Cp4.1LG05g04760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g04760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLateral root primordium protein-related, putative
LocationCp4.1LG05 : 2788710 .. 2791109 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAGTCCGACAGGAGATAAATAATTTCTAGGGTTTCCGACAAACAATACAATCCAATCAATCGACAAAGCAGAAGGATTTGGGAGAGAGGACTTTAGCCGCTCTACTCAGACTTCCCTTCCTTTTTCTCTCTGCTACATTATGAACGAGGCGCGTGAAACCCACGCGCCCCTCTCTCTCTCTCTAAACTTGTGGGTGTTCTTATTGGAGAGAGATTGAAAGAAAAAAACAAACCCACCACCACCACCACCACCTCCACCTCCACCTCCGTTTCACTTTCTCCACCATAAATATAAACAGAGAAGAGAGAGAAAATGGTGGTTTTAGTGAGAGAAAATAAAGGAGAGAGAGTTTCCAATTCATTGTCTTCCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTAGAAGTTAAACCTTTTTCTTTGTTATACCAAAAAGCCAAAGTTTGTGGCAGTACTCAGTGATCGACAGCAGCTGAAGCTGAGCTGAATCAGCTGCAGAAACAGCAGCAGAACCAGTAGCAGAAGAAACAGAAGCAGAAGCAGAAGCATTTCTGGTGCTCATACGAAAGAGAAGAAGATTATATAAGAGCCCCGAACAACAAATCCAAAAATCAAAACCCATCTCTCTTAATTTTGTTTTTTTATTTTCTCCCCTCTTCTTCTTGTTCTTGTTCTTGTTCTTCCTGTTCTTCCTTTTTTTCTGTCATCCAAATCTCTCTGCTACAAATTCAGACAGACCCCACTTCCCATATAACGCCTAAATAGATTGAATTCCCCGATCCCAATTTTTTTTTTTTAATTTATTAATTTTAATTTTAATTTCTCCCTCTGATTTTCCGTATTTAAATTGTGGCTACTACAAGGAGGTTACCTTCTGATTCCGGTGCTTTTGCAGACTGGGCGGCTTCCTCTTCCTCCGCCGCTCGTTCCGCCCCTGATGATCTCTCTCTCGGCTTCAATGCCGGCCCTACTCCTCCCCCTCCTGTTCTACCCTCCGCCTCCATGTGGTCCGCCGCCGCTGCTTCTCAAAGGTCTCTTAATTACGGCCTTGGATCAGAAATGAGCATGGTTGGCCTCCGAGATGTGTTTGTCGTTGCACCGGCTTCCTCTTTCAACCCTAATCCTCACCACCACGACAATAACCTCCTCTCAGATCCTCATTCCCTCGCTGTCTCTAACCCCGCCACCGCTCTCGGCGTCGGCGTTATTCCGCTGCTCACCGCCGGGCCCTGCCTCGGCGTTGAGGAGGATAATTTATTGAGTAATCGGAGTAGTAACAGAGGCGGAGGGATTCAGTTATGGCAACAGAATCATTATTTGAAGAAAATGCCATCGTCTCTGGATCATCACCTCCATAATCCCTCCGCCGCTAACAATGGACTTCTCGACGACGGAATCGGTATCACCGGCGGTTTAGCTTCGTCGTCGTCGGCGACGACCACGTGTCAGGACTGTGGTAACCAAGCGAAGAAGGATTGTAGTCATAGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCACTACTCACGTGAAGAGCACGTGGGTTCCTGCAGCGCGACGGCGAGAGCGGCAACTAATGGGGGTAACTGCTAACGCCGCTGCTGGTTCATCCGCCTCCACCTCTGGCGCGAAGAAACCGCGACTCATCGCTTCGCAAACCACTTCTCGAACTTCCACTTCCAATACGACGCCGCCGCGTAGCCTCGATACGAGCTCCAGCCATCAAGGTGAATTAAATCTAAATCAAACCCTAAATTACGTAATTACATCAATTTTCATTTGAAACTAATTTCATTTTGTTCAGATGCTGGTTTTCCAGAGGCATTACCAGGACAAGTACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTCACGGCGGTGGACGACGGCGACGACGAATACGCTTATCAAGCGGTGGTTAAAATCGGCGGACATATCTTCAAAGGTTTTTTGTACGATCAAGGCGTTGAACCAGGAGATGAGTTTCCGAATGTTTCGGAATTGCATTTAGGCGACGGCGGTGGAATAACCAGAAACAATCGGAATGGCATTTCTTCTTCTCCGCTTGTTGATCCATCGGACGTCTACAATGCTGCCGCCACTGGCGGCGGCGCTCCATGTTTTCTCGGCGGTTCAAATTACGGTAATCAAATCAGCTGATAAATTTCATACTGATTCTCTTCACAATTTCAAAAAAAGAACCCGCAATTATGTAATTTCATCTGATTTATGATATCATATTTCTACTAACCAATCCGTTCTTAATATCCGTTAAATTCATGATCAATCTACAGTTTTCTTCCATTAAGAACAGTTCATAATCATAGGAATTTGAGCCATTTCATTTCGTGTG

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAGTCCGACAGGAGATAAATAATTTCTAGGGTTTCCGACAAACAATACAATCCAATCAATCGACAAAGCAGAAGGATTTGGGAGAGAGGACTTTAGCCGCTCTACTCAGACTTCCCTTCCTTTTTCTCTCTGCTACATTATGAACGAGGCGCGTGAAACCCACGCGCCCCTCTCTCTCTCTCTAAACTTGTGGGTGTTCTTATTGGAGAGAGATTGAAAGAAAAAAACAAACCCACCACCACCACCACCACCTCCACCTCCACCTCCGTTTCACTTTCTCCACCATAAATATAAACAGAGAAGAGAGAGAAAATGGTGGTTTTAGTGAGAGAAAATAAAGGAGAGAGAGTTTCCAATTCATTGTCTTCCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTAGAAGTTAAACCTTTTTCTTTGTTATACCAAAAAGCCAAAGTTTGTGGCAGTACTCAGTGATCGACAGCAGCTGAAGCTGAGCTGAATCAGCTGCAGAAACAGCAGCAGAACCAGTAGCAGAAGAAACAGAAGCAGAAGCAGAAGCATTTCTGACTGGGCGGCTTCCTCTTCCTCCGCCGCTCGTTCCGCCCCTGATGATCTCTCTCTCGGCTTCAATGCCGGCCCTACTCCTCCCCCTCCTGTTCTACCCTCCGCCTCCATGTGGTCCGCCGCCGCTGCTTCTCAAAGGTCTCTTAATTACGGCCTTGGATCAGAAATGAGCATGGTTGGCCTCCGAGATGTGTTTGTCGTTGCACCGGCTTCCTCTTTCAACCCTAATCCTCACCACCACGACAATAACCTCCTCTCAGATCCTCATTCCCTCGCTGTCTCTAACCCCGCCACCGCTCTCGGCGTCGGCGTTATTCCGCTGCTCACCGCCGGGCCCTGCCTCGGCGTTGAGGAGGATAATTTATTGAGTAATCGGAGTAGTAACAGAGGCGGAGGGATTCAGTTATGGCAACAGAATCATTATTTGAAGAAAATGCCATCGTCTCTGGATCATCACCTCCATAATCCCTCCGCCGCTAACAATGGACTTCTCGACGACGGAATCGGTATCACCGGCGGTTTAGCTTCGTCGTCGTCGGCGACGACCACGTGTCAGGACTGTGGTAACCAAGCGAAGAAGGATTGTAGTCATAGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCACTACTCACGTGAAGAGCACGTGGGTTCCTGCAGCGCGACGGCGAGAGCGGCAACTAATGGGGGTAACTGCTAACGCCGCTGCTGGTTCATCCGCCTCCACCTCTGGCGCGAAGAAACCGCGACTCATCGCTTCGCAAACCACTTCTCGAACTTCCACTTCCAATACGACGCCGCCGCGTAGCCTCGATACGAGCTCCAGCCATCAAGATGCTGGTTTTCCAGAGGCATTACCAGGACAAGTACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTCACGGCGGTGGACGACGGCGACGACGAATACGCTTATCAAGCGGTGGTTAAAATCGGCGGACATATCTTCAAAGGTTTTTTGTACGATCAAGGCGTTGAACCAGGAGATGAGTTTCCGAATGTTTCGGAATTGCATTTAGGCGACGGCGGTGGAATAACCAGAAACAATCGGAATGGCATTTCTTCTTCTCCGCTTGTTGATCCATCGGACGTCTACAATGCTGCCGCCACTGGCGGCGGCGCTCCATGTTTTCTCGGCGGTTCAAATTACGGTAATCAAATCAGCTGATAAATTTCATACTGATTCTCTTCACAATTTCAAAAAAAGAACCCGCAATTATGTAATTTCATCTGATTTATGATATCATATTTCTACTAACCAATCCGTTCTTAATATCCGTTAAATTCATGATCAATCTACAGTTTTCTTCCATTAAGAACAGTTCATAATCATAGGAATTTGAGCCATTTCATTTCGTGTG

Coding sequence (CDS)

ATGTGGTCCGCCGCCGCTGCTTCTCAAAGGTCTCTTAATTACGGCCTTGGATCAGAAATGAGCATGGTTGGCCTCCGAGATGTGTTTGTCGTTGCACCGGCTTCCTCTTTCAACCCTAATCCTCACCACCACGACAATAACCTCCTCTCAGATCCTCATTCCCTCGCTGTCTCTAACCCCGCCACCGCTCTCGGCGTCGGCGTTATTCCGCTGCTCACCGCCGGGCCCTGCCTCGGCGTTGAGGAGGATAATTTATTGAGTAATCGGAGTAGTAACAGAGGCGGAGGGATTCAGTTATGGCAACAGAATCATTATTTGAAGAAAATGCCATCGTCTCTGGATCATCACCTCCATAATCCCTCCGCCGCTAACAATGGACTTCTCGACGACGGAATCGGTATCACCGGCGGTTTAGCTTCGTCGTCGTCGGCGACGACCACGTGTCAGGACTGTGGTAACCAAGCGAAGAAGGATTGTAGTCATAGACGCTGCAGAACTTGTTGTCGAAGCCGAGGGTTCGATTGCACTACTCACGTGAAGAGCACGTGGGTTCCTGCAGCGCGACGGCGAGAGCGGCAACTAATGGGGGTAACTGCTAACGCCGCTGCTGGTTCATCCGCCTCCACCTCTGGCGCGAAGAAACCGCGACTCATCGCTTCGCAAACCACTTCTCGAACTTCCACTTCCAATACGACGCCGCCGCGTAGCCTCGATACGAGCTCCAGCCATCAAGATGCTGGTTTTCCAGAGGCATTACCAGGACAAGTACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTCACGGCGGTGGACGACGGCGACGACGAATACGCTTATCAAGCGGTGGTTAAAATCGGCGGACATATCTTCAAAGGTTTTTTGTACGATCAAGGCGTTGAACCAGGAGATGAGTTTCCGAATGTTTCGGAATTGCATTTAGGCGACGGCGGTGGAATAACCAGAAACAATCGGAATGGCATTTCTTCTTCTCCGCTTGTTGATCCATCGGACGTCTACAATGCTGCCGCCACTGGCGGCGGCGCTCCATGTTTTCTCGGCGGTTCAAATTACGGTAATCAAATCAGCTGA

Protein sequence

MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNPATALGVGVIPLLTAGPCLGVEEDNLLSNRSSNRGGGIQLWQQNHYLKKMPSSLDHHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQLMGVTANAAAGSSASTSGAKKPRLIASQTTSRTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNNRNGISSSPLVDPSDVYNAAATGGGAPCFLGGSNYGNQIS
Homology
[Close]
BLAST of Cp4.1LG05g04760 vs. Swiss-Prot
Match: LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.8e-81
Identity = 188/342 (54.97%), Postives = 226/342 (66.08%), Query Frame = 1 

Query: 20  MSMVGLRDVFVVAPASSFNPNPHHHDNNLLS-DPHSLAVSNPATALGVGVIPLLTAG-PC 79
           M MVGLRDVF+VAPA       HH +  ++S   H  + +  A ALGVGVIPLLTAG P 
Sbjct: 1   MGMVGLRDVFLVAPAY------HHQNAGVISGSDHMNSNAAAAAALGVGVIPLLTAGTPQ 60

Query: 80  LGVEEDNLLSNRSSNRGGGIQLWQQN---HYLKKMPSSLDHHLHNPSAANNGLLDDGIGI 139
             VE+ ++      N  G  + WQ N   H  + +     +     +++NN         
Sbjct: 61  QNVEDSDI------NFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNS-------- 120

Query: 140 TGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQL 199
             G  S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AARRRERQ+
Sbjct: 121 --GSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQV 180

Query: 200 MGVTANAAAGSSASTS-GAKKPRLIASQ------TTSRTSTSNTTPPRSLDTSSSHQDAG 259
           M   AN  AGSS STS G KKPR++ SQ       TS TSTSNT PP+S +TSSS QD G
Sbjct: 181 MPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNT-PPQSFETSSSRQDGG 240

Query: 260 FP-EALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQGVEPGDEFP 319
              EA PGQVRA AVFKCVRVTAV+DGDDEYAYQAVVKIGGH+FKGFLYDQG+EP + FP
Sbjct: 241 GSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFP 300

Query: 320 NVSELHLGDGGGITRNNRNGIS-SSPLVDPSDVYNAAATGGG 348
           ++S+LHLG     + NN NG+S S+P++DP +V      G G
Sbjct: 301 SMSDLHLGG----SANNHNGVSASAPILDPPNVVYGGGGGSG 315

[Close]
BLAST of Cp4.1LG05g04760 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.1e-36
Identity = 100/241 (41.49%), Postives = 133/241 (55.19%), Query Frame = 1 

Query: 92  NRGGGIQLWQQNHYLKKMPSSLDHHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDC 151
           N     Q+WQ    +      + HH H    + +      I ++    SS S T +C+DC
Sbjct: 42  NPSSSQQVWQ----IPPEQMLMHHHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDC 101

Query: 152 GNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRER--QLMGVTANAAAGS---S 211
           GNQAKKDC+H RCRTCC+SRGFDC+THV+STW+P ARRRER  QL   T+    GS    
Sbjct: 102 GNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGG 161

Query: 212 ASTSGAKKPRLIASQTTSRTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVR 271
           A   G+  P+     T   TS+S+  P  S        +A F    PG+V + A+F+CV+
Sbjct: 162 AGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMG--EASF----PGEVSSDALFRCVK 221

Query: 272 VTAVDD-GDDEYAYQAVVKIGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNNRN 327
           ++ VDD GD +YAYQ  V IGGH+FKG LYDQG       P  S +  G GG   +++  
Sbjct: 222 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQG-------PESSYMSGGSGGSDHQSSSA 265

[Close]
BLAST of Cp4.1LG05g04760 vs. Swiss-Prot
Match: SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.6e-35
Identity = 101/242 (41.74%), Postives = 125/242 (51.65%), Query Frame = 1 

Query: 135 TGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQL 194
           TGG   +      CQDCGNQAKKDC H RCRTCC+SRGFDC THVKSTWV AA+RRERQ 
Sbjct: 106 TGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQA 165

Query: 195 MGVTANAAAGSSASTSGAKKPRLIASQTTSRTST---SNTTPPRSLDTSSSHQDAGFPEA 254
                 A     A++ G         +     S    S     R ++ SSS  +      
Sbjct: 166 QLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSH--- 225

Query: 255 LPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQGVEP---------G 314
           LP ++ +PAVF+C+RV+++DD D+EYAYQ  V IGGH+FKG LYDQG             
Sbjct: 226 LPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLN 285

Query: 315 DEFPNVSELHLGDG-------GGITRNNRNGISSSPLVDPSDVYNAAAT------GGGAP 352
            E  +   L+L D          +T  N N  S    +DPS +Y A AT       GG P
Sbjct: 286 GETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS----IDPSSLYTAVATPFNAFVAGGTP 340

[Close]
BLAST of Cp4.1LG05g04760 vs. Swiss-Prot
Match: SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-34
Identity = 96/236 (40.68%), Postives = 126/236 (53.39%), Query Frame = 1 

Query: 136 GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQLM 195
           GG   +      CQDCGNQAKKDC H RCRTCC+SRGF C THVKSTWVPAA+RRER   
Sbjct: 113 GGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQ 172

Query: 196 GVTANAAAGSSASTSGAKKPRLIASQTTSRTSTSNTTPPRSLD-----TSSSHQDAGFPE 255
             +    + SS  T  AK+ R  +    +     +     +L       ++S+      +
Sbjct: 173 LASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQ 232

Query: 256 ALPGQVRAPAVFKCVRVTAVDDGDDE--YAYQAVVKIGGHIFKGFLYDQGVEPGDEF--- 315
            LP +V +PA+F+CVRV+++++ +D+  YAYQ  V IGGHIFKG LYDQG E  D     
Sbjct: 233 HLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLN 292

Query: 316 --------PNVSELHLGDGGGITRNNRNGISSSPLVDPSDVYNAAATG--GGAPCF 352
                    NV E        +T NN NG+    ++DPS +Y A       G P F
Sbjct: 293 LLASTATTTNVEETATKT---VTGNNNNGL----MLDPSSLYPAQLNSFIAGTPFF 341

[Close]
BLAST of Cp4.1LG05g04760 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-33
Identity = 79/165 (47.88%), Postives = 100/165 (60.61%), Query Frame = 1 

Query: 134 ITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQ 193
           I  G +   S   +CQDCGNQAKKDCSH RCRTCC+SRGF+C+THV+STWVPAA+RRERQ
Sbjct: 130 IRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQ 189

Query: 194 LMGVTANAAAGSSASTSGAKKPRLIASQTTSRTSTSNTTPPRSLDTSSSHQDAGFPEALP 253
               T           S  K+ R     T+S    +       L+  +           P
Sbjct: 190 QQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGN----------FP 249

Query: 254 GQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQG 299
            +V + AVF+CVRV++V+DG++E+AYQ  V IGGHIFKG LYD G
Sbjct: 250 AEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]
BLAST of Cp4.1LG05g04760 vs. TrEMBL
Match: A0A0A0KF01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G432270 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.0e-155
Identity = 308/372 (82.80%), Postives = 316/372 (84.95%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWSAAA  QRSLNYG GSEM MVGLRDV+VVAPASSFN NP  HD NLLSDPHSLAVSNP
Sbjct: 1   MWSAAA--QRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNP 60

Query: 61  ATALGVGV----IPLLTAGPCLGVEEDNLLSNRSSNRGGGIQLWQQN-HYLKKMPS-SLD 120
           ATALGVGV    IPLLTAGPCLGVEE+N   NRS NRGGGIQ  Q   HYLKK PS SLD
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLD 120

Query: 121 HHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180
           H     S  NN L+  GIG +GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD
Sbjct: 121 H----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180

Query: 181 CTTHVKSTWVPAARRRERQLMGVTANAAA-GSSASTSGAKKPRLIASQTTSRTSTSNTTP 240
           C THVKSTWVPAARRRERQLM VTA AAA GSSASTSGAKKPRLI SQTTS TSTSNTTP
Sbjct: 181 CATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTP 240

Query: 241 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 300
           PRSLDTSSSHQDAG  EALPGQ+RA AVFKCVRVTAVDDGDDEYAY A+VKIGGH+FKGF
Sbjct: 241 PRSLDTSSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGF 300

Query: 301 LYDQGVEPGDEFPNVSELHLGD--GGGITRNNRNGISSSPLVDPSDVYNAAATG-GGAPC 360
           LYDQGVE GD FPNVSELHLGD  GGG T NNRNG SSSPLVDPSDVYN A +G GG P 
Sbjct: 301 LYDQGVEAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPG 360

Query: 361 FLGGSNYGNQIS 363
           FLGGSNYGNQIS
Sbjct: 361 FLGGSNYGNQIS 365

[Close]
BLAST of Cp4.1LG05g04760 vs. TrEMBL
Match: W9RQF7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001078 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.7e-118
Identity = 256/393 (65.14%), Postives = 285/393 (72.52%), Query Frame = 1 

Query: 6   AASQRSLNYGLGSEMSMVGLRDVFVVAPASSFN-PNPHHH-----DNNLLSDPHSLAVSN 65
           A S R +NYGL  EM MVGLRDVFVVAPASSF+ PN HHH     D  L++D HSL  SN
Sbjct: 96  AGSSRPINYGLPPEMGMVGLRDVFVVAPASSFHHPNHHHHHHHHADPYLIADHHSLNGSN 155

Query: 66  PATALGVGV----IPLLTAGPCLGVEED---NLLSNRSSNRG---------------GGI 125
           PATALGVGV    IPLLTA PCLG  +D   N L   +++RG               GGI
Sbjct: 156 PATALGVGVGVGVIPLLTATPCLGPVDDDSANALGGSTASRGRSGGGGGSGVAGGVGGGI 215

Query: 126 QLWQ----QNHYLKKMPSSLDHHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGN 185
           QLWQ    Q H+ KK   ++     NP+   +G      G  G + S SS+T TCQDCGN
Sbjct: 216 QLWQNQQNQQHFFKKPGINILDQGINPNLVQSG------GGGGVIGSGSSSTATCQDCGN 275

Query: 186 QAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQLMGVTANAAA-GSSASTSGA 245
           QAKKDC+HRRCRTCC+SRGF+C THVKSTWVPAARRRERQLM V   A   GSS STSGA
Sbjct: 276 QAKKDCTHRRCRTCCKSRGFECATHVKSTWVPAARRRERQLMNVAGAAVGPGSSGSTSGA 335

Query: 246 KKPRLIASQTT--SRTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAV 305
           KKPRL ASQTT  S TSTSNTTPPRS DTSSSHQD G+ ++LPGQVRAPAVFKCVRVTAV
Sbjct: 336 KKPRLFASQTTTTSHTSTSNTTPPRSFDTSSSHQDVGYKDSLPGQVRAPAVFKCVRVTAV 395

Query: 306 DDGDDEYAYQAVVKIGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNNRNGI-SS 363
           +DG+DEYAYQAVVKIGGH+FKGFLYDQGVEP + FPN+SELHLG GGG     RNG  SS
Sbjct: 396 EDGEDEYAYQAVVKIGGHVFKGFLYDQGVEPKEGFPNISELHLGGGGG----GRNGASSS 455

[Close]
BLAST of Cp4.1LG05g04760 vs. TrEMBL
Match: A0A061GZE9_THECC (Lateral root primordium protein-related isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_040941 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 6.3e-118
Identity = 251/373 (67.29%), Postives = 279/373 (74.80%), Query Frame = 1 

Query: 8   SQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDP----HSLAVSNPATA 67
           S R +NYGL  EM MVGLRDVFVVAPASSFN + HHH ++   DP      +   N ATA
Sbjct: 66  SARQINYGLSHEMGMVGLRDVFVVAPASSFNHHHHHHHHHT-QDPIMANDQINGQNAATA 125

Query: 68  LGVGVIPLLTAGPCLG---VEEDNLLSNRSSNRGGGIQLWQQ----NHYLKKMPSSLDHH 127
           LGVGVIPLLTA PCL    VE+ +LLSN   N+  G+QLWQ     +HYLKK PSS+  +
Sbjct: 126 LGVGVIPLLTATPCLASQNVEDSDLLSNNGRNKLSGMQLWQNQNSSSHYLKK-PSSVPDN 185

Query: 128 LHNPSAANNGLLDDGIGITGGLASS-SSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDC 187
            +N S+ N      G G+ GG   S SS+ TTCQDCGNQAKKDC+HRRCRTCC+SRGFDC
Sbjct: 186 -NNSSSMNLIQSSGGGGMGGGSGGSGSSSGTTCQDCGNQAKKDCTHRRCRTCCKSRGFDC 245

Query: 188 TTHVKSTWVPAARRRERQLMGVTANAAAGSSASTSGAKKPRLIASQTT--SRTSTSNTTP 247
            THVKSTWV AARRRERQLM   A A AGSS STSGAKKPRLI SQTT  S TSTSNTTP
Sbjct: 246 PTHVKSTWVSAARRRERQLMVAAATAGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTP 305

Query: 248 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 307
           PRS DTSSSHQDAGF E+LPGQVRAPAVFKCVRVTAV+DG+DEYAYQAVVKIGGH+FKGF
Sbjct: 306 PRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGF 365

Query: 308 LYDQGVEPGDEFPNVSELHLGDGGGITR----NNRNGISSSPLVDPSDVYNAAATGGGAP 363
           LYDQGVE  D FPN+SELHLG GGG           G SSSP++DPS+VY  AATGGG  
Sbjct: 366 LYDQGVEGRDGFPNISELHLGGGGGGGNGGGSGRHGGSSSSPVLDPSEVY--AATGGG-- 425

[Close]
BLAST of Cp4.1LG05g04760 vs. TrEMBL
Match: A0A061GUQ3_THECC (Lateral root primordium protein-related isoform 1 OS=Theobroma cacao GN=TCM_040941 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 6.3e-118
Identity = 251/373 (67.29%), Postives = 279/373 (74.80%), Query Frame = 1 

Query: 8   SQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDP----HSLAVSNPATA 67
           S R +NYGL  EM MVGLRDVFVVAPASSFN + HHH ++   DP      +   N ATA
Sbjct: 69  SARQINYGLSHEMGMVGLRDVFVVAPASSFNHHHHHHHHHT-QDPIMANDQINGQNAATA 128

Query: 68  LGVGVIPLLTAGPCLG---VEEDNLLSNRSSNRGGGIQLWQQ----NHYLKKMPSSLDHH 127
           LGVGVIPLLTA PCL    VE+ +LLSN   N+  G+QLWQ     +HYLKK PSS+  +
Sbjct: 129 LGVGVIPLLTATPCLASQNVEDSDLLSNNGRNKLSGMQLWQNQNSSSHYLKK-PSSVPDN 188

Query: 128 LHNPSAANNGLLDDGIGITGGLASS-SSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDC 187
            +N S+ N      G G+ GG   S SS+ TTCQDCGNQAKKDC+HRRCRTCC+SRGFDC
Sbjct: 189 -NNSSSMNLIQSSGGGGMGGGSGGSGSSSGTTCQDCGNQAKKDCTHRRCRTCCKSRGFDC 248

Query: 188 TTHVKSTWVPAARRRERQLMGVTANAAAGSSASTSGAKKPRLIASQTT--SRTSTSNTTP 247
            THVKSTWV AARRRERQLM   A A AGSS STSGAKKPRLI SQTT  S TSTSNTTP
Sbjct: 249 PTHVKSTWVSAARRRERQLMVAAATAGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTP 308

Query: 248 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 307
           PRS DTSSSHQDAGF E+LPGQVRAPAVFKCVRVTAV+DG+DEYAYQAVVKIGGH+FKGF
Sbjct: 309 PRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGF 368

Query: 308 LYDQGVEPGDEFPNVSELHLGDGGGITR----NNRNGISSSPLVDPSDVYNAAATGGGAP 363
           LYDQGVE  D FPN+SELHLG GGG           G SSSP++DPS+VY  AATGGG  
Sbjct: 369 LYDQGVEGRDGFPNISELHLGGGGGGGNGGGSGRHGGSSSSPVLDPSEVY--AATGGG-- 428

[Close]
BLAST of Cp4.1LG05g04760 vs. TrEMBL
Match: A5BRG1_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_006086 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.0e-116
Identity = 248/376 (65.96%), Postives = 281/376 (74.73%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWS+   S R +NYGL  EM MVGLRDVFVVAPASSF+ N  H  + ++SDPH++  SN 
Sbjct: 1   MWSS---SSRQINYGLPHEMGMVGLRDVFVVAPASSFHHNNQH--DPIISDPHAINGSNA 60

Query: 61  ATALGVGV----IPLLTAGPCL------GVEEDNLLSNRSSNRGGGIQLWQQN-----HY 120
           ATALGVGV    IPLLTA PCL      GV+E ++L +RS  +GGGIQ WQ       +Y
Sbjct: 61  ATALGVGVGVGVIPLLTAAPCLAPSSMGGVDEADMLGHRS--KGGGIQFWQNQQTQHANY 120

Query: 121 LKKMPSSLDHHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCR 180
           LKK P  LDH+      +++ LL  G+G  G    +++  TTCQDCGNQAKKDCSHRRCR
Sbjct: 121 LKK-PMILDHN------SSSNLLSCGVGGVGASGPTTAGGTTCQDCGNQAKKDCSHRRCR 180

Query: 181 TCCRSRGFDCTTHVKSTWVPAARRRERQLMGVTANAAAGSSASTSGAKKPRLIASQTT-- 240
           TCC+SRGFDC THVKSTWVPAARRRERQLM V+    AGSS STSGAKKPRLI SQTT  
Sbjct: 181 TCCKSRGFDCATHVKSTWVPAARRRERQLM-VSVTPGAGSSGSTSGAKKPRLITSQTTTT 240

Query: 241 SRTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVV 300
           S TSTSNTTPPRS DTSSSHQDA F EALPGQVRAPAVFKCVRVTAVDDG+DEYAYQAVV
Sbjct: 241 SHTSTSNTTPPRSFDTSSSHQDASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVV 300

Query: 301 KIGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNN--RNGISSSPLVDPSDVYNA 358
           KIGGH+FKGFLYDQG+E  D FPN+SELHLG G G       RNG +SSP++DP D Y  
Sbjct: 301 KIGGHVFKGFLYDQGLETRDGFPNISELHLGGGSGSGGGGGARNGGTSSPILDPPDXY-- 356

[Close]
BLAST of Cp4.1LG05g04760 vs. TAIR10
Match: AT5G12330.4 (AT5G12330.4 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-83
Identity = 194/356 (54.49%), Postives = 233/356 (65.45%), Query Frame = 1 

Query: 11  SLNYGLGS-----EMSMVGLRDVFVVAPASSFNPNPHHHDNNLLS-DPHSLAVSNPATAL 70
           S+ YGL S     EM MVGLRDVF+VAPA       HH +  ++S   H  + +  A AL
Sbjct: 74  SVRYGLPSSAAATEMGMVGLRDVFLVAPAY------HHQNAGVISGSDHMNSNAAAAAAL 133

Query: 71  GVGVIPLLTAG-PCLGVEEDNLLSNRSSNRGGGIQLWQQN---HYLKKMPSSLDHHLHNP 130
           GVGVIPLLTAG P   VE+ ++      N  G  + WQ N   H  + +     +     
Sbjct: 134 GVGVIPLLTAGTPQQNVEDSDI------NFLGNNRRWQNNNNNHETQYLHFKSTNQTTVG 193

Query: 131 SAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVK 190
           +++NN           G  S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVK
Sbjct: 194 TSSNNS----------GSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVK 253

Query: 191 STWVPAARRRERQLMGVTANAAAGSSASTS-GAKKPRLIASQ------TTSRTSTSNTTP 250
           STWV AARRRERQ+M   AN  AGSS STS G KKPR++ SQ       TS TSTSNT P
Sbjct: 254 STWVSAARRRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNT-P 313

Query: 251 PRSLDTSSSHQDAGFP-EALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKG 310
           P+S +TSSS QD G   EA PGQVRA AVFKCVRVTAV+DGDDEYAYQAVVKIGGH+FKG
Sbjct: 314 PQSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKG 373

Query: 311 FLYDQGVEPGDEFPNVSELHLGDGGGITRNNRNGIS-SSPLVDPSDVYNAAATGGG 348
           FLYDQG+EP + FP++S+LHLG     + NN NG+S S+P++DP +V      G G
Sbjct: 374 FLYDQGLEPKEGFPSMSDLHLGG----SANNHNGVSASAPILDPPNVVYGGGGGSG 402

[Close]
BLAST of Cp4.1LG05g04760 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37
Identity = 100/241 (41.49%), Postives = 133/241 (55.19%), Query Frame = 1 

Query: 92  NRGGGIQLWQQNHYLKKMPSSLDHHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDC 151
           N     Q+WQ    +      + HH H    + +      I ++    SS S T +C+DC
Sbjct: 42  NPSSSQQVWQ----IPPEQMLMHHHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDC 101

Query: 152 GNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRER--QLMGVTANAAAGS---S 211
           GNQAKKDC+H RCRTCC+SRGFDC+THV+STW+P ARRRER  QL   T+    GS    
Sbjct: 102 GNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGG 161

Query: 212 ASTSGAKKPRLIASQTTSRTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVR 271
           A   G+  P+     T   TS+S+  P  S        +A F    PG+V + A+F+CV+
Sbjct: 162 AGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMG--EASF----PGEVSSDALFRCVK 221

Query: 272 VTAVDD-GDDEYAYQAVVKIGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNNRN 327
           ++ VDD GD +YAYQ  V IGGH+FKG LYDQG       P  S +  G GG   +++  
Sbjct: 222 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQG-------PESSYMSGGSGGSDHQSSSA 265

[Close]
BLAST of Cp4.1LG05g04760 vs. TAIR10
Match: AT1G19790.1 (AT1G19790.1 SHI-related sequence 7)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-36
Identity = 101/242 (41.74%), Postives = 125/242 (51.65%), Query Frame = 1 

Query: 135 TGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQL 194
           TGG   +      CQDCGNQAKKDC H RCRTCC+SRGFDC THVKSTWV AA+RRERQ 
Sbjct: 106 TGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQA 165

Query: 195 MGVTANAAAGSSASTSGAKKPRLIASQTTSRTST---SNTTPPRSLDTSSSHQDAGFPEA 254
                 A     A++ G         +     S    S     R ++ SSS  +      
Sbjct: 166 QLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSH--- 225

Query: 255 LPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQGVEP---------G 314
           LP ++ +PAVF+C+RV+++DD D+EYAYQ  V IGGH+FKG LYDQG             
Sbjct: 226 LPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLN 285

Query: 315 DEFPNVSELHLGDG-------GGITRNNRNGISSSPLVDPSDVYNAAAT------GGGAP 352
            E  +   L+L D          +T  N N  S    +DPS +Y A AT       GG P
Sbjct: 286 GETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS----IDPSSLYTAVATPFNAFVAGGTP 340

[Close]
BLAST of Cp4.1LG05g04760 vs. TAIR10
Match: AT1G75520.1 (AT1G75520.1 SHI-related sequence 5)

HSP 1 Score: 148.7 bits (374), Expect = 7.1e-36
Identity = 96/236 (40.68%), Postives = 126/236 (53.39%), Query Frame = 1 

Query: 136 GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQLM 195
           GG   +      CQDCGNQAKKDC H RCRTCC+SRGF C THVKSTWVPAA+RRER   
Sbjct: 113 GGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQ 172

Query: 196 GVTANAAAGSSASTSGAKKPRLIASQTTSRTSTSNTTPPRSLD-----TSSSHQDAGFPE 255
             +    + SS  T  AK+ R  +    +     +     +L       ++S+      +
Sbjct: 173 LASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQ 232

Query: 256 ALPGQVRAPAVFKCVRVTAVDDGDDE--YAYQAVVKIGGHIFKGFLYDQGVEPGDEF--- 315
            LP +V +PA+F+CVRV+++++ +D+  YAYQ  V IGGHIFKG LYDQG E  D     
Sbjct: 233 HLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLN 292

Query: 316 --------PNVSELHLGDGGGITRNNRNGISSSPLVDPSDVYNAAATG--GGAPCF 352
                    NV E        +T NN NG+    ++DPS +Y A       G P F
Sbjct: 293 LLASTATTTNVEETATKT---VTGNNNNGL----MLDPSSLYPAQLNSFIAGTPFF 341

[Close]
BLAST of Cp4.1LG05g04760 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 79/165 (47.88%), Postives = 100/165 (60.61%), Query Frame = 1 

Query: 134 ITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCTTHVKSTWVPAARRRERQ 193
           I  G +   S   +CQDCGNQAKKDCSH RCRTCC+SRGF+C+THV+STWVPAA+RRERQ
Sbjct: 130 IRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQ 189

Query: 194 LMGVTANAAAGSSASTSGAKKPRLIASQTTSRTSTSNTTPPRSLDTSSSHQDAGFPEALP 253
               T           S  K+ R     T+S    +       L+  +           P
Sbjct: 190 QQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGN----------FP 249

Query: 254 GQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGFLYDQG 299
            +V + AVF+CVRV++V+DG++E+AYQ  V IGGHIFKG LYD G
Sbjct: 250 AEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]
BLAST of Cp4.1LG05g04760 vs. NCBI nr
Match: gi|659097495|ref|XP_008449658.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 568.2 bits (1463), Expect = 1.1e-158
Identity = 311/372 (83.60%), Postives = 320/372 (86.02%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWSAAA  QRSLNYGLGSEM MVGLRDV+VVAPASSFN NPH HD NLLSDPHSLAVSNP
Sbjct: 1   MWSAAA--QRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNP 60

Query: 61  ATALGVGV----IPLLTAGPCLGVEEDNLLSNRSSNRGGGIQLWQQN-HYLKKMPS-SLD 120
           ATALGVGV    IPLLTAGPC+GVEE+NL  NRSSNRGGGIQ  Q   HYLKK PS SLD
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLD 120

Query: 121 HHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180
           H     S  NN L+  GIG +GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD
Sbjct: 121 H----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180

Query: 181 CTTHVKSTWVPAARRRERQLMGVTANAAA-GSSASTSGAKKPRLIASQTTSRTSTSNTTP 240
           C THVKSTWVPAARRRERQLM VTA AAA GSSASTSGAKKPRLI SQTTS TSTSNTTP
Sbjct: 181 CATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTP 240

Query: 241 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 300
           PRSLDTSSSHQD G  EALPGQ+RA AVFKCVRVTAVDDGDDEYAY A+VKIGGH+FKGF
Sbjct: 241 PRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGF 300

Query: 301 LYDQGVEPGDEFPNVSELHLGD--GGGITRNNRNGISSSPLVDPSDVYNAAATG-GGAPC 360
           LYDQGVE GD FPNVSELHLGD  GGG T NNRNG SSSPLVDPSDVYN AA+G GG P 
Sbjct: 301 LYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPG 360

Query: 361 FLGGSNYGNQIS 363
           FLGGSNYGNQIS
Sbjct: 361 FLGGSNYGNQIS 366

[Close]
BLAST of Cp4.1LG05g04760 vs. NCBI nr
Match: gi|659097499|ref|XP_008449660.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 560.5 bits (1443), Expect = 2.2e-156
Identity = 307/368 (83.42%), Postives = 316/368 (85.87%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWSAAA  QRSLNYGLGSEM MVGLRDV+VVAPASSFN NPH HD NLLSDPHSLAVSNP
Sbjct: 1   MWSAAA--QRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNP 60

Query: 61  ATALGVGV----IPLLTAGPCLGVEEDNLLSNRSSNRGGGIQLWQQN-HYLKKMPS-SLD 120
           ATALGVGV    IPLLTAGPC+GVEE+NL  NRSSNRGGGIQ  Q   HYLKK PS SLD
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLD 120

Query: 121 HHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180
           H     S  NN L+  GIG +GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD
Sbjct: 121 H----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180

Query: 181 CTTHVKSTWVPAARRRERQLMGVTANAAA-GSSASTSGAKKPRLIASQTTSRTSTSNTTP 240
           C THVKSTWVPAARRRERQLM VTA AAA GSSASTSGAKKPRLI SQTTS TSTSNTTP
Sbjct: 181 CATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTP 240

Query: 241 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 300
           PRSLDTSSSHQD G  EALPGQ+RA AVFKCVRVTAVDDGDDEYAY A+VKIGGH+FKGF
Sbjct: 241 PRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGF 300

Query: 301 LYDQGVEPGDEFPNVSELHLGD--GGGITRNNRNGISSSPLVDPSDVYNAAATG-GGAPC 359
           LYDQGVE GD FPNVSELHLGD  GGG T NNRNG SSSPLVDPSDVYN AA+G GG P 
Sbjct: 301 LYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPG 360

[Close]
BLAST of Cp4.1LG05g04760 vs. NCBI nr
Match: gi|659097497|ref|XP_008449659.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 558.5 bits (1438), Expect = 8.4e-156
Identity = 306/367 (83.38%), Postives = 315/367 (85.83%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWSAAA  QRSLNYGLGSEM MVGLRDV+VVAPASSFN NPH HD NLLSDPHSLAVSNP
Sbjct: 1   MWSAAA--QRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNP 60

Query: 61  ATALGVGV----IPLLTAGPCLGVEEDNLLSNRSSNRGGGIQLWQQN-HYLKKMPS-SLD 120
           ATALGVGV    IPLLTAGPC+GVEE+NL  NRSSNRGGGIQ  Q   HYLKK PS SLD
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLD 120

Query: 121 HHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180
           H     S  NN L+  GIG +GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD
Sbjct: 121 H----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180

Query: 181 CTTHVKSTWVPAARRRERQLMGVTANAAA-GSSASTSGAKKPRLIASQTTSRTSTSNTTP 240
           C THVKSTWVPAARRRERQLM VTA AAA GSSASTSGAKKPRLI SQTTS TSTSNTTP
Sbjct: 181 CATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTP 240

Query: 241 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 300
           PRSLDTSSSHQD G  EALPGQ+RA AVFKCVRVTAVDDGDDEYAY A+VKIGGH+FKGF
Sbjct: 241 PRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGF 300

Query: 301 LYDQGVEPGDEFPNVSELHLGD--GGGITRNNRNGISSSPLVDPSDVYNAAATG-GGAPC 358
           LYDQGVE GD FPNVSELHLGD  GGG T NNRNG SSSPLVDPSDVYN AA+G GG P 
Sbjct: 301 LYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPG 360

[Close]
BLAST of Cp4.1LG05g04760 vs. NCBI nr
Match: gi|778716930|ref|XP_011657617.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus])

HSP 1 Score: 557.8 bits (1436), Expect = 1.4e-155
Identity = 308/372 (82.80%), Postives = 316/372 (84.95%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWSAAA  QRSLNYG GSEM MVGLRDV+VVAPASSFN NP  HD NLLSDPHSLAVSNP
Sbjct: 1   MWSAAA--QRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNP 60

Query: 61  ATALGVGV----IPLLTAGPCLGVEEDNLLSNRSSNRGGGIQLWQQN-HYLKKMPS-SLD 120
           ATALGVGV    IPLLTAGPCLGVEE+N   NRS NRGGGIQ  Q   HYLKK PS SLD
Sbjct: 61  ATALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLD 120

Query: 121 HHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180
           H     S  NN L+  GIG +GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD
Sbjct: 121 H----VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 180

Query: 181 CTTHVKSTWVPAARRRERQLMGVTANAAA-GSSASTSGAKKPRLIASQTTSRTSTSNTTP 240
           C THVKSTWVPAARRRERQLM VTA AAA GSSASTSGAKKPRLI SQTTS TSTSNTTP
Sbjct: 181 CATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTP 240

Query: 241 PRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVKIGGHIFKGF 300
           PRSLDTSSSHQDAG  EALPGQ+RA AVFKCVRVTAVDDGDDEYAY A+VKIGGH+FKGF
Sbjct: 241 PRSLDTSSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGF 300

Query: 301 LYDQGVEPGDEFPNVSELHLGD--GGGITRNNRNGISSSPLVDPSDVYNAAATG-GGAPC 360
           LYDQGVE GD FPNVSELHLGD  GGG T NNRNG SSSPLVDPSDVYN A +G GG P 
Sbjct: 301 LYDQGVEAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPG 360

Query: 361 FLGGSNYGNQIS 363
           FLGGSNYGNQIS
Sbjct: 361 FLGGSNYGNQIS 365

[Close]
BLAST of Cp4.1LG05g04760 vs. NCBI nr
Match: gi|731393526|ref|XP_010651514.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1, partial [Vitis vinifera])

HSP 1 Score: 434.9 bits (1117), Expect = 1.4e-118
Identity = 251/381 (65.88%), Postives = 286/381 (75.07%), Query Frame = 1 

Query: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNP 60
           MWS+   S R +NYGL  EM MVGLRDVFVVAPASSF+ N  H  + ++SDPH++  SN 
Sbjct: 62  MWSS---SSRQINYGLPHEMGMVGLRDVFVVAPASSFHHNNQH--DPIISDPHAINGSNA 121

Query: 61  ATALGVGV----IPLLTAGPCL------GVEEDNLLSNRSSNRGGGIQLWQQN-----HY 120
           ATALGVGV    IPLLTA PCL      GV+E ++L +RS  +GGGIQ WQ       +Y
Sbjct: 122 ATALGVGVGVGVIPLLTAAPCLAPSSMGGVDEADMLGHRS--KGGGIQFWQNQQTQHANY 181

Query: 121 LKKMPSSLDHHLHNPSAANNGLLDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRCR 180
           LKK P  LDH+      +++ LL  G+G  G    +++  TTCQDCGNQAKKDCSHRRCR
Sbjct: 182 LKK-PMILDHN------SSSNLLSCGVGGVGASGPTTAGGTTCQDCGNQAKKDCSHRRCR 241

Query: 181 TCCRSRGFDCTTHVKSTWVPAARRRERQLMGVTANAAAGSSASTSGAKKPRLIASQTT-- 240
           TCC+SRGFDC THVKSTWVPAARRRERQLM V+    AGSS STSGAKKPRLI SQTT  
Sbjct: 242 TCCKSRGFDCATHVKSTWVPAARRRERQLM-VSVTPGAGSSGSTSGAKKPRLITSQTTTT 301

Query: 241 SRTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVV 300
           S TSTSNTTPPRS DTSSSHQDA F EALPGQVRAPAVFKCVRVTAVDDG+DEYAYQAVV
Sbjct: 302 SHTSTSNTTPPRSFDTSSSHQDASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVV 361

Query: 301 KIGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNN--RNGISSSPLVDPSDVYNA 360
           KIGGH+FKGFLYDQG+E  D FPN+SELHLG G G       RNG +SSP++DP D+Y  
Sbjct: 362 KIGGHVFKGFLYDQGLETRDGFPNISELHLGGGSGSGGGGGARNGGTSSPILDPPDIY-- 421

Query: 361 AATGGGAPCFLGGSNYGNQIS 363
           AA+GGG    LGGS+YGN I+
Sbjct: 422 AASGGG---LLGGSSYGNAIN 422

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g04760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LRP1_ARATH6.8e-8154.97Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1[more]
SRS2_ARATH5.1e-3641.49Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1[more]
SRS7_ARATH5.6e-3541.74Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=SRS7 PE=2 SV=1[more]
SRS5_ARATH1.3e-3440.68Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=SRS5 PE=2 SV=1[more]
SRS1_ARATH3.1e-3347.88Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2[more]
BLAST of Cp4.1LG05g04760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF01_CUCSA1.0e-15582.80Uncharacterized protein OS=Cucumis sativus GN=Csa_6G432270 PE=4 SV=1[more]
W9RQF7_9ROSA1.7e-11865.14Uncharacterized protein OS=Morus notabilis GN=L484_001078 PE=4 SV=1[more]
A0A061GZE9_THECC6.3e-11867.29Lateral root primordium protein-related isoform 3 (Fragment) OS=Theobroma cacao ... [more]
A0A061GUQ3_THECC6.3e-11867.29Lateral root primordium protein-related isoform 1 OS=Theobroma cacao GN=TCM_0409... [more]
A5BRG1_VITVI2.0e-11665.96Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_006086 P... [more]
BLAST of Cp4.1LG05g04760 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G12330.41.2e-8354.49 Lateral root primordium (LRP) protein-related[more]
AT4G36260.12.9e-3741.49 Lateral root primordium (LRP) protein-related[more]
AT1G19790.13.2e-3641.74 SHI-related sequence 7[more]
AT1G75520.17.1e-3640.68 SHI-related sequence 5[more]
AT3G51060.11.7e-3447.88 Lateral root primordium (LRP) protein-related[more]
BLAST of Cp4.1LG05g04760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097495|ref|XP_008449658.1|1.1e-15883.60PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo][more]
gi|659097499|ref|XP_008449660.1|2.2e-15683.42PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo][more]
gi|659097497|ref|XP_008449659.1|8.4e-15683.38PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo][more]
gi|778716930|ref|XP_011657617.1|1.4e-15582.80PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus][more]
gi|731393526|ref|XP_010651514.1|1.4e-11865.88PREDICTED: protein LATERAL ROOT PRIMORDIUM 1, partial [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007818SHI
IPR006511SHI_C
IPR006510Znf_LRP1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g04760.1Cp4.1LG05g04760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMsTIGR01623TIGR01623coord: 147..189
score: 5.6
IPR006511Lateral Root Primordium type 1, C-terminalTIGRFAMsTIGR01624TIGR01624coord: 252..299
score: 4.5
IPR007818Protein of unknown function DUF702PFAMPF05142DUF702coord: 145..300
score: 1.5
NoneNo IPR availablePANTHERPTHR31604FAMILY NOT NAMEDcoord: 22..361
score: 5.7E
NoneNo IPR availablePANTHERPTHR31604:SF2PROTEIN SHI RELATED SEQUENCE 6coord: 22..361
score: 5.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g04760Cucsa.087040Cucumber (Gy14) v1cgycpeB0161
Cp4.1LG05g04760CmaCh20G001080Cucurbita maxima (Rimu)cmacpeB586
Cp4.1LG05g04760CmaCh02G012730Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g04760CmoCh20G001160Cucurbita moschata (Rifu)cmocpeB535
Cp4.1LG05g04760CmoCh02G013150Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g04760CmoCh11G008930Cucurbita moschata (Rifu)cmocpeB134
Cp4.1LG05g04760Cla008574Watermelon (97103) v1cpewmB723
Cp4.1LG05g04760Csa6G432270Cucumber (Chinese Long) v2cpecuB742
Cp4.1LG05g04760MELO3C014564Melon (DHL92) v3.5.1cpemeB696
Cp4.1LG05g04760ClCG02G022900Watermelon (Charleston Gray)cpewcgB644
Cp4.1LG05g04760CSPI06G23890Wild cucumber (PI 183967)cpecpiB744
Cp4.1LG05g04760Lsi10G010870Bottle gourd (USVL1VR-Ls)cpelsiB598
Cp4.1LG05g04760MELO3C014564.2Melon (DHL92) v3.6.1cpemedB829
Cp4.1LG05g04760CsaV3_6G039030Cucumber (Chinese Long) v3cpecucB0921
Cp4.1LG05g04760CsaV3_1G043360Cucumber (Chinese Long) v3cpecucB0877
Cp4.1LG05g04760Bhi10G000200Wax gourdcpewgoB0944
Cp4.1LG05g04760CsGy6G023240Cucumber (Gy14) v2cgybcpeB845
Cp4.1LG05g04760CsGy1G030220Cucumber (Gy14) v2cgybcpeB137
Cp4.1LG05g04760Carg02690Silver-seed gourdcarcpeB1283
Cp4.1LG05g04760Carg06880Silver-seed gourdcarcpeB0741
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g04760Cp4.1LG16g08610Cucurbita pepo (Zucchini)cpecpeB310
Cp4.1LG05g04760Cp4.1LG04g12290Cucurbita pepo (Zucchini)cpecpeB493
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g04760Cucurbita pepo (Zucchini)cpecpeB369
Cp4.1LG05g04760Cucurbita maxima (Rimu)cmacpeB098
Cp4.1LG05g04760Cucurbita maxima (Rimu)cmacpeB158
Cp4.1LG05g04760Cucurbita moschata (Rifu)cmocpeB074