Cp4.1LG17g07420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g07420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCP12
LocationCp4.1LG17 : 5912115 .. 5912492 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCGATTTCCGGCACGACGGTGGCAGCCTTAAAAGCGGTGGCTGACTCGCAGAAACCCGAATCGCCGGTCCTCCGATTCACCCGGCTCAGCTACAAGTGGAAGCGGTGGACTGCCGGTCGGATTAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAGAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCACTCGAGGAGTTCTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTACGAGGACTAA

mRNA sequence

ATGGCAGCGATTTCCGGCACGACGGTGGCAGCCTTAAAAGCGGTGGCTGACTCGCAGAAACCCGAATCGCCGGTCCTCCGATTCACCCGGCTCAGCTACAAGTGGAAGCGGTGGACTGCCGGTCGGATTAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAGAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCACTCGAGGAGTTCTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTACGAGGACTAA

Coding sequence (CDS)

ATGGCAGCGATTTCCGGCACGACGGTGGCAGCCTTAAAAGCGGTGGCTGACTCGCAGAAACCCGAATCGCCGGTCCTCCGATTCACCCGGCTCAGCTACAAGTGGAAGCGGTGGACTGCCGGTCGGATTAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAGAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCACTCGAGGAGTTCTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTACGAGGACTAA

Protein sequence

MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED
Homology
[Close]
BLAST of Cp4.1LG17g07420 vs. Swiss-Prot
Match: CP121_ARATH (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.8e-26
Identity = 70/125 (56.00%), Postives = 88/125 (70.40%), Query Frame = 1 

Query: 3   AISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKVVE 62
           A +G  VA  + V    +P + VL   RL+Y WK  +  R+ VV   A +   ISEKV +
Sbjct: 5   AAAGLNVATPRVVV---RPVARVLGPVRLNYPWKFGSMKRMVVVK--ATSEGEISEKVEK 64

Query: 63  SIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFCKDNPETEEC 122
           SI+ A+ETC+DDP SGEC AAWDEVEELSAAASHARD+ K   +DPLEE+C DNPET+EC
Sbjct: 65  SIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDEC 124

Query: 123 RTYED 126
           RTY++
Sbjct: 125 RTYDN 124

[Close]
BLAST of Cp4.1LG17g07420 vs. Swiss-Prot
Match: CP122_ARATH (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.0e-23
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 1 

Query: 1   MAAIS-GTTVAALKAVADSQKPESPVLRFTRLSYKWKRW--TAGRISVVGPVAAAPDR-I 60
           MA I+ G  +A  +    S+     +     L+  W     T  R+  + P+ AAP+  I
Sbjct: 1   MATIATGLNIATQRVFVTSENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGI 60

Query: 61  SEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFCKDN 120
           S+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHARD+ K   +DPLEE+CKDN
Sbjct: 61  SDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDN 120

Query: 121 PETEECRTYED 126
           PET ECRTY++
Sbjct: 121 PETNECRTYDN 131

[Close]
BLAST of Cp4.1LG17g07420 vs. Swiss-Prot
Match: CP123_ARATH (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-13
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 

Query: 54  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFC 113
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 114 KDNPETEECRTYED 126
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]
BLAST of Cp4.1LG17g07420 vs. Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii GN=CP12 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-12
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 

Query: 56  ISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKD----ADPLEEFC 115
           +++KV +++K AE+ C+    S +CA AWD VEELSAA SH +D +K      DPLE FC
Sbjct: 35  LNKKVQDAVKEAEDACAKGT-SADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFC 94

Query: 116 KDNPETEECRTYED 126
           KD P+ +ECR YED
Sbjct: 95  KDAPDADECRVYED 107

[Close]
BLAST of Cp4.1LG17g07420 vs. TrEMBL
Match: A0A0A0K832_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407670 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-48
Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAI+G+++AA KAV DS K E PVLR +RLSY WKRWT+GR+S VG VAAAPDRISEKV
Sbjct: 57  MAAITGSSMAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKV 116

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAE TCS+DP SGECAAAWDEVEELSAAASHARDRL  +DPLE+FCKDNPETEEC
Sbjct: 117 VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEEC 176

Query: 121 RTYED 126
           RTYED
Sbjct: 177 RTYED 181

[Close]
BLAST of Cp4.1LG17g07420 vs. TrEMBL
Match: F6HPR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02480 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.8e-33
Identity = 85/128 (66.41%), Postives = 97/128 (75.78%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKR---WTAGRISVVGPVAAAPDRIS 60
           +A +S +T   L   ADS  P+S  ++   LS  WKR   + AGR+ V  PVAAAPD IS
Sbjct: 73  IAGVSLSTPRVLARAADS--PKSQTIQSPWLSNPWKRPSRFGAGRMCV-RPVAAAPDSIS 132

Query: 61  EKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPET 120
           EKVVESIKNAEE CSDDP SGEC AAWDEVEELSAAASHARD+ K++DPLE +CKDNPE 
Sbjct: 133 EKVVESIKNAEEKCSDDPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDNPED 192

Query: 121 EECRTYED 126
           EECRTYED
Sbjct: 193 EECRTYED 197

[Close]
BLAST of Cp4.1LG17g07420 vs. TrEMBL
Match: B7XB92_FAGCR (Chloroplast protein 12 OS=Fagus crenata GN=CP12 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-32
Identity = 79/130 (60.77%), Postives = 98/130 (75.38%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADS-QKPESPVLRFTRLSYKWKRWT----AGRISVVGPVAAAPDR 60
           MA I+G  ++  + +A S   P++  ++   LS+ WKR T    AGR   V PV+AAP++
Sbjct: 1   MATIAGLNLSTPRVLAKSADSPKAQTIKSPWLSHSWKRPTLFGYAGRSMQVRPVSAAPEK 60

Query: 61  ISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNP 120
           IS+KV ESIK+AEE C+ DP SGEC AAWDEVEELSAAASHARD+ K +DPLEE+CKDNP
Sbjct: 61  ISDKVAESIKDAEEACAGDPASGECVAAWDEVEELSAAASHARDKKKGSDPLEEYCKDNP 120

Query: 121 ETEECRTYED 126
           ETEECRTYED
Sbjct: 121 ETEECRTYED 130

[Close]
BLAST of Cp4.1LG17g07420 vs. TrEMBL
Match: A0A0D2TDJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G122700 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-30
Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVAD--SQKPESPVLRFTRLSYKWKRWTAG--RISVVGPVAAAPDRI 60
           MA +S  ++ +L+AVA+    K   PV +   LS  WKR +    R+ V+ PV AAPD I
Sbjct: 1   MATLSSVSLVSLRAVANVRDSKKGGPV-KVATLSQPWKRVSQSQRRMQVMKPVRAAPDSI 60

Query: 61  SEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPE 120
           SEKV +S+K A+E CSDDP SGEC AAWDEVEELSAAASHARD+ KD DPLE +CKDNPE
Sbjct: 61  SEKVEKSVKEAQEACSDDPASGECVAAWDEVEELSAAASHARDKKKDNDPLENYCKDNPE 120

Query: 121 TEECRTYED 126
           T+ECRTY++
Sbjct: 121 TDECRTYDN 128

[Close]
BLAST of Cp4.1LG17g07420 vs. TrEMBL
Match: A0A0D2T0A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G139400 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-30
Identity = 74/125 (59.20%), Postives = 92/125 (73.60%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKV 60
           MA +S   +   + +A+   P+ P L+   L+  WKR +  ++ V GPV AAPD ISEKV
Sbjct: 1   MATLSSVNLVTPRTIANG--PDVPTLKVPCLNRPWKRVSPMKLRV-GPVRAAPDGISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
            +SIK A+E CSDDP SGEC AAWDEVEELSAAASHARD+ KD DPLE +CKDNPET+EC
Sbjct: 61  EKSIKEAQEMCSDDPASGECVAAWDEVEELSAAASHARDKKKDDDPLENYCKDNPETDEC 120

Query: 121 RTYED 126
           RTY++
Sbjct: 121 RTYDN 122

[Close]
BLAST of Cp4.1LG17g07420 vs. TAIR10
Match: AT2G47400.1 (AT2G47400.1 CP12 domain-containing protein 1)

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 70/125 (56.00%), Postives = 88/125 (70.40%), Query Frame = 1 

Query: 3   AISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKVVE 62
           A +G  VA  + V    +P + VL   RL+Y WK  +  R+ VV   A +   ISEKV +
Sbjct: 5   AAAGLNVATPRVVV---RPVARVLGPVRLNYPWKFGSMKRMVVVK--ATSEGEISEKVEK 64

Query: 63  SIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFCKDNPETEEC 122
           SI+ A+ETC+DDP SGEC AAWDEVEELSAAASHARD+ K   +DPLEE+C DNPET+EC
Sbjct: 65  SIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDEC 124

Query: 123 RTYED 126
           RTY++
Sbjct: 125 RTYDN 124

[Close]
BLAST of Cp4.1LG17g07420 vs. TAIR10
Match: AT3G62410.1 (AT3G62410.1 CP12 domain-containing protein 2)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 1 

Query: 1   MAAIS-GTTVAALKAVADSQKPESPVLRFTRLSYKWKRW--TAGRISVVGPVAAAPDR-I 60
           MA I+ G  +A  +    S+     +     L+  W     T  R+  + P+ AAP+  I
Sbjct: 1   MATIATGLNIATQRVFVTSENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGI 60

Query: 61  SEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFCKDN 120
           S+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHARD+ K   +DPLEE+CKDN
Sbjct: 61  SDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDN 120

Query: 121 PETEECRTYED 126
           PET ECRTY++
Sbjct: 121 PETNECRTYDN 131

[Close]
BLAST of Cp4.1LG17g07420 vs. TAIR10
Match: AT1G76560.1 (AT1G76560.1 CP12 domain-containing protein 3)

HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1 

Query: 54  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFC 113
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 114 KDNPETEECRTYED 126
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]
BLAST of Cp4.1LG17g07420 vs. NCBI nr
Match: gi|659101204|ref|XP_008451482.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 4.3e-51
Identity = 106/125 (84.80%), Postives = 115/125 (92.00%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAI+G+++AA KAV DS K ESPV R +RLSY WKRWT+GR+S VGPVAAAPDRISEKV
Sbjct: 1   MAAITGSSMAATKAVTDSPKIESPVHRSSRLSYPWKRWTSGRMSAVGPVAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAE TCS+DP SGECAAAWDEVEELSAAASHARDRLKDADPLE+FCKDNPETEEC
Sbjct: 61  VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]
BLAST of Cp4.1LG17g07420 vs. NCBI nr
Match: gi|700189781|gb|KGN45014.1| (hypothetical protein Csa_7G407670 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAI+G+++AA KAV DS K E PVLR +RLSY WKRWT+GR+S VG VAAAPDRISEKV
Sbjct: 57  MAAITGSSMAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKV 116

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 120
           VESIKNAE TCS+DP SGECAAAWDEVEELSAAASHARDRL  +DPLE+FCKDNPETEEC
Sbjct: 117 VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEEC 176

Query: 121 RTYED 126
           RTYED
Sbjct: 177 RTYED 181

[Close]
BLAST of Cp4.1LG17g07420 vs. NCBI nr
Match: gi|778730422|ref|XP_004135995.2| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 9.3e-46
Identity = 97/117 (82.91%), Postives = 104/117 (88.89%), Query Frame = 1 

Query: 9   VAALKAVADSQKPESPVLRFTRLSYKWKRWTAGRISVVGPVAAAPDRISEKVVESIKNAE 68
           +AA KAV DS K E PVLR +RLSY WKRWT+GR+S VG VAAAPDRISEKVVESIKNAE
Sbjct: 1   MAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKVVESIKNAE 60

Query: 69  ETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 126
            TCS+DP SGECAAAWDEVEELSAAASHARDRL  +DPLE+FCKDNPETEECRTYED
Sbjct: 61  VTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEECRTYED 117

[Close]
BLAST of Cp4.1LG17g07420 vs. NCBI nr
Match: gi|225425676|ref|XP_002275043.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic [Vitis vinifera])

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-33
Identity = 85/128 (66.41%), Postives = 97/128 (75.78%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVADSQKPESPVLRFTRLSYKWKR---WTAGRISVVGPVAAAPDRIS 60
           +A +S +T   L   ADS  P+S  ++   LS  WKR   + AGR+ V  PVAAAPD IS
Sbjct: 4   IAGVSLSTPRVLARAADS--PKSQTIQSPWLSNPWKRPSRFGAGRMCV-RPVAAAPDSIS 63

Query: 61  EKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPET 120
           EKVVESIKNAEE CSDDP SGEC AAWDEVEELSAAASHARD+ K++DPLE +CKDNPE 
Sbjct: 64  EKVVESIKNAEEKCSDDPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDNPED 123

Query: 121 EECRTYED 126
           EECRTYED
Sbjct: 124 EECRTYED 128

[Close]
BLAST of Cp4.1LG17g07420 vs. NCBI nr
Match: gi|747065799|ref|XP_011079555.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-33
Identity = 82/132 (62.12%), Postives = 102/132 (77.27%), Query Frame = 1 

Query: 1   MAAISGTTVAALKAVA---DSQKPESPVLRFTRLSYKWKRWTA----GRISVVGPVAAAP 60
           MAA++G ++   K  A   DS KP +  ++F+ L+  WKR T     GR+  V PVAAAP
Sbjct: 1   MAAVAGVSITTPKVFAKLSDSSKPHA--VKFSLLNSPWKRCTTQFSHGRM-YVRPVAAAP 60

Query: 61  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKD 120
           D+IS+KV +SIKNA+E CSDDP SGECAAAWDEVEELSAAASHARD+ K++DPLE FCKD
Sbjct: 61  DQISDKVEQSIKNAQEACSDDPVSGECAAAWDEVEELSAAASHARDKQKESDPLENFCKD 120

Query: 121 NPETEECRTYED 126
           NPET+ECRTY++
Sbjct: 121 NPETDECRTYDN 129

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g07420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CP121_ARATH2.8e-2656.00Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana GN=CP12-1 PE=... [more]
CP122_ARATH5.0e-2350.38Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana GN=CP12-2 PE=... [more]
CP123_ARATH4.7e-1351.35Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana GN=CP12-3 PE=... [more]
CP12_CHLRE2.3e-1251.35Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii GN=CP12 PE... [more]
BLAST of Cp4.1LG17g07420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K832_CUCSA1.4e-4881.60Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407670 PE=4 SV=1[more]
F6HPR1_VITVI4.8e-3366.41Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02480 PE=4 SV=... [more]
B7XB92_FAGCR1.1e-3260.77Chloroplast protein 12 OS=Fagus crenata GN=CP12 PE=2 SV=1[more]
A0A0D2TDJ0_GOSRA1.0e-3059.69Uncharacterized protein OS=Gossypium raimondii GN=B456_007G122700 PE=4 SV=1[more]
A0A0D2T0A5_GOSRA2.2e-3059.20Uncharacterized protein OS=Gossypium raimondii GN=B456_008G139400 PE=4 SV=1[more]
BLAST of Cp4.1LG17g07420 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47400.11.6e-2756.00 CP12 domain-containing protein 1[more]
AT3G62410.12.8e-2450.38 CP12 domain-containing protein 2[more]
AT1G76560.12.6e-1451.35 CP12 domain-containing protein 3[more]
BLAST of Cp4.1LG17g07420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101204|ref|XP_008451482.1|4.3e-5184.80PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis melo][more]
gi|700189781|gb|KGN45014.1|2.0e-4881.60hypothetical protein Csa_7G407670 [Cucumis sativus][more]
gi|778730422|ref|XP_004135995.2|9.3e-4682.91PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis sativus][more]
gi|225425676|ref|XP_002275043.1|6.9e-3366.41PREDICTED: calvin cycle protein CP12-1, chloroplastic [Vitis vinifera][more]
gi|747065799|ref|XP_011079555.1|6.9e-3362.12PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003823DUF_CP12
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g07420.1Cp4.1LG17g07420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003823Domain of unknown function CP12PFAMPF02672CP12coord: 56..124
score: 3.1
IPR003823Domain of unknown function CP12SMARTSM01093CP12_2coord: 56..125
score: 4.1
NoneNo IPR availablePANTHERPTHR33921FAMILY NOT NAMEDcoord: 2..125
score: 2.1
NoneNo IPR availablePANTHERPTHR33921:SF2CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATEDcoord: 2..125
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g07420Cucsa.096730Cucumber (Gy14) v1cgycpeB0189
Cp4.1LG17g07420CmaCh14G009310Cucurbita maxima (Rimu)cmacpeB269
Cp4.1LG17g07420CmaCh17G010320Cucurbita maxima (Rimu)cmacpeB376
Cp4.1LG17g07420CmaCh08G004710Cucurbita maxima (Rimu)cmacpeB917
Cp4.1LG17g07420CmoCh14G009560Cucurbita moschata (Rifu)cmocpeB232
Cp4.1LG17g07420CmoCh17G010090Cucurbita moschata (Rifu)cmocpeB339
Cp4.1LG17g07420CmoCh08G004600Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g07420Cla017360Watermelon (97103) v1cpewmB322
Cp4.1LG17g07420Csa4G003670Cucumber (Chinese Long) v2cpecuB315
Cp4.1LG17g07420MELO3C017917Melon (DHL92) v3.5.1cpemeB318
Cp4.1LG17g07420ClCG10G011400Watermelon (Charleston Gray)cpewcgB290
Cp4.1LG17g07420CSPI04G01230Wild cucumber (PI 183967)cpecpiB316
Cp4.1LG17g07420Lsi03G011110Bottle gourd (USVL1VR-Ls)cpelsiB266
Cp4.1LG17g07420MELO3C017917.2Melon (DHL92) v3.6.1cpemedB375
Cp4.1LG17g07420CsaV3_4G001210Cucumber (Chinese Long) v3cpecucB0393
Cp4.1LG17g07420Carg07124Silver-seed gourdcarcpeB0161
Cp4.1LG17g07420Carg13382Silver-seed gourdcarcpeB0632
Cp4.1LG17g07420Carg11158Silver-seed gourdcarcpeB1145
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g07420Cp4.1LG12g06080Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG17g07420Cp4.1LG03g05040Cucurbita pepo (Zucchini)cpecpeB336
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g07420Wild cucumber (PI 183967)cpecpiB344
Cp4.1LG17g07420Cucumber (Chinese Long) v2cpecuB343
Cp4.1LG17g07420Bottle gourd (USVL1VR-Ls)cpelsiB262
Cp4.1LG17g07420Watermelon (Charleston Gray)cpewcgB280
Cp4.1LG17g07420Watermelon (97103) v1cpewmB311
Cp4.1LG17g07420Melon (DHL92) v3.5.1cpemeB293
Cp4.1LG17g07420Cucumber (Gy14) v2cgybcpeB931
Cp4.1LG17g07420Melon (DHL92) v3.6.1cpemedB341
Cp4.1LG17g07420Silver-seed gourdcarcpeB1071
Cp4.1LG17g07420Cucumber (Chinese Long) v3cpecucB0422
Cp4.1LG17g07420Wax gourdcpewgoB0376
Cp4.1LG17g07420Wax gourdcpewgoB0414
Cp4.1LG17g07420Cucurbita pepo (Zucchini)cpecpeB332
Cp4.1LG17g07420Cucumber (Gy14) v1cgycpeB0580
Cp4.1LG17g07420Cucurbita maxima (Rimu)cmacpeB472
Cp4.1LG17g07420Cucurbita moschata (Rifu)cmocpeB430