CmoCh17G013680 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G013680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Glutaredoxin
Location	Cmo_Chr17 : 10623443 .. 10623823 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCATTACCAGGCAGAGCGCTCATGGGACTACTACATGCCGGCGACGGCAGCGAGAGACCCAGTGGACCGGGTGGTCCGGCTGGCGGCGGGGAGCGCAGTGGTGATATTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCCTGAAGCGGCTGCTGTGCGGAATGGGAGTGAGCTCAACGGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTGATGAGGCTCGTCGGAGCCGCCTCGCCGCCGGTGCCCGTCGTCTTTATTGGCGGGAAGCTGGTGGGGTCCATGGACAGAGTTATGGCTTCTCATATCAATGGCAGTTTGGTCCCTCTTCTCAAGGAAGCTGGGGCCTTGTGGCTTTAG

mRNA sequence

ATGATGCATTACCAGGCAGAGCGCTCATGGGACTACTACATGCCGGCGACGGCAGCGAGAGACCCAGTGGACCGGGTGGTCCGGCTGGCGGCGGGGAGCGCAGTGGTGATATTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCCTGAAGCGGCTGCTGTGCGGAATGGGAGTGAGCTCAACGGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTGATGAGGCTCGTCGGAGCCGCCTCGCCGCCGGTGCCCGTCGTCTTTATTGGCGGGAAGCTGGTGGGGTCCATGGACAGAGTTATGGCTTCTCATATCAATGGCAGTTTGGTCCCTCTTCTCAAGGAAGCTGGGGCCTTGTGGCTTTAG

Coding sequence (CDS)

ATGATGCATTACCAGGCAGAGCGCTCATGGGACTACTACATGCCGGCGACGGCAGCGAGAGACCCAGTGGACCGGGTGGTCCGGCTGGCGGCGGGGAGCGCAGTGGTGATATTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCCTGAAGCGGCTGCTGTGCGGAATGGGAGTGAGCTCAACGGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTGATGAGGCTCGTCGGAGCCGCCTCGCCGCCGGTGCCCGTCGTCTTTATTGGCGGGAAGCTGGTGGGGTCCATGGACAGAGTTATGGCTTCTCATATCAATGGCAGTTTGGTCCCTCTTCTCAAGGAAGCTGGGGCCTTGTGGCTTTAG

Homology

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BLAST of CmoCh17G013680 vs. Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.6e-43
Identity = 96/135 (71.11%), Postives = 106/135 (78.52%), Query Frame = 1


Query: 2   MHYQAERSWDYYMPATAARDPVD----RVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMG 61
           M Y A     +YMPA A    V+    RV RLA+ SAVV+FSVSSCCMCHA+KRL CGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 62  VSSTVYELDHDPRGKEIERALMRLVG-----AASPP-VPVVFIGGKLVGSMDRVMASHIN 121
           V  TV+ELD DPRG+E+ERAL RLVG     AASPP VPVVFIGGKLVG+MDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 122 GSLVPLLKEAGALWL 127
           GSLVPLLKEAGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

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BLAST of CmoCh17G013680 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 8.2e-42
Identity = 91/130 (70.00%), Postives = 104/130 (80.00%), Query Frame = 1


Query: 6   AERSWDYYMPATA------ARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVS 65
           AE++W  YMPA A      A    +RV RLA+ SAVV+FSVSSCCMCHA+KRL CGMGV 
Sbjct: 8   AEQAW--YMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVH 67

Query: 66  STVYELDHDPRGKEIERALMRLV---GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVP 125
             V+ELD DPRG+++ERAL RLV   GAA+  VPVVFIGGKLVG+MDRVMA+HINGSLVP
Sbjct: 68  PAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVP 127

Query: 126 LLKEAGALWL 127
           LLKEAGALWL
Sbjct: 128 LLKEAGALWL 135

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BLAST of CmoCh17G013680 vs. Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-33
Identity = 83/137 (60.58%), Postives = 100/137 (72.99%), Query Frame = 1


Query: 2   MHYQAERSWDYYMPAT--------AARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLL 61
           M YQ E SW  Y  ++         A   + R+  LA+ SAVVIFSVS+CCMCHA+K L 
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 62  CGMGVSSTVYELDHDPRGKEIERALMRLV---GAASP-PVPVVFIGGKLVGSMDRVMASH 121
            GMGVS  V+ELD  P G +I+RAL+RL+   G++SP  +PVVFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 122 INGSLVPLLKEAGALWL 127
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

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BLAST of CmoCh17G013680 vs. Swiss-Prot
Match: GRC14_ORYSJ (Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33
Identity = 65/104 (62.50%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +DRV++LA+  AVVIF++SSCCMCH + RL C +GV++ V+ELD DPRGKE+ERAL++L+
Sbjct: 1   MDRVMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQDPRGKEMERALLKLL 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
           G   PPVPVVFIGGKLVG  +++M+ H+ G L+P+LK AGALWL
Sbjct: 61  G-RGPPVPVVFIGGKLVGGTNKIMSLHLGGELIPMLKNAGALWL 103

[Close]

BLAST of CmoCh17G013680 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33
Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 1


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +DRV RLAA  AVVIFS+SSCCMCH + RL C +GV+ TV ELD DPRGKE+E+AL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
           G  SP VP VFIGG+LVGS D+VM+ H++G+LVPLL+ AGALW+
Sbjct: 61  G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

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BLAST of CmoCh17G013680 vs. TrEMBL
Match: U3RGD6_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX7 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-60
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 1


Query: 1   MMHYQAERSWDYYMP--ATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSW+YYMP  A+A+RDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           S TVYELDHDPRGK+IERALMRLVGA SPPVPVVFIGGKLVGSMDRVMASHING+LVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

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BLAST of CmoCh17G013680 vs. TrEMBL
Match: M5XSA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021177mg PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.1e-48
Identity = 102/127 (80.31%), Postives = 111/127 (87.40%), Query Frame = 1


Query: 2   MHYQ-AERSWDYYMPATAAR-DPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVS 61
           MHYQ AE SW YY+P   +  DP++RV RLAA SAVVIFSVSSCCMCHA+KRL CGMGV+
Sbjct: 1   MHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGVN 60

Query: 62  STVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLK 121
            TVYELD DPRGKEIERALMRL+G  SP VPVVFIGGKL+G+MDRVMASHINGSLVPLLK
Sbjct: 61  PTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLLK 120

Query: 122 EAGALWL 127
           EAGALWL
Sbjct: 121 EAGALWL 126

[Close]

BLAST of CmoCh17G013680 vs. TrEMBL
Match: W9QWA6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017485 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-47
Identity = 99/128 (77.34%), Postives = 108/128 (84.38%), Query Frame = 1


Query: 2   MHYQAERSWDYYMPATAAR---DPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 61
           M YQA  SW YY+PA       DP++RV RLAA SAVV+FSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MQYQAADSWGYYVPAARCMGGGDPLERVARLAAESAVVVFSVSSCCMCHAVKRLFCGMGV 60

Query: 62  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 121
           + TVYELDHDPRGKEIERALMRL+G  +  VPVVFIGGKLVG+MD VMASHINGSLVPLL
Sbjct: 61  NPTVYELDHDPRGKEIERALMRLLGTPN-AVPVVFIGGKLVGAMDHVMASHINGSLVPLL 120

Query: 122 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

[Close]

BLAST of CmoCh17G013680 vs. TrEMBL
Match: B9GMP6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13440g PE=4 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.8e-46
Identity = 94/128 (73.44%), Postives = 113/128 (88.28%), Query Frame = 1


Query: 1   MMHYQAERSWDYYMP--ATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           M ++QAE SW YY+P   +   DP+++V RLA+GSAVV+FS+SSCCMCHA+KRL CGMGV
Sbjct: 1   MQYHQAE-SWGYYVPMRTSMVSDPLEKVARLASGSAVVVFSISSCCMCHAVKRLFCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           + TVYELDHDPRGKEIE+ALMRL+G +S  VPVVFIGGKL+G+MDRVMASHI+G+LVPLL
Sbjct: 61  NPTVYELDHDPRGKEIEKALMRLLG-SSTSVPVVFIGGKLIGAMDRVMASHISGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 126

[Close]

BLAST of CmoCh17G013680 vs. TrEMBL
Match: B9RM97_RICCO (Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_1078780 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.8e-46
Identity = 99/129 (76.74%), Postives = 109/129 (84.50%), Query Frame = 1


Query: 2   MHYQAERSWD---YYM-PATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMG 61
           M YQAE SW    YYM P     DP++RVVRLA+ SAVVIFS+SSCCMCHA+KRL CGMG
Sbjct: 1   MQYQAE-SWSSNGYYMVPLMMGTDPIERVVRLASESAVVIFSISSCCMCHAVKRLFCGMG 60

Query: 62  VSSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPL 121
           V+ TVYELD DPRGKEIERALMRL+G  S  VPVVFIGGKL+G+MDRVMASHING+LVPL
Sbjct: 61  VNPTVYELDQDPRGKEIERALMRLLGNYSSVVPVVFIGGKLIGAMDRVMASHINGTLVPL 120

Query: 122 LKEAGALWL 127
           LKEAGALWL
Sbjct: 121 LKEAGALWL 128

[Close]

BLAST of CmoCh17G013680 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 7.9e-35
Identity = 83/137 (60.58%), Postives = 100/137 (72.99%), Query Frame = 1


Query: 2   MHYQAERSWDYYMPAT--------AARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLL 61
           M YQ E SW  Y  ++         A   + R+  LA+ SAVVIFSVS+CCMCHA+K L 
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 62  CGMGVSSTVYELDHDPRGKEIERALMRLV---GAASP-PVPVVFIGGKLVGSMDRVMASH 121
            GMGVS  V+ELD  P G +I+RAL+RL+   G++SP  +PVVFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 122 INGSLVPLLKEAGALWL 127
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of CmoCh17G013680 vs. TAIR10
Match: AT5G14070.1 (AT5G14070.1 Thioredoxin superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-33
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 25  RVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV-- 84
           ++  +AA +AVVIFSVS+CCMCHA+KRL  GMGVS  V+ELD  P G EI RAL+RL+  
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 85  ---GAASP-PVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              GA SP  +PVVFIGGK+VG+M+RVMASHINGSLVPLLK+AGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmoCh17G013680 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 3.6e-27
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 1


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +D + ++     VVI+S SSCCM H +K LLC  G +  VYELD   RG+EIE+AL+RL 
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL- 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              SP VP VFIGG+LVG  + VM+ H+NGSL+P+LK AGALW+
Sbjct: 61  -GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of CmoCh17G013680 vs. TAIR10
Match: AT3G21460.1 (AT3G21460.1 Glutaredoxin family protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 62/104 (59.62%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +D V RLA+  AVVIFS S+CCM HA+KRL    GVS  + E+D D  GK+IE AL RL 
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARL- 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              SP VP VF+GGK VG+ + VM  H+NGSL  LLKEAGALWL
Sbjct: 61  -GCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of CmoCh17G013680 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +D++ ++ +  +VVIFS +SCCM H +K L    GV+ T+YELD   RGKEIE+AL +L 
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              SP VPVVFIGG+LVG  ++VM+ H+N SLVP+LK  GALWL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of CmoCh17G013680 vs. NCBI nr
Match: gi|821595495|ref|NP_001295802.1| (glutaredoxin-C1-like [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 8.7e-60
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 1


Query: 1   MMHYQAERSWDYYMP--ATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSW+YYMP  A+A+RDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           S TVYELDHDPRGK+IERALMRLVGA SPPVPVVFIGGKLVGSMDRVMASHING+LVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of CmoCh17G013680 vs. NCBI nr
Match: gi|659119876|ref|XP_008459889.1| (PREDICTED: glutaredoxin-C1-like [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 8.7e-60
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 1


Query: 1   MMHYQAERSWDYYMP--ATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSW+YYMP  A+A+RDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVSASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           S TVYELDHDPRGK+IERALMRLVGA SPPVPVVFIGGKLVGSMDRVMASHING+LVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of CmoCh17G013680 vs. NCBI nr
Match: gi|645231058|ref|XP_008222218.1| (PREDICTED: glutaredoxin-C1-like [Prunus mume])

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48
Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 1


Query: 1   MMHYQ-AERSWDYYMPATAAR-DPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQ AE SW YY+P   +  DP++RV RLAA SAVVIFSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MMHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           + TVYELD DPRGKEIERALMRL+G  SP VPVVFIGGKL+G+MDRVMASHINGSLVPLL
Sbjct: 61  NPTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

[Close]

BLAST of CmoCh17G013680 vs. NCBI nr
Match: gi|596299169|ref|XP_007227610.1| (hypothetical protein PRUPE_ppa021177mg [Prunus persica])

HSP 1 Score: 198.7 bits (504), Expect = 5.9e-48
Identity = 102/127 (80.31%), Postives = 111/127 (87.40%), Query Frame = 1


Query: 2   MHYQ-AERSWDYYMPATAAR-DPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVS 61
           MHYQ AE SW YY+P   +  DP++RV RLAA SAVVIFSVSSCCMCHA+KRL CGMGV+
Sbjct: 1   MHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGVN 60

Query: 62  STVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLK 121
            TVYELD DPRGKEIERALMRL+G  SP VPVVFIGGKL+G+MDRVMASHINGSLVPLLK
Sbjct: 61  PTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLLK 120

Query: 122 EAGALWL 127
           EAGALWL
Sbjct: 121 EAGALWL 126

[Close]

BLAST of CmoCh17G013680 vs. NCBI nr
Match: gi|703077781|ref|XP_010090679.1| (hypothetical protein L484_017485 [Morus notabilis])

HSP 1 Score: 196.4 bits (498), Expect = 2.9e-47
Identity = 99/128 (77.34%), Postives = 108/128 (84.38%), Query Frame = 1


Query: 2   MHYQAERSWDYYMPATAAR---DPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 61
           M YQA  SW YY+PA       DP++RV RLAA SAVV+FSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MQYQAADSWGYYVPAARCMGGGDPLERVARLAAESAVVVFSVSSCCMCHAVKRLFCGMGV 60

Query: 62  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 121
           + TVYELDHDPRGKEIERALMRL+G  +  VPVVFIGGKLVG+MD VMASHINGSLVPLL
Sbjct: 61  NPTVYELDHDPRGKEIERALMRLLGTPN-AVPVVFIGGKLVGAMDHVMASHINGSLVPLL 120

Query: 122 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

The following BLAST results are available for this feature:

BLAST of CmoCh17G013680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC3_ORYSJ	2.6e-43	71.11	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1	[more]
GRXC5_ORYSJ	8.2e-42	70.00	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2	[more]
GRXC7_ARATH	1.4e-33	60.58	Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2	[more]
GRC14_ORYSJ	1.8e-33	62.50	Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2	[more]
GRXC1_ORYSJ	1.8e-33	67.31	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	[more]

BLAST of CmoCh17G013680 vs. TrEMBL


Match Name	E-value	Identity	Description
U3RGD6_CUCSA	6.1e-60	91.41	Glutaredoxin OS=Cucumis sativus GN=GRX7 PE=2 SV=1	[more]
M5XSA7_PRUPE	4.1e-48	80.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021177mg PE=4 SV=1	[more]
W9QWA6_9ROSA	2.0e-47	77.34	Uncharacterized protein OS=Morus notabilis GN=L484_017485 PE=4 SV=1	[more]
B9GMP6_POPTR	3.8e-46	73.44	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13440g PE=4 SV=2	[more]
B9RM97_RICCO	3.8e-46	76.74	Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_1078780 PE=4 SV=1	[more]

BLAST of CmoCh17G013680 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02000.1	7.9e-35	60.58	Thioredoxin superfamily protein	[more]
AT5G14070.1	1.1e-33	68.52	Thioredoxin superfamily protein	[more]
AT5G18600.1	3.6e-27	54.81	Thioredoxin superfamily protein	[more]
AT3G21460.1	1.4e-26	59.62	Glutaredoxin family protein	[more]
AT4G15680.1	3.0e-26	54.81	Thioredoxin superfamily protein	[more]

BLAST of CmoCh17G013680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|821595495\|ref\|NP_001295802.1\|	8.7e-60	91.41	glutaredoxin-C1-like [Cucumis sativus]	[more]
gi\|659119876\|ref\|XP_008459889.1\|	8.7e-60	91.41	PREDICTED: glutaredoxin-C1-like [Cucumis melo]	[more]
gi\|645231058\|ref\|XP_008222218.1\|	1.5e-48	80.47	PREDICTED: glutaredoxin-C1-like [Prunus mume]	[more]
gi\|596299169\|ref\|XP_007227610.1\|	5.9e-48	80.31	hypothetical protein PRUPE_ppa021177mg [Prunus persica]	[more]
gi\|703077781\|ref\|XP_010090679.1\|	2.9e-47	77.34	hypothetical protein L484_017485 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013680.1	CmoCh17G013680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 35..99 score: 4.7
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 23..125 score: 21
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 26..126 score: 1.0
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 25..125 score: 7.7
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 23..125 score: 1.12
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..126 score: 4.9
None	No IPR available	PANTHER	PTHR10168:SF62	GLUTAREDOXIN-C7-RELATED	coord: 1..126 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G013680	Cucsa.349400	Cucumber (Gy14) v1	cgycmoB0951
CmoCh17G013680	CmaCh17G014240	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G013680	CmaCh08G000090	Cucurbita maxima (Rimu)	cmacmoB899
CmoCh17G013680	Cla001498	Watermelon (97103) v1	cmowmB347
CmoCh17G013680	Csa6G092540	Cucumber (Chinese Long) v2	cmocuB358
CmoCh17G013680	MELO3C022339	Melon (DHL92) v3.5.1	cmomeB308
CmoCh17G013680	ClCG06G001900	Watermelon (Charleston Gray)	cmowcgB318
CmoCh17G013680	CSPI06G07560	Wild cucumber (PI 183967)	cmocpiB361
CmoCh17G013680	Lsi09G017510	Bottle gourd (USVL1VR-Ls)	cmolsiB322
CmoCh17G013680	Cp4.1LG12g09960	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G013680	Cp4.1LG17g09310	Cucurbita pepo (Zucchini)	cmocpeB352
CmoCh17G013680	MELO3C022339.2	Melon (DHL92) v3.6.1	cmomedB353
CmoCh17G013680	CsaV3_6G007950	Cucumber (Chinese Long) v3	cmocucB0433
CmoCh17G013680	Cla97C06G111230	Watermelon (97103) v2	cmowmbB354
CmoCh17G013680	Bhi12G002146	Wax gourd	cmowgoB0456
CmoCh17G013680	CsGy6G007620	Cucumber (Gy14) v2	cgybcmoB734

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G013680	Wax gourd	cmowgoB0479
CmoCh17G013680	Cucurbita moschata (Rifu)	cmocmoB322
CmoCh17G013680	Cucurbita pepo (Zucchini)	cmocpeB372
CmoCh17G013680	Silver-seed gourd	carcmoB0021
CmoCh17G013680	Silver-seed gourd	carcmoB1312