Cp4.1LG17g10640 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g10640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	MADS-box transcription factor
Location	Cp4.1LG17 : 8101437 .. 8105557 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCAAGGCAGCAGAAAAAAGAAAGAAAAAAAGAAAAGGAAAATGGTGTAGGTTCATAGTTAGTGAGGAGGGAGAGGGTATGAGGAGGGGATTGGTGAAATAAGCGAAGAATATAAATGGTGACGCACAAAGGTTAAGAGGGGGGGGGGAAAGAGAGAAGTGAAACAAAAAGAGCAAAGAAATTTGATATTTGATTTAGTTTTTGGCATTTCCTTTTCCGTTTGATTTTCGTTTTGATTTTCCGGGAAAATTTGGGATCAAATCTGTTTGGTTAGAGAGAAAAAGGAAAAAAAAGGAAGAACAAAATGGGAAGAGGAAGAGTAGAACTGAAGCGGATAGAGAACAAGATCAACCGGCAAGTGACCTTCGCGAAACGAAGAAATGGTCTGTTGAAGAAAGCTTATGAGCTCTCCGTGCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGGTATCATCATCATCATCATCATCAACAACATCAACAACAACAACAACTGTTGTATTGATCACTAATTTTTTTTATTTTAATCCCGTTTTTGCCATTCTTTCTTTTTAGGTTTTCTGTTTCTTCCCTTTCTTTTTTCCCCTTTCCATGCTAAGAATAAAAGAAAGAGAGAGAATATTTTCAAAAAAAAATTACATATATATATATATATACATAAACGAATGAATCCTTTCCTTTTCGCTTCTCTGTGTTTTCTTCCGTCGTTTCATCCATGGCGTCTCAGAAATTAGGGTTTTCTTCTTCTTCGTCTTCTTCTTCCTCCATGCCGCCATGGATCGATCCATCGATTTAGGGTTTCTTCTTCTTCTTCTCCTCATTTAGGGTTTCCTTACTGTTTTCTTCATGGATCTTTGTTTCTTTTACCGATTAAGAGTTGTAGTTTGTGTTTTCCAAGGGTTTTGATCCGAAATGAGATTTGATTTCTGAGGATTTGTGTTTGTTTTCATGTAAATTTCAAACTAGTAATGGATTTTTTTAATTTGTTCTTACTATTTTGTGTTTGATTATTACTATAATAATTTCAGGCTTCAGGATTCTTCAAAAATTTAAGAAATAGGTTAATTATTGTGTACTTCAAGGTCAATAATTCATGTATTTGTTGATTACTGGGATTTGACATTTAATGATTTTCAAGATCTCTCAAATGTTATTGGGTTTCCTTAATTGTTTTTAACATTTTAAATCAATTTATAATTGAGGGATTTATTTATTTATTTATTTTGGTATTATTATGTGTGAAATCTAGCATGCTGAAAACTCTTGAGAGATACCAGAAATGCAACTATGGAGCGCCAGAGCCAAATGTATCCACAAGAGAAGCCTTGGTAATCACTTTTCTATTATTTATTTTTTAAATTAAGTAGGTTAATTAATTAATCTTTTTTCTTTTTCTTTTTTTTAAATAAAAGATGTTATTATTATTATTATTTGATGATATAAAATGATAGGATGGGTTAATTATAGGAACTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCTCGCTATGAAGCTCTGCAACGATCCCAGAGGTAATAACCCCAACATTTTAGATACCTTTACTTTCCATTTTTGTAGAATATTGATTTCTGATCTAAAGTTTTAGATTCAAGGCTAATTTAGTGCGTGTCTGATCAAAATGTTCTCGATTCATATTGTTTTTCATTTGTTAGGAGTAAAGGGTGTTCATATGACTCGATAACTCGTCCAATTCAGACTACTGATCCCAAACCATAAACGTTCTGTTGAGTTGGATTAGGTTAGATTTTTTTCGGTTTGAGTTAGGTTGAATTTTTTGGAAAATAAAAAAATGCGGGTCAATTCGTTTGTTAATATTTTTTTTGTTGGGTCAACACGACCAACTCGAAAATAGGGTTCCAACTTAACTCAATCGTGTCCTGCTTAGAAGATTGTTATGAAAATTAAAAATATTTTACGTTTGTAACTGATGTTAATGTTGTGTTGTGCCTGTTCAAAATTTTAGTTATTAATGTAACGGAGAGGTAGGATTTTTTAAAATAATCATAAAAAAAACACCTGACAATCGAACCCAACCTGAAAATATAAGGTTAGGTTGGGTTGGATTGTAAATTCTTTTTTAGTTACTTGGGTCACCCATCTAATAAACTCGAAAATTTTGAGTTAGACCAAAAGATTTTTCCAACTCAACTTGACTCATTTAAACCTCTAATGGAAGGCTCTACCATGGTTGTGAAAGAAAATTTGAAGTAATGATATGAGATTACATGTACAATAACTTATCGATTTACATTAAAGTTTAAATAGACACATAATGAGATTAATCGAGTCGTGTTTAGTTGGTTCGGAGATGCTCGGTTATTTAGTAATTATGTTTTCTTTTTTTGTGATAATTTTGAATATAAGCAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAGCTTGATATGTCACTTAAGCAGATCAGATCAACAAGGGTAGTTCTTCAACTTCTCCATTGCCTTTAATAAAACCATCCAAAATTATAATCTTTCTCATTCAATCCTTTTCTAATCTTTTGCAGACTCAGTACATGCTAGATCAGCTCACTGATCTTCAACGTAAGGTATGAGGACACGAACACATATACGACACGATATGAACACTATAATTATATGGTTATAAAAATGAGTTTGATATGTTTCGATCTAAAAAGTAACGAGTATTCAATCTTGTTTTTGTTTGAACAAACTTTCAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGGTATAAAAACGTATCTGTTGATAATATATATATTTTTTAACAAAAAGTTAGAAAATTTTGTAATTGGTGTAAATTTGTGGATTACAGTTGATTGAAGGGTATCAAGTAAATGCCCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTAAATATTCTTCTATTCTTTCCAAAATCTTTTATTCTTACGTTTTTTTAACGTCTTGGCGCTATTAGGCCACGTTCGGCCCGTAGTTTTTGAATTTGTATAGTTGGTACCGAGTCTAAATTTATTGAATTTGTAGGGTTTGTATACGTAGTTTACGCTAGCTGAGTTATGCTGAGAATTTGAACTTTTGATCTCTAGATCGAAAATACATAGTTTATGCTAATTGAGCTACGTTCATTTCGTGTATTACGATTAGCATGATTTATGATTAGCTATGCTGAGGATTTGAACTTTTGACCTCTTGATCGAGAATACATAGTTTATGCTAGTGAGCTATAGTGAGGGTTGAACTTTTGACCTCTTGATCGAGAATACATATTTATGCTAGTTGAGCTATGCGGATGATTTAAACTTTTGACTTCTTGATCGATAACACATAGTTTATACTAGTTGAGCTACATTAATTTCGTATATTATAATTAGCATGATTTATGCTAGTTCTAGACCTACCTAGAATCATAACACCCGATTCAAACTAGGTTGGGGGTGAGAATTTTGTAAGATTAATGTGAAATTGAAGAAGAAATTTATAAGAAACTAAAGAATGAAGATGATTAATTTGCAGGTATCAGCCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCGTTCAAAAATTGGAGAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCCTCCTCCCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAANAAAATCAATTTTCATGCTTGGAACTTATATATATATAATTAATACAAACTCTGCACTTAGTCTTTGTAAGCTAATTATGTGTATGCTATGACTTTGCTTTTTGAACAACAATTGTAATTTCATTATTTTTCTTCCTTTTTCATAAAGTTGTAAGTTTGTGTGTATTTTTATATTTTTTTTTTCATTTTTTTTTTGGAATATTTCTTATATTAGGACTGAAAGATTA

mRNA sequence

TACCCAAGGCAGCAGAAAAAAGAAAGAAAAAAAGAAAAGGAAAATGGTGTAGGTTCATAGTTAGTGAGGAGGGAGAGGGTATGAGGAGGGGATTGGTGAAATAAGCGAAGAATATAAATGGTGACGCACAAAGGTTAAGAGGGGGGGGGGAAAGAGAGAAGTGAAACAAAAAGAGCAAAGAAATTTGATATTTGATTTAGTTTTTGGCATTTCCTTTTCCGTTTGATTTTCGTTTTGATTTTCCGGGAAAATTTGGGATCAAATCTGTTTGGTTAGAGAGAAAAAGGAAAAAAAAGGAAGAACAAAATGGGAAGAGGAAGAGTAGAACTGAAGCGGATAGAGAACAAGATCAACCGGCAAGTGACCTTCGCGAAACGAAGAAATGGTCTGTTGAAGAAAGCTTATGAGCTCTCCGTGCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGCATGCTGAAAACTCTTGAGAGATACCAGAAATGCAACTATGGAGCGCCAGAGCCAAATGTATCCACAAGAGAAGCCTTGGAACTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCTCGCTATGAAGCTCTGCAACGATCCCAGAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAGCTTGATATGTCACTTAAGCAGATCAGATCAACAAGGACTCAGTACATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCCCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAGCCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCGTTCAAAAATTGGAGAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCCTCCTCCCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAANAAAATCAATTTTCATGCTTGGAACTTATATATATATAATTAATACAAACTCTGCACTTAGTCTTTGTAAGCTAATTATGTGTATGCTATGACTTTGCTTTTTGAACAACAATTGTAATTTCATTATTTTTCTTCCTTTTTCATAAAGTTGTAAGTTTGTGTGTATTTTTATATTTTTTTTTTCATTTTTTTTTTGGAATATTTCTTATATTAGGACTGAAAGATTA

Coding sequence (CDS)

ATGGGAAGAGGAAGAGTAGAACTGAAGCGGATAGAGAACAAGATCAACCGGCAAGTGACCTTCGCGAAACGAAGAAATGGTCTGTTGAAGAAAGCTTATGAGCTCTCCGTGCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGCATGCTGAAAACTCTTGAGAGATACCAGAAATGCAACTATGGAGCGCCAGAGCCAAATGTATCCACAAGAGAAGCCTTGGAACTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCTCGCTATGAAGCTCTGCAACGATCCCAGAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAGCTTGATATGTCACTTAAGCAGATCAGATCAACAAGGACTCAGTACATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCCCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAGCCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGA

Protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

Homology

[Close]

BLAST of Cp4.1LG17g10640 vs. Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 401.7 bits (1031), Expect = 5.5e-111
Identity = 209/242 (86.36%), Postives = 221/242 (91.32%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPE N+STREALE+SSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           L+SKELESLERQLDMSLKQIRSTRTQ MLDQL DLQRKEH LNEAN+TLKQRL+EG  +N
Sbjct: 121 LNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
            LQ  Q+A D+ YGRQ  Q   D FFHPL+CEPTLQIGYQ DPITV  AGPS+NN++ GW
Sbjct: 181 -LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQNDPITVGGAGPSVNNYMAGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 241

[Close]

BLAST of Cp4.1LG17g10640 vs. Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.1e-102
Identity = 200/248 (80.65%), Postives = 222/248 (89.52%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKR+ENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREA--LELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSMLKTLERYQKCNYGAPE NV+++EA  LELSSQQEYLKLKARYE+LQRSQRNL+GEDL
Sbjct: 61  SSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLSSK+LE+LERQLD SLKQIRSTRTQ+MLDQL DLQRKEHLL EAN+ L+QR+ EGYQ
Sbjct: 121 GPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM-EGYQ 180

Query: 181 VNALQLNQSADDMMYGR-QQAQPPSDAFF--HPLDCEPTLQIGY-QPDPITVVTAGPSMN 240
           +N+LQLN SA+DM YGR  Q     D  F   P++CEPTLQIGY Q DP +VVTAGPSMN
Sbjct: 181 INSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMN 240

Query: 241 NFLPGWLP 243
           N++ GWLP
Sbjct: 241 NYMGGWLP 247

[Close]

BLAST of Cp4.1LG17g10640 vs. Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.5e-95
Identity = 191/247 (77.33%), Postives = 211/247 (85.43%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELESLERQLD SLKQIR+ RTQ+MLDQL DLQ KE +L E NKTL+ RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNN 240
           +  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 240

Query: 241 FLPGWLP 243
           ++ GWLP
Sbjct: 241 YMLGWLP 245

[Close]

BLAST of Cp4.1LG17g10640 vs. Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.6e-94
Identity = 189/249 (75.90%), Postives = 209/249 (83.94%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSM++TLERYQKCNYG PEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELE LERQLD SLKQIR+ RTQ+MLDQL DLQ KE +LNE NKTL+ RL +GYQ
Sbjct: 121 GPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSADD--MMYGR---QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSM 240
           +  LQLN + +D  + YGR   QQ Q    AFF PL+CEP LQ+GYQ      + AGPS 
Sbjct: 181 M-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHGMEAGPSE 240

Query: 241 NNFLPGWLP 243
           NN++ GWLP
Sbjct: 241 NNYMLGWLP 248

[Close]

BLAST of Cp4.1LG17g10640 vs. Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 7.2e-87
Identity = 179/245 (73.06%), Postives = 200/245 (81.63%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELK IENKINRQVTFAKRR  LLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           +SMLKTLE+YQKCN+G+PE  + +RE    SSQQEYLKLK R EALQRSQRNLLGEDLGP
Sbjct: 61  TSMLKTLEKYQKCNFGSPESTIISRET--QSSQQEYLKLKNRVEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           L SKELE LERQLD SL+QIRSTRTQ+MLDQL DLQR+E +L EANKTLK+R  E  Q N
Sbjct: 121 LGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQAN 180

Query: 181 ALQL--NQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPS-MNNFL 240
             Q+    +   + YGRQ AQ   +AF+HPL+CEPTLQIGY  D IT+ TA  S +NN++
Sbjct: 181 QQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSD-ITMATATASTVNNYM 240

Query: 241 -PGWL 242
            PGWL
Sbjct: 241 PPGWL 242

[Close]

BLAST of Cp4.1LG17g10640 vs. TrEMBL
Match: V9PDT1_CUCME (Sepallata 3-like MADS-box protein OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.8e-129
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELE+LERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELENLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. TrEMBL
Match: A0A061EBY6_THECC (K-box region and MADS-box transcription factor family protein isoform 1 OS=Theobroma cacao GN=TCM_008703 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 3.8e-119
Identity = 221/242 (91.32%), Postives = 232/242 (95.87%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSM+KTLERYQKCNYGAPE NVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMIKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLD SLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDSSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           +LQLN +A+D+ YGRQ AQP  D FFHPL+CEPTLQIGYQPDPI+VV AGPS+NN++ GW
Sbjct: 181 SLQLNPNAEDVGYGRQPAQPQGDGFFHPLECEPTLQIGYQPDPISVVNAGPSVNNYMTGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. TrEMBL
Match: Q8LLR0_VITVI (MADS-box protein 4 OS=Vitis vinifera GN=MADS4 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-117
Identity = 219/242 (90.50%), Postives = 229/242 (94.63%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPE NVSTREALELSSQQEYLKLKARYEALQ SQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQLSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LS+KELESLERQLD+SLKQIRSTRTQYMLDQLTDLQRKEH+LNEANKTLKQRL+EG QVN
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
            LQ N +A D+ YGRQQAQP  D FFHPL+CEPTLQIGYQPDPITV  AGPS+NN++PGW
Sbjct: 181 QLQWNPNAQDVGYGRQQAQPQGDGFFHPLECEPTLQIGYQPDPITVAAAGPSVNNYMPGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. TrEMBL
Match: A0A061E496_THECC (K-box region and MADS-box transcription factor family protein isoform 3 OS=Theobroma cacao GN=TCM_008703 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.7e-117
Identity = 221/247 (89.47%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSM+KTLERYQKCNYGAPE NVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMIKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQR-----LIE 180
           LSSKELESLERQLD SLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQR     L+E
Sbjct: 121 LSSKELESLERQLDSSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRAGALQLVE 180

Query: 181 GYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNN 240
           GYQVN+LQLN +A+D+ YGRQ AQP  D FFHPL+CEPTLQIGYQPDPI+VV AGPS+NN
Sbjct: 181 GYQVNSLQLNPNAEDVGYGRQPAQPQGDGFFHPLECEPTLQIGYQPDPISVVNAGPSVNN 240

Query: 241 FLPGWLP 243
           ++ GWLP
Sbjct: 241 YMTGWLP 247

[Close]

BLAST of Cp4.1LG17g10640 vs. TrEMBL
Match: U3TBN4_9ROSI (Sepallata 3 OS=Shorea beccariana GN=SbSEP3 PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 6.1e-117
Identity = 217/242 (89.67%), Postives = 231/242 (95.45%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVS+REALELSSQQEYLKLKARYEALQRSQ+NLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSSREALELSSQQEYLKLKARYEALQRSQKNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLD SLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQV+
Sbjct: 121 LSSKELESLERQLDSSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVS 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ++ LN +A+D+ YGRQ  QP  DAFFHPL+CEPTLQIGY  DPI+VVTAGPS+NN++ GW
Sbjct: 181 SMHLNPNAEDVGYGRQPVQPQGDAFFHPLECEPTLQIGYPTDPISVVTAGPSVNNYMGGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR10
Match: AT1G24260.2 (AT1G24260.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 348.6 bits (893), Expect = 3.1e-96
Identity = 191/247 (77.33%), Postives = 211/247 (85.43%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELESLERQLD SLKQIR+ RTQ+MLDQL DLQ KE +L E NKTL+ RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNN 240
           +  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 240

Query: 241 FLPGWLP 243
           ++ GWLP
Sbjct: 241 YMLGWLP 245

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR10
Match: AT3G02310.1 (AT3G02310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 282.0 bits (720), Expect = 3.6e-76
Identity = 156/252 (61.90%), Postives = 186/252 (73.81%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           S+MLKTLERYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGEDLGP
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL-----IE 180
           L+SKELE LERQLD SLKQ+R  +TQYMLDQL+DLQ KEH+L +AN+ L  +L     + 
Sbjct: 121 LNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVR 180

Query: 181 GYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAGP 240
            + +          ++ YG  QA   S   +  L+C+PTLQIGY      + + V   G 
Sbjct: 181 HHHIGGGWEGGDQQNIAYGHPQAH--SQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQ 240

Query: 241 SM--NNFLPGWL 242
           S   N ++PGW+
Sbjct: 241 SQQGNGYIPGWM 249

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 275.0 bits (702), Expect = 4.4e-74
Identity = 158/264 (59.85%), Postives = 185/264 (70.08%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           S+MLKTL+RYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGEDLGP
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           L+SKELE LERQLD SLKQ+RS +TQYMLDQL+DLQ KE +L E N+ L  +L +   V 
Sbjct: 121 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVR 180

Query: 181 ALQLNQSA------DDMMYGRQQAQPPSDAFFHPLDCEPTLQIG---------------Y 240
           +  +           ++ Y   QAQ  S   + PL+C PTLQ+G                
Sbjct: 181 SHHMGGGGGWEGGEQNVTYAHHQAQ--SQGLYQPLECNPTLQMGCCFGDDDDDDRYDNPV 240

Query: 241 QPDPITVVTAGPSM--NNFLPGWL 242
             + IT  T   +   N ++PGW+
Sbjct: 241 CSEQITATTQAQAQQGNGYIPGWM 261

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR10
Match: AT2G03710.1 (AT2G03710.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 224.9 bits (572), Expect = 5.2e-59
Identity = 133/259 (51.35%), Postives = 172/259 (66.41%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFSNRGKLYEFCSS
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  -SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLG 120
            S M +T+++Y+K +Y   +PN S ++  +    Q+YLKLK+R E LQ SQR+LLGE+L 
Sbjct: 61  PSGMARTVDKYRKHSYATMDPNQSAKDLQD--KYQDYLKLKSRVEILQHSQRHLLGEELS 120

Query: 121 PLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEG--- 180
            +   ELE LERQ+D SL+QIRST+ + MLDQL+DL+ KE +L E N+ L+++L +    
Sbjct: 121 EMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAA 180

Query: 181 -----YQVNALQLNQSADDMMYGRQ--QAQPP--SDAFFHPLDCEPTLQIG--YQPDPIT 240
                +  +A +  Q       G    Q+ PP     FF PL     LQ+   Y  +P  
Sbjct: 181 LTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQMSSHYNHNPAN 240

Query: 241 V---VTAGPSMNNFLPGWL 242
                T   ++N F PGW+
Sbjct: 241 ATNSATTSQNVNGFFPGWM 257

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR10
Match: AT2G45650.1 (AT2G45650.1 AGAMOUS-like 6)

HSP 1 Score: 194.1 bits (492), Expect = 9.8e-50
Identity = 127/255 (49.80%), Postives = 161/255 (63.14%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
             +  T+ERY +C Y     N    E  + S  QE  KLK++YE+L R+ RNLLGEDLG 
Sbjct: 61  VGIESTIERYNRC-YNCSLSNNKPEETTQ-SWCQEVTKLKSKYESLVRTNRNLLGEDLGE 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL-IEGYQV 180
           +  KEL++LERQL+ +L   R  +TQ M++++ DL++KE  L + NK LK +   EG+  
Sbjct: 121 MGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAF 180

Query: 181 NALQ---LNQSADDMMYGRQQAQPPSDAFFHPLDC--EPTLQIGYQPDPITVVTAGPSMN 240
              Q    N +A           P   +  + LDC  EP LQIG+Q     V   G S++
Sbjct: 181 KTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQ-QHYYVQGEGSSVS 240

Query: 241 --------NFLPGWL 242
                   NF+ GW+
Sbjct: 241 KSNVAGETNFVQGWV 251

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: gi|449445548|ref|XP_004140534.1| (PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: gi|661902921|ref|NP_001284431.1| (MADS-box protein 5 [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 2.6e-129
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELE+LERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELENLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: gi|590692030|ref|XP_007043947.1| (K-box region and MADS-box transcription factor family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 435.6 bits (1119), Expect = 5.5e-119
Identity = 221/242 (91.32%), Postives = 232/242 (95.87%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSM+KTLERYQKCNYGAPE NVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMIKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLD SLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDSSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           +LQLN +A+D+ YGRQ AQP  D FFHPL+CEPTLQIGYQPDPI+VV AGPS+NN++ GW
Sbjct: 181 SLQLNPNAEDVGYGRQPAQPQGDGFFHPLECEPTLQIGYQPDPISVVNAGPSVNNYMTGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: gi|778711878|ref|XP_011656808.1| (PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 7.2e-119
Identity = 226/242 (93.39%), Postives = 227/242 (93.80%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRK              L+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRK--------------LVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 228

Query: 241 LP 243
           LP
Sbjct: 241 LP 228

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: gi|802724393|ref|XP_012085713.1| (PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X4 [Jatropha curcas])

HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-118
Identity = 222/243 (91.36%), Postives = 232/243 (95.47%), Query Frame = 1


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL-ELSSQQEYLKLKARYEALQRSQRNLLGEDLG 120
           SSMLKTLERYQKCNYGAPE NVSTREAL ELSSQQEYLKLKARYEALQRSQRNLLGEDLG
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALQELSSQQEYLKLKARYEALQRSQRNLLGEDLG 120

Query: 121 PLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQV 180
           PLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEH+LNEANKTLKQRL+EGY V
Sbjct: 121 PLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLVEGYHV 180

Query: 181 NALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPG 240
           N +QLN  A+D+ +GRQ AQP  D FFHPL+CEPTLQIGYQPDPITVVTAGPS+NN++PG
Sbjct: 181 NTMQLNLGAEDVGFGRQAAQPQGDGFFHPLECEPTLQIGYQPDPITVVTAGPSVNNYMPG 240

Query: 241 WLP 243
           WLP
Sbjct: 241 WLP 243

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL9_PETHY	5.5e-111	86.36	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2	[more]
MTF1_PEA	2.1e-102	80.65	MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1	[more]
SEP3_ARATH	5.5e-95	77.33	Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1	[more]
AGL9_SINAL	1.6e-94	75.90	Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1	[more]
AGL9_ARADE	7.2e-87	73.06	Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1	[more]

BLAST of Cp4.1LG17g10640 vs. TrEMBL


Match Name	E-value	Identity	Description
V9PDT1_CUCME	1.8e-129	98.76	Sepallata 3-like MADS-box protein OS=Cucumis melo PE=2 SV=1	[more]
A0A061EBY6_THECC	3.8e-119	91.32	K-box region and MADS-box transcription factor family protein isoform 1 OS=Theob...	[more]
Q8LLR0_VITVI	1.6e-117	90.50	MADS-box protein 4 OS=Vitis vinifera GN=MADS4 PE=2 SV=1	[more]
A0A061E496_THECC	2.7e-117	89.47	K-box region and MADS-box transcription factor family protein isoform 3 OS=Theob...	[more]
U3TBN4_9ROSI	6.1e-117	89.67	Sepallata 3 OS=Shorea beccariana GN=SbSEP3 PE=2 SV=1	[more]

BLAST of Cp4.1LG17g10640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24260.2	3.1e-96	77.33	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	3.6e-76	61.90	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	4.4e-74	59.85	K-box region and MADS-box transcription factor family protein	[more]
AT2G03710.1	5.2e-59	51.35	K-box region and MADS-box transcription factor family protein	[more]
AT2G45650.1	9.8e-50	49.80	AGAMOUS-like 6	[more]

BLAST of Cp4.1LG17g10640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445548\|ref\|XP_004140534.1\|	1.2e-129	99.17	PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucumis sativu...	[more]
gi\|661902921\|ref\|NP_001284431.1\|	2.6e-129	98.76	MADS-box protein 5 [Cucumis melo]	[more]
gi\|590692030\|ref\|XP_007043947.1\|	5.5e-119	91.32	K-box region and MADS-box transcription factor family protein isoform 1 [Theobro...	[more]
gi\|778711878\|ref\|XP_011656808.1\|	7.2e-119	93.39	PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucumis sativu...	[more]
gi\|802724393\|ref\|XP_012085713.1\|	1.2e-118	91.36	PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X4 [Jatropha curca...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001708	cell fate specification
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010093	specification of floral organ identity
biological_process	GO:0048833	specification of floral organ number
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10640.1	Cp4.1LG17g10640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 8.6E-33coord: 23..38 score: 8.6E-33coord: 38..59 score: 8.6
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 2.2
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 1.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 33
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..76 score: 1.01
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 91..173 score: 6.5
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 89..185 score: 15
None	No IPR available	unknown	Coil	Coil	coord: 126..146 score: -coord: 152..172 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..241 score: 9.2E
None	No IPR available	PANTHER	PTHR11945:SF196	SUBFAMILY NOT NAMED	coord: 2..241 score: 9.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g10640	Cucsa.349640	Cucumber (Gy14) v1	cgycpeB0909
Cp4.1LG17g10640	CmaCh17G014380	Cucurbita maxima (Rimu)	cmacpeB387
Cp4.1LG17g10640	CmaCh08G001720	Cucurbita maxima (Rimu)	cmacpeB914
Cp4.1LG17g10640	CmoCh17G013770	Cucurbita moschata (Rifu)	cmocpeB347
Cp4.1LG17g10640	CmoCh08G001750	Cucurbita moschata (Rifu)	cmocpeB851
Cp4.1LG17g10640	Csa6G095270	Cucumber (Chinese Long) v2	cpecuB319
Cp4.1LG17g10640	MELO3C022315	Melon (DHL92) v3.5.1	cpemeB291
Cp4.1LG17g10640	ClCG06G002130	Watermelon (Charleston Gray)	cpewcgB296
Cp4.1LG17g10640	CSPI06G07820	Wild cucumber (PI 183967)	cpecpiB320
Cp4.1LG17g10640	Lsi09G017270	Bottle gourd (USVL1VR-Ls)	cpelsiB256
Cp4.1LG17g10640	MELO3C022316.2	Melon (DHL92) v3.6.1	cpemedB339
Cp4.1LG17g10640	CsaV3_6G008200	Cucumber (Chinese Long) v3	cpecucB0398
Cp4.1LG17g10640	Bhi12G002178	Wax gourd	cpewgoB0380
Cp4.1LG17g10640	CsGy6G007880	Cucumber (Gy14) v2	cgybcpeB779
Cp4.1LG17g10640	Carg05000	Silver-seed gourd	carcpeB0125
Cp4.1LG17g10640	Carg11597	Silver-seed gourd	carcpeB0021

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g10640	Cp4.1LG01g11900	Cucurbita pepo (Zucchini)	cpecpeB331

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g10640	Watermelon (97103) v1	cpewmB339
Cp4.1LG17g10640	Watermelon (97103) v1	cpewmB344
Cp4.1LG17g10640	Melon (DHL92) v3.5.1	cpemeB288
Cp4.1LG17g10640	Melon (DHL92) v3.5.1	cpemeB287
Cp4.1LG17g10640	Cucumber (Gy14) v2	cgybcpeB788
Cp4.1LG17g10640	Melon (DHL92) v3.6.1	cpemedB335
Cp4.1LG17g10640	Melon (DHL92) v3.6.1	cpemedB336
Cp4.1LG17g10640	Cucumber (Chinese Long) v3	cpecucB0408
Cp4.1LG17g10640	Cucumber (Gy14) v1	cgycpeB0912
Cp4.1LG17g10640	Wild cucumber (PI 183967)	cpecpiB332
Cp4.1LG17g10640	Wild cucumber (PI 183967)	cpecpiB328
Cp4.1LG17g10640	Cucumber (Chinese Long) v2	cpecuB327
Cp4.1LG17g10640	Cucumber (Chinese Long) v2	cpecuB331
Cp4.1LG17g10640	Bottle gourd (USVL1VR-Ls)	cpelsiB251
Cp4.1LG17g10640	Bottle gourd (USVL1VR-Ls)	cpelsiB253
Cp4.1LG17g10640	Watermelon (Charleston Gray)	cpewcgB302