Cp4.1LG05g04820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g04820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme E2
LocationCp4.1LG05 : 2847722 .. 2853319 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTCACTAAATTTTTTGAATATTTACCCTTAAAATCAGAGCCCTAATTCTTCGTCTCTCTCCTTCGATTTAAGCCCTACAGTCTCCCTTCTCTCCCTTCCAACGTCTAATCGATACTTCGTTGGTGGAGAAATTCCTTGGATTATTCGCGAATTACTCGTGTCTTCTGTAATTTGGATCAGAGAGAATGGCGGCCATTAACCGATACACTGATAACACGACGCCGGCTAACCCTGTTGTTTCTCCAGCCAAGCAATCCTTACCGCCGGCCAAAACCGCGGACTCTCAGTCCGTTCTCAAAAGGTATATATATTTCCGATCTGTCGTATTTGATTTGATACGTACGAGACTACGGATCGATCGCGGTTCTGTGCGTGTGCAATCGCCTCCGCTGTTTTGTGATATTCGGCCATTATTGAACTTTACGCTGGATGAGAGTGTTCTAGGGTTCCGGATTTAGTTTGAACTGATTTTGAGGACTGTTCTGTGGTCTTTCGCAATGATCTTTTTAGGGATTTAAGGGTAATTTGAGTGTCCTCTAAGGTTCTCTCCCTAACTTTTGCACCATAGCCACATGGATCTATGTTGAACGATATACCTCGTTCTTGCGTGTTTTATATCAAGAAATTAGTGAAGAACATATATAACTAACGATCTTCCTTCAATTTTTGTTGTGTTTTCTCTGACAACAGGTTGCAGTCTGAGTTAATGGCTCTAATGGTAAGACTTGAATTGAAGGATTGTTCTGTGTCATGTGTTATCTTCCGACTGTTAAGTTGAAGTATTTGCTGATAGATGAATAAACTCATGGTTTTGAAATTGCAGATGAGCGGAGACTCTGGGATTTCAGCCTTTCCGGAGGAGGACAACATATTCTGCTGGAAAGGGACAATAACCGGAAGCAAAGACACAGTGTTTGAGGGAACAGAGTATAGACTATCCTTTTCGTTCCCTAACGATTACCCTTTTAAGCCACCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTCGACATTTATGGCAATATTTGCTTGGACATACTTCAGGTAATTGAGCTATAGCCAAGTCTTCGACATTGAAACCGTAACTTCTATCCAGAAGTGAGTAATGTTTAATTTTCTGCAGGATAAATGGTCATCAGCCTATGATGTGAGAACAATACTTCTATCCATCCAGAGTCTGCTTGGAGGTATACTTCCTGACTTGATGGTTTTATTTCAATCTGAATGCTTCTAATTTTGGGAATGGAAAATGGATTTTGCGAATGACCCTTTGCCGCCATTTACTTGCAGAACCAAACACAAGCTCACCTTTAAACACCCAAGCAGCCCAATTGTGGAGCAATCAAGAAGGTGGGTTTCCATTGTAACACTAGTTTTTTTTCCTTCTCTCTCTGAGTTCATGTGAAAGTTGGCTCACTCATGTTTTCTGTGTTTTCTGTAGATTATAGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCAGCTTAGATTGTTTTAGTTTCCCAAATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGTAATAGATGTTATATGGTGTCTCTCCTGTTATAAGTGGAAATTTCAAGTCATGAGCCTATTAGTGTTCTCATTTCAGTGTTCTATCAGCCTACAATTCAAATTCTTGTTGATTAGTTTCTGTCCAAATGCTTGATTAATGCAGAAGATTGTTGAAATTTTTTTACATATCAAGAAGTATTTAAATTGACTAATCCTATCGTGTTAATACTAATTAATTCATAGCTACGATTTAATATTTTATTTAGGATTGTAGGCACTCTTTTGAACCAGGTCAATGCTCAAAGTGAGAAGATGGTTCTTCTGTATTGGACCCAGTGTGTTTGTCGTCCTTCTCTTGCCTTGTTCATGAGTTCTTCAGGAGAGCTTAGGTTGCGTGGTTGAAGGTTTGCTTGCCTTGAGATGGGGGGAGGTTCGGGAATTTAGGGGCCTGTCTCCACTTGGAGTGTTGCGGTTGTAATGAAGCTTCTATTGCTTATTCTTATTGGTTTGGTTCTCTATGTGTAGCTCGTGGTGTGGTGAGACGGTATATCTTGTGTGGGTGTAGGAGGCATGTGTACGACTTATAAATTTTCCTCCTAGTGCTCAAGAGCCAGGGCACTCCTTTATAGCTTCGTTTGTTGTTTGGGATAGATTCCTAGTGGGAAATCATCTTCATAACTCGAATCATTCTATCCCAACAAATTATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCCCTTTTCCCGAGTCTATTTAGGGTGAGGTATTGCAAGGACTAGAGAGATAACTTGGATCTTCCAGTTTAGTACATGTAAGTGTTTTTGCATAATTCTTGAGTGTACGGCAAGATCCACCTGTTGACCGGGGACAAAAGTCGGCCTCAGTGATTCAACAATGCCAAGTGGAAGGGCTGTCGCTCAATGGCTTCTTAGTGCTTCAGAAAATGAGATTCCGACCAAGAACAAAAGCACGACCCACCTCAACAAACAATCGATTCACCTCAACAAACAATCGATTGAGAAAGAAGAGACCTGTTAGAACATCCTATTGCTTTTAGTCATTCTACCAACCTCTTGCGAAAAGTTGAACAAACACCAAACCTTGGTTAAGGAGTATCTGGCGAATGCCCGCGATGTGCCATAACTATCACTTATTGCGGGAAGAGTTCATGGTTCTTGCTAGCAGCCTCCTCAAGTTTAAAAGAATGAGCAATGAAAAAGGAACATGCCATGGAACATTTGACAAGGTCCAAATATTAGGACAATGGCCAGACCCACGTCTTTGACAACCATGAAAAAACATTCCCATCTCACCCAACGTAGGGCTCTGCTGATGCAACAAATAGTAGAAAGAACCAAAAAAAAAAAAAAAATGGTCAAAGCCCAGCATCATAAATGGTGAAATCCAGTATACCAACGCATTCAATTACAAAAGCCAGCCTTGGGAGTTGACAATTAGCTTACAAATAAATGCAAAGAACAAGATATTGACAATTCCAGTATCAAATAATACAAAGCCATTTCTTTTCCTCTTTTTTTTTTTTTTTAATACAGAGAGACATCACATTCTGAAGAAATGAATTTCTCTAACTTTACAGGATCTCTATATGTATATATAATATATATATATCAGCTATATATATTCATATATATGGCAAATCAATTGGATGAATGTGATGCAGCAAGAAGAGCTGCTCCAATGCCGGATCCATCTTCAGTTACCCTGAGAATTACATGTTTGGCATTATCTTCTCCCAGAATCTCAGTCAAAGCTTCAAGCAAGTACTCTCTGAACATCGTGTAATTAGTATATAATCCCCCATCGACTGCCACCACCGTTCTTTTCATATTCACAGCACTTCTACTTCTTACTCCTGCAATTCCTCCTGTTCCATCCCGCCCCATCTTCTTTAGGATACCCAGAATGCCAGCAGCTACCAACCGGGCAGCTCGGCGCGTCACTGTGTTGCATATTCTTACTACAAGTTTTCGAGCTTTTAAAGGGACTTCAAGAATCTGGAAAAGCGGATACACAGAGAGAGGAAGTGTTACTTGTCTGAATTTTGGGTCAAATTGAAGGGGGGGGNGGGAAAGGAATGATAACGGATAGTAATAGCATAATTTTAAAGATCCTCTATACCCCCAAGGTGTCCCTCAAGATCCTTGCTACTTCTCTCAAGTCAGGAGACTCGTCTTCGTGCATCTCAGCCATTAGAGGTGTTCTGAACACATAAAAGCAATCACTTACTAGTTCCAAATTAAATCAGAAACAAAAGTTCAGAACACTGTCAAATTCATAGTTGTTGTAGGTAAATGAGATACGATTCACATGCAACCCTAGTTGTTCAGAACAGTGCTTGCAACCATAATTGTGCATTACATGATATGATTCACATGCAATTTAAAATTACCTATCTATTATTTTCCACAAAGAATGTCCAAAGTCAAATTCATTTTCAATAGGCACGAGAGAAAGGAACATACGTCAACACAAATGCCATGGATAACCTGGATGAACCTGACCCAAAAATATCGGATTCTCTCGACATTTGAAGAATCACTCTTCTCACAATGTCACCCAGGTACATTCCCGATATCATCTTTTCAAAACCCTGCTCAAGACTCACGCAAAAGTACAAATTAGTTTCCATATGACAAATTAGTGCTAGAAAAAGGGAAAACTAAGTAGTACCTGATCATTTGGATTGGGGCTGTCAAAATCCAAATCAATATCATAGGAAGTTCTAGGTAAATGAGAGGACCAAAAATTTCCCCACTCCATGTTAATAACCTGACCAAGAAAATAAGAACTTCAGACAATCACATTTACTTTGAAATAGTATCCACATAAAATTTAAAAGAAGATTTAAAGACAGGCTGGCTCCTACCATGAACCCAGAGGTTGTATGAAGTCCTTGACACTTGATAATAGCATCTGTACGCTCCAAATAACAGGCATTGGTGCCAGTTCCAATTATCACTGCAGCAACAGTGTCAGCATCCTGATAATGTCCAAGAGCTAATGTCCCCACAGTGTCATTTATCTGCTTCAAAGATATATATGGACTCATGACCTCCGAGTAATGCAACATTTAGCACCAACTTCCAATCCAAGTATGAAAAGTAGTCACATAAATTACAAGTCTATGGCTTACCAAGCCTTTATGTTTGGCATGCATGTCTTTAAGAAAAGAGATCATCTATTGACTCCGGAATATAAACTATTATAACAATTCCCAGTCTCCTACCAACAAATTTGTAAAGCTCCTCTTACTTTTTGAAATTAATTGCATATTGTATTCTCTGTGTTCCTATTAGATATGGTGCATGGGATGGAGAGAAAAAGATAGTACAGGCTTTGGTATAAATTTTTTTTGATAAGAGGCTTTGGTATAAATGAAAAACTAGAAACTTAAGCCATGAGGACCAAGCTATAAATATCTCAGGAACTAAAAGCTGAAAACAATTCTAGTTCCATAAATCACCTTTCCAACTACAATTTCTTTGATCACAATGAGAGGAAATGAAAACTTACAAGTGCTGTGACTCTTATGTTGAGACCCTTTCTGTTCAATGCTTGTTGCAAGCACTCCGTAACATCTCTCCCAACCTGACCAATAAAGAAGTTTAGCACCTTGCAGAATTAAACTTGTTTTCAAGGAACGTATAATTTGATTGATAATTTAATATAAAGTCAATACTCAAAACAAGCACCAGATTCCGTGGATTGATGTAAGAATCCTAAGAGAAAATGCAAAGCATGCTTAGTCATGAATGGCACAAACAATAGAACTAATACCCCACCCTGCCTACACTATGGCAACAGCACAGGAGAATTTATACAAGAATGAATTTTCACTCTCTCACTCTTTCCAAAGCCTAAATCTACAGAGACACCATCCAACTAACCATGTCTTCAATGGAAAATCCTTTCGTCCACTTAATTAACACGCCAGATGAAATGGAAGTTTGTTTTGTGGGAAAAGAGAACGTAAAACCAAGGTCCCTTCTCCCACCTAGAA

mRNA sequence

CGTTCACTAAATTTTTTGAATATTTACCCTTAAAATCAGAGCCCTAATTCTTCGTCTCTCTCCTTCGATTTAAGCCCTACAGTCTCCCTTCTCTCCCTTCCAACGTCTAATCGATACTTCGTTGGTGGAGAAATTCCTTGGATTATTCGCGAATTACTCGTGTCTTCTGTAATTTGGATCAGAGAGAATGGCGGCCATTAACCGATACACTGATAACACGACGCCGGCTAACCCTGTTGTTTCTCCAGCCAAGCAATCCTTACCGCCGGCCAAAACCGCGGACTCTCAGTCCGTTCTCAAAAGGTTGCAGTCTGAGTTAATGGCTCTAATGATGAGCGGAGACTCTGGGATTTCAGCCTTTCCGGAGGAGGACAACATATTCTGCTGGAAAGGGACAATAACCGGAAGCAAAGACACAGTGTTTGAGGGAACAGAGTATAGACTATCCTTTTCGTTCCCTAACGATTACCCTTTTAAGCCACCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTCGACATTTATGGCAATATTTGCTTGGACATACTTCAGGATAAATGGTCATCAGCCTATGATGTGAGAACAATACTTCTATCCATCCAGAGTCTGCTTGGAGAACCAAACACAAGCTCACCTTTAAACACCCAAGCAGCCCAATTGTGGAGCAATCAAGAAGATTATAGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCAGCTTAGATTGTTTTAGTTTCCCAAATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGTAATAGATGTTATATGGTGTCTCTCCTGTTATAAGTGGAAATTTCAAGTCATGAGCCTATTAGTGTTCTCATTTCAGTGTTCTATCAGCCTACAATTCAAATTCTTGTTGATTAGTTTCTGTCCAAATGCTTGATTAATGCAGAAGATTGTTGAAATTTTTTTACATATCAAGAAGTATTTAAATTGACTAATCCTATCGTGTTAATACTAATTAATTCATAGCTACGATTTAATATTTTATTTAGGATTGTAGGCACTCTTTTGAACCAGGTCAATGCTCAAAGTGAGAAGATGGTTCTTCTGTATTGGACCCAGTGTGTTTGTCGTCCTTCTCTTGCCTTGTTCATGAGTTCTTCAGGAGAGCTTAGGTTGCGTGGTTGAAGGTTTGCTTGCCTTGAGATGGGGGGAGGTTCGGGAATTTAGGGGCCTGTCTCCACTTGGAGTGTTGCGGTTGTAATGAAGCTTCTATTGCTTATTCTTATTGGTTTGGTTCTCTATGTGTAGCTCGTGGTGTGGTGAGACGGTATATCTTGTGTGGGTGTAGGAGGCATGTGTACGACTTATAAATTTTCCTCCTAGTGCTCAAGAGCCAGGGCACTCCTTTATAGCTTCGTTTGTTGTTTGGGATAGATTCCTAGTGGGAAATCATCTTCATAACTCGAATCATTCTATCCCAACAAATTATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCCCTTTTCCCGAGTCTATTTAGGGTGAGGTATTGCAAGGACTAGAGAGATAACTTGGATCTTCCAGTTTAGTACATGTAAGTGTTTTTGCATAATTCTTGAGTGTACGGCAAGATCCACCTGTTGACCGGGGACAAAAGTCGGCCTCAGTGATTCAACAATGCCAAGTGGAAGGGCTGTCGCTCAATGGCTTCTTAGTGCTTCAGAAAATGAGATTCCGACCAAGAACAAAAGCACGACCCACCTCAACAAACAATCGATTCACCTCAACAAACAATCGATTGAGAAAGAAGAGACCTGTTAGAACATCCTATTGCTTTTAGTCATTCTACCAACCTCTTGCGAAAAGTTGAACAAACACCAAACCTTGGTTAAGGAGTATCTGGCGAATGCCCGCGATGTGCCATAACTATCACTTATTGCGGGAAGAGTTCATGGTTCTTGCTAGCAGCCTCCTCAAGTTTAAAAGAATGAGCAATGAAAAAGGAACATGCCATGGAACATTTGACAAGGTCCAAATATTAGGACAATGGCCAGACCCACGTCTTTGACAACCATGAAAAAACATTCCCATCTCACCCAACGTAGGGCTCTGCTGATGCAACAAATAGTAGAAAGAACCAAAAAAAAAAAAAAAATGGTCAAAGCCCAGCATCATAAATGGTGAAATCCAGTATACCAACGCATTCAATTACAAAAGCCAGCCTTGGGAGTTGACAATTAGCTTACAAATAAATGCAAAGAACAAGATATTGACAATTCCAGTATCAAATAATACAAAGCCATTTCTTTTCCTCTTTTTTTTTTTTTTTAATACAGAGAGACATCACATTCTGAAGAAATGAATTTCTCTAACTTTACAGGATCTCTATATGTATATATAATATATATATATCAGCTATATATATTCATATATATGGCAAATCAATTGGATGAATGTGATGCAGCAAGAAGAGCTGCTCCAATGCCGGATCCATCTTCAGTTACCCTGAGAATTACATGTTTGGCATTATCTTCTCCCAGAATCTCAGTCAAAGCTTCAAGCAAGTACTCTCTGAACATCGTGTAATTAGTATATAATCCCCCATCGACTGCCACCACCGTTCTTTTCATATTCACAGCACTTCTACTTCTTACTCCTGCAATTCCTCCTGTTCCATCCCGCCCCATCTTCTTTAGGATACCCAGAATGCCAGCAGCTACCAACCGGGCAGCTCGGCGCGTCACTGTGTTGCATATTCTTACTACAAGTTTTCGAGCTTTTAAAGGGACTTCAAGAATCTGGAAAAGCGGATACACAGAGAGAGGAAGTGTTACTTGTCTGAATTTTGGGTCAAATTGAAGGGGGGGGNGGGAAAGGAATGATAACGGATAGTAATAGCATAATTTTAAAGATCCTCTATACCCCCAAGGTGTCCCTCAAGATCCTTGCTACTTCTCTCAAGTCAGGAGACTCGTCTTCGTGCATCTCAGCCATTAGAGGTGTTCTGAACACATAAAAGCAATCACTTACTAGTTCCAAATTAAATCAGAAACAAAAGTTCAGAACACTGTCAAATTCATAGTTGTTGTAGGTAAATGAGATACGATTCACATGCAACCCTAGTTGTTCAGAACAGTGCTTGCAACCATAATTGTGCATTACATGATATGATTCACATGCAATTTAAAATTACCTATCTATTATTTTCCACAAAGAATGTCCAAAGTCAAATTCATTTTCAATAGGCACGAGAGAAAGGAACATACGTCAACACAAATGCCATGGATAACCTGGATGAACCTGACCCAAAAATATCGGATTCTCTCGACATTTGAAGAATCACTCTTCTCACAATGTCACCCAGGTACATTCCCGATATCATCTTTTCAAAACCCTGCTCAAGACTCACGCAAAAGTACAAATTAGTTTCCATATGACAAATTAGTGCTAGAAAAAGGGAAAACTAAGTAGTACCTGATCATTTGGATTGGGGCTGTCAAAATCCAAATCAATATCATAGGAAGTTCTAGGTAAATGAGAGGACCAAAAATTTCCCCACTCCATGTTAATAACCTGACCAAGAAAATAAGAACTTCAGACAATCACATTTACTTTGAAATAGTATCCACATAAAATTTAAAAGAAGATTTAAAGACAGGCTGGCTCCTACCATGAACCCAGAGGTTGTATGAAGTCCTTGACACTTGATAATAGCATCTGTACGCTCCAAATAACAGGCATTGGTGCCAGTTCCAATTATCACTGCAGCAACAGTGTCAGCATCCTGATAATGTCCAAGAGCTAATGTCCCCACAGTGTCATTTATCTGCTTCAAAGATATATATGGACTCATGACCTCCGAGTAATGCAACATTTAGCACCAACTTCCAATCCAAGTATGAAAAGTAGTCACATAAATTACAAGTCTATGGCTTACCAAGCCTTTATGTTTGGCATGCATGTCTTTAAGAAAAGAGATCATCTATTGACTCCGGAATATAAACTATTATAACAATTCCCAGTCTCCTACCAACAAATTTGTAAAGCTCCTCTTACTTTTTGAAATTAATTGCATATTGTATTCTCTGTGTTCCTATTAGATATGGTGCATGGGATGGAGAGAAAAAGATAGTACAGGCTTTGGTATAAATTTTTTTTGATAAGAGGCTTTGGTATAAATGAAAAACTAGAAACTTAAGCCATGAGGACCAAGCTATAAATATCTCAGGAACTAAAAGCTGAAAACAATTCTAGTTCCATAAATCACCTTTCCAACTACAATTTCTTTGATCACAATGAGAGGAAATGAAAACTTACAAGTGCTGTGACTCTTATGTTGAGACCCTTTCTGTTCAATGCTTGTTGCAAGCACTCCGTAACATCTCTCCCAACCTGACCAATAAAGAAGTTTAGCACCTTGCAGAATTAAACTTGTTTTCAAGGAACGTATAATTTGATTGATAATTTAATATAAAGTCAATACTCAAAACAAGCACCAGATTCCGTGGATTGATGTAAGAATCCTAAGAGAAAATGCAAAGCATGCTTAGTCATGAATGGCACAAACAATAGAACTAATACCCCACCCTGCCTACACTATGGCAACAGCACAGGAGAATTTATACAAGAATGAATTTTCACTCTCTCACTCTTTCCAAAGCCTAAATCTACAGAGACACCATCCAACTAACCATGTCTTCAATGGAAAATCCTTTCGTCCACTTAATTAACACGCCAGATGAAATGGAAGTTTGTTTTGTGGGAAAAGAGAACGTAAAACCAAGGTCCCTTCTCCCACCTAGAA

Coding sequence (CDS)

ATGGCGGCCATTAACCGATACACTGATAACACGACGCCGGCTAACCCTGTTGTTTCTCCAGCCAAGCAATCCTTACCGCCGGCCAAAACCGCGGACTCTCAGTCCGTTCTCAAAAGGTTGCAGTCTGAGTTAATGGCTCTAATGATGAGCGGAGACTCTGGGATTTCAGCCTTTCCGGAGGAGGACAACATATTCTGCTGGAAAGGGACAATAACCGGAAGCAAAGACACAGTGTTTGAGGGAACAGAGTATAGACTATCCTTTTCGTTCCCTAACGATTACCCTTTTAAGCCACCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTCGACATTTATGGCAATATTTGCTTGGACATACTTCAGGATAAATGGTCATCAGCCTATGATGTGAGAACAATACTTCTATCCATCCAGAGTCTGCTTGGAGAACCAAACACAAGCTCACCTTTAAACACCCAAGCAGCCCAATTGTGGAGCAATCAAGAAGATTATAGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCAGCTTAG

Protein sequence

MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTAAA
Homology
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BLAST of Cp4.1LG05g04820 vs. Swiss-Prot
Match: UBC20_ARATH (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 3.6e-83
Identity = 151/180 (83.89%), Postives = 157/180 (87.22%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N Y  NT    P  + +KQ   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]
BLAST of Cp4.1LG05g04820 vs. Swiss-Prot
Match: UBC19_ARATH (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.8e-81
Identity = 149/181 (82.32%), Postives = 155/181 (85.64%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPAN-PVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N YT NT  A  P  + +KQS PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLN QAAQLWSNQE+YRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]
BLAST of Cp4.1LG05g04820 vs. Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-53
Identity = 97/150 (64.67%), Postives = 119/150 (79.33%), Query Frame = 1 

Query: 31  ADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSF 90
           +   SV KRLQSELM LMM    GISAFP+ DNIF W GTI G+KDTV+E  E+++S  F
Sbjct: 2   SQDHSVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKF 61

Query: 91  PNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTS 150
           P DYP+KPP VKFET CFHPNVD  GNICLDIL+DKWS  Y+VR++L+SIQSLLGEPN  
Sbjct: 62  PTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNE 121

Query: 151 SPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 181
           SPLN+ AA LWSNQ++Y+K+++K Y+  T+
Sbjct: 122 SPLNSYAASLWSNQDEYKKVLDKRYQEATS 151

[Close]
BLAST of Cp4.1LG05g04820 vs. Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.3e-51
Identity = 99/168 (58.93%), Postives = 119/168 (70.83%), Query Frame = 1 

Query: 8   TDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  PA   V+ A++   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPAATSVTAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPN  SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]
BLAST of Cp4.1LG05g04820 vs. Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 94/167 (56.29%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 10  NTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKG 69
           N  PA   V   ++      + +  SV KRLQ EL  L+MSGD GI+AFP+ DN+F W  
Sbjct: 5   NIDPAANQVRQKERPRDMTTSKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVA 64

Query: 70  TITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSS 129
           T+ G KDTV+E  +Y+L+  FP+DYP+KPP VKF T C+HPNVD  GNICLDIL++ W++
Sbjct: 65  TLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTA 124

Query: 130 AYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYK 177
           +YDVRTILLS+QSLLGEPN +SPLN QAA +WSNQ +Y+K++ + YK
Sbjct: 125 SYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEYKKVLHEKYK 171

[Close]
BLAST of Cp4.1LG05g04820 vs. TrEMBL
Match: A0A0A0KF07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434330 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.4e-97
Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG05g04820 vs. TrEMBL
Match: W9SLK9_9ROSA (Ubiquitin-conjugating enzyme E2 19 OS=Morus notabilis GN=L484_000487 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.1e-84
Identity = 157/181 (86.74%), Postives = 163/181 (90.06%), Query Frame = 1 

Query: 1   MAAINRYTD-NTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MAA+N Y + N T A P  +PAKQ LPPAKT DSQSVLKRLQSELMALMM GDSGISAFP
Sbjct: 1   MAAVNGYAETNNTTAGPNAAPAKQPLPPAKTVDSQSVLKRLQSELMALMMGGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120
           E DNIFCWKGTI GSKDTVFEGTEYRLS SF NDYPFKPPKVKFE  CFHPNVD++GNIC
Sbjct: 61  EGDNIFCWKGTIIGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFENVCFHPNVDLHGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLN+QAAQLWSNQEDYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEDYRKMVEKLYKPPT 180

[Close]
BLAST of Cp4.1LG05g04820 vs. TrEMBL
Match: A0A059ABV9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00733 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 8.7e-84
Identity = 159/188 (84.57%), Postives = 166/188 (88.30%), Query Frame = 1 

Query: 1   MAAIN--------RYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGD 60
           MAA+N        RY  NT  A P   P+KQ LP AK+ D+QSVLKRLQSELM+LMMSGD
Sbjct: 1   MAAVNSYAETPQERYQGNTPAAAP---PSKQPLPAAKSVDTQSVLKRLQSELMSLMMSGD 60

Query: 61  SGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNV 120
            GISAFPEEDNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNV
Sbjct: 61  PGISAFPEEDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETACFHPNV 120

Query: 121 DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVE 180
           DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQE+YRKMVE
Sbjct: 121 DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEEYRKMVE 180

[Close]
BLAST of Cp4.1LG05g04820 vs. TrEMBL
Match: A9PAG1_POPTR (Ubiquitin-conjugating enzyme 19 family protein OS=Populus trichocarpa GN=POPTR_0009s05420g PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 8.7e-84
Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAIN +T    PA    +P+KQ++P AKT D+QSVLKRLQSELMALMMSG+SGISAFPE
Sbjct: 1   MAAINGHTPVAAPAG--TTPSKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
            DNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  GDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 179

Query: 181 A 182
           A
Sbjct: 181 A 179

[Close]
BLAST of Cp4.1LG05g04820 vs. TrEMBL
Match: A0A067JQ62_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25961 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.5e-83
Identity = 152/180 (84.44%), Postives = 162/180 (90.00%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MA IN Y  NT  A P  + +KQ+LP   T D+QSVLKRLQSELM+LMMSG+SGISAFPE
Sbjct: 1   MATINGYQGNTPVATPAATQSKQTLPTVNTVDTQSVLKRLQSELMSLMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFK PKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKSPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]
BLAST of Cp4.1LG05g04820 vs. TAIR10
Match: AT1G50490.1 (AT1G50490.1 ubiquitin-conjugating enzyme 20)

HSP 1 Score: 308.9 bits (790), Expect = 2.1e-84
Identity = 151/180 (83.89%), Postives = 157/180 (87.22%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N Y  NT    P  + +KQ   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]
BLAST of Cp4.1LG05g04820 vs. TAIR10
Match: AT3G20060.1 (AT3G20060.1 ubiquitin-conjugating enzyme19)

HSP 1 Score: 301.6 bits (771), Expect = 3.3e-82
Identity = 149/181 (82.32%), Postives = 155/181 (85.64%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPAN-PVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N YT NT  A  P  + +KQS PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLN QAAQLWSNQE+YRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]
BLAST of Cp4.1LG05g04820 vs. TAIR10
Match: AT1G14400.1 (AT1G14400.1 ubiquitin carrier protein 1)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 62/135 (45.93%), Postives = 88/135 (65.19%), Query Frame = 1 

Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L     +GIS  P+++NI  W   I G  DT ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 158 AQLWS-NQEDYRKMV 172
           A+++S ++ +Y + V
Sbjct: 127 ARMYSESKREYNRRV 141

[Close]
BLAST of Cp4.1LG05g04820 vs. TAIR10
Match: AT2G02760.1 (AT2G02760.1 ubiquiting-conjugating enzyme 2)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 62/138 (44.93%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L     +GIS  P+++NI  W   I G  DT ++G  ++LS  F  DYP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  IL SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 158 AQLWS-NQEDYRKMVEKL 175
           A+++S ++ +Y + V ++
Sbjct: 127 ARMFSESKREYNRRVREV 144

[Close]
BLAST of Cp4.1LG05g04820 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3)

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-29
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1 

Query: 38  KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFK 97
           KRL  +   L      GIS  P+++NI  W   I G +DT ++G  ++L+  F  DYP K
Sbjct: 7   KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66

Query: 98  PPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQA 157
           PP V+F +  FHPN+   G+ICLDILQ++WS  YDV  +L SIQSLL +PN  SP N +A
Sbjct: 67  PPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEA 126

Query: 158 AQLWS-NQEDY-RKMVE 173
           A+L+S N+ +Y RK++E
Sbjct: 127 ARLFSENKREYNRKVIE 143

[Close]
BLAST of Cp4.1LG05g04820 vs. NCBI nr
Match: gi|449444891|ref|XP_004140207.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 2.0e-97
Identity = 176/181 (97.24%), Postives = 179/181 (98.90%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG05g04820 vs. NCBI nr
Match: gi|703087021|ref|XP_010093163.1| (Ubiquitin-conjugating enzyme E2 19 [Morus notabilis])

HSP 1 Score: 318.5 bits (815), Expect = 7.4e-84
Identity = 157/181 (86.74%), Postives = 163/181 (90.06%), Query Frame = 1 

Query: 1   MAAINRYTD-NTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MAA+N Y + N T A P  +PAKQ LPPAKT DSQSVLKRLQSELMALMM GDSGISAFP
Sbjct: 1   MAAVNGYAETNNTTAGPNAAPAKQPLPPAKTVDSQSVLKRLQSELMALMMGGDSGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNIC 120
           E DNIFCWKGTI GSKDTVFEGTEYRLS SF NDYPFKPPKVKFE  CFHPNVD++GNIC
Sbjct: 61  EGDNIFCWKGTIIGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFENVCFHPNVDLHGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPN SSPLN+QAAQLWSNQEDYRKMVEKLYKPPT
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEDYRKMVEKLYKPPT 180

[Close]
BLAST of Cp4.1LG05g04820 vs. NCBI nr
Match: gi|1009114721|ref|XP_015873839.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba])

HSP 1 Score: 318.5 bits (815), Expect = 7.4e-84
Identity = 155/185 (83.78%), Postives = 165/185 (89.19%), Query Frame = 1 

Query: 1   MAAINRYTDN-----TTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGI 60
           MAA+N +++      T       +P KQSLPPAKT DSQSVLKRLQSELMALMMSGDSGI
Sbjct: 1   MAAVNGFSETGHGYQTNTPVTAAAPTKQSLPPAKTVDSQSVLKRLQSELMALMMSGDSGI 60

Query: 61  SAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIY 120
           SAFPEEDNIFCWKGTI GSKDTVFEGTEYRLS SFPNDYPFKPPKVKFETGCFHPNVD+Y
Sbjct: 61  SAFPEEDNIFCWKGTIIGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDVY 120

Query: 121 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLY 180
           GNICLDILQDKWSSAYDVRT+L+SIQSLLGEPN SSPLNTQAAQLW+NQE+YRKMVEKLY
Sbjct: 121 GNICLDILQDKWSSAYDVRTVLISIQSLLGEPNISSPLNTQAAQLWNNQEEYRKMVEKLY 180

[Close]
BLAST of Cp4.1LG05g04820 vs. NCBI nr
Match: gi|702475175|ref|XP_010031754.1| (PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Eucalyptus grandis])

HSP 1 Score: 317.8 bits (813), Expect = 1.3e-83
Identity = 159/188 (84.57%), Postives = 166/188 (88.30%), Query Frame = 1 

Query: 1   MAAIN--------RYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGD 60
           MAA+N        RY  NT  A P   P+KQ LP AK+ D+QSVLKRLQSELM+LMMSGD
Sbjct: 1   MAAVNSYAETPQERYQGNTPAAAP---PSKQPLPAAKSVDTQSVLKRLQSELMSLMMSGD 60

Query: 61  SGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNV 120
            GISAFPEEDNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNV
Sbjct: 61  PGISAFPEEDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETACFHPNV 120

Query: 121 DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVE 180
           DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQE+YRKMVE
Sbjct: 121 DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEEYRKMVE 180

[Close]
BLAST of Cp4.1LG05g04820 vs. NCBI nr
Match: gi|224106219|ref|XP_002314089.1| (ubiquitin-conjugating enzyme 19 family protein [Populus trichocarpa])

HSP 1 Score: 317.8 bits (813), Expect = 1.3e-83
Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 1 

Query: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAIN +T    PA    +P+KQ++P AKT D+QSVLKRLQSELMALMMSG+SGISAFPE
Sbjct: 1   MAAINGHTPVAAPAG--TTPSKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120
            DNIFCWKGTITGSKDTVFEGTEY+LS SFPNDYPFKPPKVKFET CFHPNVD+YGNICL
Sbjct: 61  GDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 179

Query: 181 A 182
           A
Sbjct: 181 A 179

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g04820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC20_ARATH3.6e-8383.89Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1[more]
UBC19_ARATH5.8e-8182.32Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1[more]
UBE2C_DICDI2.3e-5364.67Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c ... [more]
UBE2C_MACFA6.3e-5158.93Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1[more]
UBE2C_SPISO1.1e-5056.29Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1[more]
BLAST of Cp4.1LG05g04820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF07_CUCSA1.4e-9797.24Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434330 PE=3 SV=1[more]
W9SLK9_9ROSA5.1e-8486.74Ubiquitin-conjugating enzyme E2 19 OS=Morus notabilis GN=L484_000487 PE=3 SV=1[more]
A0A059ABV9_EUCGR8.7e-8484.57Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00733 PE=3 SV=1[more]
A9PAG1_POPTR8.7e-8485.64Ubiquitin-conjugating enzyme 19 family protein OS=Populus trichocarpa GN=POPTR_0... [more]
A0A067JQ62_JATCU2.5e-8384.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25961 PE=3 SV=1[more]
BLAST of Cp4.1LG05g04820 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G50490.12.1e-8483.89 ubiquitin-conjugating enzyme 20[more]
AT3G20060.13.3e-8282.32 ubiquitin-conjugating enzyme19[more]
AT1G14400.11.3e-3045.93 ubiquitin carrier protein 1[more]
AT2G02760.11.3e-3044.93 ubiquiting-conjugating enzyme 2[more]
AT5G62540.11.4e-2946.72 ubiquitin-conjugating enzyme 3[more]
BLAST of Cp4.1LG05g04820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444891|ref|XP_004140207.1|2.0e-9797.24PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Cucumis sativus][more]
gi|703087021|ref|XP_010093163.1|7.4e-8486.74Ubiquitin-conjugating enzyme E2 19 [Morus notabilis][more]
gi|1009114721|ref|XP_015873839.1|7.4e-8483.78PREDICTED: ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba][more]
gi|702475175|ref|XP_010031754.1|1.3e-8384.57PREDICTED: ubiquitin-conjugating enzyme E2 20-like [Eucalyptus grandis][more]
gi|224106219|ref|XP_002314089.1|1.3e-8385.64ubiquitin-conjugating enzyme 19 family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009690 cytokinin metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0015979 photosynthesis
biological_process GO:0031145 anaphase-promoting complex-dependent catabolic process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0030071 regulation of mitotic metaphase/anaphase transition
cellular_component GO:0005634 nucleus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0010007 magnesium chelatase complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0016851 magnesium chelatase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g04820.1Cp4.1LG05g04820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 39..173
score: 5.5
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 38..170
score: 3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 26..174
score: 2.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 28..174
score: 3.28
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 108..123
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 15..173
score: 3.3
NoneNo IPR availablePANTHERPTHR24067:SF121SUBFAMILY NOT NAMEDcoord: 15..173
score: 3.3
NoneNo IPR availableSMARTSM00212ubc_7coord: 38..180
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g04820Cucsa.124010Cucumber (Gy14) v1cgycpeB0319
Cp4.1LG05g04820CmaCh20G000990Cucurbita maxima (Rimu)cmacpeB586
Cp4.1LG05g04820CmaCh02G012670Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g04820CmoCh20G001030Cucurbita moschata (Rifu)cmocpeB535
Cp4.1LG05g04820CmoCh02G013070Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g04820Cla008564Watermelon (97103) v1cpewmB723
Cp4.1LG05g04820Csa6G434330Cucumber (Chinese Long) v2cpecuB742
Cp4.1LG05g04820MELO3C014573Melon (DHL92) v3.5.1cpemeB696
Cp4.1LG05g04820ClCG02G023030Watermelon (Charleston Gray)cpewcgB644
Cp4.1LG05g04820CSPI06G23980Wild cucumber (PI 183967)cpecpiB744
Cp4.1LG05g04820MELO3C014573.2Melon (DHL92) v3.6.1cpemedB829
Cp4.1LG05g04820CsaV3_6G039130Cucumber (Chinese Long) v3cpecucB0921
Cp4.1LG05g04820CsGy6G023340Cucumber (Gy14) v2cgybcpeB845
Cp4.1LG05g04820Carg06891Silver-seed gourdcarcpeB0741
Cp4.1LG05g04820Carg02694Silver-seed gourdcarcpeB1283
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g04820Cp4.1LG16g08660Cucurbita pepo (Zucchini)cpecpeB310
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g04820Cucumber (Chinese Long) v3cpecucB0877
Cp4.1LG05g04820Wax gourdcpewgoB0944
Cp4.1LG05g04820Cucurbita pepo (Zucchini)cpecpeB369
Cp4.1LG05g04820Cucurbita pepo (Zucchini)cpecpeB493
Cp4.1LG05g04820Cucurbita maxima (Rimu)cmacpeB098
Cp4.1LG05g04820Cucurbita maxima (Rimu)cmacpeB158
Cp4.1LG05g04820Cucurbita moschata (Rifu)cmocpeB074
Cp4.1LG05g04820Cucurbita moschata (Rifu)cmocpeB134
Cp4.1LG05g04820Bottle gourd (USVL1VR-Ls)cpelsiB598
Cp4.1LG05g04820Cucumber (Gy14) v2cgybcpeB137