CmaCh08G000090 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G000090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Glutaredoxin
Location	Cma_Chr08 : 53332 .. 53712 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCATTACCAGGCAGGGCGTTCATGGGAATACTACATGCCGCCCACTGCAGCCAGAGACCCAGTGGACCGTGTACTCCGGCTTGCGGCGGAGAGCGCGGTGGTGATATTCAGCGTCAGCAGCTGCTGCATGTGCCACGCTCTCAAGCGCCTGCTATGCGGTATGGGAGTGAGCCCAACCGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTAATGAGGCTCGTCGGACCCGCCGCACCGTCGGTGCCGGTCGTCTTTATTGGCGGAAAGCTGGTGGGCTCTATGGACAGAGTTATGGCTTCTCACATCAATGGAACTTTGGTCCCTCTTCTCAAGGAAGCCGGGGCCTTATGGCTTTAG

mRNA sequence

ATGATGCATTACCAGGCAGGGCGTTCATGGGAATACTACATGCCGCCCACTGCAGCCAGAGACCCAGTGGACCGTGTACTCCGGCTTGCGGCGGAGAGCGCGGTGGTGATATTCAGCGTCAGCAGCTGCTGCATGTGCCACGCTCTCAAGCGCCTGCTATGCGGTATGGGAGTGAGCCCAACCGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTAATGAGGCTCGTCGGACCCGCCGCACCGTCGGTGCCGGTCGTCTTTATTGGCGGAAAGCTGGTGGGCTCTATGGACAGAGTTATGGCTTCTCACATCAATGGAACTTTGGTCCCTCTTCTCAAGGAAGCCGGGGCCTTATGGCTTTAG

Coding sequence (CDS)

ATGATGCATTACCAGGCAGGGCGTTCATGGGAATACTACATGCCGCCCACTGCAGCCAGAGACCCAGTGGACCGTGTACTCCGGCTTGCGGCGGAGAGCGCGGTGGTGATATTCAGCGTCAGCAGCTGCTGCATGTGCCACGCTCTCAAGCGCCTGCTATGCGGTATGGGAGTGAGCCCAACCGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTAATGAGGCTCGTCGGACCCGCCGCACCGTCGGTGCCGGTCGTCTTTATTGGCGGAAAGCTGGTGGGCTCTATGGACAGAGTTATGGCTTCTCACATCAATGGAACTTTGGTCCCTCTTCTCAAGGAAGCCGGGGCCTTATGGCTTTAG

Protein sequence

MMHYQAGRSWEYYMPPTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL

Homology

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BLAST of CmaCh08G000090 vs. Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.8e-44
Identity = 95/135 (70.37%), Postives = 106/135 (78.52%), Query Frame = 1


Query: 2   MHYQAGRSWEYYMPPTAARDPVD----RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMG 61
           M Y A     +YMP  A    V+    RV RLA+ESAVV+FSVSSCCMCHA+KRL CGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 62  VSPTVYELDHDPRGKEIERALMRLV---GPAA---PSVPVVFIGGKLVGSMDRVMASHIN 121
           V PTV+ELD DPRG+E+ERAL RLV   GPAA   P VPVVFIGGKLVG+MDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 122 GTLVPLLKEAGALWL 127
           G+LVPLLKEAGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of CmaCh08G000090 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 2.8e-42
Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 1


Query: 1   MMHYQAGRSWEYYMPPTA------ARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLC 60
           M +  A     +YMP  A      A    +RV RLA+ESAVV+FSVSSCCMCHA+KRL C
Sbjct: 1   MQYGAAAAEQAWYMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFC 60

Query: 61  GMGVSPTVYELDHDPRGKEIERALMRLV---GPAAPSVPVVFIGGKLVGSMDRVMASHIN 120
           GMGV P V+ELD DPRG+++ERAL RLV   G AA +VPVVFIGGKLVG+MDRVMA+HIN
Sbjct: 61  GMGVHPAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GTLVPLLKEAGALWL 127
           G+LVPLLKEAGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of CmaCh08G000090 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.7e-35
Identity = 70/104 (67.31%), Postives = 88/104 (84.62%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +DRV RLAA+ AVVIFS+SSCCMCH + RL C +GV+PTV ELD DPRGKE+E+AL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 83  GPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
           G  +P+VP VFIGG+LVGS D+VM+ H++G LVPLL+ AGALW+
Sbjct: 61  G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of CmaCh08G000090 vs. Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-34
Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 1


Query: 25  RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLVG- 84
           R+  LA+ESAVVIFSVS+CCMCHA+K L  GMGVSP V+ELD  P G +I+RAL+RL+G 
Sbjct: 31  RIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGC 90

Query: 85  ---PAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
               +  S+PVVFIGGKLVG+MDRVMASHING+LVPLLK+AGALWL
Sbjct: 91  SGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of CmaCh08G000090 vs. Swiss-Prot
Match: GRXC8_ARATH (Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-33
Identity = 72/108 (66.67%), Postives = 89/108 (82.41%), Query Frame = 1


Query: 25  RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLVG- 84
           ++  +AAE+AVVIFSVS+CCMCHA+KRL  GMGVSP V+ELD  P G EI RAL+RL+G 
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 85  -----PAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
                 +  ++PVVFIGGK+VG+M+RVMASHING+LVPLLK+AGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmaCh08G000090 vs. TrEMBL
Match: U3RGD6_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX7 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-59
Identity = 117/128 (91.41%), Postives = 121/128 (94.53%), Query Frame = 1


Query: 1   MMHYQAGRSWEYYMPPT--AARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQA RSWEYYMP T  A+RDPVDRV+RLAAESAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           SPTVYELDHDPRGK+IERALMRLVG  +P VPVVFIGGKLVGSMDRVMASHINGTLVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of CmaCh08G000090 vs. TrEMBL
Match: W9QWA6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017485 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.4e-48
Identity = 102/130 (78.46%), Postives = 112/130 (86.15%), Query Frame = 1


Query: 2   MHYQAGRSWEYYMPPTAAR-----DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGM 61
           M YQA  SW YY+P  AAR     DP++RV RLAAESAVV+FSVSSCCMCHA+KRL CGM
Sbjct: 1   MQYQAADSWGYYVP--AARCMGGGDPLERVARLAAESAVVVFSVSSCCMCHAVKRLFCGM 60

Query: 62  GVSPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVP 121
           GV+PTVYELDHDPRGKEIERALMRL+G    +VPVVFIGGKLVG+MD VMASHING+LVP
Sbjct: 61  GVNPTVYELDHDPRGKEIERALMRLLG-TPNAVPVVFIGGKLVGAMDHVMASHINGSLVP 120

Query: 122 LLKEAGALWL 127
           LLKEAGALWL
Sbjct: 121 LLKEAGALWL 127

[Close]

BLAST of CmaCh08G000090 vs. TrEMBL
Match: M5XSA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021177mg PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.3e-48
Identity = 100/127 (78.74%), Postives = 113/127 (88.98%), Query Frame = 1


Query: 2   MHYQ-AGRSWEYYMPPTAAR-DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVS 61
           MHYQ A  SW YY+P   +  DP++RV RLAA+SAVVIFSVSSCCMCHA+KRL CGMGV+
Sbjct: 1   MHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGVN 60

Query: 62  PTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLK 121
           PTVYELD DPRGKEIERALMRL+G  +P+VPVVFIGGKL+G+MDRVMASHING+LVPLLK
Sbjct: 61  PTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLLK 120

Query: 122 EAGALWL 127
           EAGALWL
Sbjct: 121 EAGALWL 126

[Close]

BLAST of CmaCh08G000090 vs. TrEMBL
Match: A0A0A0LMK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G405010 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-47
Identity = 94/125 (75.20%), Postives = 110/125 (88.00%), Query Frame = 1


Query: 2   MHYQAGRSWEYYMPPTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPT 61
           MHYQ   SW  YM  ++  DPVDR+ RLAAE+AVVIFSVS+CCMCHA+KRL CGMGV+PT
Sbjct: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 62  VYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEA 121
           VYELD DPRG ++E+ALMRL+G ++P VPVVFIGGKLVG+MDRVMASHI+GTLVPLLK+A
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSP-VPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 122 GALWL 127
           GALWL
Sbjct: 121 GALWL 124

[Close]

BLAST of CmaCh08G000090 vs. TrEMBL
Match: B9RM97_RICCO (Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_1078780 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-47
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 1


Query: 2   MHYQAGRSWE---YYMPPTA-ARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMG 61
           M YQA  SW    YYM P     DP++RV+RLA+ESAVVIFS+SSCCMCHA+KRL CGMG
Sbjct: 1   MQYQA-ESWSSNGYYMVPLMMGTDPIERVVRLASESAVVIFSISSCCMCHAVKRLFCGMG 60

Query: 62  VSPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPL 121
           V+PTVYELD DPRGKEIERALMRL+G  +  VPVVFIGGKL+G+MDRVMASHINGTLVPL
Sbjct: 61  VNPTVYELDQDPRGKEIERALMRLLGNYSSVVPVVFIGGKLIGAMDRVMASHINGTLVPL 120

Query: 122 LKEAGALWL 127
           LKEAGALWL
Sbjct: 121 LKEAGALWL 128

[Close]

BLAST of CmaCh08G000090 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-35
Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 1


Query: 25  RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLVG- 84
           R+  LA+ESAVVIFSVS+CCMCHA+K L  GMGVSP V+ELD  P G +I+RAL+RL+G 
Sbjct: 31  RIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGC 90

Query: 85  ---PAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
               +  S+PVVFIGGKLVG+MDRVMASHING+LVPLLK+AGALWL
Sbjct: 91  SGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of CmaCh08G000090 vs. TAIR10
Match: AT5G14070.1 (AT5G14070.1 Thioredoxin superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-34
Identity = 72/108 (66.67%), Postives = 89/108 (82.41%), Query Frame = 1


Query: 25  RVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLVG- 84
           ++  +AAE+AVVIFSVS+CCMCHA+KRL  GMGVSP V+ELD  P G EI RAL+RL+G 
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 85  -----PAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
                 +  ++PVVFIGGK+VG+M+RVMASHING+LVPLLK+AGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmaCh08G000090 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 2.5e-28
Identity = 57/104 (54.81%), Postives = 77/104 (74.04%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +D + ++  E  VVI+S SSCCM H +K LLC  G +P VYELD   RG+EIE+AL+RL 
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL- 60

Query: 83  GPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              +P+VP VFIGG+LVG  + VM+ H+NG+L+P+LK AGALW+
Sbjct: 61  -GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of CmaCh08G000090 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 57/104 (54.81%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           +D++ ++ +E +VVIFS +SCCM H +K L    GV+PT+YELD   RGKEIE+AL +L 
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 83  GPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              +P+VPVVFIGG+LVG  ++VM+ H+N +LVP+LK  GALWL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of CmaCh08G000090 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 57/104 (54.81%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 23  VDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSPTVYELDHDPRGKEIERALMRLV 82
           ++ + ++ +E +VVIFS +SCCM H +K L   +GV+PT+YELD   RGKEIE AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 83  GPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLLKEAGALWL 127
              +P+VPVVFIGG+LVG  ++VM+ H+N +LVP+LK AGALWL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CmaCh08G000090 vs. NCBI nr
Match: gi|821595495|ref|NP_001295802.1| (glutaredoxin-C1-like [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-59
Identity = 117/128 (91.41%), Postives = 121/128 (94.53%), Query Frame = 1


Query: 1   MMHYQAGRSWEYYMPPT--AARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQA RSWEYYMP T  A+RDPVDRV+RLAAESAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           SPTVYELDHDPRGK+IERALMRLVG  +P VPVVFIGGKLVGSMDRVMASHINGTLVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of CmaCh08G000090 vs. NCBI nr
Match: gi|659119876|ref|XP_008459889.1| (PREDICTED: glutaredoxin-C1-like [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 3.3e-59
Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 1


Query: 1   MMHYQAGRSWEYYMP--PTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQA RSWEYYMP   +A+RDPVDRV+RLAAESAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVSASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           SPTVYELDHDPRGK+IERALMRLVG  +P VPVVFIGGKLVGSMDRVMASHINGTLVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of CmaCh08G000090 vs. NCBI nr
Match: gi|1009129414|ref|XP_015881752.1| (PREDICTED: glutaredoxin-C1-like [Ziziphus jujuba])

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 100/128 (78.12%), Postives = 113/128 (88.28%), Query Frame = 1


Query: 2   MHYQ-AGRSWEYYMPPTAAR--DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 61
           MHYQ +  SW YY+P       DP++RV+RLA+ESAVVIFSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MHYQQSSESWGYYVPTVRCMGSDPLERVVRLASESAVVIFSVSSCCMCHAVKRLFCGMGV 60

Query: 62  SPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLL 121
           +PTVYELD DPRGKEIERALMRL+G  +P+VPVVFIGGKL+G+MDRVMASHINGTLVPLL
Sbjct: 61  NPTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGAMDRVMASHINGTLVPLL 120

Query: 122 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

[Close]

BLAST of CmaCh08G000090 vs. NCBI nr
Match: gi|645231058|ref|XP_008222218.1| (PREDICTED: glutaredoxin-C1-like [Prunus mume])

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 101/128 (78.91%), Postives = 114/128 (89.06%), Query Frame = 1


Query: 1   MMHYQ-AGRSWEYYMPPTAAR-DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQ A  SW YY+P   +  DP++RV RLAA+SAVVIFSVSSCCMCHA+KRL CGMGV
Sbjct: 1   MMHYQQAEASWGYYVPVRMSMGDPLERVARLAAKSAVVIFSVSSCCMCHAVKRLFCGMGV 60

Query: 61  SPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120
           +PTVYELD DPRGKEIERALMRL+G  +P+VPVVFIGGKL+G+MDRVMASHING+LVPLL
Sbjct: 61  NPTVYELDQDPRGKEIERALMRLLG-NSPAVPVVFIGGKLIGTMDRVMASHINGSLVPLL 120

Query: 121 KEAGALWL 127
           KEAGALWL
Sbjct: 121 KEAGALWL 127

[Close]

BLAST of CmaCh08G000090 vs. NCBI nr
Match: gi|703077781|ref|XP_010090679.1| (hypothetical protein L484_017485 [Morus notabilis])

HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48
Identity = 102/130 (78.46%), Postives = 112/130 (86.15%), Query Frame = 1


Query: 2   MHYQAGRSWEYYMPPTAAR-----DPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGM 61
           M YQA  SW YY+P  AAR     DP++RV RLAAESAVV+FSVSSCCMCHA+KRL CGM
Sbjct: 1   MQYQAADSWGYYVP--AARCMGGGDPLERVARLAAESAVVVFSVSSCCMCHAVKRLFCGM 60

Query: 62  GVSPTVYELDHDPRGKEIERALMRLVGPAAPSVPVVFIGGKLVGSMDRVMASHINGTLVP 121
           GV+PTVYELDHDPRGKEIERALMRL+G    +VPVVFIGGKLVG+MD VMASHING+LVP
Sbjct: 61  GVNPTVYELDHDPRGKEIERALMRLLG-TPNAVPVVFIGGKLVGAMDHVMASHINGSLVP 120

Query: 122 LLKEAGALWL 127
           LLKEAGALWL
Sbjct: 121 LLKEAGALWL 127

The following BLAST results are available for this feature:

BLAST of CmaCh08G000090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC3_ORYSJ	8.8e-44	70.37	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1	[more]
GRXC5_ORYSJ	2.8e-42	66.67	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2	[more]
GRXC1_ORYSJ	9.7e-35	67.31	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	[more]
GRXC7_ARATH	2.2e-34	70.75	Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2	[more]
GRXC8_ARATH	2.4e-33	66.67	Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=1 SV=2	[more]

BLAST of CmaCh08G000090 vs. TrEMBL


Match Name	E-value	Identity	Description
U3RGD6_CUCSA	1.0e-59	91.41	Glutaredoxin OS=Cucumis sativus GN=GRX7 PE=2 SV=1	[more]
W9QWA6_9ROSA	2.4e-48	78.46	Uncharacterized protein OS=Morus notabilis GN=L484_017485 PE=4 SV=1	[more]
M5XSA7_PRUPE	5.3e-48	78.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021177mg PE=4 SV=1	[more]
A0A0A0LMK1_CUCSA	2.0e-47	75.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G405010 PE=4 SV=1	[more]
B9RM97_RICCO	3.5e-47	76.74	Glutaredoxin, grx, putative OS=Ricinus communis GN=RCOM_1078780 PE=4 SV=1	[more]

BLAST of CmaCh08G000090 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02000.1	1.2e-35	70.75	Thioredoxin superfamily protein	[more]
AT5G14070.1	1.3e-34	66.67	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.5e-28	54.81	Thioredoxin superfamily protein	[more]
AT4G15680.1	1.6e-27	54.81	Thioredoxin superfamily protein	[more]
AT4G15700.1	1.6e-27	54.81	Thioredoxin superfamily protein	[more]

BLAST of CmaCh08G000090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|821595495\|ref\|NP_001295802.1\|	1.5e-59	91.41	glutaredoxin-C1-like [Cucumis sativus]	[more]
gi\|659119876\|ref\|XP_008459889.1\|	3.3e-59	90.63	PREDICTED: glutaredoxin-C1-like [Cucumis melo]	[more]
gi\|1009129414\|ref\|XP_015881752.1\|	1.2e-48	78.13	PREDICTED: glutaredoxin-C1-like [Ziziphus jujuba]	[more]
gi\|645231058\|ref\|XP_008222218.1\|	2.0e-48	78.91	PREDICTED: glutaredoxin-C1-like [Prunus mume]	[more]
gi\|703077781\|ref\|XP_010090679.1\|	3.4e-48	78.46	hypothetical protein L484_017485 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G000090.1	CmaCh08G000090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 35..99 score: 2.9
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 23..125 score: 22
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 27..126 score: 3.0
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 24..125 score: 8.1
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 23..125 score: 1.34
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..126 score: 3.6
None	No IPR available	PANTHER	PTHR10168:SF62	GLUTAREDOXIN-C7-RELATED	coord: 1..126 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G000090	Cucsa.349400	Cucumber (Gy14) v1	cgycmaB0955
CmaCh08G000090	Cla001498	Watermelon (97103) v1	cmawmB879
CmaCh08G000090	Csa6G092540	Cucumber (Chinese Long) v2	cmacuB903
CmaCh08G000090	MELO3C022339	Melon (DHL92) v3.5.1	cmameB817
CmaCh08G000090	ClCG06G001900	Watermelon (Charleston Gray)	cmawcgB805
CmaCh08G000090	CSPI06G07560	Wild cucumber (PI 183967)	cmacpiB923
CmaCh08G000090	CmoCh17G013680	Cucurbita moschata (Rifu)	cmacmoB899
CmaCh08G000090	Lsi09G017510	Bottle gourd (USVL1VR-Ls)	cmalsiB812
CmaCh08G000090	Cp4.1LG12g09960	Cucurbita pepo (Zucchini)	cmacpeB905
CmaCh08G000090	Cp4.1LG17g09310	Cucurbita pepo (Zucchini)	cmacpeB914
CmaCh08G000090	MELO3C022339.2	Melon (DHL92) v3.6.1	cmamedB915
CmaCh08G000090	CsaV3_6G007950	Cucumber (Chinese Long) v3	cmacucB1072
CmaCh08G000090	Cla97C06G111230	Watermelon (97103) v2	cmawmbB922
CmaCh08G000090	Bhi12G002146	Wax gourd	cmawgoB1096
CmaCh08G000090	CsGy6G007620	Cucumber (Gy14) v2	cgybcmaB871

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G000090	CmaCh17G014240	Cucurbita maxima (Rimu)	cmacmaB384

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G000090	Silver-seed gourd	carcmaB0023
CmaCh08G000090	Silver-seed gourd	carcmaB1361
CmaCh08G000090	Cucurbita moschata (Rifu)	cmacmoB913