Carg05113 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05113
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Maternal effect embryo arrest protein
Location	Cucurbita_argyrosperma_scaffold_060 : 1459917 .. 1460771 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTTGCATTTTCCAATAATCCCTAAAACAAACCTTCTTGCCGGAAATCTTCTCCGACCGCATCTCAGATTCCGCCATGGAAGAGTAAGTAAGCTCAATCTCTCTCTCTCTTCGTTTCGTTTCGTTTTTTCATCTCATTTCCCTCTGTTTCTGATCAGATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGATTTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTCCTGTTCTCGTCTCTCGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGCTGGCCTCCGCCTCTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTCGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTATGCATTGATTCATGATGATGATGATGATATACACGCTATGTGTTCTCAATTTGAGTTTGCTCAATGTTAAAAGACTTCATGAACTCAAAGATTAATTTACTTCGCCT

mRNA sequence

TTTCTTTTGCATTTTCCAATAATCCCTAAAACAAACCTTCTTGCCGGAAATCTTCTCCGACCGCATCTCAGATTCCGCCATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGATTTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTCCTGTTCTCGTCTCTCGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGCTGGCCTCCGCCTCTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTCGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTATGCATTGATTCATGATGATGATGATGATATACACGCTATGTGTTCTCAATTTGAGTTTGCTCAATGTTAAAAGACTTCATGAACTCAAAGATTAATTTACTTCGCCT

Coding sequence (CDS)

ATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGATTTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTCAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCATTGACAACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTCCTGTTCTCGTCTCTCGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCATTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGCTGGCCTCCGCCTCTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTCGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTCGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTATGCATTGA

Protein sequence

MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYISTAIYAFMH

Homology

[Close]

BLAST of Carg05113 vs. NCBI nr
Match: XP_022960345.1 (uncharacterized protein LOC111461098 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 5.2e-95
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]

BLAST of Carg05113 vs. NCBI nr
Match: XP_023004749.1 (uncharacterized protein LOC111497959 [Cucurbita maxima])

HSP 1 Score: 356.7 bits (914), Expect = 5.2e-95
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASALGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]

BLAST of Carg05113 vs. NCBI nr
Match: XP_023514650.1 (uncharacterized protein LOC111778883 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.8 bits (909), Expect = 2.0e-94
Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           MEESEAYPKDNQNGRRRGD+FRIAS SSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL
Sbjct: 1   MEESEAYPKDNQNGRRRGDEFRIASPSSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGMLASA GSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV
Sbjct: 121 EAFRAHINLKVLRFGMLASAFGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVYISTAIYAF+H
Sbjct: 181 VLVSSALLVYISTAIYAFLH 200

[Close]

BLAST of Carg05113 vs. NCBI nr
Match: XP_022991542.1 (uncharacterized protein LOC111488123 isoform X3 [Cucurbita maxima])

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 177/200 (88.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M ESE YPK+  N R R D  R +SA   SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 76  MNESETYPKEYYNDRSRADGIRTSSAL--SSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 135

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSL+NSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 136 SLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 195

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAAL+
Sbjct: 196 EAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALL 255

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLV+SALLVYISTAIYAF+H
Sbjct: 256 VLVTSALLVYISTAIYAFLH 273

[Close]

BLAST of Carg05113 vs. NCBI nr
Match: XP_022953364.1 (uncharacterized protein LOC111455936 isoform X3 [Cucurbita moschata])

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 176/200 (88.00%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESE YPK+  N R R D  R +SA   SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSAL--SSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSL+NSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLR GMLASA GS+MGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV AL+
Sbjct: 121 EAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLV+SALLVYISTAIYAF+H
Sbjct: 181 VLVTSALLVYISTAIYAFLH 198

[Close]

BLAST of Carg05113 vs. TAIR10
Match: AT3G07510.1 (unknown protein)

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-71
Identity = 150/187 (80.21%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 14  GRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENS 73
           G   G       ASS SS +TTSVHV+ LDGLVNVNSLFTIAVFVGLSL TPGQHSLE  
Sbjct: 3   GAENGVRMTSPEASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQR 62

Query: 74  SVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLR 133
           S CDA  DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR
Sbjct: 63  SSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLR 122

Query: 134 FGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYIST 193
           +GM+ASA GS+MGCLFLMLSMVNVIQIRLG+LSCGSKSA  AVA LV LVSSALL+YIST
Sbjct: 123 WGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYIST 182

Query: 194 AIYAFMH 201
           AIYAF H
Sbjct: 183 AIYAFWH 189

[Close]

BLAST of Carg05113 vs. TAIR10
Match: AT2G01580.1 (unknown protein)

HSP 1 Score: 189.5 bits (480), Expect = 2.0e-48
Identity = 101/159 (63.52%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 40  TTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLF 99
           T LDG+V+ NSLFT+AVFVG+S   P   +L + + C AG DV R L+VFEV+SF+FFLF
Sbjct: 31  TALDGIVSANSLFTVAVFVGISFDQPSDLTLTDRTECSAGRDVERDLVVFEVISFAFFLF 90

Query: 100 SSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQ 159
           SSLVAQG+KLAINLLNSK+ DE F+A+IN  VLRFG++ +A GS++GC+FL+LS+V+VIQ
Sbjct: 91  SSLVAQGMKLAINLLNSKETDEVFKANINRDVLRFGVVGAAGGSILGCVFLLLSIVDVIQ 150

Query: 160 IRLGMLSCGSKSAVHAVAALVVLVSSALLVYISTAIYAF 199
           +RLG+LSCG+  A+H V  LVVLVSSAL VYI T  Y+F
Sbjct: 151 LRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189

[Close]

BLAST of Carg05113 vs. TAIR10
Match: AT5G05950.1 (maternal effect embryo arrest 60)

HSP 1 Score: 131.3 bits (329), Expect = 6.5e-31
Identity = 82/172 (47.67%), Postives = 111/172 (64.53%), Query Frame = 0


Query: 34  TTSVHVTTLDGLVNVNSLFTIAVFVGLSLT-TPGQHSLENSSVCDAGIDVARKLLVFEVV 93
           TTS+H+T LDG+VNVNSLFT+AVF+GL+   T   +SL     C     +A  L+ F V 
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVY 61

Query: 94  SFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRFGMLASASGSMMGC 153
           SF+ FLFSSL+A GLK A+ L  +     + R      ++N   LRFGM+ S  GS+ GC
Sbjct: 62  SFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGC 121

Query: 154 LFLMLSMVNVIQIRLGMLSCGSKSAVH-AVAALVVLVSSALLVYISTAIYAF 199
            FLML+++NV+QI+LG L CG+    + AV  LV+LV SAL +Y+S  +YAF
Sbjct: 122 GFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of Carg05113 vs. TAIR10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1))

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 34  TTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSS-----------VCDAGIDV 93
           TT +HVT +DG+VNVNSLF++A+F+G  LTT G  +   SS           +   G  +
Sbjct: 18  TTLIHVTAIDGIVNVNSLFSLALFLG--LTTSGNITFPVSSSASENHHLRRCISAKGPAL 77

Query: 94  ARKLLVFEVVSFSFFLFSSLVAQGLKLAI----NLLNSKDVDEAFR------AHINLKVL 153
           A +L+   V SFS FLFSSL+A  LK AI       N   ++E  R        +NL  L
Sbjct: 78  AERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAAL 137

Query: 154 RFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVL 183
           R G++AS   S++GC FL +++V+++QI+LG L C  K + HA+AA+V L
Sbjct: 138 RVGIVASCVASVLGCGFLTMALVDLVQIKLGPLEC--KRSFHALAAIVPL 183

[Close]

BLAST of Carg05113 vs. TrEMBL
Match: tr|A0A067LKL7|A0A067LKL7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15080 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-74
Identity = 165/200 (82.50%), Postives = 176/200 (88.00%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ES   P  N N        R+ S SS SS+STTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESPKDPYYNGN----PSTGRVPSTSSFSSTSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQ SLEN S CDAGIDVARKLLVFEVVSFSFFLFSSL+AQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQRSLENRSACDAGIDVARKLLVFEVVSFSFFLFSSLIAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGM+ SA GS+MGC+FLMLSMVNVI+IRLGMLSCGSK+AVHAV ALV
Sbjct: 121 EAFRAHINLKVLRFGMMGSAVGSVMGCIFLMLSMVNVIEIRLGMLSCGSKNAVHAVTALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALL+YISTAIYAF+H
Sbjct: 181 VLVSSALLIYISTAIYAFLH 196

[Close]

BLAST of Carg05113 vs. TrEMBL
Match: tr|A0A2P5CY17|A0A2P5CY17_9ROSA (Maternal effect embryo arrest protein OS=Trema orientalis OX=63057 GN=TorRG33x02_269380 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.4e-74
Identity = 166/200 (83.00%), Postives = 179/200 (89.50%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESE YPKD +      +  R+ S  S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEEYPKDYR------ESGRVTSIPS-SSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQ SLEN + CDAGIDVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQQSLENRA-CDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGM+ SA GS+MGC+FLMLSMVNVI+IRLGMLSCGSKSAVHAVA L+
Sbjct: 121 EAFRAHINLKVLRFGMMGSAVGSVMGCVFLMLSMVNVIEIRLGMLSCGSKSAVHAVATLL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSAL+VYISTAIYAF+H
Sbjct: 181 VLVSSALVVYISTAIYAFLH 192

[Close]

BLAST of Carg05113 vs. TrEMBL
Match: tr|A0A2P5DPC3|A0A2P5DPC3_PARAD (Maternal effect embryo arrest protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_044850 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.4e-74
Identity = 166/200 (83.00%), Postives = 178/200 (89.00%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M+ESE YPKD +      D  R+ S  S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MDESEEYPKDYR------DSGRVTSIPS-SSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQ SLEN + CDAGIDVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQQSLENRA-CDAGIDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHINLKVLRFGM+ SA GS+MGC+FLMLSMVNVI+IRLGMLSCGSKS VHAVA L+
Sbjct: 121 EAFRAHINLKVLRFGMMGSAVGSVMGCVFLMLSMVNVIEIRLGMLSCGSKSTVHAVATLL 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSAL+VYISTAIYAF+H
Sbjct: 181 VLVSSALVVYISTAIYAFLH 192

[Close]

BLAST of Carg05113 vs. TrEMBL
Match: tr|A0A2P6PTS5|A0A2P6PTS5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0282541 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 9.7e-74
Identity = 161/200 (80.50%), Postives = 176/200 (88.00%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M ES+ YPK++  G+           +S SSSSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MNESDEYPKEHYGGQ-----------TSMSSSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLT PGQ SLEN + CDAG DVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSK+VD
Sbjct: 61  SLTVPGQKSLENRTACDAGNDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKEVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           EAFRAHIN+KVLRFGML SA GS+MGC+FLMLSMVNVIQIRLGMLSCGSKSAVH+VAAL+
Sbjct: 121 EAFRAHINIKVLRFGMLGSAFGSVMGCVFLMLSMVNVIQIRLGMLSCGSKSAVHSVAALI 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLVSSALLVY+STAIYAF+H
Sbjct: 181 VLVSSALLVYLSTAIYAFLH 189

[Close]

BLAST of Carg05113 vs. TrEMBL
Match: tr|A0A2G9GDC5|A0A2G9GDC5_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24184 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-73
Identity = 162/200 (81.00%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MEESEAYPKDNQNGRRRGDDFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGL 60
           M ESE YPK+  +          +   S S SSTTSVHVT LDGLVNVNSLFTIAVFVGL
Sbjct: 1   MAESENYPKEPYS-------IEPSRTYSGSGSSTTSVHVTALDGLVNVNSLFTIAVFVGL 60

Query: 61  SLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120
           SLTTPGQHSLEN S CDAG+DVA+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD
Sbjct: 61  SLTTPGQHSLENPSACDAGLDVAKKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVD 120

Query: 121 EAFRAHINLKVLRFGMLASASGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALV 180
           E FRAHINLKVLRFGMLASA GS++GCLFLMLSMVNVI+IRLG LSCGSKS VHAV ALV
Sbjct: 121 EIFRAHINLKVLRFGMLASAIGSVLGCLFLMLSMVNVIEIRLGKLSCGSKSTVHAVTALV 180

Query: 181 VLVSSALLVYISTAIYAFMH 201
           VLV+SALLVYISTA+YAF+H
Sbjct: 181 VLVASALLVYISTAVYAFLH 193

The following BLAST results are available for this feature:

BLAST of Carg05113 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960345.1	5.2e-95	98.50	uncharacterized protein LOC111461098 [Cucurbita moschata]	[more]
XP_023004749.1	5.2e-95	98.50	uncharacterized protein LOC111497959 [Cucurbita maxima]	[more]
XP_023514650.1	2.0e-94	98.00	uncharacterized protein LOC111778883 [Cucurbita pepo subsp. pepo]	[more]
XP_022991542.1	1.5e-81	88.50	uncharacterized protein LOC111488123 isoform X3 [Cucurbita maxima]	[more]
XP_022953364.1	2.5e-81	88.00	uncharacterized protein LOC111455936 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg05113 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07510.1	2.9e-71	80.21	unknown protein	[more]
AT2G01580.1	2.0e-48	63.52	unknown protein	[more]
AT5G05950.1	6.5e-31	47.67	maternal effect embryo arrest 60	[more]
AT3G46890.1	1.8e-20	41.18	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]

BLAST of Carg05113 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05113 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A067LKL7\|A0A067LKL7_JATCU	1.2e-74	82.50	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15080 PE=4 SV=1	[more]
tr\|A0A2P5CY17\|A0A2P5CY17_9ROSA	4.4e-74	83.00	Maternal effect embryo arrest protein OS=Trema orientalis OX=63057 GN=TorRG33x02...	[more]
tr\|A0A2P5DPC3\|A0A2P5DPC3_PARAD	4.4e-74	83.00	Maternal effect embryo arrest protein OS=Parasponia andersonii OX=3476 GN=PanWU0...	[more]
tr\|A0A2P6PTS5\|A0A2P6PTS5_ROSCH	9.7e-74	80.50	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0282541 PE=4...	[more]
tr\|A0A2G9GDC5\|A0A2G9GDC5_9LAMI	1.3e-73	81.00	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24184 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05113-RA	Carg05113-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR33430:SF4	SUBFAMILY NOT NAMED	coord: 25..200
None	No IPR available	PANTHER	PTHR33430	FAMILY NOT NAMED	coord: 25..200

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05113	Cla014837	Watermelon (97103) v1	carwmB0079
Carg05113	Csa7G375740	Cucumber (Chinese Long) v2	carcuB0095
Carg05113	MELO3C015727	Melon (DHL92) v3.5.1	carmeB0084
Carg05113	ClCG09G007830	Watermelon (Charleston Gray)	carwcgB0080
Carg05113	CSPI07G15520	Wild cucumber (PI 183967)	carcpiB0099
Carg05113	Cucsa.388440	Cucumber (Gy14) v1	carcgyB0104
Carg05113	CmaCh08G002900	Cucurbita maxima (Rimu)	carcmaB0112
Carg05113	CmaCh17G013440	Cucurbita maxima (Rimu)	carcmaB0104
Carg05113	CmoCh08G002870	Cucurbita moschata (Rifu)	carcmoB0119
Carg05113	CmoCh17G013070	Cucurbita moschata (Rifu)	carcmoB0112
Carg05113	Lsi02G022060	Bottle gourd (USVL1VR-Ls)	carlsiB074
Carg05113	Cp4.1LG12g10280	Cucurbita pepo (Zucchini)	carcpeB0116
Carg05113	Cp4.1LG17g06080	Cucurbita pepo (Zucchini)	carcpeB0126
Carg05113	CsGy7G014020	Cucumber (Gy14) v2	carcgybB0095
Carg05113	MELO3C015727.2	Melon (DHL92) v3.6.1	carmedB0085
Carg05113	CsaV3_7G027300	Cucumber (Chinese Long) v3	carcucB0102
Carg05113	Cla97C09G170430	Watermelon (97103) v2	carwmbB0085
Carg05113	Bhi09G000973	Wax gourd	carwgoB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05113	Carg11518	Silver-seed gourd	carcarB009

The following block(s) are covering this gene:

None