Carg27604 (gene) Silver-seed gourd

Overview
NameCarg27604
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNuclear transcription factor Y subunit C
LocationCucurbita_argyrosperma_scaffold_314 : 15528 .. 16286 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAGCACGGGCATGGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGATCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAGCATATCCACCACCACCAGCAGCAACAGCTTCAACAACAGCTCCAGGCCTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTCGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGCCCCCCGGAGATGCACTTCCTTATTGCTATATGTCGTCTCAGCACGCACCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCAGGTAGTTATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCCATCAATAG

mRNA sequence

ATGGATCAGCACGGGCATGGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGATCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAGCATATCCACCACCACCAGCAGCAACAGCTTCAACAACAGCTCCAGGCCTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTCGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGCCCCCCGGAGATGCACTTCCTTATTGCTATATGTCGTCTCAGCACGCACCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCAGGTAGTTATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCCATCAATAG

Coding sequence (CDS)

ATGGATCAGCACGGGCATGGCCAGTCTCCATCCATGGGAGCGGTAGGCAGCGGAGGTCAGATAGCGTATGGTAGCAGCATGTACCATCCCAGCCAAATGACTGTCGGCCCGACATCTGGATCTCAGTCTACTAGTCAGCCAAGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAGCATATCCACCACCACCAGCAGCAACAGCTTCAACAACAGCTCCAGGCCTTTTGGTCAAATCAATACCAAGAGATTGAGAGAGTAATAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAAGACGTGCGAATGATATCAGCCGAGGCACCTGTTTTATTCGCTAGAGCATGTGAAATGTTCATCCTAGAATTGACTTTACGGTCATGGAATCATACCGAAGAGAACAAGCGTAGGACACTGCAAAAGAATGACATTGCTGCAGCTATCACAAGAACTGATATCTTCGACTTTCTCGTTGATATCGTGCCAAGGGAGGATCTGAAAGATGAAGCACTCACGTCGATTCCAAGAGGCTCAATAACGGTCGGGCCCCCCGGAGATGCACTTCCTTATTGCTATATGTCGTCTCAGCACGCACCTCAGGTTGGGACACCAGGAATGATTATGGGCAAGCCCGTGATGGACCCAGGTAGTTATGCTCAACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGGCCAAGATCGAACCCCGACCCATCAATAG

Protein sequence

MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQHIHHHQQQQLQQQLQAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMWQHGQDRTPTHQ
Homology
[Close]
BLAST of Carg27604 vs. NCBI nr
Match: XP_022961597.1 (nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022961598.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata])

HSP 1 Score: 473.4 bits (1217), Expect = 4.8e-130
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ
Sbjct: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60

Query: 61  XXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
           XXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  XXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA
Sbjct: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM
Sbjct: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240

Query: 241 WQHGQDRTPTHQ 253
           WQHGQDRTPTHQ
Sbjct: 241 WQHGQDRTPTHQ 252

[Close]
BLAST of Carg27604 vs. NCBI nr
Match: XP_023516704.1 (nuclear transcription factor Y subunit C-3-like [Cucurbita pepo subsp. pepo] >XP_023516705.1 nuclear transcription factor Y subunit C-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437.6 bits (1124), Expect = 2.9e-119
Identity = 240/252 (95.24%), Postives = 241/252 (95.63%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQ 60
           MDQHGH QSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSG+QSTSQPSGAQLAQH     
Sbjct: 1   MDQHGHCQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGAQSTSQPSGAQLAQHXXXXX 60

Query: 61  XXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120
           XXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Sbjct: 61  XXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPV 120

Query: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180
           LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA
Sbjct: 121 LFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEA 180

Query: 181 LTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQM 240
           LTSIPRGSITVG PGDALPY YMSSQHA QVGTPGMIMGKPVMDPGSY QQSHPYMPPQM
Sbjct: 181 LTSIPRGSITVGGPGDALPY-YMSSQHASQVGTPGMIMGKPVMDPGSYTQQSHPYMPPQM 240

Query: 241 WQHGQDRTPTHQ 253
           WQHGQDRTPT Q
Sbjct: 241 WQHGQDRTPTDQ 251

[Close]
BLAST of Carg27604 vs. NCBI nr
Match: XP_022157074.1 (nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1 nuclear transcription factor Y subunit C-9 [Momordica charantia])

HSP 1 Score: 423.3 bits (1087), Expect = 5.7e-115
Identity = 230/260 (88.46%), Postives = 237/260 (91.15%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ PSMGAVGSGGQ+AYGS++YHPSQMTVGPTSGS        QSTSQPSGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAY XXXXXXXXXXXXXXX FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYXXXXXXXXXXXXXXXXTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRG+ITVG PGDALPYCYM SQHAPQVG PGMIMGKPVMDP  YAQQS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYMPPQMWQH QD+ P  Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]
BLAST of Carg27604 vs. NCBI nr
Match: XP_022933523.1 (nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022933524.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022969894.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_022969901.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_022969911.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_023530278.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo] >XP_023530279.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo] >XP_023530280.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.5 bits (1059), Expect = 1.0e-111
Identity = 226/260 (86.92%), Postives = 232/260 (89.23%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ  SMGAVGSGGQIAYGS++YHP Q+TVG TSGS        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAY XXXXXXXXXXXXXXX FW+NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYXXXXXXXXXXXXXXXXTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRGSITVG PGDALPYCYM SQHAPQVG PGMIMGKPVMDP  YAQQS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYMPPQMWQH QD+ P  Q
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]
BLAST of Carg27604 vs. NCBI nr
Match: XP_011659897.1 (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_011659898.1 PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus] >KGN66090.1 hypothetical protein Csa_1G570150 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 224/260 (86.15%), Postives = 231/260 (88.85%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ PSMGAVGSGGQIAYGS++YHP+QM+VGPTSGS        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAY XXXXXXXXXXXXXXX FW NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYXXXXXXXXXXXXXXXXTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRGS+TVG PGD LPY YM SQHAPQVG PGMIMGKPVMDP  YA QS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYM PQMWQH QD+ P  Q
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 259

[Close]
BLAST of Carg27604 vs. TAIR10
Match: AT1G54830.2 (nuclear factor Y, subunit C3)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-55
Identity = 131/208 (62.98%), Postives = 146/208 (70.19%), Query Frame = 0 

Query: 12  MGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQXXXXXXXXXXX 71
           M   G    + YGS+ Y  + MT  PT                   AY  XXXXXXXXXX
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSDHP--------------AYHQXXXXXXXXXX 60

Query: 72  XXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFIL 131
           XXX +FW  Q++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL
Sbjct: 61  XXXQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 120

Query: 132 ELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITV 191
           ELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE L  +   + T 
Sbjct: 121 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 180

Query: 192 GPPGDALPYCYMSSQHAPQVGTPGMIMG 220
                  PY Y+    AP +G PGM+MG
Sbjct: 181 A----GYPYGYLPPGTAP-IGNPGMVMG 189

[Close]
BLAST of Carg27604 vs. TAIR10
Match: AT3G48590.1 (nuclear factor Y, subunit C1)

HSP 1 Score: 208.0 bits (528), Expect = 6.8e-54
Identity = 112/171 (65.50%), Postives = 129/171 (75.44%), Query Frame = 0 

Query: 77  FWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR 136
           FW+ Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+R
Sbjct: 47  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106

Query: 137 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPGD 196
           SW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDEA  ++  G + V P   
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA--AVLGGGMVVAPTAS 166

Query: 197 ALPYCYMSSQHAPQVGTP----GMIMGKPVMDP-GSYAQQSHPYMPPQMWQ 243
            +PY Y      P +G P    GM++G+P MDP G Y Q      P Q WQ
Sbjct: 167 GVPYYY------PPMGQPAGPGGMMIGRPAMDPNGVYVQP-----PSQAWQ 204

[Close]
BLAST of Carg27604 vs. TAIR10
Match: AT1G56170.1 (nuclear factor Y, subunit C2)

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-49
Identity = 101/144 (70.14%), Postives = 116/144 (80.56%), Query Frame = 0 

Query: 77  FWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR 136
           FW+NQ QEIE   DFKNH+LPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLR
Sbjct: 58  FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 117

Query: 137 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSI--TVGPP 196
           +W HTEENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR++LK+E L  + +G+I   VG P
Sbjct: 118 AWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL-GVTKGTIPSVVGSP 177

Query: 197 GDALPYCYMSS----QHAPQVGTP 215
               PY Y+      QH PQ   P
Sbjct: 178 ----PYYYLQQQGMMQHWPQEQHP 196

[Close]
BLAST of Carg27604 vs. TAIR10
Match: AT5G63470.1 (nuclear factor Y, subunit C4)

HSP 1 Score: 185.7 bits (470), Expect = 3.6e-47
Identity = 103/167 (61.68%), Postives = 114/167 (68.26%), Query Frame = 0 

Query: 77  FWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR 136
           FW+ Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+R
Sbjct: 60  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 119

Query: 137 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPGD 196
           SW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++                    
Sbjct: 120 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIXXXXXXXXXXXXXXXXXXXX 179

Query: 197 ALPYCYMSSQHAPQVGTPGMIMGKPVMDP-GSYAQQSHPYMPPQMWQ 243
                       P V   GM++G+P MDP G YAQ      P Q WQ
Sbjct: 180 XXXXXXXXXMGQPAV-PGGMMIGRPAMDPSGVYAQP-----PSQAWQ 220

[Close]
BLAST of Carg27604 vs. TAIR10
Match: AT1G08970.4 (nuclear factor Y, subunit C9)

HSP 1 Score: 182.2 bits (461), Expect = 4.0e-46
Identity = 102/177 (57.63%), Postives = 112/177 (63.28%), Query Frame = 0 

Query: 76  AFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTL 135
           AFW NQ++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTL
Sbjct: 61  AFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTL 120

Query: 136 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPG 195
           RSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVD                          
Sbjct: 121 RSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVD--XXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 196 DALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMWQHGQDRTPTHQ 253
                          +G PGM+MG P    G+Y    +PYM   MWQ      P  +
Sbjct: 181 XXXXXXXXXXXXXXPIGNPGMVMGNP---GGAY--PPNPYMGQPMWQQQAPDQPDQE 230

[Close]
BLAST of Carg27604 vs. Swiss-Prot
Match: sp|Q9ZVL3|NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-54
Identity = 131/208 (62.98%), Postives = 146/208 (70.19%), Query Frame = 0 

Query: 12  MGAVGSGGQIAYGSSMYHPSQMTVGPTSGSQSTSQPSGAQLAQHQLAYQXXXXXXXXXXX 71
           M   G    + YGS+ Y  + MT  PT                   AY  XXXXXXXXXX
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSDHP--------------AYHQXXXXXXXXXX 60

Query: 72  XXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFIL 131
           XXX +FW  Q++EIE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL
Sbjct: 61  XXXQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 120

Query: 132 ELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITV 191
           ELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DE L  +   + T 
Sbjct: 121 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 180

Query: 192 GPPGDALPYCYMSSQHAPQVGTPGMIMG 220
                  PY Y+    AP +G PGM+MG
Sbjct: 181 A----GYPYGYLPPGTAP-IGNPGMVMG 189

[Close]
BLAST of Carg27604 vs. Swiss-Prot
Match: sp|Q9SMP0|NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-52
Identity = 112/171 (65.50%), Postives = 129/171 (75.44%), Query Frame = 0 

Query: 77  FWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR 136
           FW+ Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+R
Sbjct: 47  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106

Query: 137 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPGD 196
           SW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDEA  ++  G + V P   
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA--AVLGGGMVVAPTAS 166

Query: 197 ALPYCYMSSQHAPQVGTP----GMIMGKPVMDP-GSYAQQSHPYMPPQMWQ 243
            +PY Y      P +G P    GM++G+P MDP G Y Q      P Q WQ
Sbjct: 167 GVPYYY------PPMGQPAGPGGMMIGRPAMDPNGVYVQP-----PSQAWQ 204

[Close]
BLAST of Carg27604 vs. Swiss-Prot
Match: sp|Q8LCG7|NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48
Identity = 101/144 (70.14%), Postives = 116/144 (80.56%), Query Frame = 0 

Query: 77  FWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR 136
           FW+NQ QEIE   DFKNH+LPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLR
Sbjct: 58  FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 117

Query: 137 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSI--TVGPP 196
           +W HTEENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR++LK+E L  + +G+I   VG P
Sbjct: 118 AWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL-GVTKGTIPSVVGSP 177

Query: 197 GDALPYCYMSS----QHAPQVGTP 215
               PY Y+      QH PQ   P
Sbjct: 178 ----PYYYLQQQGMMQHWPQEQHP 196

[Close]
BLAST of Carg27604 vs. Swiss-Prot
Match: sp|Q655V5|NFYC4_ORYSJ (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46
Identity = 138/251 (54.98%), Postives = 160/251 (63.75%), Query Frame = 0 

Query: 10  PSMGAVGSGGQI--AYGSSMYHPSQMTVGPTSGSQSTSQPSGAQ--LAQHQLAYQ---XX 69
           P++G V  G Q+  AY  +   P+   V P     + S P+      AQHQL YQ   XX
Sbjct: 9   PAIGVVAGGSQVYPAYRPAATVPTAPAVIPAGSQPAPSFPANPDQLSAQHQLVYQXXXXX 68

Query: 70  XXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLF 129
           XXXXXXXXXXXXX FW+ +  +IE+  DFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 69  XXXXXXXXXXXXXXFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 128

Query: 130 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALT 189
           A+ACE+FILELTLRSW HTEENKRRTLQKNDIAAAITRTD++DFLVDIVPR+DLK+E + 
Sbjct: 129 AKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGV- 188

Query: 190 SIPRG-SITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYMPPQMW 249
            +PR              Y Y   Q   QV   G+  G          QQ HP    Q  
Sbjct: 189 GLPRAXXXXXXXXXXXXXYGYYVPQQ--QVPGAGIAYG---------GQQGHPGYLWQDP 247

Query: 250 QHGQDRTPTHQ 253
           Q  Q+  P  Q
Sbjct: 249 QEQQEEPPAEQ 247

[Close]
BLAST of Carg27604 vs. Swiss-Prot
Match: sp|Q9FMV5|NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.5e-46
Identity = 103/167 (61.68%), Postives = 114/167 (68.26%), Query Frame = 0 

Query: 77  FWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR 136
           FW+ Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+R
Sbjct: 60  FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 119

Query: 137 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEALTSIPRGSITVGPPGD 196
           SW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++                    
Sbjct: 120 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIXXXXXXXXXXXXXXXXXXXX 179

Query: 197 ALPYCYMSSQHAPQVGTPGMIMGKPVMDP-GSYAQQSHPYMPPQMWQ 243
                       P V   GM++G+P MDP G YAQ      P Q WQ
Sbjct: 180 XXXXXXXXXMGQPAV-PGGMMIGRPAMDPSGVYAQP-----PSQAWQ 220

[Close]
BLAST of Carg27604 vs. TrEMBL
Match: tr|A0A0A0LW22|A0A0A0LW22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570150 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.8e-109
Identity = 224/260 (86.15%), Postives = 231/260 (88.85%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ PSMGAVGSGGQIAYGS++YHP+QM+VGPTSGS        QSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAY XXXXXXXXXXXXXXX FW NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYXXXXXXXXXXXXXXXXTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRGS+TVG PGD LPY YM SQHAPQVG PGMIMGKPVMDP  YA QS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYM PQMWQH QD+ P  Q
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 259

[Close]
BLAST of Carg27604 vs. TrEMBL
Match: tr|A0A1S3BQR3|A0A1S3BQR3_CUCME (nuclear transcription factor Y subunit C-9 OS=Cucumis melo OX=3656 GN=LOC103492182 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 5.8e-108
Identity = 224/260 (86.15%), Postives = 230/260 (88.46%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MDQ GHGQ PSMGAVGSGGQIAYGS++YHP+QM VGPTSGS        QSTSQP GAQL
Sbjct: 1   MDQQGHGQ-PSMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAY XXXXXXXXXXXXXXX FW NQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYXXXXXXXXXXXXXXXXTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE LTSIPRGS+TVG PGD LPY YM SQHAPQVG PGMIMGKPVMDP  YA QS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHGQDRTPTHQ 253
           HPYM PQMWQH QD+ P  Q
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 258

[Close]
BLAST of Carg27604 vs. TrEMBL
Match: tr|M5W0Q0|M5W0Q0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G328500 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.9e-96
Identity = 199/255 (78.04%), Postives = 215/255 (84.31%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSGS--------QSTSQPSGAQL 60
           MD  GH Q  SMG VGSG Q+ YG++ Y  +QM   P  GS        QSTSQ +GAQL
Sbjct: 1   MDPQGHNQPQSMGMVGSGAQLTYGTNPYQHNQMVGSPNPGSVAGTVGAIQSTSQSAGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQXXXXXXXXXXXXXXX+FW+NQYQEI++V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQXXXXXXXXXXXXXXXSFWANQYQEIDKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           REDLKDE L SIPRG+++VG PGDALPYCYM  QHAPQVG PGMIMGKP+MDP  YAQQS
Sbjct: 181 REDLKDEVLASIPRGTVSVGGPGDALPYCYMPPQHAPQVGAPGMIMGKPMMDPSMYAQQS 240

Query: 241 HPYMPPQMWQHGQDR 248
           HPYM   MWQ   ++
Sbjct: 241 HPYMGQPMWQQAPEQ 255

[Close]
BLAST of Carg27604 vs. TrEMBL
Match: tr|K7MZZ0|K7MZZ0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527803 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 3.7e-94
Identity = 200/258 (77.52%), Postives = 212/258 (82.17%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGP----TSGSQSTSQPSGAQLAQHQ 60
           MD  GH Q+PSMG VGSG Q+AYGS+ Y P Q+T  P    TS     S P+GAQL QHQ
Sbjct: 1   MDHQGHSQNPSMGVVGSGAQLAYGSNPYQPGQITGPPGSVVTSVGTIQSTPAGAQLGQHQ 60

Query: 61  LAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVRMISA 120
           LAY XXXXXXXXXXXXXXX FWSNQYQEIE+V DFKNHSLPLARIKKIMKADEDVRMISA
Sbjct: 61  LAYXXXXXXXXXXXXXXXXXFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA 120

Query: 121 EAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 180
           EAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL
Sbjct: 121 EAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 180

Query: 181 KDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQSHPYM 240
           KDE L SIPRG++ V  P DALPYCYM  QHA QVG  G+IMGKPVMDP  YAQQSHPYM
Sbjct: 181 KDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGAAGVIMGKPVMDPNMYAQQSHPYM 240

Query: 241 PPQMWQHGQDR---TPTH 252
            PQMW    D+   +P H
Sbjct: 241 APQMWPQPPDQRQSSPEH 258

[Close]
BLAST of Carg27604 vs. TrEMBL
Match: tr|A0A2R6R313|A0A2R6R313_ACTCH (Nuclear transcription factor Y subunit C-9 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11063 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.4e-93
Identity = 190/249 (76.31%), Postives = 204/249 (81.93%), Query Frame = 0 

Query: 1   MDQHGHGQSPSMGAVGSGGQIAYGSSMYHPSQMTVGPTSG--------SQSTSQPSGAQL 60
           MDQ GHG     G VGS  Q+ YG+S Y P+Q+   P  G        S S SQP+GAQL
Sbjct: 1   MDQQGHGHPQGAGVVGSAAQLHYGTSQYEPNQVNGTPNQGPVVTSVGASLSPSQPTGAQL 60

Query: 61  AQHQLAYQXXXXXXXXXXXXXXXAFWSNQYQEIERVIDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQ     XXXXXXXXXX+FWSNQYQEIE+V DFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQXXXXXXXXXXSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAP++FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEALTSIPRGSITVGPPGDALPYCYMSSQHAPQVGTPGMIMGKPVMDPGSYAQQS 240
           RE+LKDEAL SIPRG+I VG P DA PY YM +QH+PQ GTPGM+MGKPVMDP  YAQQ 
Sbjct: 181 REELKDEALASIPRGTIPVGVPTDAYPYYYMPAQHSPQAGTPGMMMGKPVMDPVMYAQQP 240

Query: 241 HPYMPPQMW 242
           HPYM PQMW
Sbjct: 241 HPYMAPQMW 249

The following BLAST results are available for this feature:
BLAST of Carg27604 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961597.14.8e-130100.00nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_0229615... [more]
XP_023516704.12.9e-11995.24nuclear transcription factor Y subunit C-3-like [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022157074.15.7e-11588.46nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1... [more]
XP_022933523.11.0e-11186.92nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_0229335... [more]
XP_011659897.12.7e-10986.15PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_0116... [more]
BLAST of Carg27604 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G54830.21.2e-5562.98nuclear factor Y, subunit C3[more]
AT3G48590.16.8e-5465.50nuclear factor Y, subunit C1[more]
AT1G56170.11.7e-4970.14nuclear factor Y, subunit C2[more]
AT5G63470.13.6e-4761.68nuclear factor Y, subunit C4[more]
AT1G08970.44.0e-4657.63nuclear factor Y, subunit C9[more]
BLAST of Carg27604 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZVL3|NFYC3_ARATH2.2e-5462.98Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q9SMP0|NFYC1_ARATH1.2e-5265.50Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q8LCG7|NFYC2_ARATH3.1e-4870.14Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
sp|Q655V5|NFYC4_ORYSJ2.9e-4654.98Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39... [more]
sp|Q9FMV5|NFYC4_ARATH6.5e-4661.68Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
BLAST of Carg27604 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LW22|A0A0A0LW22_CUCSA1.8e-10986.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570150 PE=4 SV=1[more]
tr|A0A1S3BQR3|A0A1S3BQR3_CUCME5.8e-10886.15nuclear transcription factor Y subunit C-9 OS=Cucumis melo OX=3656 GN=LOC1034921... [more]
tr|M5W0Q0|M5W0Q0_PRUPE3.9e-9678.04Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G328500 PE=4 SV=1[more]
tr|K7MZZ0|K7MZZ0_SOYBN3.7e-9477.52Uncharacterized protein OS=Glycine max OX=3847 GN=100527803 PE=4 SV=1[more]
tr|A0A2R6R313|A0A2R6R313_ACTCH2.4e-9376.31Nuclear transcription factor Y subunit C-9 like OS=Actinidia chinensis var. chin... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27604-RACarg27604-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 57..173
e-value: 1.4E-47
score: 162.7
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 54..167
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 95..158
e-value: 6.9E-22
score: 77.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..252
NoneNo IPR availablePANTHERPTHR10252:SF75NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATEDcoord: 18..247
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 18..247