CmoCh08G004600 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G004600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CP12, putative, expressed
Location	Cmo_Chr08 : 2849032 .. 2849409 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGATTTCCGGCACGGCGACGGCAGTCTTATAAGCGGTGGCTGACACGCAGAAACCCGAATCGCCGGTCCTCCGATCCACCCGGCTCAGCTACCAGTGTAAGCGATGGACTGCCGGTCGGATCAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAAAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTCGAGGAGTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTATGAGGACTAA

mRNA sequence

ATGGCAGCGATTTCCGGCACGGCGACGGCAAAACCCGAATCGCCGGTCCTCCGATCCACCCGGCTCAGCTACCAGTGTAAGCGATGGACTGCCGGTCGGATCAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAAAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTCGAGGAGTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTATGAGGACTAA

Coding sequence (CDS)

ATGGCAGCGATTTCCGGCACGGCGACGGCAAAACCCGAATCGCCGGTCCTCCGATCCACCCGGCTCAGCTACCAGTGTAAGCGATGGACTGCCGGTCGGATCAGTGTAGTTGGACCGGTGGCGGCCGCCCCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGATGATCCAGAAAGTGGGGAGTGTGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTCGAGGAGTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTATGAGGACTAA

Homology

[Close]

BLAST of CmoCh08G004600 vs. Swiss-Prot
Match: CP121_ARATH (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.4e-25
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 1


Query: 11  KPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGE 70
           +P + VL   RL+Y  K  +  R+ VV   A +   ISEKV +SI+ A+ETC+DDP SGE
Sbjct: 19  RPVARVLGPVRLNYPWKFGSMKRMVVVK--ATSEGEISEKVEKSIQEAKETCADDPVSGE 78

Query: 71  CAAAWDEVEELSAAASHARDRLK--DADPLEEFCKDNPETEECRTYED 117
           C AAWDEVEELSAAASHARD+ K   +DPLEE+C DNPET+ECRTY++
Sbjct: 79  CVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124

[Close]

BLAST of CmoCh08G004600 vs. Swiss-Prot
Match: CP122_ARATH (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-23
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 1


Query: 30  TAGRISVVGPVAAAPDR-ISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHA 89
           T  R+  + P+ AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHA
Sbjct: 42  TTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 101

Query: 90  RDRLK--DADPLEEFCKDNPETEECRTYED 117
           RD+ K   +DPLEE+CKDNPET ECRTY++
Sbjct: 102 RDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of CmoCh08G004600 vs. Swiss-Prot
Match: CP123_ARATH (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-13
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 45  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFC 104
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 105 KDNPETEECRTYED 117
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]

BLAST of CmoCh08G004600 vs. Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii GN=CP12 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-12
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 1


Query: 18  RSTRLSYQCKRWTAGRISVVGPVAAAPD-RISEKVVESIKNAEETCSDDPESGECAAAWD 77
           +S  +S    R  + R +VV   +  P   +++KV +++K AE+ C+    S +CA AWD
Sbjct: 5   KSVVISRPAVRPVSTRRAVVVRASGQPAVDLNKKVQDAVKEAEDACAKGT-SADCAVAWD 64

Query: 78  EVEELSAAASHARDRLKD----ADPLEEFCKDNPETEECRTYED 117
            VEELSAA SH +D +K      DPLE FCKD P+ +ECR YED
Sbjct: 65  TVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 107

[Close]

BLAST of CmoCh08G004600 vs. TrEMBL
Match: A0A0A0K832_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407670 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-42
Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = 1


Query: 1   MAAISGTATA---------KPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAI+G++ A         K E PVLRS+RLSY  KRWT+GR+S VG VAAAPDRISEKV
Sbjct: 57  MAAITGSSMAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKV 116

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 117
           VESIKNAE TCS+DP SGECAAAWDEVEELSAAASHARDRL  +DPLE+FCKDNPETEEC
Sbjct: 117 VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEEC 176

[Close]

BLAST of CmoCh08G004600 vs. TrEMBL
Match: F6HPR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02480 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-31
Identity = 79/112 (70.54%), Postives = 88/112 (78.57%), Query Frame = 1


Query: 8   ATAKPESPVLRSTRLSYQCKR---WTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSD 67
           A   P+S  ++S  LS   KR   + AGR+ V  PVAAAPD ISEKVVESIKNAEE CSD
Sbjct: 87  AADSPKSQTIQSPWLSNPWKRPSRFGAGRMCV-RPVAAAPDSISEKVVESIKNAEEKCSD 146

Query: 68  DPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 117
           DP SGEC AAWDEVEELSAAASHARD+ K++DPLE +CKDNPE EECRTYED
Sbjct: 147 DPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDNPEDEECRTYED 197

[Close]

BLAST of CmoCh08G004600 vs. TrEMBL
Match: B7XB92_FAGCR (Chloroplast protein 12 OS=Fagus crenata GN=CP12 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-30
Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 1


Query: 12  PESPVLRSTRLSYQCKRWT----AGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPE 71
           P++  ++S  LS+  KR T    AGR   V PV+AAP++IS+KV ESIK+AEE C+ DP 
Sbjct: 22  PKAQTIKSPWLSHSWKRPTLFGYAGRSMQVRPVSAAPEKISDKVAESIKDAEEACAGDPA 81

Query: 72  SGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 117
           SGEC AAWDEVEELSAAASHARD+ K +DPLEE+CKDNPETEECRTYED
Sbjct: 82  SGECVAAWDEVEELSAAASHARDKKKGSDPLEEYCKDNPETEECRTYED 130

[Close]

BLAST of CmoCh08G004600 vs. TrEMBL
Match: M5W6P4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013259mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-29
Identity = 66/85 (77.65%), Postives = 77/85 (90.59%), Query Frame = 1


Query: 32  GRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDR 91
           GR++++ PV+AAPD+ISEKV ESIK+AEETCSDDP SGEC AAWDEVEELSAAASHARD 
Sbjct: 48  GRMTMIRPVSAAPDKISEKVAESIKSAEETCSDDPASGECVAAWDEVEELSAAASHARDN 107

Query: 92  LKDADPLEEFCKDNPETEECRTYED 117
            K +DPLE FCKDNPET+ECRTY++
Sbjct: 108 KKTSDPLETFCKDNPETDECRTYDN 132

[Close]

BLAST of CmoCh08G004600 vs. TrEMBL
Match: W9SLB7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000210 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-28
Identity = 70/117 (59.83%), Postives = 86/117 (73.50%), Query Frame = 1


Query: 1   MAAISGTATAKPESPVLRSTR-LSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAE 60
           + A SG  + K     +R+ +  +Y  +    GR+ VV PV AAPD++S+KV ES+KNAE
Sbjct: 15  IVAKSGAESPKVPHAYIRTVQPWNYNKRLSQYGRLMVVRPVMAAPDKLSDKVAESVKNAE 74

Query: 61  ETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 117
           E CSD+P SGEC AAWDEVEELSAAASHARD+ K  D LEE+CKDNPE +ECRTYED
Sbjct: 75  EACSDNPASGECVAAWDEVEELSAAASHARDKKKSTDSLEEYCKDNPEADECRTYED 131

[Close]

BLAST of CmoCh08G004600 vs. TAIR10
Match: AT2G47400.1 (AT2G47400.1 CP12 domain-containing protein 1)

HSP 1 Score: 114.8 bits (286), Expect = 3.6e-26
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 1


Query: 11  KPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPESGE 70
           +P + VL   RL+Y  K  +  R+ VV   A +   ISEKV +SI+ A+ETC+DDP SGE
Sbjct: 19  RPVARVLGPVRLNYPWKFGSMKRMVVVK--ATSEGEISEKVEKSIQEAKETCADDPVSGE 78

Query: 71  CAAAWDEVEELSAAASHARDRLK--DADPLEEFCKDNPETEECRTYED 117
           C AAWDEVEELSAAASHARD+ K   +DPLEE+C DNPET+ECRTY++
Sbjct: 79  CVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124

[Close]

BLAST of CmoCh08G004600 vs. TAIR10
Match: AT3G62410.1 (AT3G62410.1 CP12 domain-containing protein 2)

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 1


Query: 30  TAGRISVVGPVAAAPDR-ISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHA 89
           T  R+  + P+ AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHA
Sbjct: 42  TTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 101

Query: 90  RDRLK--DADPLEEFCKDNPETEECRTYED 117
           RD+ K   +DPLEE+CKDNPET ECRTY++
Sbjct: 102 RDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of CmoCh08G004600 vs. TAIR10
Match: AT1G76560.1 (AT1G76560.1 CP12 domain-containing protein 3)

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 45  DRISEKVVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLK--DADPLEEFC 104
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 105 KDNPETEECRTYED 117
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]

BLAST of CmoCh08G004600 vs. NCBI nr
Match: gi|659101204|ref|XP_008451482.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 5.6e-45
Identity = 100/125 (80.00%), Postives = 108/125 (86.40%), Query Frame = 1


Query: 1   MAAISGTATA---------KPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAI+G++ A         K ESPV RS+RLSY  KRWT+GR+S VGPVAAAPDRISEKV
Sbjct: 1   MAAITGSSMAATKAVTDSPKIESPVHRSSRLSYPWKRWTSGRMSAVGPVAAAPDRISEKV 60

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 117
           VESIKNAE TCS+DP SGECAAAWDEVEELSAAASHARDRLKDADPLE+FCKDNPETEEC
Sbjct: 61  VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEEC 120

[Close]

BLAST of CmoCh08G004600 vs. NCBI nr
Match: gi|700189781|gb|KGN45014.1| (hypothetical protein Csa_7G407670 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = 1


Query: 1   MAAISGTATA---------KPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKV 60
           MAAI+G++ A         K E PVLRS+RLSY  KRWT+GR+S VG VAAAPDRISEKV
Sbjct: 57  MAAITGSSMAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKV 116

Query: 61  VESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEEC 117
           VESIKNAE TCS+DP SGECAAAWDEVEELSAAASHARDRL  +DPLE+FCKDNPETEEC
Sbjct: 117 VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEEC 176

[Close]

BLAST of CmoCh08G004600 vs. NCBI nr
Match: gi|778730422|ref|XP_004135995.2| (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 7.6e-42
Identity = 91/110 (82.73%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 7   TATAKPESPVLRSTRLSYQCKRWTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDP 66
           T + K E PVLRS+RLSY  KRWT+GR+S VG VAAAPDRISEKVVESIKNAE TCS+DP
Sbjct: 8   TDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKVVESIKNAEVTCSEDP 67

Query: 67  ESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 117
            SGECAAAWDEVEELSAAASHARDRL  +DPLE+FCKDNPETEECRTYED
Sbjct: 68  ASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEECRTYED 117

[Close]

BLAST of CmoCh08G004600 vs. NCBI nr
Match: gi|225425676|ref|XP_002275043.1| (PREDICTED: calvin cycle protein CP12-1, chloroplastic [Vitis vinifera])

HSP 1 Score: 142.5 bits (358), Expect = 4.6e-31
Identity = 79/112 (70.54%), Postives = 88/112 (78.57%), Query Frame = 1


Query: 8   ATAKPESPVLRSTRLSYQCKR---WTAGRISVVGPVAAAPDRISEKVVESIKNAEETCSD 67
           A   P+S  ++S  LS   KR   + AGR+ V  PVAAAPD ISEKVVESIKNAEE CSD
Sbjct: 18  AADSPKSQTIQSPWLSNPWKRPSRFGAGRMCV-RPVAAAPDSISEKVVESIKNAEEKCSD 77

Query: 68  DPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 117
           DP SGEC AAWDEVEELSAAASHARD+ K++DPLE +CKDNPE EECRTYED
Sbjct: 78  DPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDNPEDEECRTYED 128

[Close]

BLAST of CmoCh08G004600 vs. NCBI nr
Match: gi|218156192|dbj|BAH03328.1| (chloroplast protein 12 [Fagus crenata])

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-30
Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 1


Query: 12  PESPVLRSTRLSYQCKRWT----AGRISVVGPVAAAPDRISEKVVESIKNAEETCSDDPE 71
           P++  ++S  LS+  KR T    AGR   V PV+AAP++IS+KV ESIK+AEE C+ DP 
Sbjct: 22  PKAQTIKSPWLSHSWKRPTLFGYAGRSMQVRPVSAAPEKISDKVAESIKDAEEACAGDPA 81

Query: 72  SGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEECRTYED 117
           SGEC AAWDEVEELSAAASHARD+ K +DPLEE+CKDNPETEECRTYED
Sbjct: 82  SGECVAAWDEVEELSAAASHARDKKKGSDPLEEYCKDNPETEECRTYED 130

The following BLAST results are available for this feature:

BLAST of CmoCh08G004600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CP121_ARATH	6.4e-25	59.26	Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana GN=CP12-1 PE=...	[more]
CP122_ARATH	2.7e-23	64.44	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana GN=CP12-2 PE=...	[more]
CP123_ARATH	4.3e-13	51.35	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana GN=CP12-3 PE=...	[more]
CP12_CHLRE	2.1e-12	43.27	Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii GN=CP12 PE...	[more]

BLAST of CmoCh08G004600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K832_CUCSA	1.4e-42	76.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407670 PE=4 SV=1	[more]
F6HPR1_VITVI	3.2e-31	70.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02480 PE=4 SV=...	[more]
B7XB92_FAGCR	1.6e-30	66.97	Chloroplast protein 12 OS=Fagus crenata GN=CP12 PE=2 SV=1	[more]
M5W6P4_PRUPE	1.3e-29	77.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013259mg PE=4 SV=1	[more]
W9SLB7_9ROSA	1.1e-28	59.83	Uncharacterized protein OS=Morus notabilis GN=L484_000210 PE=4 SV=1	[more]

BLAST of CmoCh08G004600 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47400.1	3.6e-26	59.26	CP12 domain-containing protein 1	[more]
AT3G62410.1	1.5e-24	64.44	CP12 domain-containing protein 2	[more]
AT1G76560.1	2.4e-14	51.35	CP12 domain-containing protein 3	[more]

BLAST of CmoCh08G004600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101204\|ref\|XP_008451482.1\|	5.6e-45	80.00	PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis melo]	[more]
gi\|700189781\|gb\|KGN45014.1\|	2.0e-42	76.80	hypothetical protein Csa_7G407670 [Cucumis sativus]	[more]
gi\|778730422\|ref\|XP_004135995.2\|	7.6e-42	82.73	PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis sativus]	[more]
gi\|225425676\|ref\|XP_002275043.1\|	4.6e-31	70.54	PREDICTED: calvin cycle protein CP12-1, chloroplastic [Vitis vinifera]	[more]
gi\|218156192\|dbj\|BAH03328.1\|	2.3e-30	66.97	chloroplast protein 12 [Fagus crenata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003823	DUF_CP12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G004600.1	CmoCh08G004600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003823	Domain of unknown function CP12	PFAM	PF02672	CP12	coord: 47..115 score: 2.5
IPR003823	Domain of unknown function CP12	SMART	SM01093	CP12_2	coord: 47..116 score: 4.1
None	No IPR available	PANTHER	PTHR33921	FAMILY NOT NAMED	coord: 28..116 score: 7.2
None	No IPR available	PANTHER	PTHR33921:SF2	CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED	coord: 28..116 score: 7.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G004600	Cucsa.096730	Cucumber (Gy14) v1	cgycmoB0200
CmoCh08G004600	CmaCh08G004710	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G004600	CmaCh17G010320	Cucurbita maxima (Rimu)	cmacmoB374
CmoCh08G004600	Cla017360	Watermelon (97103) v1	cmowmB849
CmoCh08G004600	Csa4G003670	Cucumber (Chinese Long) v2	cmocuB879
CmoCh08G004600	MELO3C017917	Melon (DHL92) v3.5.1	cmomeB836
CmoCh08G004600	ClCG10G011400	Watermelon (Charleston Gray)	cmowcgB790
CmoCh08G004600	CSPI04G01230	Wild cucumber (PI 183967)	cmocpiB892
CmoCh08G004600	Lsi02G024770	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G004600	Lsi03G011110	Bottle gourd (USVL1VR-Ls)	cmolsiB817
CmoCh08G004600	Cp4.1LG03g05040	Cucurbita pepo (Zucchini)	cmocpeB861
CmoCh08G004600	Cp4.1LG12g06080	Cucurbita pepo (Zucchini)	cmocpeB839
CmoCh08G004600	Cp4.1LG17g07420	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G004600	MELO3C017917.2	Melon (DHL92) v3.6.1	cmomedB945
CmoCh08G004600	CsaV3_4G001210	Cucumber (Chinese Long) v3	cmocucB1044
CmoCh08G004600	Cla97C10G194250	Watermelon (97103) v2	cmowmbB881
CmoCh08G004600	Bhi11G001062	Wax gourd	cmowgoB1081
CmoCh08G004600	Carg11158	Silver-seed gourd	carcmoB1107
CmoCh08G004600	Carg07124	Silver-seed gourd	carcmoB0157
CmoCh08G004600	Carg13382	Silver-seed gourd	carcmoB0610

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G004600	CmoCh14G009560	Cucurbita moschata (Rifu)	cmocmoB229
CmoCh08G004600	CmoCh17G010090	Cucurbita moschata (Rifu)	cmocmoB319

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G004600	Silver-seed gourd	carcmoB1034
CmoCh08G004600	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G004600	Watermelon (97103) v2	cmowmbB916
CmoCh08G004600	Wax gourd	cmowgoB1126
CmoCh08G004600	Cucurbita moschata (Rifu)	cmocmoB378
CmoCh08G004600	Watermelon (97103) v1	cmowmB843
CmoCh08G004600	Cucumber (Gy14) v1	cgycmoB0610
CmoCh08G004600	Cucurbita maxima (Rimu)	cmacmoB276
CmoCh08G004600	Cucurbita maxima (Rimu)	cmacmoB490
CmoCh08G004600	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G004600	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G004600	Melon (DHL92) v3.5.1	cmomeB815
CmoCh08G004600	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G004600	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G004600	Melon (DHL92) v3.6.1	cmomedB919