CmaCh08G002900 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCGTTTTCCAATAATCCCCAAAACAAACCTTCTCGCCGGAAAATCTTCTCCGACCGCATCTCAGAGTCCGCCATGGAAGAGTAAGTAAGCTCAATCTCTCTCTCTTTTCGTTTCGTTTCGTTTCGTTTTTTCATCTCATTTCCCTCTGTTTCTGATCAGATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGAATTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTGAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCCTTGACGACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGTTGGCCTCCGCCCTTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTGGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGATTCATGATGATGATGATTATGATATACACGCTAGGTGTTCTCAATTTGAGTGGCTCAATGTTAAAGACTTCATGAACTCAAAGATTAATTTACTTGACTTATCGGCTTTTAAATTTGTGGGATTTAGTAATCATTTTGATTCACCATTGTCACGGCAATGATTTTTGATCGGTGTACTCATTAGTTAGAAGTTCATGATGAACACGAATGAGCGAGAAGAATCTCTAGACGAG TTGCGTTTTCCAATAATCCCCAAAACAAACCTTCTCGCCGGAAAATCTTCTCCGACCGCATCTCAGAGTCCGCCATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGAATTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTGAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCCTTGACGACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGTTGGCCTCCGCCCTTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTGGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGATTCATGATGATGATGATTATGATATACACGCTAGGTGTTCTCAATTTGAGTGGCTCAATGTTAAAGACTTCATGAACTCAAAGATTAATTTACTTGACTTATCGGCTTTTAAATTTGTGGGATTTAGTAATCATTTTGATTCACCATTGTCACGGCAATGATTTTTGATCGGTGTACTCATTAGTTAGAAGTTCATGATGAACACGAATGAGCGAGAAGAATCTCTAGACGAG ATGGAAGAATCCGAGGCGTATCCAAAAGACAATCAGAATGGCCGGAGAAGAGGCGATGAATTCCGAATCGCCTCCGCCTCCTCGCCGTCGTCTTCCTCCACCACCAGCGTCCACGTTACGACACTCGACGGACTCGTGAATGTGAATTCGCTTTTCACCATCGCGGTGTTTGTAGGGCTTTCCTTGACGACGCCAGGGCAGCATAGTCTCGAGAATTCCTCGGTCTGCGACGCCGGCATTGATGTTGCTCGGAAGCTTCTGGTGTTTGAGGTGGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGATTGAAGCTTGCGATTAACCTTTTGAACAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATTTGAAGGTGCTCAGATTTGGGATGTTGGCCTCCGCCCTTGGATCCATGATGGGCTGCTTGTTCCTGATGCTGTCGATGGTGAATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCTGTGGCCGCGCTTGTTGTTCTGGTTTCCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA MEESEAYPKDNQNGRRRGDEFRIASASSPSSSSTTSVHVTTLDGLVNVNSLFTIAVFVGLSLTTPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLASALGSMMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALVVLVSSALLVYISTAIYAFLH
BLAST of CmaCh08G002900 vs. TrEMBL
Match: A0A0A0K8N3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375740 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.1e-83 Identity = 179/200 (89.50%), Postives = 189/200 (94.50%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TrEMBL
Match: A0A061DNT8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_002644 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 4.3e-76 Identity = 168/200 (84.00%), Postives = 179/200 (89.50%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TrEMBL
Match: A0A0D2SEA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G160700 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.8e-75 Identity = 164/200 (82.00%), Postives = 180/200 (90.00%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TrEMBL
Match: A0A067LKL7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15080 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 4.8e-75 Identity = 166/200 (83.00%), Postives = 177/200 (88.50%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TrEMBL
Match: A0A068U6N6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016501001 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 4.8e-75 Identity = 168/202 (83.17%), Postives = 181/202 (89.60%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TAIR10
Match: AT3G07510.1 (AT3G07510.1 unknown protein) HSP 1 Score: 266.2 bits (679), Expect = 1.7e-71 Identity = 150/187 (80.21%), Postives = 162/187 (86.63%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TAIR10
Match: AT2G01580.1 (AT2G01580.1 unknown protein) HSP 1 Score: 202.2 bits (513), Expect = 3.0e-52 Identity = 116/198 (58.59%), Postives = 149/198 (75.25%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TAIR10
Match: AT5G05950.1 (AT5G05950.1 maternal effect embryo arrest 60) HSP 1 Score: 132.5 bits (332), Expect = 2.9e-31 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1
BLAST of CmaCh08G002900 vs. TAIR10
Match: AT3G46890.1 (AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24 Identity = 80/191 (41.88%), Postives = 116/191 (60.73%), Query Frame = 1
BLAST of CmaCh08G002900 vs. NCBI nr
Match: gi|659100744|ref|XP_008451246.1| (PREDICTED: uncharacterized protein LOC103492593 [Cucumis melo]) HSP 1 Score: 317.0 bits (811), Expect = 2.4e-83 Identity = 180/200 (90.00%), Postives = 189/200 (94.50%), Query Frame = 1
BLAST of CmaCh08G002900 vs. NCBI nr
Match: gi|449462445|ref|XP_004148951.1| (PREDICTED: uncharacterized protein LOC101219594 [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83 Identity = 179/200 (89.50%), Postives = 189/200 (94.50%), Query Frame = 1
BLAST of CmaCh08G002900 vs. NCBI nr
Match: gi|590713141|ref|XP_007049559.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 292.4 bits (747), Expect = 6.2e-76 Identity = 168/200 (84.00%), Postives = 179/200 (89.50%), Query Frame = 1
BLAST of CmaCh08G002900 vs. NCBI nr
Match: gi|823189749|ref|XP_012490933.1| (PREDICTED: uncharacterized protein LOC105803353 [Gossypium raimondii]) HSP 1 Score: 289.7 bits (740), Expect = 4.0e-75 Identity = 164/200 (82.00%), Postives = 180/200 (90.00%), Query Frame = 1
BLAST of CmaCh08G002900 vs. NCBI nr
Match: gi|802546376|ref|XP_012084606.1| (PREDICTED: uncharacterized protein LOC105643970 isoform X1 [Jatropha curcas]) HSP 1 Score: 288.9 bits (738), Expect = 6.9e-75 Identity = 166/200 (83.00%), Postives = 177/200 (88.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |