGTIPSVVGSP----PYYYLQQ 183

[Close]

BLAST of Cp4.1LG18g00690 vs. TrEMBL
Match: A0A0A0LW22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570150 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 4.5e-119
Identity = 223/259 (86.10%), Postives = 231/259 (89.19%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGA--------QSTSQPSGAQL 97
           MDQ GH Q PSMGAVGSGGQIAYGS++YHP+QM+VGPTSG+        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 98  AQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 157
           AQHQLAYQHIHQQQQQQLQQQLQ FW NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 158 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 217
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 218 REDLKDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSH 277
           REDLKDE LTSIPRGS+TVGGPGD LPYYM SQHA QVG PGMIMGKPVMDP  Y  QSH
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240

Query: 278 PYMPPQMWQHGQDRTPTDQ 289
           PYM PQMWQH QD+ P DQ
Sbjct: 241 PYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of Cp4.1LG18g00690 vs. TrEMBL
Match: G7KYQ4_MEDTR (Nuclear transcription factor Y protein OS=Medicago truncatula GN=MTR_7g113680 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 9.2e-104
Identity = 207/274 (75.55%), Postives = 221/274 (80.66%), Query Frame = 1


Query: 21  SLRSWSIEYNL--FLESCRMDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTS-- 80
           SLR     +N   F E  RMD  GH Q+P MG VGSG Q+ YGS+ Y  +QMT  P S  
Sbjct: 34  SLRGSQFSWNQASFFEG-RMDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAPGSVV 93

Query: 81  ----GAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHS 140
               G QST QP+GAQL QHQLAYQHIHQQQQQQLQQQLQ+FWSNQYQEIE+V DFKNHS
Sbjct: 94  TSVGGMQSTGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHS 153

Query: 141 LPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIA 200
           LPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIA
Sbjct: 154 LPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIA 213

Query: 201 AAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPG 260
           AAITRTDIFDFLVDIVPREDLKDE L SIPRG++ V GP DALPY YM  QHASQVGT G
Sbjct: 214 AAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGTAG 273

Query: 261 MIMGKPVMDPGSYTQQSHPYMPPQMWQHGQDRTP 286
           +IMGKPVMDP  Y QQ HPYM PQMW    ++ P
Sbjct: 274 VIMGKPVMDPNMYAQQPHPYMAPQMWPQPPEQRP 306

[Close]

BLAST of Cp4.1LG18g00690 vs. TrEMBL
Match: I3TAX9_MEDTR (Nuclear transcription factor Y subunit C2 OS=Medicago truncatula GN=NF-YC2 PE=2 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 6.0e-103
Identity = 200/255 (78.43%), Postives = 213/255 (83.53%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTS------GAQSTSQPSGAQLAQ 97
           MD  GH Q+P MG VGSG Q+ YGS+ Y  +QMT  P S      G QST QP+GAQL Q
Sbjct: 1   MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAPGSVVTSVGGMQSTGQPAGAQLGQ 60

Query: 98  HQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMI 157
           HQLAYQHIHQQQQQQLQQQLQ+FWSNQYQEIE+V DFKNHSLPLARIKKIMKADEDVRMI
Sbjct: 61  HQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMI 120

Query: 158 SAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE 217
           SAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE
Sbjct: 121 SAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE 180

Query: 218 DLKDEALTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHP 277
           DLKDE L SIPRG++ V GP DALPY YM  QHASQVGT G+IMGKPVMDP  Y QQ HP
Sbjct: 181 DLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGTAGVIMGKPVMDPNMYAQQPHP 240

Query: 278 YMPPQMWQHGQDRTP 286
           YM PQMW    ++ P
Sbjct: 241 YMAPQMWPQPPEQRP 255

[Close]

BLAST of Cp4.1LG18g00690 vs. TrEMBL
Match: A0A061FA52_THECC (Nuclear transcription factor Y subunit C-9 isoform 1 OS=Theobroma cacao GN=TCM_026585 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.9e-102
Identity = 197/250 (78.80%), Postives = 213/250 (85.20%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQ----STSQPSGAQLAQHQ 97
           MDQ GH Q P+MG +GSG Q+ YGS+ Y  +Q+  GP  G+       SQP+GAQLAQHQ
Sbjct: 1   MDQQGHGQPPAMGMIGSGAQVPYGSNPYQ-NQVAGGPNPGSVVTSVGASQPTGAQLAQHQ 60

Query: 98  LAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISA 157
           LAYQ IH QQQQQLQQQLQAFW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVRMISA
Sbjct: 61  LAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA 120

Query: 158 EAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 217
           EAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL
Sbjct: 121 EAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 180

Query: 218 KDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMP 277
           KDE L SIPRG++ VGGP DAL YYM +QHASQVGTPGMIMGKPVMDP  Y QQSHPYM 
Sbjct: 181 KDEVLASIPRGTMPVGGPADALSYYMPAQHASQVGTPGMIMGKPVMDPAMYAQQSHPYMA 240

Query: 278 PQMWQHGQDR 284
            QMW  G ++
Sbjct: 241 QQMWPSGPEQ 249

[Close]

BLAST of Cp4.1LG18g00690 vs. TrEMBL
Match: I1NC07_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 379.0 bits (972), Expect = 5.1e-102
Identity = 200/257 (77.82%), Postives = 212/257 (82.49%), Query Frame = 1


Query: 32  FLESCRMDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQST----SQPSGA 91
           F E  +MD  GH Q+PSMG VGSG Q+AYGS+ Y P Q+T  P S   S     S P+GA
Sbjct: 28  FGEGNKMDHQGHSQNPSMGVVGSGAQLAYGSNPYQPGQITGPPGSVVTSVGTIQSTPAGA 87

Query: 92  QLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADED 151
           QL QHQLAYQHIHQQQQ QLQQQLQ FWSNQYQEIE+V DFKNHSLPLARIKKIMKADED
Sbjct: 88  QLGQHQLAYQHIHQQQQHQLQQQLQQFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADED 147

Query: 152 VRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDI 211
           VRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDI
Sbjct: 148 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDI 207

Query: 212 VPREDLKDEALTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPGMIMGKPVMDPGSYTQ 271
           VPREDLKDE L SIPRG++ V GP DALPY YM  QHASQVG  G+IMGKPVMDP  Y Q
Sbjct: 208 VPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGAAGVIMGKPVMDPNMYAQ 267

Query: 272 QSHPYMPPQMWQHGQDR 284
           QSHPYM PQMW    D+
Sbjct: 268 QSHPYMAPQMWPQPPDQ 284

[Close]

BLAST of Cp4.1LG18g00690 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9)

HSP 1 Score: 252.3 bits (643), Expect = 3.6e-67
Identity = 149/252 (59.13%), Postives = 171/252 (67.86%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHQLAYQ 97
           MDQ  H QS +M          YG++ Y  + M+    + A   +QP        QLA+ 
Sbjct: 1   MDQQDHGQSGAMN---------YGTNPYQTNPMSTTAATVAGGAAQPG-------QLAFH 60

Query: 98  HIHQQQQQQ-LQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAP 157
            IHQQQQQQ L QQLQAFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 61  QIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 120

Query: 158 VLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 217
           V+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE
Sbjct: 121 VVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDE 180

Query: 218 ALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQM 277
            L SIPRG++         PY       + +G PGM+MG P    G+Y    +PYM   M
Sbjct: 181 VLGSIPRGTVPEAAAA-GYPYGYLPAGTAPIGNPGMVMGNP---GGAY--PPNPYMGQPM 230

Query: 278 WQHGQDRTPTDQ 289
           WQ      P  +
Sbjct: 241 WQQQAPDQPDQE 230

[Close]

BLAST of Cp4.1LG18g00690 vs. TAIR10
Match: AT1G54830.2 (AT1G54830.2 nuclear factor Y, subunit C3)

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-64
Identity = 138/230 (60.00%), Postives = 156/230 (67.83%), Query Frame = 1


Query: 49  MGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQ 108
           M   G    + YGS+ Y  + MT  PT                   AY  IHQQQQQQL 
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSDHP--------------AYHQIHQQQQQQLT 60

Query: 109 QQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFIL 168
           QQLQ+FW  Q++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL
Sbjct: 61  QQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 120

Query: 169 ELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITV 228
           ELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE L  +   + T 
Sbjct: 121 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 180

Query: 229 GGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQMWQ 279
            G     PY       + +G PGM+MG    +PG+Y    +PYM   MWQ
Sbjct: 181 AG----YPYGYLPPGTAPIGNPGMVMG----NPGAY--PPNPYMGQPMWQ 206

[Close]

BLAST of Cp4.1LG18g00690 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-54
Identity = 125/208 (60.10%), Postives = 144/208 (69.23%), Query Frame = 1


Query: 74  PTSGAQSTSQPSGAQL--AQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNH 133
           P S A     P G  +  A    +Y H+ QQQQQQLQ     FW+ Q QEIE+V DFKNH
Sbjct: 9   PPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQ----LFWTYQRQEIEQVNDFKNH 68

Query: 134 SLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDI 193
            LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDI
Sbjct: 69  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 128

Query: 194 AAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPG 253
           AAAITRTDIFDFLVDIVPR+++KDEA  ++  G + V      +PYY         G  G
Sbjct: 129 AAAITRTDIFDFLVDIVPRDEIKDEA--AVLGGGMVVAPTASGVPYYYPPM-GQPAGPGG 188

Query: 254 MIMGKPVMDP-GSYTQQSHPYMPPQMWQ 279
           M++G+P MDP G Y Q      P Q WQ
Sbjct: 189 MMIGRPAMDPNGVYVQP-----PSQAWQ 204

[Close]

BLAST of Cp4.1LG18g00690 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4)

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-53
Identity = 126/208 (60.58%), Postives = 141/208 (67.79%), Query Frame = 1


Query: 74  PTSGAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSL 133
           P SG+ S     GA        Y H+ QQQQQQLQ     FW+ Q QEIE+V DFKNH L
Sbjct: 31  PPSGSASIVTGGGA-------TYHHLLQQQQQQLQM----FWTYQRQEIEQVNDFKNHQL 90

Query: 134 PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAA 193
           PLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Sbjct: 91  PLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA 150

Query: 194 AITRTDIFDFLVDIVPREDLKDEA-LTSIPRGSITVGGPGDALPYYMSSQHASQVGTP-G 253
           AITRTDIFDFLVDIVPRE++K+E    S   G   V      +PYY       Q   P G
Sbjct: 151 AITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPM--GQPAVPGG 210

Query: 254 MIMGKPVMDP-GSYTQQSHPYMPPQMWQ 279
           M++G+P MDP G Y Q      P Q WQ
Sbjct: 211 MMIGRPAMDPSGVYAQP-----PSQAWQ 220

[Close]

BLAST of Cp4.1LG18g00690 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2)

HSP 1 Score: 203.0 bits (515), Expect = 2.5e-52
Identity = 112/163 (68.71%), Postives = 128/163 (78.53%), Query Frame = 1


Query: 85  SGAQLAQHQLAYQ---HIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKI 144
           SG   A   +A+Q   H H   QQQ QQQLQ FW+NQ QEIE   DFKNH+LPLARIKKI
Sbjct: 26  SGPVNAASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKI 85

Query: 145 MKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIF 204
           MKADEDVRMISAEAPV+FA+ACEMFILELTLR+W HTEENKRRTLQKNDIAAAI+RTD+F
Sbjct: 86  MKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVF 145

Query: 205 DFLVDIVPREDLKDEALTSIPRGSI--TVGGPGDALPYYMSSQ 243
           DFLVDI+PR++LK+E L  + +G+I   VG P    PYY   Q
Sbjct: 146 DFLVDIIPRDELKEEGL-GVTKGTIPSVVGSP----PYYYLQQ 183

[Close]

BLAST of Cp4.1LG18g00690 vs. NCBI nr
Match: gi|778662518|ref|XP_011659897.1| (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 6.5e-119
Identity = 223/259 (86.10%), Postives = 231/259 (89.19%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGA--------QSTSQPSGAQL 97
           MDQ GH Q PSMGAVGSGGQIAYGS++YHP+QM+VGPTSG+        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 98  AQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 157
           AQHQLAYQHIHQQQQQQLQQQLQ FW NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 158 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 217
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 218 REDLKDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSH 277
           REDLKDE LTSIPRGS+TVGGPGD LPYYM SQHA QVG PGMIMGKPVMDP  Y  QSH
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240

Query: 278 PYMPPQMWQHGQDRTPTDQ 289
           PYM PQMWQH QD+ P DQ
Sbjct: 241 PYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of Cp4.1LG18g00690 vs. NCBI nr
Match: gi|659099555|ref|XP_008450660.1| (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo])

HSP 1 Score: 430.6 bits (1106), Expect = 2.1e-117
Identity = 223/259 (86.10%), Postives = 230/259 (88.80%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGA--------QSTSQPSGAQL 97
           MDQ GH Q PSMGAVGSGGQIAYGS++YHP+QM VGPTSG+        QSTSQP GAQL
Sbjct: 1   MDQQGHGQ-PSMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 98  AQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 157
           AQHQLAYQHIHQQQQQQLQQQLQ FW NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 158 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 217
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 218 REDLKDEALTSIPRGSITVGGPGDALPYYMSSQHASQVGTPGMIMGKPVMDPGSYTQQSH 277
           REDLKDE LTSIPRGS+TVGGPGD LPYYM SQHA QVG PGMIMGKPVMDP  Y  QSH
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240

Query: 278 PYMPPQMWQHGQDRTPTDQ 289
           PYM PQMWQH QD+ P DQ
Sbjct: 241 PYMAPQMWQHAQDQAPPDQ 258

[Close]

BLAST of Cp4.1LG18g00690 vs. NCBI nr
Match: gi|502113373|ref|XP_004494629.1| (PREDICTED: nuclear transcription factor Y subunit C-3-like [Cicer arietinum])

HSP 1 Score: 388.3 bits (996), Expect = 1.2e-104
Identity = 202/255 (79.22%), Postives = 215/255 (84.31%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTS------GAQSTSQPSGAQLAQ 97
           MD  GH Q+P MG VGSGGQ+ YGS+ Y P+QMT  P S      G QS  QP+GAQL Q
Sbjct: 1   MDHQGHNQNPPMGVVGSGGQMTYGSNPYQPNQMTGAPGSVVTSVGGMQSAGQPAGAQLGQ 60

Query: 98  HQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMI 157
           HQLAYQHIHQQQQQQLQQQLQAFW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVRMI
Sbjct: 61  HQLAYQHIHQQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMI 120

Query: 158 SAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE 217
           SAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE
Sbjct: 121 SAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE 180

Query: 218 DLKDEALTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHP 277
           DLKDE LTSIPRG++ VGGP D+LPY YM  QHA QVGT G+IMGKPVMDP  Y QQ HP
Sbjct: 181 DLKDEVLTSIPRGTMPVGGPADSLPYCYMPPQHAPQVGTAGVIMGKPVMDPNMYAQQPHP 240

Query: 278 YMPPQMWQHGQDRTP 286
           YM PQMW    D+ P
Sbjct: 241 YMAPQMWPQPPDQRP 255

[Close]

BLAST of Cp4.1LG18g00690 vs. NCBI nr
Match: gi|357512031|ref|XP_003626304.1| (nuclear transcription factor Y protein [Medicago truncatula])

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-103
Identity = 207/274 (75.55%), Postives = 221/274 (80.66%), Query Frame = 1


Query: 21  SLRSWSIEYNL--FLESCRMDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTS-- 80
           SLR     +N   F E  RMD  GH Q+P MG VGSG Q+ YGS+ Y  +QMT  P S  
Sbjct: 34  SLRGSQFSWNQASFFEG-RMDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAPGSVV 93

Query: 81  ----GAQSTSQPSGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHS 140
               G QST QP+GAQL QHQLAYQHIHQQQQQQLQQQLQ+FWSNQYQEIE+V DFKNHS
Sbjct: 94  TSVGGMQSTGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHS 153

Query: 141 LPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIA 200
           LPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIA
Sbjct: 154 LPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIA 213

Query: 201 AAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPG 260
           AAITRTDIFDFLVDIVPREDLKDE L SIPRG++ V GP DALPY YM  QHASQVGT G
Sbjct: 214 AAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGTAG 273

Query: 261 MIMGKPVMDPGSYTQQSHPYMPPQMWQHGQDRTP 286
           +IMGKPVMDP  Y QQ HPYM PQMW    ++ P
Sbjct: 274 VIMGKPVMDPNMYAQQPHPYMAPQMWPQPPEQRP 306

[Close]

BLAST of Cp4.1LG18g00690 vs. NCBI nr
Match: gi|1009117208|ref|XP_015875193.1| (PREDICTED: nuclear transcription factor Y subunit C-3-like [Ziziphus jujuba])

HSP 1 Score: 383.6 bits (984), Expect = 2.9e-103
Identity = 202/260 (77.69%), Postives = 218/260 (83.85%), Query Frame = 1


Query: 38  MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGA-------QSTSQPSGAQLA 97
           MD  GH Q+ SMG VG G Q+AYG++ Y  +QMT GP   +       QSTSQP GAQLA
Sbjct: 1   MDHQGHNQAQSMGMVGGGVQMAYGANPYQSNQMTGGPNPSSVASLGAIQSTSQPGGAQLA 60

Query: 98  QHQLAYQHIHQQQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRM 157
           QHQLAYQHIHQQQQQQLQQQLQ+FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVRM
Sbjct: 61  QHQLAYQHIHQQQQQQLQQQLQSFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRM 120

Query: 158 ISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 217
           ISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR
Sbjct: 121 ISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 180

Query: 218 EDLKDEALTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPGMIMGKPVMDPGSYTQQSH 277
           EDLKDE + SIPRG++ VGGP DALPY YM  QHA QVG PGMIMGKPVMDP  Y QQSH
Sbjct: 181 EDLKDEVVASIPRGTVPVGGPADALPYCYMPPQHAPQVGAPGMIMGKPVMDPAMYAQQSH 240

Query: 278 PYMPPQMWQHG--QDRTPTD 288
           PYM  QMWQ    Q ++P+D
Sbjct: 241 PYMAQQMWQQAPDQQQSPSD 260

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g00690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFYC9_ARATH	6.4e-66	59.13	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2...	[more]
NFYC3_ARATH	3.9e-63	60.00	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2...	[more]
NFYC1_ARATH	2.1e-53	60.10	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1...	[more]
NFYC4_ARATH	6.9e-52	60.58	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2...	[more]
NFYC2_ARATH	4.5e-51	68.71	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2...	[more]

BLAST of Cp4.1LG18g00690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW22_CUCSA	4.5e-119	86.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570150 PE=4 SV=1	[more]
G7KYQ4_MEDTR	9.2e-104	75.55	Nuclear transcription factor Y protein OS=Medicago truncatula GN=MTR_7g113680 PE...	[more]
I3TAX9_MEDTR	6.0e-103	78.43	Nuclear transcription factor Y subunit C2 OS=Medicago truncatula GN=NF-YC2 PE=2 ...	[more]
A0A061FA52_THECC	3.9e-102	78.80	Nuclear transcription factor Y subunit C-9 isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
I1NC07_SOYBN	5.1e-102	77.82	Uncharacterized protein OS=Glycine max PE=4 SV=2	[more]

BLAST of Cp4.1LG18g00690 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08970.4	3.6e-67	59.13	nuclear factor Y, subunit C9	[more]
AT1G54830.2	2.2e-64	60.00	nuclear factor Y, subunit C3	[more]
AT3G48590.1	1.2e-54	60.10	nuclear factor Y, subunit C1	[more]
AT5G63470.1	3.9e-53	60.58	nuclear factor Y, subunit C4	[more]
AT1G56170.1	2.5e-52	68.71	nuclear factor Y, subunit C2	[more]

BLAST of Cp4.1LG18g00690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662518\|ref\|XP_011659897.1\|	6.5e-119	86.10	PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus]	[more]
gi\|659099555\|ref\|XP_008450660.1\|	2.1e-117	86.10	PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo]	[more]
gi\|502113373\|ref\|XP_004494629.1\|	1.2e-104	79.22	PREDICTED: nuclear transcription factor Y subunit C-3-like [Cicer arietinum]	[more]
gi\|357512031\|ref\|XP_003626304.1\|	1.3e-103	75.55	nuclear transcription factor Y protein [Medicago truncatula]	[more]
gi\|1009117208\|ref\|XP_015875193.1\|	2.9e-103	77.69	PREDICTED: nuclear transcription factor Y subunit C-3-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR003958	CBFA_NFYB_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g00690.1	Cp4.1LG18g00690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 132..195 score: 8.5
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 133..210 score: 1.0
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 97..204 score: 7.21
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 61..288 score: 3.2E
None	No IPR available	PANTHER	PTHR10252:SF49	SUBFAMILY NOT NAMED	coord: 61..288 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g00690	Cucsa.182170	Cucumber (Gy14) v1	cgycpeB0499
Cp4.1LG18g00690	CmaCh10G010760	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g00690	CmaCh11G011240	Cucurbita maxima (Rimu)	cmacpeB134
Cp4.1LG18g00690	CmoCh10G011560	Cucurbita moschata (Rifu)	cmocpeB056
Cp4.1LG18g00690	Cla005244	Watermelon (97103) v1	cpewmB358
Cp4.1LG18g00690	Csa1G570150	Cucumber (Chinese Long) v2	cpecuB353
Cp4.1LG18g00690	MELO3C015332	Melon (DHL92) v3.5.1	cpemeB331
Cp4.1LG18g00690	ClCG03G016880	Watermelon (Charleston Gray)	cpewcgB328
Cp4.1LG18g00690	CSPI01G26720	Wild cucumber (PI 183967)	cpecpiB354
Cp4.1LG18g00690	Lsi06G001370	Bottle gourd (USVL1VR-Ls)	cpelsiB302
Cp4.1LG18g00690	MELO3C015332.2	Melon (DHL92) v3.6.1	cpemedB389
Cp4.1LG18g00690	CsaV3_1G039060	Cucumber (Chinese Long) v3	cpecucB0432
Cp4.1LG18g00690	Bhi02G001684	Wax gourd	cpewgoB0472
Cp4.1LG18g00690	CsGy1G025960	Cucumber (Gy14) v2	cgybcpeB043
Cp4.1LG18g00690	Carg27604	Silver-seed gourd	carcpeB1115

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG18g00690	Cp4.1LG04g00630	Cucurbita pepo (Zucchini)	cpecpeB366

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g00690	Watermelon (97103) v1	cpewmB359
Cp4.1LG18g00690	Melon (DHL92) v3.5.1	cpemeB333
Cp4.1LG18g00690	Melon (DHL92) v3.6.1	cpemedB391
Cp4.1LG18g00690	Cucumber (Chinese Long) v3	cpecucB0438