Cp4.1LG17g09310 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g09310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Glutaredoxin
Location	Cp4.1LG17 : 7164865 .. 7165245 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCATTACCAGGCAGAGCGTTCATGGGAATACTACATGCCGCCCACTGCAGCCAGAGACCCAGTGGACCGTGTACTCCGGCTTGCGGCAGAGAGCGCGGTGGTGATATTCAGCGTCAGCAGCTGCTGCATGTGCCACGCCCTCAAGCGCCTGCTATGCGGTATGGGAGTGAGCCCAACCGTGTACGAGCTCGACCACGACCCCAGAGGAAAAGAAATTGAGAGGGCTTTGATGAGGCTCGTCGGACCCACCGCACCGCCGGTGCCGGTCGTATTTATTGGCGGAAAGCTGGTGGGCTCTATGGACAGAGTTATGGCTTCTCACATCAATGGAACTTTGGTCCCTCTTCTCAAGGAAGCCGGGGCCTTATGGCTTTAG

mRNA sequence

ATGATGCATTACCAGGCAGAGCGTTCATGGGAATACTACATGCCGCCCACTGCAGCCAGAGACCCAGTGGACCGTGTACTCCGGCTTGCGGCAGAGAGCGCGGTGGTGATATTCAGCGTCAGCAGCTGCTGCATGTGCCACGCCCTCAAGCGCCTGCTATGCGGTATGGGAGTGAGCCCAACCGTGTACGAGCTCGACCACGACCCCAGAGGAAAAGAAATTGAGAGGGCTTTGATGAGGCTCGTCGGACCCACCGCACCGCCGGTGCCGGTCGTATTTATTGGCGGAAAGCTGGTGGGCTCTATGGACAGAGTTATGGCTTCTCACATCAATGGAACTTTGGTCCCTCTTCTCAAGGAAGCCGGGGCCTTATGGCTTTAG

Coding sequence (CDS)

ATGATGCATTACCAGGCAGAGCGTTCATGGGAATACTACATGCCGCCCACTGCAGCCAGAGACCCAGTGGACCGTGTACTCCGGCTTGCGGCAGAGAGCGCGGTGGTGATATTCAGCGTCAGCAGCTGCTGCATGTGCCACGCCCTCAAGCGCCTGCTATGCGGTATGGGAGTGAGCCCAACCGTGTACGAGCTCGACCACGACCCCAGAGGAAAAGAAATTGAGAGGGCTTTGATGAGGCTCGTCGGACCCACCGCACCGCCGGTGCCGGTCGTATTTATTGGCGGAAAGCTGGTGGGCTCTATGGACAGAGTTATGGCTTCTCACATCAATGGAACTTTGGTCCCTCTTCTCAAGGAAGCCGGGGCCTTATGGCTTTAG

Protein sequence

MMHYQAERSWEYYMPPTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL

Homology

[Close]

BLAST of Cp4.1LG17g09310 vs. Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.4e-43
Identity = 94/135 (69.63%), Postives = 105/135 (77.78%), Query Frame = 1


Query: 2   MHYQAERSWEYYMPPTAARDPVD----RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMG 61
           M Y A     +YMP  A    V+    RV RLA+ESAVV+FSVSSCCMCHA+KRL CGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 62  VSPTVYELDHDPRGKEIERALMRLV---GPTA---PPVPVVFIGGKLVGSMDRVMASHIN 121
           V PTV+ELD DPRG+E+ERAL RLV   GP A   P VPVVFIGGKLVG+MDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 122 GTLVPLLKEAGALWL 127
           G+LVPLLKEAGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of Cp4.1LG17g09310 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 4.8e-42
Identity = 90/130 (69.23%), Postives = 103/130 (79.23%), Query Frame = 1


Query: 6   AERSWEYYMPPTA------ARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVS 65
           AE++W  YMP  A      A    +RV RLA+ESAVV+FSVSSCCMCHA+KRL CGMGV 
Sbjct: 8   AEQAW--YMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVH 67

Query: 66  PTVYELDHDPRGKEIERALMRLV---GPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVP 125
           P V+ELD DPRG+++ERAL RLV   G  A  VPVVFIGGKLVG+MDRVMA+HING+LVP
Sbjct: 68  PAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVP 127

Query: 126 LLKEAGALWL 127
           LLKEAGALWL
Sbjct: 128 LLKEAGALWL 135

[Close]

BLAST of Cp4.1LG17g09310 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-34
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +DRV RLAA+ AVVIFS+SSCCMCH + RL C +GV+PTV ELD DPRGKE+E+AL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 83  GPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
           G  +P VP VFIGG+LVGS D+VM+ H++G LVPLL+ AGALW+
Sbjct: 61  G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Cp4.1LG17g09310 vs. Swiss-Prot
Match: GRC14_ORYSJ (Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-34
Identity = 66/104 (63.46%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +DRV++LA+E AVVIF++SSCCMCH + RL C +GV+  V+ELD DPRGKE+ERAL++L+
Sbjct: 1   MDRVMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQDPRGKEMERALLKLL 60

Query: 83  GPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
           G   PPVPVVFIGGKLVG  +++M+ H+ G L+P+LK AGALWL
Sbjct: 61  G-RGPPVPVVFIGGKLVGGTNKIMSLHLGGELIPMLKNAGALWL 103

[Close]

BLAST of Cp4.1LG17g09310 vs. Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-34
Identity = 82/137 (59.85%), Postives = 98/137 (71.53%), Query Frame = 1


Query: 2   MHYQAERSWEYYMPPT--------AARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLL 61
           M YQ E SW  Y   +         A   + R+  LA+ESAVVIFSVS+CCMCHA+K L 
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 62  CGMGVSPTVYELDHDPRGKEIERALMRLVG----PTAPPVPVVFIGGKLVGSMDRVMASH 121
            GMGVSP V+ELD  P G +I+RAL+RL+G     +   +PVVFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 122 INGTLVPLLKEAGALWL 127
           ING+LVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Cp4.1LG17g09310 vs. TrEMBL
Match: U3RGD6_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX7 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.5e-62
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 1


Query: 1   MMHYQAERSWEYYMPPT--AARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSWEYYMP T  A+RDPVDRV+RLAAESAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           SPTVYELDHDPRGK+IERALMRLVG T+PPVPVVFIGGKLVGSMDRVMASHINGTLVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of Cp4.1LG17g09310 vs. TrEMBL
Match: M5XSA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021177mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-48
Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = 1


Query: 2   MHYQ-AERSWEYYMPPTAAR-DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVS 61
           MHYQ AE SW YY+P   +  DP++RV RLAA+SAVVIFSVSSCCMCHA+KRL CGMGV+
Sbjct: 1   MHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGVN 60

Query: 62  PTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLK 121
           PTVYELD DPRGKEIERALMRL+G  +P VPVVFIGGKL+G+MDRVMASHING+LVPLLK
Sbjct: 61  PTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLLK 120

Query: 122 EAGALWL 127
           EAGALWL
Sbjct: 121 EAGALWL 126

[Close]

BLAST of Cp4.1LG17g09310 vs. TrEMBL
Match: W9QWA6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017485 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-48
Identity = 103/130 (79.23%), Postives = 112/130 (86.15%), Query Frame = 1


Query: 2   MHYQAERSWEYYMPPTAAR-----DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGM 61
           M YQA  SW YY+P  AAR     DP++RV RLAAESAVV+FSVSSCCMCHA+KRL CGM
Sbjct: 1   MQYQAADSWGYYVP--AARCMGGGDPLERVARLAAESAVVVFSVSSCCMCHAVKRLFCGM 60

Query: 62  GVSPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVP 121
           GV+PTVYELDHDPRGKEIERALMRL+G T   VPVVFIGGKLVG+MD VMASHING+LVP
Sbjct: 61  GVNPTVYELDHDPRGKEIERALMRLLG-TPNAVPVVFIGGKLVGAMDHVMASHINGSLVP 120

Query: 122 LLKEAGALWL 127
           LLKEAGALWL
Sbjct: 121 LLKEAGALWL 127

[Close]

BLAST of Cp4.1LG17g09310 vs. TrEMBL
Match: B9RM97_RICCO (Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_1078780 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-47
Identity = 100/129 (77.52%), Postives = 111/129 (86.05%), Query Frame = 1


Query: 2   MHYQAERSWE---YYMPPTA-ARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMG 61
           M YQAE SW    YYM P     DP++RV+RLA+ESAVVIFS+SSCCMCHA+KRL CGMG
Sbjct: 1   MQYQAE-SWSSNGYYMVPLMMGTDPIERVVRLASESAVVIFSISSCCMCHAVKRLFCGMG 60

Query: 62  VSPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPL 121
           V+PTVYELD DPRGKEIERALMRL+G  +  VPVVFIGGKL+G+MDRVMASHINGTLVPL
Sbjct: 61  VNPTVYELDQDPRGKEIERALMRLLGNYSSVVPVVFIGGKLIGAMDRVMASHINGTLVPL 120

Query: 122 LKEAGALWL 127
           LKEAGALWL
Sbjct: 121 LKEAGALWL 128

[Close]

BLAST of Cp4.1LG17g09310 vs. TrEMBL
Match: A0A0D2RIC2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G195000 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-47
Identity = 94/126 (74.60%), Postives = 110/126 (87.30%), Query Frame = 1


Query: 2   MHYQAERSWEYYMPPTA-ARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSP 61
           MHYQ +  W YYMP  +   DP++RV++LA+E AVVIFS+SSCCMCHA+KRL CGMGV+P
Sbjct: 1   MHYQGDYYWGYYMPTRSIGSDPMERVVKLASEKAVVIFSLSSCCMCHAVKRLFCGMGVNP 60

Query: 62  TVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKE 121
           TVYELD DPRGK++E ALMRL+G  + PVPVVFIGGKL+G+MDRVMASHINGTLVPLLKE
Sbjct: 61  TVYELDQDPRGKDLETALMRLLG-NSQPVPVVFIGGKLIGAMDRVMASHINGTLVPLLKE 120

Query: 122 AGALWL 127
           AGALWL
Sbjct: 121 AGALWL 125

[Close]

BLAST of Cp4.1LG17g09310 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 2.7e-35
Identity = 82/137 (59.85%), Postives = 98/137 (71.53%), Query Frame = 1


Query: 2   MHYQAERSWEYYMPPT--------AARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLL 61
           M YQ E SW  Y   +         A   + R+  LA+ESAVVIFSVS+CCMCHA+K L 
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 62  CGMGVSPTVYELDHDPRGKEIERALMRLVG----PTAPPVPVVFIGGKLVGSMDRVMASH 121
            GMGVSP V+ELD  P G +I+RAL+RL+G     +   +PVVFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 122 INGTLVPLLKEAGALWL 127
           ING+LVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Cp4.1LG17g09310 vs. TAIR10
Match: AT5G14070.1 (AT5G14070.1 Thioredoxin superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 7.9e-35
Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 1


Query: 25  RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV-- 84
           ++  +AAE+AVVIFSVS+CCMCHA+KRL  GMGVSP V+ELD  P G EI RAL+RL+  
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 85  ---GPTAP-PVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              G T+P  +PVVFIGGK+VG+M+RVMASHING+LVPLLK+AGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Cp4.1LG17g09310 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 5.5e-28
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +D + ++  E  VVI+S SSCCM H +K LLC  G +P VYELD   RG+EIE+AL+RL 
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL- 60

Query: 83  GPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              +P VP VFIGG+LVG  + VM+ H+NG+L+P+LK AGALW+
Sbjct: 61  -GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Cp4.1LG17g09310 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 3.6e-27
Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +D++ ++ +E +VVIFS +SCCM H +K L    GV+PT+YELD   RGKEIE+AL +L 
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 83  GPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              +P VPVVFIGG+LVG  ++VM+ H+N +LVP+LK  GALWL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Cp4.1LG17g09310 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 3.6e-27
Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           ++ + ++ +E +VVIFS +SCCM H +K L   +GV+PT+YELD   RGKEIE AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 83  GPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              +P VPVVFIGG+LVG  ++VM+ H+N +LVP+LK AGALWL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Cp4.1LG17g09310 vs. NCBI nr
Match: gi|821595495|ref|NP_001295802.1| (glutaredoxin-C1-like [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 9.3e-62
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 1


Query: 1   MMHYQAERSWEYYMPPT--AARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSWEYYMP T  A+RDPVDRV+RLAAESAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           SPTVYELDHDPRGK+IERALMRLVG T+PPVPVVFIGGKLVGSMDRVMASHINGTLVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of Cp4.1LG17g09310 vs. NCBI nr
Match: gi|659119876|ref|XP_008459889.1| (PREDICTED: glutaredoxin-C1-like [Cucumis melo])

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61
Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 1


Query: 1   MMHYQAERSWEYYMP--PTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSWEYYMP   +A+RDPVDRV+RLAAESAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVSASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           SPTVYELDHDPRGK+IERALMRLVG T+PPVPVVFIGGKLVGSMDRVMASHINGTLVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of Cp4.1LG17g09310 vs. NCBI nr
Match: gi|645231058|ref|XP_008222218.1| (PREDICTED: glutaredoxin-C1-like [Prunus mume])

HSP 1 Score: 202.6 bits (514), Expect = 4.1e-49
Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 1


Query: 1   MMHYQ-AERSWEYYMPPTAAR-DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQ AE SW YY+P   +  DP++RV RLAA+SAVVIFSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MMHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           +PTVYELD DPRGKEIERALMRL+G  +P VPVVFIGGKL+G+MDRVMASHING+LVPLL
Sbjct: 61  NPTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

[Close]

BLAST of Cp4.1LG17g09310 vs. NCBI nr
Match: gi|596299169|ref|XP_007227610.1| (hypothetical protein PRUPE_ppa021177mg [Prunus persica])

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48
Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = 1


Query: 2   MHYQ-AERSWEYYMPPTAAR-DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVS 61
           MHYQ AE SW YY+P   +  DP++RV RLAA+SAVVIFSVSSCCMCHA+KRL CGMGV+
Sbjct: 1   MHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGVN 60

Query: 62  PTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLK 121
           PTVYELD DPRGKEIERALMRL+G  +P VPVVFIGGKL+G+MDRVMASHING+LVPLLK
Sbjct: 61  PTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLLK 120

Query: 122 EAGALWL 127
           EAGALWL
Sbjct: 121 EAGALWL 126

[Close]

BLAST of Cp4.1LG17g09310 vs. NCBI nr
Match: gi|1009129414|ref|XP_015881752.1| (PREDICTED: glutaredoxin-C1-like [Ziziphus jujuba])

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 1


Query: 2   MHYQ-AERSWEYYMPPTAAR--DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 61
           MHYQ +  SW YY+P       DP++RV+RLA+ESAVVIFSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MHYQQSSESWGYYVPTVRCMGSDPLERVVRLASESAVVIFSVSSCCMCHAVKRLFCGMGV 60

Query: 62  SPTVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 121
           +PTVYELD DPRGKEIERALMRL+G  +P VPVVFIGGKL+G+MDRVMASHINGTLVPLL
Sbjct: 61  NPTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGAMDRVMASHINGTLVPLL 120

Query: 122 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC3_ORYSJ	4.4e-43	69.63	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1	[more]
GRXC5_ORYSJ	4.8e-42	69.23	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2	[more]
GRXC1_ORYSJ	1.3e-34	67.31	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	[more]
GRC14_ORYSJ	2.8e-34	63.46	Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2	[more]
GRXC7_ARATH	4.8e-34	59.85	Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2	[more]

BLAST of Cp4.1LG17g09310 vs. TrEMBL


Match Name	E-value	Identity	Description
U3RGD6_CUCSA	6.5e-62	93.75	Glutaredoxin OS=Cucumis sativus GN=GRX7 PE=2 SV=1	[more]
M5XSA7_PRUPE	1.1e-48	79.53	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021177mg PE=4 SV=1	[more]
W9QWA6_9ROSA	1.8e-48	79.23	Uncharacterized protein OS=Morus notabilis GN=L484_017485 PE=4 SV=1	[more]
B9RM97_RICCO	1.2e-47	77.52	Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_1078780 PE=4 SV=1	[more]
A0A0D2RIC2_GOSRA	1.6e-47	74.60	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G195000 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g09310 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02000.1	2.7e-35	59.85	Thioredoxin superfamily protein	[more]
AT5G14070.1	7.9e-35	68.52	Thioredoxin superfamily protein	[more]
AT5G18600.1	5.5e-28	54.81	Thioredoxin superfamily protein	[more]
AT4G15680.1	3.6e-27	54.81	Thioredoxin superfamily protein	[more]
AT4G15700.1	3.6e-27	54.81	Thioredoxin superfamily protein	[more]

BLAST of Cp4.1LG17g09310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|821595495\|ref\|NP_001295802.1\|	9.3e-62	93.75	glutaredoxin-C1-like [Cucumis sativus]	[more]
gi\|659119876\|ref\|XP_008459889.1\|	2.1e-61	92.97	PREDICTED: glutaredoxin-C1-like [Cucumis melo]	[more]
gi\|645231058\|ref\|XP_008222218.1\|	4.1e-49	79.69	PREDICTED: glutaredoxin-C1-like [Prunus mume]	[more]
gi\|596299169\|ref\|XP_007227610.1\|	1.5e-48	79.53	hypothetical protein PRUPE_ppa021177mg [Prunus persica]	[more]
gi\|1009129414\|ref\|XP_015881752.1\|	1.5e-48	78.13	PREDICTED: glutaredoxin-C1-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR011905	GlrX-like_pln_2
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g09310.1	Cp4.1LG17g09310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 35..99 score: 1.6
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 23..125 score: 21
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 27..126 score: 2.3
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 24..125 score: 3.3
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 23..125 score: 2.05
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..126 score: 2.4
None	No IPR available	PANTHER	PTHR10168:SF62	GLUTAREDOXIN-C7-RELATED	coord: 1..126 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g09310	Cucsa.349400	Cucumber (Gy14) v1	cgycpeB0911
Cp4.1LG17g09310	CmaCh17G014240	Cucurbita maxima (Rimu)	cmacpeB389
Cp4.1LG17g09310	CmaCh08G000090	Cucurbita maxima (Rimu)	cmacpeB914
Cp4.1LG17g09310	CmoCh17G013680	Cucurbita moschata (Rifu)	cmocpeB352
Cp4.1LG17g09310	Cla001498	Watermelon (97103) v1	cpewmB341
Cp4.1LG17g09310	Csa6G092540	Cucumber (Chinese Long) v2	cpecuB322
Cp4.1LG17g09310	MELO3C022339	Melon (DHL92) v3.5.1	cpemeB284
Cp4.1LG17g09310	ClCG06G001900	Watermelon (Charleston Gray)	cpewcgB298
Cp4.1LG17g09310	CSPI06G07560	Wild cucumber (PI 183967)	cpecpiB323
Cp4.1LG17g09310	Lsi09G017510	Bottle gourd (USVL1VR-Ls)	cpelsiB249
Cp4.1LG17g09310	MELO3C022339.2	Melon (DHL92) v3.6.1	cpemedB332
Cp4.1LG17g09310	CsaV3_6G007950	Cucumber (Chinese Long) v3	cpecucB0403
Cp4.1LG17g09310	Bhi12G002146	Wax gourd	cpewgoB0389
Cp4.1LG17g09310	CsGy6G007620	Cucumber (Gy14) v2	cgybcpeB783

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g09310	Cp4.1LG12g09960	Cucurbita pepo (Zucchini)	cpecpeB170

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g09310	Silver-seed gourd	carcpeB0022
Cp4.1LG17g09310	Silver-seed gourd	carcpeB1359
Cp4.1LG17g09310	Cucurbita moschata (Rifu)	cmocpeB851