Cp4.1LG16g08660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g08660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme E2
LocationCp4.1LG16 : 8242621 .. 8244580 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCCTCGCCCATAACGTTCACTAAATTTTTTGAATATTTATCCTTCAATTCCAATCCCTAATTCTTCATCTATTTCCTTGGTTTTAAGCTCCCTAATTTCCTCTCTCCCCTTCTGCTCCGCCTCTCTCTCTCTCTCTCTCTCTCTGCCAACGTCTCATTGATACTTCTTTGGGGGAGAATTTCCTTGGATCCTTCTTGAATTCTTCATATCATCTGTTATTCGGATCAGAGAGAATGGCGGCCATCAACCGACACACTGACAACACGACGCCGGCTAACGCTGTTGTTTCTCCAGCGAAGAAATCCTTGCCGCCGGCCAAAACCGCGGATTCTCAGTCCGTTCTCAAAAGGTATAAACATTTTTTTATCTTTTGGATTCCGTTACTATATCACTGCGGATCGACCGCTTTCCTGTGCGTCGCATCTGCTCTTTGCTTTATGTGATTTTGGGCCATTGTTAAACTTTAAGCTGGATGGGGTAGTGATAGGGTCCTGGATTATGTAATCTTCTCCCACTTGGTCTTTTTGTTCAAACGGATTTTGAGATAGATTGTTCTGTGGTCTTTCTCAACGATATTTTTAGGGTTTGCGGGGTAATATGAGAGTCTTCTCAGGTAGTCAGGTCCTCTTCCCTTAATTTAGCACCATGGTCATATGGGATCTATATTGAAAGACATGTCTCATACTTGTGTTGAAATTAGTGAAGAACCAGTCTTACTGGGAACTCCGTTTGTGTTCAACCAACTAACAATCTTCCTCTGATTTTTGGTGCTTTTACTTACACAGGTTGCAGTCTGAGTTAATGGCTTTAATGGTAAGACTTGCTACCATCTGATATTCTGGAATGTAAATTCTGAAATATTTGGAAATGTGATTCCACAGTTGCCAATAGGCTATTCTTAAAACTCATGTATCTGAAATTGCAGATGAGCGGAGACTCTGGGATCTCAGCCTTTCCTGAGGAAGATAACATATTCTGCTGGAAAGGAACAATAACTGGAAGCAAAGACACAGTGTTTGAAGGAACAGAGTACAGGCTATCCTTTTCCTTCCCTAATGATTACCCTTTTAAGCCTCCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTGGACATTTATGGCAACATTTGCTTGGACATACTTCAGGTAACTCAGTTATGATAAAATCTTCGATATTGAAATGGTAACTTCTATGGTTTATATATCAGAATGAAAAGAATCTGAAGTGAGAAATGTTTCATCTTTTGCAGGATAAATGGTCATCAGCATATGATGTGAGAACCATACTTCTATCCATCCAGAGTCTGCTTGGAGGTAACAACAACCTGAATCCTTATAATTTGGAATGGTTTTACTTGACTTGGATGGTTTTACTTCAACCTGAATCCTTTTGATTTGAATGGAATCTAGAATTTGCAATGAACCTTTTCCGTTTATTTGCAGAACCAAACATAAGTTCACCCCTGAACACCCAGGCAGCCCAATTGTGGAGCAATCAAGAAGGTGGGTTTCTATTGTTGTTGTTGTAACACAATTTTTCTCAACTCTACGAGTTGCCTTGAGATGAAAGTTTTCTCACAAATGTTTCTGTGTTCGCTGTAGAATATCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAGGAACAAAACTAGGATTTGTGTGTCTCACTCTTTTTGCGCTAGAGAGGAGGAGATTCCCAAATTATTTTTTTTTCTCTTTCCTTCAGTATGGTCTACTTTATTACTCCCAGGATGTTAGAGATATATGCTGCCTCCTGTTATATGTGGAAATTTCAAGTCATGAGCTTATATATATATATATATCTTTGTTTGTTCTCATTTCCAAGTGCGTCTACCCACACCCTTACATGCTCTTTTTAAAAAAGCTGCCTTGAAACAGAAATGATGATGTCAAACCTCTCAAAAAAGATAATAAATCC

mRNA sequence

CGCCCTCGCCCATAACGTTCACTAAATTTTTTGAATATTTATCCTTCAATTCCAATCCCTAATTCTTCATCTATTTCCTTGGTTTTAAGCTCCCTAATTTCCTCTCTCCCCTTCTGCTCCGCCTCTCTCTCTCTCTCTCTCTCTCTGCCAACGTCTCATTGATACTTCTTTGGGGGAGAATTTCCTTGGATCCTTCTTGAATTCTTCATATCATCTGTTATTCGGATCAGAGAGAATGGCGGCCATCAACCGACACACTGACAACACGACGCCGGCTAACGCTGTTGTTTCTCCAGCGAAGAAATCCTTGCCGCCGGCCAAAACCGCGGATTCTCAGTCCGTTCTCAAAAGGTTGCAGTCTGAGTTAATGGCTTTAATGATGAGCGGAGACTCTGGGATCTCAGCCTTTCCTGAGGAAGATAACATATTCTGCTGGAAAGGAACAATAACTGGAAGCAAAGACACAGTGTTTGAAGGAACAGAGTACAGGCTATCCTTTTCCTTCCCTAATGATTACCCTTTTAAGCCTCCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTGGACATTTATGGCAACATTTGCTTGGACATACTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACCATACTTCTATCCATCCAGAGTCTGCTTGGAGAACCAAACATAAGTTCACCCCTGAACACCCAGGCAGCCCAATTGTGGAGCAATCAAGAAGAATATCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAGGAACAAAACTAGGATTTGTGTGTCTCACTCTTTTTGCGCTAGAGAGGAGGAGATTCCCAAATTATTTTTTTTTCTCTTTCCTTCAGTATGGTCTACTTTATTACTCCCAGGATGTTAGAGATATATGCTGCCTCCTGTTATATGTGGAAATTTCAAGTCATGAGCTTATATATATATATATATCTTTGTTTGTTCTCATTTCCAAGTGCGTCTACCCACACCCTTACATGCTCTTTTTAAAAAAGCTGCCTTGAAACAGAAATGATGATGTCAAACCTCTCAAAAAAGATAATAAATCC

Coding sequence (CDS)

ATGGCGGCCATCAACCGACACACTGACAACACGACGCCGGCTAACGCTGTTGTTTCTCCAGCGAAGAAATCCTTGCCGCCGGCCAAAACCGCGGATTCTCAGTCCGTTCTCAAAAGGTTGCAGTCTGAGTTAATGGCTTTAATGATGAGCGGAGACTCTGGGATCTCAGCCTTTCCTGAGGAAGATAACATATTCTGCTGGAAAGGAACAATAACTGGAAGCAAAGACACAGTGTTTGAAGGAACAGAGTACAGGCTATCCTTTTCCTTCCCTAATGATTACCCTTTTAAGCCTCCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTGGACATTTATGGCAACATTTGCTTGGACATACTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACCATACTTCTATCCATCCAGAGTCTGCTTGGAGAACCAAACATAAGTTCACCCCTGAACACCCAGGCAGCCCAATTGTGGAGCAATCAAGAAGAATATCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAG

Protein sequence

MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTAA
Homology
[Close]
BLAST of Cp4.1LG16g08660 vs. Swiss-Prot
Match: UBC20_ARATH (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 6.8e-82
Identity = 150/180 (83.33%), Postives = 157/180 (87.22%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N +  NT       + +K+   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]
BLAST of Cp4.1LG16g08660 vs. Swiss-Prot
Match: UBC19_ARATH (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 8.4e-80
Identity = 148/181 (81.77%), Postives = 155/181 (85.64%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANA-VVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N +T NT  A     + +K+S PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]
BLAST of Cp4.1LG16g08660 vs. Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-53
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 1 

Query: 31  ADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSF 90
           +   SV KRLQSELM LMM    GISAFP+ DNIF W GTI G+KDTV+E  E+++S  F
Sbjct: 2   SQDHSVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKF 61

Query: 91  PNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 150
           P DYP+KPP VKFET CFHPNVD  GNICLDIL+DKWS  Y+VR++L+SIQSLLGEPN  
Sbjct: 62  PTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNE 121

Query: 151 SPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 181
           SPLN+ AA LWSNQ+EY+K+++K Y+  T+
Sbjct: 122 SPLNSYAASLWSNQDEYKKVLDKRYQEATS 151

[Close]
BLAST of Cp4.1LG16g08660 vs. Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-52
Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 1 

Query: 8   TDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  PA   V+ A+K   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPAATSVTAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]
BLAST of Cp4.1LG16g08660 vs. Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-52
Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 1 

Query: 8   TDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  P  A V+ A+K   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPVAASVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]
BLAST of Cp4.1LG16g08660 vs. TrEMBL
Match: A0A0A0KF07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434330 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.0e-96
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINR+TDNT PAN VVSPAK+SLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG16g08660 vs. TrEMBL
Match: A9PAG1_POPTR (Ubiquitin-conjugating enzyme 19 family protein OS=Populus trichocarpa GN=POPTR_0009s05420g PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.0e-84
Identity = 157/181 (86.74%), Postives = 167/181 (92.27%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAIN HT    PA    +P+K+++P AKT D+QSVLKRLQSELMALMMSG+SGISAFPE
Sbjct: 1   MAAINGHTPVAAPAGT--TPSKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
            DNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  GDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 179

Query: 181 A 182
           A
Sbjct: 181 A 179

[Close]
BLAST of Cp4.1LG16g08660 vs. TrEMBL
Match: B9RIG7_RICCO (Ubiquitin-conjugating enzyme E2 C, putative OS=Ricinus communis GN=RCOM_1578930 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 4.3e-83
Identity = 153/180 (85.00%), Postives = 167/180 (92.78%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MA +N +  NT  A+A  +P+K+++P  KT D+QSVLKRLQSELMALMMSG+SGISAFPE
Sbjct: 1   MATVNGYQGNTPVASAG-APSKQTVPTVKTVDTQSVLKRLQSELMALMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTIL+SIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILISIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 179

[Close]
BLAST of Cp4.1LG16g08660 vs. TrEMBL
Match: A0A061GTP8_THECC (Ubiquitin-conjugating enzyme19 isoform 1 OS=Theobroma cacao GN=TCM_040797 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.1e-82
Identity = 155/180 (86.11%), Postives = 162/180 (90.00%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MA +N +  NT  A +  +  K+  P AKT DSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MATVNGYQGNTPVATS--TGTKQPAPTAKTVDSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS +FPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLAFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYK P A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKAPNA 178

[Close]
BLAST of Cp4.1LG16g08660 vs. TrEMBL
Match: A0A067JQ62_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25961 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.8e-82
Identity = 151/180 (83.89%), Postives = 162/180 (90.00%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MA IN +  NT  A    + +K++LP   T D+QSVLKRLQSELM+LMMSG+SGISAFPE
Sbjct: 1   MATINGYQGNTPVATPAATQSKQTLPTVNTVDTQSVLKRLQSELMSLMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFK PKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKSPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]
BLAST of Cp4.1LG16g08660 vs. TAIR10
Match: AT1G50490.1 (AT1G50490.1 ubiquitin-conjugating enzyme 20)

HSP 1 Score: 304.7 bits (779), Expect = 3.9e-83
Identity = 150/180 (83.33%), Postives = 157/180 (87.22%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N +  NT       + +K+   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]
BLAST of Cp4.1LG16g08660 vs. TAIR10
Match: AT3G20060.1 (AT3G20060.1 ubiquitin-conjugating enzyme19)

HSP 1 Score: 297.7 bits (761), Expect = 4.7e-81
Identity = 148/181 (81.77%), Postives = 155/181 (85.64%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANA-VVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N +T NT  A     + +K+S PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]
BLAST of Cp4.1LG16g08660 vs. TAIR10
Match: AT1G14400.1 (AT1G14400.1 ubiquitin carrier protein 1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 1 

Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L     +GIS  P+++NI  W   I G  DT ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 158 AQLWS-NQEEYRKMV 172
           A+++S ++ EY + V
Sbjct: 127 ARMYSESKREYNRRV 141

[Close]
BLAST of Cp4.1LG16g08660 vs. TAIR10
Match: AT2G02760.1 (AT2G02760.1 ubiquiting-conjugating enzyme 2)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L     +GIS  P+++NI  W   I G  DT ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 158 AQLWS-NQEEYRKMVEKL 175
           A+++S ++ EY + V ++
Sbjct: 127 ARMFSESKREYNRRVREV 144

[Close]
BLAST of Cp4.1LG16g08660 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29
Identity = 65/137 (47.45%), Postives = 89/137 (64.96%), Query Frame = 1 

Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L      GIS  P+++NI  W   I G +DT ++G  ++L+  F  DYP K
Sbjct: 7   KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  +L SIQSLL +PN  SP N +A
Sbjct: 67  PPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEA 126

Query: 158 AQLWS-NQEEY-RKMVE 173
           A+L+S N+ EY RK++E
Sbjct: 127 ARLFSENKREYNRKVIE 143

[Close]
BLAST of Cp4.1LG16g08660 vs. NCBI nr
Match: gi|449444891|ref|XP_004140207.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 2.9e-96
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINR+TDNT PAN VVSPAK+SLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG16g08660 vs. NCBI nr
Match: gi|224106219|ref|XP_002314089.1| (ubiquitin-conjugating enzyme 19 family protein [Populus trichocarpa])

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84
Identity = 157/181 (86.74%), Postives = 167/181 (92.27%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAIN HT    PA    +P+K+++P AKT D+QSVLKRLQSELMALMMSG+SGISAFPE
Sbjct: 1   MAAINGHTPVAAPAGT--TPSKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
            DNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  GDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 179

Query: 181 A 182
           A
Sbjct: 181 A 179

[Close]
BLAST of Cp4.1LG16g08660 vs. NCBI nr
Match: gi|1009114721|ref|XP_015873839.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba])

HSP 1 Score: 319.3 bits (817), Expect = 4.3e-84
Identity = 158/186 (84.95%), Postives = 167/186 (89.78%), Query Frame = 1 

Query: 1   MAAINRHTDN------TTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSG 60
           MAA+N  ++        TP  A  +P K+SLPPAKT DSQSVLKRLQSELMALMMSGDSG
Sbjct: 1   MAAVNGFSETGHGYQTNTPVTAA-APTKQSLPPAKTVDSQSVLKRLQSELMALMMSGDSG 60

Query: 61  ISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDI 120
           ISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLS SFPNDYPFKPPKVKFETGCFHPNVD+
Sbjct: 61  ISAFPEEDNIFCWKGTIIGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDV 120

Query: 121 YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKL 180
           YGNICLDILQDKWSSAYDVRT+L+SIQSLLGEPNISSPLNTQAAQLW+NQEEYRKMVEKL
Sbjct: 121 YGNICLDILQDKWSSAYDVRTVLISIQSLLGEPNISSPLNTQAAQLWNNQEEYRKMVEKL 180

[Close]
BLAST of Cp4.1LG16g08660 vs. NCBI nr
Match: gi|923718622|ref|XP_013664335.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Brassica napus])

HSP 1 Score: 315.5 bits (807), Expect = 6.2e-83
Identity = 154/180 (85.56%), Postives = 161/180 (89.44%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N +  NT PA+      K+S PP KT DSQSVLKRLQSELM LMM GD GISAFPE
Sbjct: 1   MAAVNGYQGNTPPAS------KQSAPPTKTVDSQSVLKRLQSELMGLMMGGDPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPK+KF TGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKIKFHTGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 174

[Close]
BLAST of Cp4.1LG16g08660 vs. NCBI nr
Match: gi|255544950|ref|XP_002513536.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20 [Ricinus communis])

HSP 1 Score: 315.5 bits (807), Expect = 6.2e-83
Identity = 153/180 (85.00%), Postives = 167/180 (92.78%), Query Frame = 1 

Query: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MA +N +  NT  A+A  +P+K+++P  KT D+QSVLKRLQSELMALMMSG+SGISAFPE
Sbjct: 1   MATVNGYQGNTPVASAG-APSKQTVPTVKTVDTQSVLKRLQSELMALMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTIL+SIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILISIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 179

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g08660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC20_ARATH6.8e-8283.33Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1[more]
UBC19_ARATH8.4e-8081.77Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1[more]
UBE2C_DICDI2.3e-5365.33Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c ... [more]
UBE2C_MACFA4.3e-5260.12Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1[more]
UBE2C_BOVIN4.3e-5260.12Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1[more]
BLAST of Cp4.1LG16g08660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF07_CUCSA2.0e-9696.69Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434330 PE=3 SV=1[more]
A9PAG1_POPTR1.0e-8486.74Ubiquitin-conjugating enzyme 19 family protein OS=Populus trichocarpa GN=POPTR_0... [more]
B9RIG7_RICCO4.3e-8385.00Ubiquitin-conjugating enzyme E2 C, putative OS=Ricinus communis GN=RCOM_1578930 ... [more]
A0A061GTP8_THECC2.1e-8286.11Ubiquitin-conjugating enzyme19 isoform 1 OS=Theobroma cacao GN=TCM_040797 PE=3 S... [more]
A0A067JQ62_JATCU4.8e-8283.89Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25961 PE=3 SV=1[more]
BLAST of Cp4.1LG16g08660 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G50490.13.9e-8383.33 ubiquitin-conjugating enzyme 20[more]
AT3G20060.14.7e-8181.77 ubiquitin-conjugating enzyme19[more]
AT1G14400.11.0e-3046.67 ubiquitin carrier protein 1[more]
AT2G02760.11.0e-3045.65 ubiquiting-conjugating enzyme 2[more]
AT5G62540.11.1e-2947.45 ubiquitin-conjugating enzyme 3[more]
BLAST of Cp4.1LG16g08660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444891|ref|XP_004140207.1|2.9e-9696.69PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cucumis sativus][more]
gi|224106219|ref|XP_002314089.1|1.5e-8486.74ubiquitin-conjugating enzyme 19 family protein [Populus trichocarpa][more]
gi|1009114721|ref|XP_015873839.1|4.3e-8484.95PREDICTED: ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba][more]
gi|923718622|ref|XP_013664335.1|6.2e-8385.56PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Brassica napus][more]
gi|255544950|ref|XP_002513536.1|6.2e-8385.00PREDICTED: ubiquitin-conjugating enzyme E2 20 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0031145 anaphase-promoting complex-dependent catabolic process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0030071 regulation of mitotic metaphase/anaphase transition
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g08660.1Cp4.1LG16g08660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 39..173
score: 3.1
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 38..170
score: 3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 24..174
score: 5.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 29..174
score: 1.57
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 108..123
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 15..173
score: 4.4
NoneNo IPR availablePANTHERPTHR24067:SF121SUBFAMILY NOT NAMEDcoord: 15..173
score: 4.4
NoneNo IPR availableSMARTSM00212ubc_7coord: 38..180
score: 8.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g08660Cucsa.124010Cucumber (Gy14) v1cgycpeB0315
Cp4.1LG16g08660CmaCh02G012670Cucurbita maxima (Rimu)cmacpeB627
Cp4.1LG16g08660CmoCh02G013070Cucurbita moschata (Rifu)cmocpeB576
Cp4.1LG16g08660CmoCh20G001030Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g08660Cla008564Watermelon (97103) v1cpewmB287
Cp4.1LG16g08660Csa6G434330Cucumber (Chinese Long) v2cpecuB281
Cp4.1LG16g08660MELO3C014573Melon (DHL92) v3.5.1cpemeB278
Cp4.1LG16g08660ClCG02G023030Watermelon (Charleston Gray)cpewcgB255
Cp4.1LG16g08660CSPI06G23980Wild cucumber (PI 183967)cpecpiB283
Cp4.1LG16g08660MELO3C014573.2Melon (DHL92) v3.6.1cpemedB324
Cp4.1LG16g08660CsaV3_6G039130Cucumber (Chinese Long) v3cpecucB0348
Cp4.1LG16g08660CsGy6G023340Cucumber (Gy14) v2cgybcpeB755
Cp4.1LG16g08660Carg06891Silver-seed gourdcarcpeB0733
Cp4.1LG16g08660Carg02694Silver-seed gourdcarcpeB1273
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG16g08660Cp4.1LG05g04820Cucurbita pepo (Zucchini)cpecpeB310
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g08660Silver-seed gourdcarcpeB0654
Cp4.1LG16g08660Cucumber (Chinese Long) v3cpecucB0333
Cp4.1LG16g08660Wax gourdcpewgoB0354
Cp4.1LG16g08660Wax gourdcpewgoB0375
Cp4.1LG16g08660Cucurbita pepo (Zucchini)cpecpeB287
Cp4.1LG16g08660Cucurbita pepo (Zucchini)cpecpeB305
Cp4.1LG16g08660Cucurbita maxima (Rimu)cmacpeB125
Cp4.1LG16g08660Cucurbita maxima (Rimu)cmacpeB564
Cp4.1LG16g08660Cucurbita moschata (Rifu)cmocpeB053
Cp4.1LG16g08660Cucurbita moschata (Rifu)cmocpeB102
Cp4.1LG16g08660Wild cucumber (PI 183967)cpecpiB268
Cp4.1LG16g08660Bottle gourd (USVL1VR-Ls)cpelsiB227
Cp4.1LG16g08660Bottle gourd (USVL1VR-Ls)cpelsiB246
Cp4.1LG16g08660Watermelon (Charleston Gray)cpewcgB276
Cp4.1LG16g08660Cucumber (Gy14) v2cgybcpeB037