Cp4.1LG17g06080 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g06080
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Maternal effect embryo arrest protein
Location	Cp4.1LG17 : 6958362 .. 6959038 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGTAAGTAAGCTCAATCTCTCTCTCTTTTAGTTTCGTTTCGTTTTTTCATCTCATTTCCCTCTGTTTCTGATCAGATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGAATTCCGAATCGCCTCCCCCTCCTCGCCATCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGATTGAAGCTTGCGATCAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGTTGGCCTCCGCCTTCGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

mRNA sequence

ATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGAATTCCGAATCGCCTCCCCCTCCTCGCCATCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGATTGAAGCTTGCGATCAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGTTGGCCTCCGCCTTCGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

Coding sequence (CDS)

ATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGAATTCCGAATCGCCTCCCCCTCCTCGCCATCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGATTGAAGCTTGCGATCAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGTTGGCCTCCGCCTTCGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

Protein sequence

MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYISTAIYAFLH

Homology

[Close]

BLAST of Cp4.1LG17g06080 vs. TrEMBL
Match: A0A0A0K8N3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375740 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.8e-83
Identity = 179/200 (89.50%), Postives = 188/200 (94.00%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPKD+ NGR R +E +    +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKDHFNGRSRAEEIQ---RTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAV+AL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVSALL 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           VLVSSALLVYISTAIYAFLH
Sbjct: 181 VLVSSALLVYISTAIYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. TrEMBL
Match: A0A061DNT8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_002644 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.7e-77
Identity = 170/204 (83.33%), Postives = 180/204 (88.24%), Query Frame = 1


Query: 1   MEESEAYPKD----NQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAV 60
           ME SE YPK+    N N RR        +P+S SSSSTTSVHVT LDGLVNVNSLFTIAV
Sbjct: 1   MEGSEEYPKEYYTNNGNPRR-------LTPTSSSSSSTTSVHVTALDGLVNVNSLFTIAV 60

Query: 61  FVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNS 120
           FVGLSLTTPGQHSLEN + CDA IDVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNS
Sbjct: 61  FVGLSLTTPGQHSLENRAPCDADIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNS 120

Query: 121 KDVDEAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV 180
           KDVDEAFRAHINLKVLRFGM+ SA GS+MGCLFLMLSMVNVI+IRLGMLSCGSKSAVHAV
Sbjct: 121 KDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSAVHAV 180

Query: 181 AALVVLVSSALLVYISTAIYAFLH 201
            ALV+LVSSALLVYISTA+YAFLH
Sbjct: 181 TALVILVSSALLVYISTAVYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. TrEMBL
Match: A0A0D2SEA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G160700 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.8e-75
Identity = 164/200 (82.00%), Postives = 179/200 (89.50%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ES  YPK+       G+  R+ S SS SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESGEYPKEYYTSN--GNPRRLTSTSS-SSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SL TPGQHSLEN + CDAGIDVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLATPGQHSLENRAPCDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGM+ SA GS+MGCLFLMLSMVNVI+IRLG+LSCGS+S++HA AALV
Sbjct: 121 EAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSQSSIHATAALV 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           +LVSSALLVYISTA+YAFLH
Sbjct: 181 ILVSSALLVYISTAVYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. TrEMBL
Match: A0A067LKL7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15080 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.2e-75
Identity = 166/200 (83.00%), Postives = 176/200 (88.00%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ES   P  N N        R+ S SS SS+STTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESPKDPYYNGNPSTG----RVPSTSSFSSTSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQ SLEN S CDAGIDVARKLLVFEVVSFSFFLFSSL+AQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQRSLENRSACDAGIDVARKLLVFEVVSFSFFLFSSLIAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGM+ SA GS+MGC+FLMLSMVNVI+IRLGMLSCGSK+AVHAV ALV
Sbjct: 121 EAFRAHINLKVLRFGMMGSAVGSVMGCIFLMLSMVNVIEIRLGMLSCGSKNAVHAVTALV 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           VLVSSALL+YISTAIYAFLH
Sbjct: 181 VLVSSALLIYISTAIYAFLH 196

[Close]

BLAST of Cp4.1LG17g06080 vs. TrEMBL
Match: A0A068U6N6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016501001 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.2e-75
Identity = 168/202 (83.17%), Postives = 180/202 (89.11%), Query Frame = 1


Query: 1   MEESEAYPKD--NQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFV 60
           MEESE YPKD  +Q  RR   +      SS +SSSTTSVHVT LDGLVNVNSLFTIAVFV
Sbjct: 1   MEESETYPKDYYSQEPRRTTSD----PTSSYASSSTTSVHVTALDGLVNVNSLFTIAVFV 60

Query: 61  GLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKD 120
           GLSLTTP QHSLENS+ CDAGIDVA+KLLVFEVVSFSFFLFSSL+AQGLKLAINLLNSKD
Sbjct: 61  GLSLTTPHQHSLENSA-CDAGIDVAKKLLVFEVVSFSFFLFSSLIAQGLKLAINLLNSKD 120

Query: 121 VDEAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAA 180
           VDEAFRAHI+L+VLRFGML SA GS+MGCLFLMLSMVNVI+IRLGMLSCGSKS VHAV A
Sbjct: 121 VDEAFRAHISLRVLRFGMLGSAIGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSTVHAVTA 180

Query: 181 LVVLVSSALLVYISTAIYAFLH 201
           L+VLVSSALLVYISTA+YAFLH
Sbjct: 181 LIVLVSSALLVYISTALYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. TAIR10
Match: AT3G07510.1 (AT3G07510.1 unknown protein)

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-71
Identity = 150/181 (82.87%), Postives = 162/181 (89.50%), Query Frame = 1


Query: 22  RIASP--SSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAG 81
           R+ SP  SS SS +TTSVHV+ LDGLVNVNSLFTIAVFVGLSL TPGQHSLE  S CDA 
Sbjct: 9   RMTSPEASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDAS 68

Query: 82  IDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLAS 141
            DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR+GM+AS
Sbjct: 69  ADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMAS 128

Query: 142 AFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYISTAIYAFL 201
           A GS+MGCLFLMLSMVNVIQIRLG+LSCGSKSA  AVA LV LVSSALL+YISTAIYAF 
Sbjct: 129 AVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFW 188

[Close]

BLAST of Cp4.1LG17g06080 vs. TAIR10
Match: AT2G01580.1 (AT2G01580.1 unknown protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-52
Identity = 116/198 (58.59%), Postives = 149/198 (75.25%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M +S+     NQN           S +S S++STTSVHVT LDG+V+ NSLFT+AVFVG+
Sbjct: 1   MADSDIETSSNQNSN---------SNTSHSTTSTTSVHVTALDGIVSANSLFTVAVFVGI 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           S   P   +L + + C AG DV R L+VFEV+SF+FFLFSSLVAQG+KLAINLLNSK+ D
Sbjct: 61  SFDQPSDLTLTDRTECSAGRDVERDLVVFEVISFAFFLFSSLVAQGMKLAINLLNSKETD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           E F+A+IN  VLRFG++ +A GS++GC+FL+LS+V+VIQ+RLG+LSCG+  A+H V  LV
Sbjct: 121 EVFKANINRDVLRFGVVGAAGGSILGCVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLV 180

Query: 181 VLVSSALLVYISTAIYAF 199
           VLVSSAL VYI T  Y+F
Sbjct: 181 VLVSSALSVYIFTVFYSF 189

[Close]

BLAST of Cp4.1LG17g06080 vs. TAIR10
Match: AT5G05950.1 (AT5G05950.1 maternal effect embryo arrest 60)

HSP 1 Score: 131.7 bits (330), Expect = 4.9e-31
Identity = 82/172 (47.67%), Postives = 111/172 (64.53%), Query Frame = 1


Query: 34  TTSVHVTTLDGLVNVNSLFTIAVFVGLSLT-TPGQHSLENSSVCDAGIDVARKLLVFEVV 93
           TTS+H+T LDG+VNVNSLFT+AVF+GL+   T   +SL     C     +A  L+ F V 
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVY 61

Query: 94  SFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRFGMLASAFGSMMGC 153
           SF+ FLFSSL+A GLK A+ L  +     + R      ++N   LRFGM+ S  GS+ GC
Sbjct: 62  SFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGC 121

Query: 154 LFLMLSMVNVIQIRLGMLSCGSKSAVH-AVAALVVLVSSALLVYISTAIYAF 199
            FLML+++NV+QI+LG L CG+    + AV  LV+LV SAL +Y+S  +YAF
Sbjct: 122 GFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of Cp4.1LG17g06080 vs. TAIR10
Match: AT3G46890.1 (AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1))

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 80/191 (41.88%), Postives = 115/191 (60.21%), Query Frame = 1


Query: 34  TTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSS-----------VCDAGIDV 93
           TT +HVT +DG+VNVNSLF++A+F+GL  TT G  +   SS           +   G  +
Sbjct: 18  TTLIHVTAIDGIVNVNSLFSLALFLGL--TTSGNITFPVSSSASENHHLRRCISAKGPAL 77

Query: 94  ARKLLVFEVVSFSFFLFSSLVAQGLKLAINLL----NSKDVDEAFRA------HINLKVL 153
           A +L+   V SFS FLFSSL+A  LK AI       N   ++E  R        +NL  L
Sbjct: 78  AERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAAL 137

Query: 154 RFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAA---LVVLVSSALLV 201
           R G++AS   S++GC FL +++V+++QI+LG L C  K + HA+AA   LVVLV SAL++
Sbjct: 138 RVGIVASCVASVLGCGFLTMALVDLVQIKLGPLEC--KRSFHALAAIVPLVVLVPSALII 197

[Close]

BLAST of Cp4.1LG17g06080 vs. NCBI nr
Match: gi|659100744|ref|XP_008451246.1| (PREDICTED: uncharacterized protein LOC103492593 [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83
Identity = 180/200 (90.00%), Postives = 188/200 (94.00%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPKD+ NGR R +E +    +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKDHFNGRSRREEIQ---RTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAVAAL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALL 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           VLVSSALLVYISTAIYAFLH
Sbjct: 181 VLVSSALLVYISTAIYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. NCBI nr
Match: gi|449462445|ref|XP_004148951.1| (PREDICTED: uncharacterized protein LOC101219594 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 4.0e-83
Identity = 179/200 (89.50%), Postives = 188/200 (94.00%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESEAYPKD+ NGR R +E +    +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEAYPKDHFNGRSRAEEIQ---RTSSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMV+VIQIRLGMLSCGSKSAVHAV+AL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAIGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVSALL 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           VLVSSALLVYISTAIYAFLH
Sbjct: 181 VLVSSALLVYISTAIYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. NCBI nr
Match: gi|590713141|ref|XP_007049559.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 295.0 bits (754), Expect = 9.6e-77
Identity = 170/204 (83.33%), Postives = 180/204 (88.24%), Query Frame = 1


Query: 1   MEESEAYPKD----NQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAV 60
           ME SE YPK+    N N RR        +P+S SSSSTTSVHVT LDGLVNVNSLFTIAV
Sbjct: 1   MEGSEEYPKEYYTNNGNPRR-------LTPTSSSSSSTTSVHVTALDGLVNVNSLFTIAV 60

Query: 61  FVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNS 120
           FVGLSLTTPGQHSLEN + CDA IDVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNS
Sbjct: 61  FVGLSLTTPGQHSLENRAPCDADIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNS 120

Query: 121 KDVDEAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV 180
           KDVDEAFRAHINLKVLRFGM+ SA GS+MGCLFLMLSMVNVI+IRLGMLSCGSKSAVHAV
Sbjct: 121 KDVDEAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGMLSCGSKSAVHAV 180

Query: 181 AALVVLVSSALLVYISTAIYAFLH 201
            ALV+LVSSALLVYISTA+YAFLH
Sbjct: 181 TALVILVSSALLVYISTAVYAFLH 197

[Close]

BLAST of Cp4.1LG17g06080 vs. NCBI nr
Match: gi|470107575|ref|XP_004290120.1| (PREDICTED: uncharacterized protein LOC101292949 [Fragaria vesca subsp. vesca])

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-75
Identity = 166/200 (83.00%), Postives = 178/200 (89.00%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ES+ YPK+   G++R         S  SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESDEYPKEYYPGQQR-------VTSMSSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLT PGQ SLEN + CDAG DVA+KLLVFEVVSFSFFLFSSL+AQGLKLAINLLNSKDVD
Sbjct: 61  SLTVPGQKSLENRTACDAGNDVAKKLLVFEVVSFSFFLFSSLIAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGML SAFGS+MGCLFLMLSMVNVIQIRLGMLSCGSKSAVH+VAALV
Sbjct: 121 EAFRAHINLKVLRFGMLGSAFGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHSVAALV 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           VLVSSALLVY++TAIYAFLH
Sbjct: 181 VLVSSALLVYLTTAIYAFLH 193

[Close]

BLAST of Cp4.1LG17g06080 vs. NCBI nr
Match: gi|823189749|ref|XP_012490933.1| (PREDICTED: uncharacterized protein LOC105803353 [Gossypium raimondii])

HSP 1 Score: 289.7 bits (740), Expect = 4.0e-75
Identity = 164/200 (82.00%), Postives = 179/200 (89.50%), Query Frame = 1


Query: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ES  YPK+       G+  R+ S SS SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESGEYPKEYYTSN--GNPRRLTSTSS-SSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SL TPGQHSLEN + CDAGIDVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLATPGQHSLENRAPCDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGM+ SA GS+MGCLFLMLSMVNVI+IRLG+LSCGS+S++HA AALV
Sbjct: 121 EAFRAHINLKVLRFGMMGSAVGSVMGCLFLMLSMVNVIEIRLGLLSCGSQSSIHATAALV 180

Query: 181 VLVSSALLVYISTAIYAFLH 201
           +LVSSALLVYISTA+YAFLH
Sbjct: 181 ILVSSALLVYISTAVYAFLH 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g06080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g06080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8N3_CUCSA	2.8e-83	89.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375740 PE=4 SV=1	[more]
A0A061DNT8_THECC	6.7e-77	83.33	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_002644 PE=4 SV=1	[more]
A0A0D2SEA7_GOSRA	2.8e-75	82.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G160700 PE=4 SV=1	[more]
A0A067LKL7_JATCU	6.2e-75	83.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15080 PE=4 SV=1	[more]
A0A068U6N6_COFCA	6.2e-75	83.17	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016501001 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g06080 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07510.1	2.9e-71	82.87	unknown protein	[more]
AT2G01580.1	1.3e-52	58.59	unknown protein	[more]
AT5G05950.1	4.9e-31	47.67	maternal effect embryo arrest 60	[more]
AT3G46890.1	2.6e-24	41.88	BEST Arabidopsis thaliana protein match is: maternal effect embryo a...	[more]

BLAST of Cp4.1LG17g06080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100744\|ref\|XP_008451246.1\|	3.1e-83	90.00	PREDICTED: uncharacterized protein LOC103492593 [Cucumis melo]	[more]
gi\|449462445\|ref\|XP_004148951.1\|	4.0e-83	89.50	PREDICTED: uncharacterized protein LOC101219594 [Cucumis sativus]	[more]
gi\|590713141\|ref\|XP_007049559.1\|	9.6e-77	83.33	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|470107575\|ref\|XP_004290120.1\|	1.1e-75	83.00	PREDICTED: uncharacterized protein LOC101292949 [Fragaria vesca subsp. vesca]	[more]
gi\|823189749\|ref\|XP_012490933.1\|	4.0e-75	82.00	PREDICTED: uncharacterized protein LOC105803353 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g06080.1	Cp4.1LG17g06080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430	FAMILY NOT NAMED	coord: 1..200 score: 2.1E
None	No IPR available	PANTHER	PTHR33430:SF4	SUBFAMILY NOT NAMED	coord: 1..200 score: 2.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g06080	Cucsa.388440	Cucumber (Gy14) v1	cgycpeB1032
Cp4.1LG17g06080	CmaCh17G013440	Cucurbita maxima (Rimu)	cmacpeB392
Cp4.1LG17g06080	CmaCh08G002900	Cucurbita maxima (Rimu)	cmacpeB917
Cp4.1LG17g06080	CmoCh08G002870	Cucurbita moschata (Rifu)	cmocpeB853
Cp4.1LG17g06080	CmoCh17G013070	Cucurbita moschata (Rifu)	cmocpeB355
Cp4.1LG17g06080	Cla014837	Watermelon (97103) v1	cpewmB311
Cp4.1LG17g06080	Csa7G375740	Cucumber (Chinese Long) v2	cpecuB344
Cp4.1LG17g06080	MELO3C015727	Melon (DHL92) v3.5.1	cpemeB300
Cp4.1LG17g06080	ClCG09G007830	Watermelon (Charleston Gray)	cpewcgB280
Cp4.1LG17g06080	CSPI07G15520	Wild cucumber (PI 183967)	cpecpiB345
Cp4.1LG17g06080	Lsi02G022060	Bottle gourd (USVL1VR-Ls)	cpelsiB262
Cp4.1LG17g06080	MELO3C015727.2	Melon (DHL92) v3.6.1	cpemedB348
Cp4.1LG17g06080	CsaV3_7G027300	Cucumber (Chinese Long) v3	cpecucB0423
Cp4.1LG17g06080	Bhi09G000973	Wax gourd	cpewgoB0416
Cp4.1LG17g06080	CsGy7G014020	Cucumber (Gy14) v2	cgybcpeB932
Cp4.1LG17g06080	Carg05113	Silver-seed gourd	carcpeB0126
Cp4.1LG17g06080	Carg11518	Silver-seed gourd	carcpeB0023

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g06080	Cp4.1LG12g10280	Cucurbita pepo (Zucchini)	cpecpeB173

The following block(s) are covering this gene:

None