Cp4.1LG16g08610 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g08610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	LATERAL ROOT PRIMORDIUM 1 family protein
Location	Cp4.1LG16 : 8171896 .. 8174131 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGCAGAGTCTCCCATTTCTTCTCTCTCTCTCTCTCTCCCATAAACTCCACTTTTTGTTTGTGCTCCACCAAAAAGCCAAAGTTTGTGGCAGTAATCAGCGAGCAGCGGAAGAGTAAGCAGAAGCAGAAGCAGAAGCAGAAGCGGCACAGCAGAAGCAGCAGCATTTCATCCGGTGCTTAATACAAAAGAGAATGAAGATTACAAAAGGCTCCATGAACCCAACCCATCTCTGCTAATTTTGCCTTTTGTTTTTCTTTTTAATCCCTTNAAAAACAAAAAACAAAGAAAAAAATCTCCCCCTTCTTCCCTCCTTTTTCTGTCTACAAAATCTCTCTGCTAGAAATTCAGAGAGACCCCACATCCATATAACGCCTACATAGATTGAGTTCCACGATCCCAAATCTTTTTCTTCAAACCCCAAACCCAAACTGTATATATTTTCCCCTCATTTTCCCAATTTCTTTTGTTTCTATCTCAATTTTATATTTATTTTTATCATTTCTTATCTTGTTTTTCCATATATAAACCCATCCGCCTTCAGTTGTGGCTACTACAAGGAGGTTACCTTCTGATTCCGGTGCTTTTGCTGACTGGGCGGCTCCGTCTTCCTCCGCCGGCCGCGCTCCCCCTGATGACCTCTCTCTTGGCTTCAATGCCGCTCCTGCTGTCGCGCCACCTGCCGGACCCCCTGCCCCTTTGTGGTCCGCTGCGGCTGCCGCTCAGAGGTCTCTCAATTATGGCCTTGGATCGGAGATGGGAATGGTCGGGTTACGAGATGTGTATGTTGTCGCTCCGGCTGCCTCTTTTAATCCAAATCCTCACCATCACGACCCTAATCTCATCTCTGATGATCATTCCCTTGCCGCCTCTAACTCCGCCACTGCCCTCGGTGTCGGAGTAGGCGTCGGTGTTATTCCGCTTCTCACTGCTGGCCCCTGCCTCGGCGTTGAGGAGGATAATCTCTTGGGTAGTCGCAGTGGTAGCAGAGGCGGAGGGATTCAGCTATGGCAGCAGAATCAGCAATCGACGCAACATTATTTGAAGAAAACGCCGTCGTCTTCTCTCGACCATCACCTCCATAATGCCTCCGGTACGAACAACGACCTTATCGGAGGAGGAATCGGCGTCTTTGGAGGTTTAGCTTCGTCGTCCTCGGCGACGACCACGTGCCAGGACTGTGGGAACCAAGCGAAGAAAGATTGTAGTCGTGGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCGCGACTCACGTGAAGAGCACGTGGGTTCCTGCAGCCCGCCGGAGAGAGCGACAGCTCATGGCCATCACCGGAACCGCCGCAGATGGCTCTTCAGGTTCCGCCTCCGGCACGAAGAAACCGAGGCTTATAGCCTCGCAAACCACTTCTCACACTTCCACATCTAACACCACACCTCCAGGAAGCATCGACACGAGCTCCAGTCATCAAGGTAAGAATAATTGCCCCAAAATTTAGGGTTCCTTGTTTTTCGGCGTTTTTTCCCCCATAAACTACGGATATTTTTTTATTCCTCGAATCGTTTGGTTCAGATGCAGGATTTAAAGAGGAATTACCAGGCCAAATACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTGACGGCGGTGGATGACGGCGAGGACGAGTACGCGTATCAAGCGGTCGTGAAGATCGGGGGCCATGTTTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGATGGCTTTCCTAATGTATCGGAACTGCATTTGAGCGACGGCGGCGGTGGGAGCAGAAATAATCGGAATGGATCTTCTTCTGCTCCGTTTGTCGATCCATCGGATGTTTACAACGCGGCCGCCTCCGGCAATGGTGGTGCTCCAGGTTTTCTCGGTGGTTCAAATTATGGTAATCAAATCCGCTGATATATTTTATTCTAATTTTCTTAACGGTTCAAGGTTCTTCCCAGAATCAATTGGAAGCCAAGGATCTGCAACTGTGTAATCTCATCGGACTCTTCTTCCTTTTCTACTAACCCAATTTTCCCTTGAATCCAATTTATTTATGTCTCATCATCTTCTTGGACTGATTCAGATTGTGTATATCTCACTTCTTTCAACAAATTCTCCTTACTCAATATTCAACTCTTTTCATGCCTTTGATCTTTCACCTTCCATTATTGATCTCTCAATTATTTATTCTATTATTTTTTTGTTCTTGATGCAAATTTGTTGGTT

mRNA sequence

ATGAACGGCAGAGTCTCCCATTTCTTCTCTCTCTCTCTCTCTCCCATAAACTCCACTTTTTGTTTGTGCTCCACCAAAAAGCCAAAGTTTGTGGCAGTAATCAGCGAGCAGCGGAAGAGTAAGCAGAAGCAGAAGCAGAAGCAGAAGCGGCACAGCAGAAGCAGCAGCATTTCATCCGTTGTGGCTACTACAAGGAGGTTACCTTCTGATTCCGGTGCTTTTGCTGACTGGGCGGCTCCGTCTTCCTCCGCCGGCCGCGCTCCCCCTGATGACCTCTCTCTTGGCTTCAATGCCGCTCCTGCTGTCGCGCCACCTGCCGGACCCCCTGCCCCTTTGTGGTCCGCTGCGGCTGCCGCTCAGAGGTCTCTCAATTATGGCCTTGGATCGGAGATGGGAATGGTCGGGTTACGAGATGTGTATGTTGTCGCTCCGGCTGCCTCTTTTAATCCAAATCCTCACCATCACGACCCTAATCTCATCTCTGATGATCATTCCCTTGCCGCCTCTAACTCCGCCACTGCCCTCGGTGTCGGAGTAGGCGTCGGTGTTATTCCGCTTCTCACTGCTGGCCCCTGCCTCGGCGTTGAGGAGGATAATCTCTTGGGTAGTCGCAGTGGTAGCAGAGGCGGAGGGATTCAGCTATGGCAGCAGAATCAGCAATCGACGCAACATTATTTGAAGAAAACGCCGTCGTCTTCTCTCGACCATCACCTCCATAATGCCTCCGGTACGAACAACGACCTTATCGGAGGAGGAATCGGCGTCTTTGGAGGTTTAGCTTCGTCGTCCTCGGCGACGACCACGTGCCAGGACTGTGGGAACCAAGCGAAGAAAGATTGTAGTCGTGGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCGCGACTCACGTGAAGAGCACGTGGGTTCCTGCAGCCCGCCGGAGAGAGCGACAGCTCATGGCCATCACCGGAACCGCCGCAGATGGCTCTTCAGGTTCCGCCTCCGGCACGAAGAAACCGAGGCTTATAGCCTCGCAAACCACTTCTCACACTTCCACATCTAACACCACACCTCCAGGAAGCATCGACACGAGCTCCAGTCATCAAGATGCAGGATTTAAAGAGGAATTACCAGGCCAAATACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTGACGGCGGTGGATGACGGCGAGGACGAGTACGCGTATCAAGCGGTCGTGAAGATCGGGGGCCATGTTTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGATGGCTTTCCTAATGTATCGGAACTGCATTTGAGCGACGGCGGCGGTGGGAGCAGAAATAATCGGAATGGATCTTCTTCTGCTCCGTTTGTCGATCCATCGGATGTTTACAACGCGGCCGCCTCCGGCAATGGTGGTGCTCCAGGTTTTCTCGGTGGTTCAAATTATGGTAATCAAATCCGCTGATATATTTTATTCTAATTTTCTTAACGGTTCAAGGTTCTTCCCAGAATCAATTGGAAGCCAAGGATCTGCAACTGTGTAATCTCATCGGACTCTTCTTCCTTTTCTACTAACCCAATTTTCCCTTGAATCCAATTTATTTATGTCTCATCATCTTCTTGGACTGATTCAGATTGTGTATATCTCACTTCTTTCAACAAATTCTCCTTACTCAATATTCAACTCTTTTCATGCCTTTGATCTTTCACCTTCCATTATTGATCTCTCAATTATTTATTCTATTATTTTTTTGTTCTTGATGCAAATTTGTTGGTT

Coding sequence (CDS)

ATGAACGGCAGAGTCTCCCATTTCTTCTCTCTCTCTCTCTCTCCCATAAACTCCACTTTTTGTTTGTGCTCCACCAAAAAGCCAAAGTTTGTGGCAGTAATCAGCGAGCAGCGGAAGAGTAAGCAGAAGCAGAAGCAGAAGCAGAAGCGGCACAGCAGAAGCAGCAGCATTTCATCCGTTGTGGCTACTACAAGGAGGTTACCTTCTGATTCCGGTGCTTTTGCTGACTGGGCGGCTCCGTCTTCCTCCGCCGGCCGCGCTCCCCCTGATGACCTCTCTCTTGGCTTCAATGCCGCTCCTGCTGTCGCGCCACCTGCCGGACCCCCTGCCCCTTTGTGGTCCGCTGCGGCTGCCGCTCAGAGGTCTCTCAATTATGGCCTTGGATCGGAGATGGGAATGGTCGGGTTACGAGATGTGTATGTTGTCGCTCCGGCTGCCTCTTTTAATCCAAATCCTCACCATCACGACCCTAATCTCATCTCTGATGATCATTCCCTTGCCGCCTCTAACTCCGCCACTGCCCTCGGTGTCGGAGTAGGCGTCGGTGTTATTCCGCTTCTCACTGCTGGCCCCTGCCTCGGCGTTGAGGAGGATAATCTCTTGGGTAGTCGCAGTGGTAGCAGAGGCGGAGGGATTCAGCTATGGCAGCAGAATCAGCAATCGACGCAACATTATTTGAAGAAAACGCCGTCGTCTTCTCTCGACCATCACCTCCATAATGCCTCCGGTACGAACAACGACCTTATCGGAGGAGGAATCGGCGTCTTTGGAGGTTTAGCTTCGTCGTCCTCGGCGACGACCACGTGCCAGGACTGTGGGAACCAAGCGAAGAAAGATTGTAGTCGTGGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCGCGACTCACGTGAAGAGCACGTGGGTTCCTGCAGCCCGCCGGAGAGAGCGACAGCTCATGGCCATCACCGGAACCGCCGCAGATGGCTCTTCAGGTTCCGCCTCCGGCACGAAGAAACCGAGGCTTATAGCCTCGCAAACCACTTCTCACACTTCCACATCTAACACCACACCTCCAGGAAGCATCGACACGAGCTCCAGTCATCAAGATGCAGGATTTAAAGAGGAATTACCAGGCCAAATACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTGACGGCGGTGGATGACGGCGAGGACGAGTACGCGTATCAAGCGGTCGTGAAGATCGGGGGCCATGTTTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGATGGCTTTCCTAATGTATCGGAACTGCATTTGAGCGACGGCGGCGGTGGGAGCAGAAATAATCGGAATGGATCTTCTTCTGCTCCGTTTGTCGATCCATCGGATGTTTACAACGCGGCCGCCTCCGGCAATGGTGGTGCTCCAGGTTTTCTCGGTGGTTCAAATTATGGTAATCAAATCCGCTGA

Protein sequence

MNGRVSHFFSLSLSPINSTFCLCSTKKPKFVAVISEQRKSKQKQKQKQKRHSRSSSISSVVATTRRLPSDSGAFADWAAPSSSAGRAPPDDLSLGFNAAPAVAPPAGPPAPLWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNSATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPSSSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVEAGDGFPNVSELHLSDGGGGSRNNRNGSSSAPFVDPSDVYNAAASGNGGAPGFLGGSNYGNQIR

Homology

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BLAST of Cp4.1LG16g08610 vs. Swiss-Prot
Match: LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.4e-80
Identity = 193/355 (54.37%), Postives = 234/355 (65.92%), Query Frame = 1


Query: 131 MGMVGLRDVYVVAPAASFNPNPHHHDPNLIS-DDHSLAASNSATALGVGVGVGVIPLLTA 190
           MGMVGLRDV++VAPA       HH +  +IS  DH     NS  A    +GVGVIPLLTA
Sbjct: 1   MGMVGLRDVFLVAPAY------HHQNAGVISGSDHM----NSNAAAAAALGVGVIPLLTA 60

Query: 191 G-PCLGVEED--NLLGSRSGSRGGGIQLWQQNQQS--TQH-YLKKTPSSSLDHHLHNASG 250
           G P   VE+   N LG+         + WQ N  +  TQ+ + K T  +++        G
Sbjct: 61  GTPQQNVEDSDINFLGNN--------RRWQNNNNNHETQYLHFKSTNQTTV--------G 120

Query: 251 TNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKST 310
           T+++  G G G        +S T TCQDCGNQAKK+C + RCRTCC+SRGFDC+THVKST
Sbjct: 121 TSSNNSGSGSG--------ASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKST 180

Query: 311 WVPAARRRERQLMAITGTAADGSS-GSASGTKKPRLIASQ------TTSHTSTSNTTPPG 370
           WV AARRRERQ+M        GSS  ++SGTKKPR++ SQ       TSHTSTSN TPP 
Sbjct: 181 WVSAARRRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQ 240

Query: 371 SIDTSSSHQD-AGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFL 430
           S +TSSS QD  G +E  PGQ+RA AVFKCVRVTAV+DG+DEYAYQAVVKIGGHVFKGFL
Sbjct: 241 SFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFL 300

Query: 431 YDQGVEAGDGFPNVSELHLSDGGGGSRNNRNG-SSSAPFVDPSDVYNAAASGNGG 470
           YDQG+E  +GFP++S+LHL    GGS NN NG S+SAP +DP +V      G+GG
Sbjct: 301 YDQGLEPKEGFPSMSDLHL----GGSANNHNGVSASAPILDPPNVVYGGGGGSGG 316

[Close]

BLAST of Cp4.1LG16g08610 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.3e-38
Identity = 112/259 (43.24%), Postives = 143/259 (55.21%), Query Frame = 1


Query: 218 NQQSTQHYLKKTPSSSLDHHLHNASGTNNDLIGGG-IGVFGGLASSSSATTTCQDCGNQA 277
           N  S+Q   +  P   L HH  +    + DL  G  I V     SS S T +C+DCGNQA
Sbjct: 42  NPSSSQQVWQIPPEQMLMHHHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQA 101

Query: 278 KKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQL---MAITGTAADGSSGSA--S 337
           KKDC+  RCRTCC+SRGFDC+THV+STW+P ARRRERQ    M+ +G      SG A   
Sbjct: 102 KKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGG 161

Query: 338 GTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAV 397
           G+  P+     T   TS+S+  P  S        +A F    PG++ + A+F+CV+++ V
Sbjct: 162 GSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMG--EASF----PGEVSSDALFRCVKMSGV 221

Query: 398 DDGED-EYAYQAVVKIGGHVFKGFLYDQGVEA-----GDGFPNVSELHLSDGGGGSRNN- 457
           DDG D +YAYQ  V IGGH+FKG LYDQG E+     G G  +        GGGG   N 
Sbjct: 222 DDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPFNP 281

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BLAST of Cp4.1LG16g08610 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.9e-34
Identity = 109/274 (39.78%), Postives = 143/274 (52.19%), Query Frame = 1


Query: 202 GSRSGSRGGGIQLWQQ-NQQSTQHYLKKTPSSSLDHHLHNAS----GTNNDLIGGGIGVF 261
           G    S  G ++LWQ  N Q      ++     LD +   A      +N  LI    G  
Sbjct: 47  GEAGPSYKGTLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGAL 106

Query: 262 GGLASSS-SATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQL 321
             + S S S   +CQDCGNQ+KKDCS  RCRTCC+SRG DC THVKSTWVPAA+RRERQ 
Sbjct: 107 MMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQ 166

Query: 322 MAITGTAADGSSGSASGTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSHQDAGFKEELPG 381
              TG       GS    ++ R+ A      TS + T  P +   ++S  + G     P 
Sbjct: 167 QLSTGQQPQQLGGSVPKRQRERIPARS----TSMAYTRIPSN---NTSGLEVG---NFPP 226

Query: 382 QIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQG-VEAGDGFPNVSELHL 441
           ++ + AVF+CVRV++VDD E+EYAY+  V IGGHVFKG LYDQG  E          L+L
Sbjct: 227 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNL 286

Query: 442 SDGGGGS---------RNNRNGSSSAPFVDPSDV 460
              G  +          N   GS+S  ++DP+ +
Sbjct: 287 ITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASL 310

[Close]

BLAST of Cp4.1LG16g08610 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 6.4e-34
Identity = 96/260 (36.92%), Postives = 133/260 (51.15%), Query Frame = 1


Query: 203 SRSGSRGGGIQLWQQNQQSTQHYLKKTPSSSLDHHL-----------HNASGTNNDLIGG 262
           S S +  G ++LWQ + Q    +  +     LD +            HN    + +    
Sbjct: 60  SSSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTA 119

Query: 263 GIG-------VFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTW 322
           G G       +  G +   S   +CQDCGNQAKKDCS  RCRTCC+SRGF+C+THV+STW
Sbjct: 120 GAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTW 179

Query: 323 VPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSH 382
           VPAA+RRERQ    T           S  K+ R     T+S    +       ++  +  
Sbjct: 180 VPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGN-- 239

Query: 383 QDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYD--QGVEA 442
                    P ++ + AVF+CVRV++V+DGE+E+AYQ  V IGGH+FKG LYD   G   
Sbjct: 240 --------FPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSG 299

[Close]

BLAST of Cp4.1LG16g08610 vs. Swiss-Prot
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.6e-31
Identity = 102/273 (37.36%), Postives = 133/273 (48.72%), Query Frame = 1


Query: 216 QQNQQSTQHYLKKTPSSSLDHHLHNASGTNNDLIGGGIGVF-------GGLASSSSATTT 275
           QQ QQ  QH        S       +S  NN+     +          GG   +      
Sbjct: 65  QQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQGGMN 124

Query: 276 CQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSG 335
           CQDCGNQAKKDC   RCRTCC+SRGF C THVKSTWVPAA+RRER     +      SS 
Sbjct: 125 CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSASSR 184

Query: 336 SASGTKKPRLIASQTTSHTSTSNTTPPGS------IDTSSSHQDAGFKEELPGQIRAPAV 395
                K+ R  AS   ++    ++   GS      +  ++S+      + LP ++ +PA+
Sbjct: 185 ETQNAKRLR-EASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSPAI 244

Query: 396 FKCVRVTAVDDGEDE--YAYQAVVKIGGHVFKGFLYDQGVEAGDGF-----------PNV 455
           F+CVRV+++++ ED+  YAYQ  V IGGH+FKG LYDQG E  D              NV
Sbjct: 245 FRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATTTNV 304

Query: 456 SELHLSDGGGGSRNNRNGSSSAPFVDPSDVYNA 463
            E       G   NN NG      +DPS +Y A
Sbjct: 305 EETATKTVTG---NNNNGL----MLDPSSLYPA 329

[Close]

BLAST of Cp4.1LG16g08610 vs. TrEMBL
Match: A0A0A0KF01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G432270 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 9.2e-165
Identity = 314/375 (83.73%), Postives = 328/375 (87.47%), Query Frame = 1


Query: 112 LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 171
           +WSAAA  QRSLNYG GSEMGMVGLRDVYVVAPA+SFN NP  HD NL+SD HSLA SN 
Sbjct: 1   MWSAAA--QRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNP 60

Query: 172 ATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPS 231
           ATALGVGVGVGVIPLLTAGPCLGVEE+N  G+RS +RGGGIQ     QQSTQHYLKKTPS
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQF----QQSTQHYLKKTPS 120

Query: 232 SSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRS 291
            SLDH     SGTNN+LIGGGIG  GGLASSSSATTTCQDCGNQAKKDCS  RCRTCCRS
Sbjct: 121 GSLDH----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRS 180

Query: 292 RGFDCATHVKSTWVPAARRRERQLMAITGTAA-DGSSGSASGTKKPRLIASQTTSHTSTS 351
           RGFDCATHVKSTWVPAARRRERQLMA+T TAA DGSS S SG KKPRLI SQTTSHTSTS
Sbjct: 181 RGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTS 240

Query: 352 NTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHV 411
           NTTPP S+DTSSSHQDAG KE LPGQIRA AVFKCVRVTAVDDG+DEYAY A+VKIGGHV
Sbjct: 241 NTTPPRSLDTSSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHV 300

Query: 412 FKGFLYDQGVEAGDGFPNVSELHLSD--GGGGSRNNRNGSSSAPFVDPSDVYNAAASGNG 471
           FKGFLYDQGVEAGDGFPNVSELHL D  GGGG+ NNRNGSSS+P VDPSDVYN A SG+G
Sbjct: 301 FKGFLYDQGVEAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSG 360

Query: 472 GAPGFLGGSNYGNQI 484
           G PGFLGGSNYGNQI
Sbjct: 361 GVPGFLGGSNYGNQI 364

[Close]

BLAST of Cp4.1LG16g08610 vs. TrEMBL
Match: W9RQF7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001078 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 2.3e-139
Identity = 307/472 (65.04%), Postives = 337/472 (71.40%), Query Frame = 1


Query: 58  SSVVATTRRLPSDSGAFADWAAPSSSA--------------GRAPPDDLSLGFNAAPAVA 117
           SSVVATTRRLPSDSGAFADW A SSSA              G + PD+LSLGFNA P   
Sbjct: 23  SSVVATTRRLPSDSGAFADWVASSSSAAAAAAAAAAAAAGRGASVPDELSLGFNAGPTGG 82

Query: 118 PPAGPPAPLWSAA--AAAQRSLNYGLGSEMGMVGLRDVYVVAPAASF-NPNPHHH----- 177
              G PA   S+A  A + R +NYGL  EMGMVGLRDV+VVAPA+SF +PN HHH     
Sbjct: 83  --GGGPASSSSSALWAGSSRPINYGLPPEMGMVGLRDVFVVAPASSFHHPNHHHHHHHHA 142

Query: 178 DPNLISDDHSLAASNSATALGVGVGVGVIPLLTAGPCLGVEED---NLLGSRSGSR---- 237
           DP LI+D HSL  SN ATALGVGVGVGVIPLLTA PCLG  +D   N LG  + SR    
Sbjct: 143 DPYLIADHHSLNGSNPATALGVGVGVGVIPLLTATPCLGPVDDDSANALGGSTASRGRSG 202

Query: 238 -----------GGGIQLWQQNQQSTQHYLKKTPSSSLDHHLHNASGTNNDLI--GGGIGV 297
                      GGGIQLW QNQQ+ QH+ KK   + LD       G N +L+  GGG GV
Sbjct: 203 GGGGSGVAGGVGGGIQLW-QNQQNQQHFFKKPGINILD------QGINPNLVQSGGGGGV 262

Query: 298 FGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQL 357
            G   S SS+T TCQDCGNQAKKDC+  RCRTCC+SRGF+CATHVKSTWVPAARRRERQL
Sbjct: 263 IG---SGSSSTATCQDCGNQAKKDCTHRRCRTCCKSRGFECATHVKSTWVPAARRRERQL 322

Query: 358 MAITGTA-ADGSSGSASGTKKPRLIASQ--TTSHTSTSNTTPPGSIDTSSSHQDAGFKEE 417
           M + G A   GSSGS SG KKPRL ASQ  TTSHTSTSNTTPP S DTSSSHQD G+K+ 
Sbjct: 323 MNVAGAAVGPGSSGSTSGAKKPRLFASQTTTTSHTSTSNTTPPRSFDTSSSHQDVGYKDS 382

Query: 418 LPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVEAGDGFPNVSEL 477
           LPGQ+RAPAVFKCVRVTAV+DGEDEYAYQAVVKIGGHVFKGFLYDQGVE  +GFPN+SEL
Sbjct: 383 LPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVEPKEGFPNISEL 442

Query: 478 HLSDGGGGSRNNRNG-SSSAPFVDPSDVYNAAASGNGGAPGFLGGSNYGNQI 484
           HL  GGGG    RNG SSS+P +DPSDVY A+  G     G LGGS YGNQI
Sbjct: 443 HLGGGGGG----RNGASSSSPLLDPSDVYAASTGG-----GLLGGSGYGNQI 473

[Close]

BLAST of Cp4.1LG16g08610 vs. TrEMBL
Match: A0A061GZE9_THECC (Lateral root primordium protein-related isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_040941 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.1e-130
Identity = 288/441 (65.31%), Postives = 321/441 (72.79%), Query Frame = 1


Query: 60  VVATTRR-LPSDSGAFADWAAPSSSAGRAPPDDLSLGFNA-APAVAPPAGPPAPLWSAAA 119
           +VATTRR LPSDSGAFADWA  SS+A RA PDDLSLGFNA A A A   G     W  +A
Sbjct: 8   IVATTRRQLPSDSGAFADWATSSSTAIRAGPDDLSLGFNANAAAAAAAPGSTTAQWPPSA 67

Query: 120 AAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHH-----DPNLISDDHSLAASNSA 179
              R +NYGL  EMGMVGLRDV+VVAPA+SFN + HHH     DP + +D   +   N+A
Sbjct: 68  ---RQINYGLSHEMGMVGLRDVFVVAPASSFNHHHHHHHHHTQDPIMANDQ--INGQNAA 127

Query: 180 TALGVGVGVGVIPLLTAGPCLG---VEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKT 239
           TALGVGV    IPLLTA PCL    VE+ +LL +   ++  G+QLWQ NQ S+ HYLKK 
Sbjct: 128 TALGVGV----IPLLTATPCLASQNVEDSDLLSNNGRNKLSGMQLWQ-NQNSSSHYLKK- 187

Query: 240 PSSSLDHHLHNASGTNNDLIGGGIGVFGGLASS-SSATTTCQDCGNQAKKDCSRGRCRTC 299
           PSS  D++  N+S  N     GG G+ GG   S SS+ TTCQDCGNQAKKDC+  RCRTC
Sbjct: 188 PSSVPDNN--NSSSMNLIQSSGGGGMGGGSGGSGSSSGTTCQDCGNQAKKDCTHRRCRTC 247

Query: 300 CRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQ--TTSH 359
           C+SRGFDC THVKSTWV AARRRERQLM    TA  GSSGS SG KKPRLI SQ  TTSH
Sbjct: 248 CKSRGFDCPTHVKSTWVSAARRRERQLMVAAATAGAGSSGSTSGAKKPRLITSQTTTTSH 307

Query: 360 TSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKI 419
           TSTSNTTPP S DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAV+DGEDEYAYQAVVKI
Sbjct: 308 TSTSNTTPPRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKI 367

Query: 420 GGHVFKGFLYDQGVEAGDGFPNVSELHLSDGGGGSR----NNRNGSSSAPFVDPSDVYNA 479
           GGHVFKGFLYDQGVE  DGFPN+SELHL  GGGG          GSSS+P +DPS+VY  
Sbjct: 368 GGHVFKGFLYDQGVEGRDGFPNISELHLGGGGGGGNGGGSGRHGGSSSSPVLDPSEVY-- 427

Query: 480 AASGNGGAPGFLGGSNYGNQI 484
           AA+G     G L GS+YGN I
Sbjct: 428 AATGG----GLLAGSSYGNPI 429

[Close]

BLAST of Cp4.1LG16g08610 vs. TrEMBL
Match: A0A061GUQ3_THECC (Lateral root primordium protein-related isoform 1 OS=Theobroma cacao GN=TCM_040941 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.8e-129
Identity = 283/435 (65.06%), Postives = 316/435 (72.64%), Query Frame = 1


Query: 65  RRLPSDSGAFADWAAPSSSAGRAPPDDLSLGFNA-APAVAPPAGPPAPLWSAAAAAQRSL 124
           R+LPSDSGAFADWA  SS+A RA PDDLSLGFNA A A A   G     W  +A   R +
Sbjct: 17  RKLPSDSGAFADWATSSSTAIRAGPDDLSLGFNANAAAAAAAPGSTTAQWPPSA---RQI 76

Query: 125 NYGLGSEMGMVGLRDVYVVAPAASFNPNPHHH-----DPNLISDDHSLAASNSATALGVG 184
           NYGL  EMGMVGLRDV+VVAPA+SFN + HHH     DP + +D   +   N+ATALGVG
Sbjct: 77  NYGLSHEMGMVGLRDVFVVAPASSFNHHHHHHHHHTQDPIMANDQ--INGQNAATALGVG 136

Query: 185 VGVGVIPLLTAGPCLG---VEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPSSSLD 244
           V    IPLLTA PCL    VE+ +LL +   ++  G+QLWQ NQ S+ HYLKK PSS  D
Sbjct: 137 V----IPLLTATPCLASQNVEDSDLLSNNGRNKLSGMQLWQ-NQNSSSHYLKK-PSSVPD 196

Query: 245 HHLHNASGTNNDLIGGGIGVFGGL-ASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGF 304
           +  +N+S  N     GG G+ GG   S SS+ TTCQDCGNQAKKDC+  RCRTCC+SRGF
Sbjct: 197 N--NNSSSMNLIQSSGGGGMGGGSGGSGSSSGTTCQDCGNQAKKDCTHRRCRTCCKSRGF 256

Query: 305 DCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQ--TTSHTSTSNT 364
           DC THVKSTWV AARRRERQLM    TA  GSSGS SG KKPRLI SQ  TTSHTSTSNT
Sbjct: 257 DCPTHVKSTWVSAARRRERQLMVAAATAGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNT 316

Query: 365 TPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFK 424
           TPP S DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAV+DGEDEYAYQAVVKIGGHVFK
Sbjct: 317 TPPRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFK 376

Query: 425 GFLYDQGVEAGDGFPNVSELHLSDGGGGSR----NNRNGSSSAPFVDPSDVYNAAASGNG 484
           GFLYDQGVE  DGFPN+SELHL  GGGG          GSSS+P +DPS+VY  AA+G  
Sbjct: 377 GFLYDQGVEGRDGFPNISELHLGGGGGGGNGGGSGRHGGSSSSPVLDPSEVY--AATGG- 432

[Close]

BLAST of Cp4.1LG16g08610 vs. TrEMBL
Match: A5BRG1_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_006086 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.0e-119
Identity = 249/378 (65.87%), Postives = 287/378 (75.93%), Query Frame = 1


Query: 112 LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 171
           +WS+++   R +NYGL  EMGMVGLRDV+VVAPA+SF+ N + HDP +ISD H++  SN+
Sbjct: 1   MWSSSS---RQINYGLPHEMGMVGLRDVFVVAPASSFHHN-NQHDP-IISDPHAINGSNA 60

Query: 172 ATALGVGVGVGVIPLLTAGPCL------GVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHY 231
           ATALGVGVGVGVIPLLTA PCL      GV+E ++LG RS  +GGGIQ WQ  Q    +Y
Sbjct: 61  ATALGVGVGVGVIPLLTAAPCLAPSSMGGVDEADMLGHRS--KGGGIQFWQNQQTQHANY 120

Query: 232 LKKTPSSSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRC 291
           LKK     LDH+      ++++L+  G+G  G    +++  TTCQDCGNQAKKDCS  RC
Sbjct: 121 LKKP--MILDHN------SSSNLLSCGVGGVGASGPTTAGGTTCQDCGNQAKKDCSHRRC 180

Query: 292 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQ--T 351
           RTCC+SRGFDCATHVKSTWVPAARRRERQLM ++ T   GSSGS SG KKPRLI SQ  T
Sbjct: 181 RTCCKSRGFDCATHVKSTWVPAARRRERQLM-VSVTPGAGSSGSTSGAKKPRLITSQTTT 240

Query: 352 TSHTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAV 411
           TSHTSTSNTTPP S DTSSSHQDA FKE LPGQ+RAPAVFKCVRVTAVDDGEDEYAYQAV
Sbjct: 241 TSHTSTSNTTPPRSFDTSSSHQDASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAV 300

Query: 412 VKIGGHVFKGFLYDQGVEAGDGFPNVSELHL--SDGGGGSRNNRNGSSSAPFVDPSDVYN 471
           VKIGGHVFKGFLYDQG+E  DGFPN+SELHL    G GG    RNG +S+P +DP D Y 
Sbjct: 301 VKIGGHVFKGFLYDQGLETRDGFPNISELHLGGGSGSGGGGGARNGGTSSPILDPPDXY- 356

Query: 472 AAASGNGGAPGFLGGSNY 480
            AASG     G LGGS+Y
Sbjct: 361 -AASGG----GLLGGSSY 356

[Close]

BLAST of Cp4.1LG16g08610 vs. TAIR10
Match: AT5G12330.4 (AT5G12330.4 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 331.6 bits (849), Expect = 7.9e-91
Identity = 230/439 (52.39%), Postives = 279/439 (63.55%), Query Frame = 1


Query: 61  VATTRR--LP-SDSGAFADWAAPSSSAGRAPPDDLSLGFNAAPAV------APPAGPPAP 120
           VATTRR  LP SDSGAF DWAA +++  RA  +DLSLGFNA  +V      +       P
Sbjct: 9   VATTRRHNLPTSDSGAFTDWAATTTTPSRAT-EDLSLGFNAGSSVIHGGLGSASVAAGVP 68

Query: 121 LWSAAAAAQRSLNYGLGS-----EMGMVGLRDVYVVAPAASFNPNPHHHDPNLIS-DDHS 180
            W   +    S+ YGL S     EMGMVGLRDV++VAPA       HH +  +IS  DH 
Sbjct: 69  SWPPGS----SVRYGLPSSAAATEMGMVGLRDVFLVAPAY------HHQNAGVISGSDHM 128

Query: 181 LAASNSATALGVGVGVGVIPLLTAG-PCLGVEED--NLLGSRSGSRGGGIQLWQQNQQS- 240
               NS  A    +GVGVIPLLTAG P   VE+   N LG+         + WQ N  + 
Sbjct: 129 ----NSNAAAAAALGVGVIPLLTAGTPQQNVEDSDINFLGNN--------RRWQNNNNNH 188

Query: 241 -TQH-YLKKTPSSSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKD 300
            TQ+ + K T  +++        GT+++  G G G        +S T TCQDCGNQAKK+
Sbjct: 189 ETQYLHFKSTNQTTV--------GTSSNNSGSGSG--------ASGTATCQDCGNQAKKE 248

Query: 301 CSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSS-GSASGTKKPRL 360
           C + RCRTCC+SRGFDC+THVKSTWV AARRRERQ+M        GSS  ++SGTKKPR+
Sbjct: 249 CKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPTGANPTAGSSLSTSSGTKKPRI 308

Query: 361 IASQ------TTSHTSTSNTTPPGSIDTSSSHQD-AGFKEELPGQIRAPAVFKCVRVTAV 420
           + SQ       TSHTSTSN TPP S +TSSS QD  G +E  PGQ+RA AVFKCVRVTAV
Sbjct: 309 VGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAV 368

Query: 421 DDGEDEYAYQAVVKIGGHVFKGFLYDQGVEAGDGFPNVSELHLSDGGGGSRNNRNG-SSS 470
           +DG+DEYAYQAVVKIGGHVFKGFLYDQG+E  +GFP++S+LHL    GGS NN NG S+S
Sbjct: 369 EDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHL----GGSANNHNGVSAS 403

[Close]

BLAST of Cp4.1LG16g08610 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-39
Identity = 112/259 (43.24%), Postives = 143/259 (55.21%), Query Frame = 1


Query: 218 NQQSTQHYLKKTPSSSLDHHLHNASGTNNDLIGGG-IGVFGGLASSSSATTTCQDCGNQA 277
           N  S+Q   +  P   L HH  +    + DL  G  I V     SS S T +C+DCGNQA
Sbjct: 42  NPSSSQQVWQIPPEQMLMHHHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQA 101

Query: 278 KKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQL---MAITGTAADGSSGSA--S 337
           KKDC+  RCRTCC+SRGFDC+THV+STW+P ARRRERQ    M+ +G      SG A   
Sbjct: 102 KKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGG 161

Query: 338 GTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAV 397
           G+  P+     T   TS+S+  P  S        +A F    PG++ + A+F+CV+++ V
Sbjct: 162 GSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMG--EASF----PGEVSSDALFRCVKMSGV 221

Query: 398 DDGED-EYAYQAVVKIGGHVFKGFLYDQGVEA-----GDGFPNVSELHLSDGGGGSRNN- 457
           DDG D +YAYQ  V IGGH+FKG LYDQG E+     G G  +        GGGG   N 
Sbjct: 222 DDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDHQSSSAGGGGGGHPFNP 281

[Close]

BLAST of Cp4.1LG16g08610 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-35
Identity = 109/274 (39.78%), Postives = 143/274 (52.19%), Query Frame = 1


Query: 202 GSRSGSRGGGIQLWQQ-NQQSTQHYLKKTPSSSLDHHLHNAS----GTNNDLIGGGIGVF 261
           G    S  G ++LWQ  N Q      ++     LD +   A      +N  LI    G  
Sbjct: 47  GEAGPSYKGTLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGAL 106

Query: 262 GGLASSS-SATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQL 321
             + S S S   +CQDCGNQ+KKDCS  RCRTCC+SRG DC THVKSTWVPAA+RRERQ 
Sbjct: 107 MMMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQ 166

Query: 322 MAITGTAADGSSGSASGTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSHQDAGFKEELPG 381
              TG       GS    ++ R+ A      TS + T  P +   ++S  + G     P 
Sbjct: 167 QLSTGQQPQQLGGSVPKRQRERIPARS----TSMAYTRIPSN---NTSGLEVG---NFPP 226

Query: 382 QIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQG-VEAGDGFPNVSELHL 441
           ++ + AVF+CVRV++VDD E+EYAY+  V IGGHVFKG LYDQG  E          L+L
Sbjct: 227 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNL 286

Query: 442 SDGGGGS---------RNNRNGSSSAPFVDPSDV 460
              G  +          N   GS+S  ++DP+ +
Sbjct: 287 ITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASL 310

[Close]

BLAST of Cp4.1LG16g08610 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 146.7 bits (369), Expect = 3.6e-35
Identity = 96/260 (36.92%), Postives = 133/260 (51.15%), Query Frame = 1


Query: 203 SRSGSRGGGIQLWQQNQQSTQHYLKKTPSSSLDHHL-----------HNASGTNNDLIGG 262
           S S +  G ++LWQ + Q    +  +     LD +            HN    + +    
Sbjct: 60  SSSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTA 119

Query: 263 GIG-------VFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTW 322
           G G       +  G +   S   +CQDCGNQAKKDCS  RCRTCC+SRGF+C+THV+STW
Sbjct: 120 GAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTW 179

Query: 323 VPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSHTSTSNTTPPGSIDTSSSH 382
           VPAA+RRERQ    T           S  K+ R     T+S    +       ++  +  
Sbjct: 180 VPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGN-- 239

Query: 383 QDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYD--QGVEA 442
                    P ++ + AVF+CVRV++V+DGE+E+AYQ  V IGGH+FKG LYD   G   
Sbjct: 240 --------FPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSG 299

[Close]

BLAST of Cp4.1LG16g08610 vs. TAIR10
Match: AT1G75520.1 (AT1G75520.1 SHI-related sequence 5)

HSP 1 Score: 136.3 bits (342), Expect = 4.9e-32
Identity = 102/273 (37.36%), Postives = 133/273 (48.72%), Query Frame = 1


Query: 216 QQNQQSTQHYLKKTPSSSLDHHLHNASGTNNDLIGGGIGVF-------GGLASSSSATTT 275
           QQ QQ  QH        S       +S  NN+     +          GG   +      
Sbjct: 65  QQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQGGMN 124

Query: 276 CQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSG 335
           CQDCGNQAKKDC   RCRTCC+SRGF C THVKSTWVPAA+RRER     +      SS 
Sbjct: 125 CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSASSR 184

Query: 336 SASGTKKPRLIASQTTSHTSTSNTTPPGS------IDTSSSHQDAGFKEELPGQIRAPAV 395
                K+ R  AS   ++    ++   GS      +  ++S+      + LP ++ +PA+
Sbjct: 185 ETQNAKRLR-EASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSPAI 244

Query: 396 FKCVRVTAVDDGEDE--YAYQAVVKIGGHVFKGFLYDQGVEAGDGF-----------PNV 455
           F+CVRV+++++ ED+  YAYQ  V IGGH+FKG LYDQG E  D              NV
Sbjct: 245 FRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATTTNV 304

Query: 456 SELHLSDGGGGSRNNRNGSSSAPFVDPSDVYNA 463
            E       G   NN NG      +DPS +Y A
Sbjct: 305 EETATKTVTG---NNNNGL----MLDPSSLYPA 329

[Close]

BLAST of Cp4.1LG16g08610 vs. NCBI nr
Match: gi|659097495|ref|XP_008449658.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 596.7 bits (1537), Expect = 3.7e-167
Identity = 316/375 (84.27%), Postives = 331/375 (88.27%), Query Frame = 1


Query: 112 LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 171
           +WSAAA  QRSLNYGLGSEMGMVGLRDVYVVAPA+SFN NPH HD NL+SD HSLA SN 
Sbjct: 1   MWSAAA--QRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNP 60

Query: 172 ATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPS 231
           ATALGVGVGVGVIPLLTAGPC+GVEE+NL G+RS +RGGGIQ     QQSTQHYLKKTPS
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQF----QQSTQHYLKKTPS 120

Query: 232 SSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRS 291
            SLDH     SGTNN+LIGGGIG  GGLASSSSATTTCQDCGNQAKKDCS  RCRTCCRS
Sbjct: 121 GSLDH----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRS 180

Query: 292 RGFDCATHVKSTWVPAARRRERQLMAITGTAA-DGSSGSASGTKKPRLIASQTTSHTSTS 351
           RGFDCATHVKSTWVPAARRRERQLMA+T TAA DGSS S SG KKPRLI SQTTSHTSTS
Sbjct: 181 RGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTS 240

Query: 352 NTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHV 411
           NTTPP S+DTSSSHQD G KE LPGQIRA AVFKCVRVTAVDDG+DEYAY A+VKIGGHV
Sbjct: 241 NTTPPRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHV 300

Query: 412 FKGFLYDQGVEAGDGFPNVSELHLSD--GGGGSRNNRNGSSSAPFVDPSDVYNAAASGNG 471
           FKGFLYDQGVEAGDGFPNVSELHL D  GGGG+ NNRNGSSS+P VDPSDVYN AASG+G
Sbjct: 301 FKGFLYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSG 360

Query: 472 GAPGFLGGSNYGNQI 484
           G PGFLGGSNYGNQI
Sbjct: 361 GVPGFLGGSNYGNQI 365

[Close]

BLAST of Cp4.1LG16g08610 vs. NCBI nr
Match: gi|659097499|ref|XP_008449660.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 590.5 bits (1521), Expect = 2.7e-165
Identity = 313/372 (84.14%), Postives = 328/372 (88.17%), Query Frame = 1


Query: 112 LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 171
           +WSAAA  QRSLNYGLGSEMGMVGLRDVYVVAPA+SFN NPH HD NL+SD HSLA SN 
Sbjct: 1   MWSAAA--QRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNP 60

Query: 172 ATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPS 231
           ATALGVGVGVGVIPLLTAGPC+GVEE+NL G+RS +RGGGIQ     QQSTQHYLKKTPS
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQF----QQSTQHYLKKTPS 120

Query: 232 SSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRS 291
            SLDH     SGTNN+LIGGGIG  GGLASSSSATTTCQDCGNQAKKDCS  RCRTCCRS
Sbjct: 121 GSLDH----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRS 180

Query: 292 RGFDCATHVKSTWVPAARRRERQLMAITGTAA-DGSSGSASGTKKPRLIASQTTSHTSTS 351
           RGFDCATHVKSTWVPAARRRERQLMA+T TAA DGSS S SG KKPRLI SQTTSHTSTS
Sbjct: 181 RGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTS 240

Query: 352 NTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHV 411
           NTTPP S+DTSSSHQD G KE LPGQIRA AVFKCVRVTAVDDG+DEYAY A+VKIGGHV
Sbjct: 241 NTTPPRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHV 300

Query: 412 FKGFLYDQGVEAGDGFPNVSELHLSD--GGGGSRNNRNGSSSAPFVDPSDVYNAAASGNG 471
           FKGFLYDQGVEAGDGFPNVSELHL D  GGGG+ NNRNGSSS+P VDPSDVYN AASG+G
Sbjct: 301 FKGFLYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSG 360

Query: 472 GAPGFLGGSNYG 481
           G PGFLGGSNYG
Sbjct: 361 GVPGFLGGSNYG 362

[Close]

BLAST of Cp4.1LG16g08610 vs. NCBI nr
Match: gi|659097497|ref|XP_008449659.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 589.0 bits (1517), Expect = 7.8e-165
Identity = 312/371 (84.10%), Postives = 327/371 (88.14%), Query Frame = 1


Query: 112 LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 171
           +WSAAA  QRSLNYGLGSEMGMVGLRDVYVVAPA+SFN NPH HD NL+SD HSLA SN 
Sbjct: 1   MWSAAA--QRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNP 60

Query: 172 ATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPS 231
           ATALGVGVGVGVIPLLTAGPC+GVEE+NL G+RS +RGGGIQ     QQSTQHYLKKTPS
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQF----QQSTQHYLKKTPS 120

Query: 232 SSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRS 291
            SLDH     SGTNN+LIGGGIG  GGLASSSSATTTCQDCGNQAKKDCS  RCRTCCRS
Sbjct: 121 GSLDH----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRS 180

Query: 292 RGFDCATHVKSTWVPAARRRERQLMAITGTAA-DGSSGSASGTKKPRLIASQTTSHTSTS 351
           RGFDCATHVKSTWVPAARRRERQLMA+T TAA DGSS S SG KKPRLI SQTTSHTSTS
Sbjct: 181 RGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTS 240

Query: 352 NTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHV 411
           NTTPP S+DTSSSHQD G KE LPGQIRA AVFKCVRVTAVDDG+DEYAY A+VKIGGHV
Sbjct: 241 NTTPPRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHV 300

Query: 412 FKGFLYDQGVEAGDGFPNVSELHLSD--GGGGSRNNRNGSSSAPFVDPSDVYNAAASGNG 471
           FKGFLYDQGVEAGDGFPNVSELHL D  GGGG+ NNRNGSSS+P VDPSDVYN AASG+G
Sbjct: 301 FKGFLYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSG 360

Query: 472 GAPGFLGGSNY 480
           G PGFLGGSNY
Sbjct: 361 GVPGFLGGSNY 361

[Close]

BLAST of Cp4.1LG16g08610 vs. NCBI nr
Match: gi|778716930|ref|XP_011657617.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus])

HSP 1 Score: 588.2 bits (1515), Expect = 1.3e-164
Identity = 314/375 (83.73%), Postives = 328/375 (87.47%), Query Frame = 1


Query: 112 LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 171
           +WSAAA  QRSLNYG GSEMGMVGLRDVYVVAPA+SFN NP  HD NL+SD HSLA SN 
Sbjct: 1   MWSAAA--QRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNP 60

Query: 172 ATALGVGVGVGVIPLLTAGPCLGVEEDNLLGSRSGSRGGGIQLWQQNQQSTQHYLKKTPS 231
           ATALGVGVGVGVIPLLTAGPCLGVEE+N  G+RS +RGGGIQ     QQSTQHYLKKTPS
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQF----QQSTQHYLKKTPS 120

Query: 232 SSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRS 291
            SLDH     SGTNN+LIGGGIG  GGLASSSSATTTCQDCGNQAKKDCS  RCRTCCRS
Sbjct: 121 GSLDH----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRS 180

Query: 292 RGFDCATHVKSTWVPAARRRERQLMAITGTAA-DGSSGSASGTKKPRLIASQTTSHTSTS 351
           RGFDCATHVKSTWVPAARRRERQLMA+T TAA DGSS S SG KKPRLI SQTTSHTSTS
Sbjct: 181 RGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTS 240

Query: 352 NTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHV 411
           NTTPP S+DTSSSHQDAG KE LPGQIRA AVFKCVRVTAVDDG+DEYAY A+VKIGGHV
Sbjct: 241 NTTPPRSLDTSSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHV 300

Query: 412 FKGFLYDQGVEAGDGFPNVSELHLSD--GGGGSRNNRNGSSSAPFVDPSDVYNAAASGNG 471
           FKGFLYDQGVEAGDGFPNVSELHL D  GGGG+ NNRNGSSS+P VDPSDVYN A SG+G
Sbjct: 301 FKGFLYDQGVEAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSG 360

Query: 472 GAPGFLGGSNYGNQI 484
           G PGFLGGSNYGNQI
Sbjct: 361 GVPGFLGGSNYGNQI 364

[Close]

BLAST of Cp4.1LG16g08610 vs. NCBI nr
Match: gi|703132094|ref|XP_010105043.1| (hypothetical protein L484_001078 [Morus notabilis])

HSP 1 Score: 503.8 bits (1296), Expect = 3.3e-139
Identity = 307/472 (65.04%), Postives = 337/472 (71.40%), Query Frame = 1


Query: 58  SSVVATTRRLPSDSGAFADWAAPSSSA--------------GRAPPDDLSLGFNAAPAVA 117
           SSVVATTRRLPSDSGAFADW A SSSA              G + PD+LSLGFNA P   
Sbjct: 23  SSVVATTRRLPSDSGAFADWVASSSSAAAAAAAAAAAAAGRGASVPDELSLGFNAGPTGG 82

Query: 118 PPAGPPAPLWSAA--AAAQRSLNYGLGSEMGMVGLRDVYVVAPAASF-NPNPHHH----- 177
              G PA   S+A  A + R +NYGL  EMGMVGLRDV+VVAPA+SF +PN HHH     
Sbjct: 83  --GGGPASSSSSALWAGSSRPINYGLPPEMGMVGLRDVFVVAPASSFHHPNHHHHHHHHA 142

Query: 178 DPNLISDDHSLAASNSATALGVGVGVGVIPLLTAGPCLGVEED---NLLGSRSGSR---- 237
           DP LI+D HSL  SN ATALGVGVGVGVIPLLTA PCLG  +D   N LG  + SR    
Sbjct: 143 DPYLIADHHSLNGSNPATALGVGVGVGVIPLLTATPCLGPVDDDSANALGGSTASRGRSG 202

Query: 238 -----------GGGIQLWQQNQQSTQHYLKKTPSSSLDHHLHNASGTNNDLI--GGGIGV 297
                      GGGIQLW QNQQ+ QH+ KK   + LD       G N +L+  GGG GV
Sbjct: 203 GGGGSGVAGGVGGGIQLW-QNQQNQQHFFKKPGINILD------QGINPNLVQSGGGGGV 262

Query: 298 FGGLASSSSATTTCQDCGNQAKKDCSRGRCRTCCRSRGFDCATHVKSTWVPAARRRERQL 357
            G   S SS+T TCQDCGNQAKKDC+  RCRTCC+SRGF+CATHVKSTWVPAARRRERQL
Sbjct: 263 IG---SGSSSTATCQDCGNQAKKDCTHRRCRTCCKSRGFECATHVKSTWVPAARRRERQL 322

Query: 358 MAITGTA-ADGSSGSASGTKKPRLIASQ--TTSHTSTSNTTPPGSIDTSSSHQDAGFKEE 417
           M + G A   GSSGS SG KKPRL ASQ  TTSHTSTSNTTPP S DTSSSHQD G+K+ 
Sbjct: 323 MNVAGAAVGPGSSGSTSGAKKPRLFASQTTTTSHTSTSNTTPPRSFDTSSSHQDVGYKDS 382

Query: 418 LPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVEAGDGFPNVSEL 477
           LPGQ+RAPAVFKCVRVTAV+DGEDEYAYQAVVKIGGHVFKGFLYDQGVE  +GFPN+SEL
Sbjct: 383 LPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVEPKEGFPNISEL 442

Query: 478 HLSDGGGGSRNNRNG-SSSAPFVDPSDVYNAAASGNGGAPGFLGGSNYGNQI 484
           HL  GGGG    RNG SSS+P +DPSDVY A+  G     G LGGS YGNQI
Sbjct: 443 HLGGGGGG----RNGASSSSPLLDPSDVYAASTGG-----GLLGGSGYGNQI 473

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g08610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRP1_ARATH	3.4e-80	54.37	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1	[more]
SRS2_ARATH	3.3e-38	43.24	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1	[more]
SHI_ARATH	2.9e-34	39.78	Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1	[more]
SRS1_ARATH	6.4e-34	36.92	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2	[more]
SRS5_ARATH	8.6e-31	37.36	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g08610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF01_CUCSA	9.2e-165	83.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G432270 PE=4 SV=1	[more]
W9RQF7_9ROSA	2.3e-139	65.04	Uncharacterized protein OS=Morus notabilis GN=L484_001078 PE=4 SV=1	[more]
A0A061GZE9_THECC	1.1e-130	65.31	Lateral root primordium protein-related isoform 3 (Fragment) OS=Theobroma cacao ...	[more]
A0A061GUQ3_THECC	2.8e-129	65.06	Lateral root primordium protein-related isoform 1 OS=Theobroma cacao GN=TCM_0409...	[more]
A5BRG1_VITVI	2.0e-119	65.87	Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_006086 P...	[more]

BLAST of Cp4.1LG16g08610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12330.4	7.9e-91	52.39	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	1.8e-39	43.24	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	1.6e-35	39.78	Lateral root primordium (LRP) protein-related	[more]
AT3G51060.1	3.6e-35	36.92	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	4.9e-32	37.36	SHI-related sequence 5	[more]

BLAST of Cp4.1LG16g08610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097495\|ref\|XP_008449658.1\|	3.7e-167	84.27	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo]	[more]
gi\|659097499\|ref\|XP_008449660.1\|	2.7e-165	84.14	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo]	[more]
gi\|659097497\|ref\|XP_008449659.1\|	7.8e-165	84.10	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo]	[more]
gi\|778716930\|ref\|XP_011657617.1\|	1.3e-164	83.73	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]	[more]
gi\|703132094\|ref\|XP_010105043.1\|	3.3e-139	65.04	hypothetical protein L484_001078 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007818	SHI
IPR006511	SHI_C
IPR006510	Znf_LRP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g08610.1	Cp4.1LG16g08610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAMs	TIGR01623	TIGR01623	coord: 268..310 score: 4.0
IPR006511	Lateral Root Primordium type 1, C-terminal	TIGRFAMs	TIGR01624	TIGR01624	coord: 373..420 score: 5.1
IPR007818	Protein of unknown function DUF702	PFAM	PF05142	DUF702	coord: 266..421 score: 1.2
None	No IPR available	PANTHER	PTHR31604	FAMILY NOT NAMED	coord: 133..484 score: 2.5E
None	No IPR available	PANTHER	PTHR31604:SF2	PROTEIN SHI RELATED SEQUENCE 6	coord: 133..484 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g08610	Cucsa.087040	Cucumber (Gy14) v1	cgycpeB0160
Cp4.1LG16g08610	CmaCh20G001080	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g08610	CmaCh02G012730	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g08610	CmoCh20G001160	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g08610	CmoCh02G013150	Cucurbita moschata (Rifu)	cmocpeB576
Cp4.1LG16g08610	CmoCh11G008930	Cucurbita moschata (Rifu)	cmocpeB102
Cp4.1LG16g08610	Cla008574	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g08610	Csa6G432270	Cucumber (Chinese Long) v2	cpecuB281
Cp4.1LG16g08610	MELO3C014564	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g08610	ClCG03G012640	Watermelon (Charleston Gray)	cpewcgB276
Cp4.1LG16g08610	ClCG02G022900	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g08610	CSPI01G30960	Wild cucumber (PI 183967)	cpecpiB268
Cp4.1LG16g08610	CSPI06G23890	Wild cucumber (PI 183967)	cpecpiB283
Cp4.1LG16g08610	Lsi10G010870	Bottle gourd (USVL1VR-Ls)	cpelsiB227
Cp4.1LG16g08610	Lsi06G005760	Bottle gourd (USVL1VR-Ls)	cpelsiB246
Cp4.1LG16g08610	MELO3C014564.2	Melon (DHL92) v3.6.1	cpemedB324
Cp4.1LG16g08610	CsaV3_6G039030	Cucumber (Chinese Long) v3	cpecucB0348
Cp4.1LG16g08610	CsaV3_1G043360	Cucumber (Chinese Long) v3	cpecucB0333
Cp4.1LG16g08610	Bhi02G001250	Wax gourd	cpewgoB0375
Cp4.1LG16g08610	Bhi10G000200	Wax gourd	cpewgoB0354
Cp4.1LG16g08610	CsGy6G023240	Cucumber (Gy14) v2	cgybcpeB755
Cp4.1LG16g08610	CsGy1G030220	Cucumber (Gy14) v2	cgybcpeB037
Cp4.1LG16g08610	Carg06880	Silver-seed gourd	carcpeB0733
Cp4.1LG16g08610	Carg02690	Silver-seed gourd	carcpeB1273

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG16g08610	Cp4.1LG04g12290	Cucurbita pepo (Zucchini)	cpecpeB305
Cp4.1LG16g08610	Cp4.1LG05g04760	Cucurbita pepo (Zucchini)	cpecpeB310

The following block(s) are covering this gene:

None