Cp4.1LG17g03080 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g03080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description60S ribosomal protein L37a
LocationCp4.1LG17 : 1738957 .. 1740038 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGATGGTTGGATCCGTAACTTTCTCATTACCTTTTATGATGTTGTGTAGACAAAGAGAACCAAGAAGGCTGGCATCGTTGGCAAGTATGGTATGTGATTCTATCATTCTTATTCCCAAGATAAGATTGAACTAAAAATGTTGGGAGAGGGAATATATATAGGATTCTGTTTCTCATAAAAAAAGATTTTGTATAGGATTTTTTGGAATTTGGTGAAAGATTTTGATAGAAAAGAATATTATGATGGTTGCATTGATAGAGAGATACTCTTCACTGGTCTGGAATTTACATTAGTTGATCAAGCATTTTTCTTGTTTGCTAGATGACAACCCTCCCCTTTCTTTGTCTTACTCTTAATTTTATATATAACATATTAAAAATGGTTTCTTGATGATTACAGGCACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGTGGGAAGGTACAACATTGTTTAAAACGCTCGTTTTGGCGTCCTTGTGAACGTTTATTTGAATCTATAAATGTGAAACATTTGAGTAATGTACAATCTGTCCTTCCAGTACGCGGTGAAGAGGAAGGCTGTGGGAATATGGGGTTGCAAAGATTGCGGTAAAGTGAAAGCAGGAGGGGCTTACACGTTGAAGTAAGGATGTTTGAGATTGCTCTGTTTGTATGTCTTTTTTAATCCCAAATTTGTTTCAATGTTTTGACTTTGTATGTTGTTCGTTAATGACAGTACTGCAAGTGCCGTCACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAAAGCTAGATGAACTACCAGATTTATCATTTCTATCTATTGACGAGGAGGCATGGAGTAATTTTGTTGAGGTTTAGTCTCTTTAATTTCGTATATTTTTCCCGAATTTTTTGTATTTTCTTTAGGAACGAAAGATCTGAAGTTAAATCAAGCTTGTTGAATCTAGTTTTGACGATATTTATTTTAGAATTTGAATTTTAGTTTAGCATTATGAGCTACCTAGATGTCTATTCTCTATTTATTATTTATGTTGGATGGATA

mRNA sequence

CTTGATGGTTGGATCCGTAACTTTCTCATTACCTTTTATGATGTTGTGTAGACAAAGAGAACCAAGAAGGCTGGCATCGTTGGCAAGTATGGCACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGTGGGAAGTACGCGGTGAAGAGGAAGGCTGTGGGAATATGGGGTTGCAAAGATTGCGGTAAAGTGAAAGCAGGAGGGGCTTACACGTTGAATACTGCAAGTGCCGTCACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAAAGCTAGATGAACTACCAGATTTATCATTTCTATCTATTGACGAGGAGGCATGGAGTAATTTTGTTGAGGTTTAGTCTCTTTAATTTCGTATATTTTTCCCGAATTTTTTGTATTTTCTTTAGGAACGAAAGATCTGAAGTTAAATCAAGCTTGTTGAATCTAGTTTTGACGATATTTATTTTAGAATTTGAATTTTAGTTTAGCATTATGAGCTACCTAGATGTCTATTCTCTATTTATTATTTATGTTGGATGGATA

Coding sequence (CDS)

ATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGTGGGAAGTACGCGGTGAAGAGGAAGGCTGTGGGAATATGGGGTTGCAAAGATTGCGGTAAAGTGAAAGCAGGAGGGGCTTACACGTTGAATACTGCAAGTGCCGTCACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAAAGCTAG

Protein sequence

MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Homology
[Close]
BLAST of Cp4.1LG17g03080 vs. Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.2e-30
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]
BLAST of Cp4.1LG17g03080 vs. Swiss-Prot
Match: RL371_ORYSJ (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTE+
Sbjct: 89 QTEA 92

[Close]
BLAST of Cp4.1LG17g03080 vs. Swiss-Prot
Match: RL372_ORYSJ (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTE+
Sbjct: 89 QTEA 92

[Close]
BLAST of Cp4.1LG17g03080 vs. Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-29
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]
BLAST of Cp4.1LG17g03080 vs. Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.9e-29
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTE 64
          Q E
Sbjct: 89 QIE 91

[Close]
BLAST of Cp4.1LG17g03080 vs. TrEMBL
Match: D7TTK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00100 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 36 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 95

Query: 61 QTES 65
          QTES
Sbjct: 96 QTES 99

[Close]
BLAST of Cp4.1LG17g03080 vs. TrEMBL
Match: A0A0D2TB63_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G167500 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]
BLAST of Cp4.1LG17g03080 vs. TrEMBL
Match: A0A0J8BIQ7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017410 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]
BLAST of Cp4.1LG17g03080 vs. TrEMBL
Match: A0A0B0N803_GOSAR (60S ribosomal L37a OS=Gossypium arboreum GN=F383_10947 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]
BLAST of Cp4.1LG17g03080 vs. TrEMBL
Match: A0A067H0Q3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045338mg PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 71  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 130

Query: 61  QTES 65
           QTES
Sbjct: 131 QTES 134

[Close]
BLAST of Cp4.1LG17g03080 vs. TAIR10
Match: AT3G10950.1 (AT3G10950.1 Zinc-binding ribosomal protein family protein)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-30
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]
BLAST of Cp4.1LG17g03080 vs. TAIR10
Match: AT3G60245.1 (AT3G60245.1 Zinc-binding ribosomal protein family protein)

HSP 1 Score: 127.1 bits (318), Expect = 3.9e-30
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTE 64
          Q E
Sbjct: 89 QIE 91

[Close]
BLAST of Cp4.1LG17g03080 vs. NCBI nr
Match: gi|976910465|gb|KVH97157.1| (Ribosomal protein L37ae, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 128 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 187

Query: 61  QTES 65
           QTES
Sbjct: 188 QTES 191

[Close]
BLAST of Cp4.1LG17g03080 vs. NCBI nr
Match: gi|641866750|gb|KDO85434.1| (hypothetical protein CISIN_1g045338mg [Citrus sinensis])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 71  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 130

Query: 61  QTES 65
           QTES
Sbjct: 131 QTES 134

[Close]
BLAST of Cp4.1LG17g03080 vs. NCBI nr
Match: gi|595849622|ref|XP_007209764.1| (hypothetical protein PRUPE_ppa013350mg [Prunus persica])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 65  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 124

Query: 61  QTES 65
           QTES
Sbjct: 125 QTES 128

[Close]
BLAST of Cp4.1LG17g03080 vs. NCBI nr
Match: gi|604343408|gb|EYU42328.1| (hypothetical protein MIMGU_mgv1a0171311mg, partial [Erythranthe guttata])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 14 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 73

Query: 61 QTES 65
          QTES
Sbjct: 74 QTES 77

[Close]
BLAST of Cp4.1LG17g03080 vs. NCBI nr
Match: gi|802540248|ref|XP_012075387.1| (PREDICTED: 60S ribosomal protein L37a isoform X1 [Jatropha curcas])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 30 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 89

Query: 61 QTES 65
          QTES
Sbjct: 90 QTES 93

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g03080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL37A_GOSHI8.2e-3098.4460S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1[more]
RL371_ORYSJ1.1e-2995.3160S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=... [more]
RL372_ORYSJ1.1e-2995.3160S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica GN=Os05g0557000 PE=... [more]
R37A1_ARATH2.4e-2993.75Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=3 SV... [more]
R37A2_ARATH6.9e-2995.2460S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=3 SV=1[more]
BLAST of Cp4.1LG17g03080 vs. TrEMBL
Match NameE-valueIdentityDescription
D7TTK2_VITVI1.1e-28100.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00100 PE=3 SV=... [more]
A0A0D2TB63_GOSRA1.1e-28100.00Uncharacterized protein OS=Gossypium raimondii GN=B456_004G167500 PE=3 SV=1[more]
A0A0J8BIQ7_BETVU1.1e-28100.00Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017410 PE=3 S... [more]
A0A0B0N803_GOSAR1.1e-28100.0060S ribosomal L37a OS=Gossypium arboreum GN=F383_10947 PE=3 SV=1[more]
A0A067H0Q3_CITSI1.1e-28100.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045338mg PE=3 SV=1[more]
BLAST of Cp4.1LG17g03080 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10950.11.3e-3093.75 Zinc-binding ribosomal protein family protein[more]
AT3G60245.13.9e-3095.24 Zinc-binding ribosomal protein family protein[more]
BLAST of Cp4.1LG17g03080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976910465|gb|KVH97157.1|1.5e-28100.00Ribosomal protein L37ae, partial [Cynara cardunculus var. scolymus][more]
gi|641866750|gb|KDO85434.1|1.5e-28100.00hypothetical protein CISIN_1g045338mg [Citrus sinensis][more]
gi|595849622|ref|XP_007209764.1|1.5e-28100.00hypothetical protein PRUPE_ppa013350mg [Prunus persica][more]
gi|604343408|gb|EYU42328.1|1.5e-28100.00hypothetical protein MIMGU_mgv1a0171311mg, partial [Erythranthe guttata][more]
gi|802540248|ref|XP_012075387.1|1.5e-28100.00PREDICTED: 60S ribosomal protein L37a isoform X1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR011332Ribosomal_zn-bd
IPR011331Ribosomal_L37ae/L37e
IPR002674Ribosomal_L37ae
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g03080.1Cp4.1LG17g03080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002674Ribosomal protein L37aePFAMPF01780Ribosomal_L37aecoord: 1..60
score: 1.1
IPR011331Ribosomal protein L37ae/L37eGENE3DG3DSA:2.20.25.30coord: 1..63
score: 1.3
IPR011332Zinc-binding ribosomal proteinunknownSSF57829Zn-binding ribosomal proteinscoord: 1..54
score: 3.97

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g03080Cucsa.266000Cucumber (Gy14) v1cgycpeB0700
Cp4.1LG17g03080CmaCh17G000740Cucurbita maxima (Rimu)cmacpeB380
Cp4.1LG17g03080CmaCh06G011910Cucurbita maxima (Rimu)cmacpeB823
Cp4.1LG17g03080CmaCh08G010080Cucurbita maxima (Rimu)cmacpeB916
Cp4.1LG17g03080CmoCh08G009800Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g03080CmoCh17G000790Cucurbita moschata (Rifu)cmocpeB342
Cp4.1LG17g03080Cla010575Watermelon (97103) v1cpewmB343
Cp4.1LG17g03080Csa2G120410Cucumber (Chinese Long) v2cpecuB304
Cp4.1LG17g03080MELO3C020369Melon (DHL92) v3.5.1cpemeB313
Cp4.1LG17g03080ClCG06G008110Watermelon (Charleston Gray)cpewcgB303
Cp4.1LG17g03080CSPI02G08710Wild cucumber (PI 183967)cpecpiB305
Cp4.1LG17g03080Lsi09G011070Bottle gourd (USVL1VR-Ls)cpelsiB252
Cp4.1LG17g03080MELO3C020369.2Melon (DHL92) v3.6.1cpemedB365
Cp4.1LG17g03080CsaV3_2G011060Cucumber (Chinese Long) v3cpecucB0374
Cp4.1LG17g03080Bhi12G001251Wax gourdcpewgoB0383
Cp4.1LG17g03080CsGy2G008970Cucumber (Gy14) v2cgybcpeB200
Cp4.1LG17g03080Carg11035Silver-seed gourdcarcpeB1503
Cp4.1LG17g03080Carg10164Silver-seed gourdcarcpeB0324
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g03080Cucumber (Chinese Long) v3cpecucB0375
Cp4.1LG17g03080Cucumber (Chinese Long) v3cpecucB0385
Cp4.1LG17g03080Cucurbita pepo (Zucchini)cpecpeB161
Cp4.1LG17g03080Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG17g03080Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG17g03080Cucumber (Gy14) v1cgycpeB0547
Cp4.1LG17g03080Cucumber (Gy14) v1cgycpeB0675
Cp4.1LG17g03080Cucurbita moschata (Rifu)cmocpeB777
Cp4.1LG17g03080Wild cucumber (PI 183967)cpecpiB304
Cp4.1LG17g03080Cucumber (Chinese Long) v2cpecuB305
Cp4.1LG17g03080Watermelon (Charleston Gray)cpewcgB293
Cp4.1LG17g03080Watermelon (Charleston Gray)cpewcgB294
Cp4.1LG17g03080Watermelon (97103) v1cpewmB331
Cp4.1LG17g03080Watermelon (97103) v1cpewmB334
Cp4.1LG17g03080Melon (DHL92) v3.5.1cpemeB310
Cp4.1LG17g03080Melon (DHL92) v3.5.1cpemeB316
Cp4.1LG17g03080Cucumber (Gy14) v2cgybcpeB201
Cp4.1LG17g03080Melon (DHL92) v3.6.1cpemedB362
Cp4.1LG17g03080Melon (DHL92) v3.6.1cpemedB371
Cp4.1LG17g03080Silver-seed gourdcarcpeB0323
Cp4.1LG17g03080Silver-seed gourdcarcpeB1330