Cp4.1LG15g07990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g07990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG15 : 8046844 .. 8047155 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTATGAAGAAAACAGGGCTGTTCGCCGCCTCCGTCGCCGCTGCCTCCGCCACCGCCCTCTCTGCTCCGTCGTCCTCCACCGGCGTCCTCAAAACCACCTTTTCCCATCAGGTAAAATACCCAAATTCTCATTTCAATTCAAAGTTCATCTGAAAACAAAATTCTTGGGAATTTCAGGAAAAGGTCATCAGCAGAGATGAAGAAACTAGTCCGTCGAGAATATCGCCGCCGTCGACGGCGGCGGATCAATTCGCTCCGAGATTCGATGGGCTGCGATTCATTGAAACTCTGGTCACTGCTCATAGATGA

mRNA sequence

ATGCCTATGAAGAAAACAGGGCTGTTCGCCGCCTCCGTCGCCGCTGCCTCCGCCACCGCCCTCTCTGCTCCGTCGTCCTCCACCGGCGTCCTCAAAACCACCTTTTCCCATCAGGAAAAGGTCATCAGCAGAGATGAAGAAACTAGTCCGTCGAGAATATCGCCGCCGTCGACGGCGGCGGATCAATTCGCTCCGAGATTCGATGGGCTGCGATTCATTGAAACTCTGGTCACTGCTCATAGATGA

Coding sequence (CDS)

ATGCCTATGAAGAAAACAGGGCTGTTCGCCGCCTCCGTCGCCGCTGCCTCCGCCACCGCCCTCTCTGCTCCGTCGTCCTCCACCGGCGTCCTCAAAACCACCTTTTCCCATCAGGAAAAGGTCATCAGCAGAGATGAAGAAACTAGTCCGTCGAGAATATCGCCGCCGTCGACGGCGGCGGATCAATTCGCTCCGAGATTCGATGGGCTGCGATTCATTGAAACTCTGGTCACTGCTCATAGATGA

Protein sequence

MPMKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPSTAADQFAPRFDGLRFIETLVTAHR
Homology
[Close]
BLAST of Cp4.1LG15g07990 vs. TrEMBL
Match: A0A0A0K2C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047970 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-24
Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPSTAADQ 62
          MKKTGLFAASVAAASATALSAP +S G+LKT FS QEKV   +E T+P+R SPPSTAADQ
Sbjct: 1  MKKTGLFAASVAAASATALSAPPASPGLLKTNFSRQEKVTRDEESTTPARRSPPSTAADQ 60

Query: 63 FAPRFDGLRFIETLVTAHR 82
          FAPRFDGLRFIETLVTAHR
Sbjct: 61 FAPRFDGLRFIETLVTAHR 79

[Close]
BLAST of Cp4.1LG15g07990 vs. TrEMBL
Match: E0CTD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03790 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.6e-13
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVL---KTTFSHQEKVISRDEETSPSRISPPSTA 62
          MKK+G FAASVAAASATA+SAPSSS G L   K   S  E V  +D E S S+    S++
Sbjct: 1  MKKSGFFAASVAAASATAISAPSSS-GFLCNSKIQLSRDEAVAGKDIENSESQ---RSSS 60

Query: 63 ADQFAPRFDGLRFIETLVTAHR 82
          AD+FAPRFDGLRFIETLVTAHR
Sbjct: 61 ADRFAPRFDGLRFIETLVTAHR 78

[Close]
BLAST of Cp4.1LG15g07990 vs. TrEMBL
Match: A0A067JMU1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25790 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-11
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPSTAADQ 62
          MKK+G+FAASVAAASATA+SA S S+    ++FS   K+    EE   S+    S++ ++
Sbjct: 1  MKKSGIFAASVAAASATAVSASSPSSN---SSFSFSSKMQLSHEEARSSKDQERSSSTEK 60

Query: 63 FAPRFDGLRFIETLVTAHR 82
          FAPRFDGL+FIETLVTAHR
Sbjct: 61 FAPRFDGLKFIETLVTAHR 76

[Close]
BLAST of Cp4.1LG15g07990 vs. TrEMBL
Match: V4UE88_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017361mg PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 9.8e-11
Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTF--SHQEKVISRDEETSPSRISPPSTAA 62
          MKK GLFAASVAAASATA+S  S++     + F  SH++    +D E S  R    S++ 
Sbjct: 1  MKKCGLFAASVAAASATAISDSSTTNLACNSNFQASHEDVSSKKDHENSTKR----SSST 60

Query: 63 DQFAPRFDGLRFIETLVTAHR 82
          ++FAPRFDGLRFIETLVTAHR
Sbjct: 61 EKFAPRFDGLRFIETLVTAHR 77

[Close]
BLAST of Cp4.1LG15g07990 vs. TrEMBL
Match: A0A059DGL2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01816 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-10
Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 1 

Query: 3   MKKTGLFAASVAAASATALSAPSSSTG---VLKTTFSHQEKVISRDEETSPSRISPPSTA 62
           MKK+GLFA S AAASATA+++ SSS       K  F +QE V S ++  S    S  S +
Sbjct: 51  MKKSGLFAVSAAAASATAIASSSSSLNFSCTSKLQFPNQEHVSSTEQAAS----SQNSGS 110

Query: 63  ADQFAPRFDGLRFIETLVTAHR 82
           AD+FAPRFDGLRFIETLVTAHR
Sbjct: 111 ADKFAPRFDGLRFIETLVTAHR 128

[Close]
BLAST of Cp4.1LG15g07990 vs. TAIR10
Match: AT4G28290.1 (AT4G28290.1 unknown protein)

HSP 1 Score: 67.4 bits (163), Expect = 4.6e-12
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1 

Query: 3  MKKTGLFAASVA-AASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPST--- 62
          MKKTG+ AAS++ AASATA+SA S++T V   +FS  E  +SR E     R    S+   
Sbjct: 1  MKKTGIIAASISVAASATAISAGSTNTSV---SFSSPESNLSRQEAKEKQRKKKGSSEDG 60

Query: 63 AADQFAPRFDGLRFIETLVTAHR 82
            ++FAPRFDGLRFIETLVTAHR
Sbjct: 61 GDEKFAPRFDGLRFIETLVTAHR 80

[Close]
BLAST of Cp4.1LG15g07990 vs. NCBI nr
Match: gi|659110624|ref|XP_008455325.1| (PREDICTED: uncharacterized protein LOC103495516 [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 6.9e-26
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEE-TSPSRISPPSTAAD 62
          MKKTGLFAASVAAASATALSAP SS   LKT FSHQEKVI+RDEE T+P+R SPPSTA+D
Sbjct: 1  MKKTGLFAASVAAASATALSAPPSSPSTLKTNFSHQEKVIARDEEITTPTRRSPPSTASD 60

Query: 63 QFAPRFDGLRFIETLVTAHR 82
          QFAPRFDGLRFIETLVTAHR
Sbjct: 61 QFAPRFDGLRFIETLVTAHR 80

[Close]
BLAST of Cp4.1LG15g07990 vs. NCBI nr
Match: gi|700188380|gb|KGN43613.1| (hypothetical protein Csa_7G047970 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-24
Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPSTAADQ 62
          MKKTGLFAASVAAASATALSAP +S G+LKT FS QEKV   +E T+P+R SPPSTAADQ
Sbjct: 1  MKKTGLFAASVAAASATALSAPPASPGLLKTNFSRQEKVTRDEESTTPARRSPPSTAADQ 60

Query: 63 FAPRFDGLRFIETLVTAHR 82
          FAPRFDGLRFIETLVTAHR
Sbjct: 61 FAPRFDGLRFIETLVTAHR 79

[Close]
BLAST of Cp4.1LG15g07990 vs. NCBI nr
Match: gi|225446347|ref|XP_002272559.1| (PREDICTED: uncharacterized protein LOC100262522 [Vitis vinifera])

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-13
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVL---KTTFSHQEKVISRDEETSPSRISPPSTA 62
          MKK+G FAASVAAASATA+SAPSSS G L   K   S  E V  +D E S S+    S++
Sbjct: 1  MKKSGFFAASVAAASATAISAPSSS-GFLCNSKIQLSRDEAVAGKDIENSESQ---RSSS 60

Query: 63 ADQFAPRFDGLRFIETLVTAHR 82
          AD+FAPRFDGLRFIETLVTAHR
Sbjct: 61 ADRFAPRFDGLRFIETLVTAHR 78

[Close]
BLAST of Cp4.1LG15g07990 vs. NCBI nr
Match: gi|694428850|ref|XP_009341971.1| (PREDICTED: uncharacterized protein LOC103933998 [Pyrus x bretschneideri])

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-11
Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTT---FSHQEKVISRDEETSPSRISPPSTA 62
          MKK G  AASVAAASATALSA SSS+  +  +   FSHQE  + R++E S       S +
Sbjct: 1  MKKPGFLAASVAAASATALSATSSSSSFVSDSTMRFSHQEAGVKRNQEKS-------SAS 60

Query: 63 ADQFAPRFDGLRFIETLVTAHR 82
           ++FAP+FDGLRFIETLVTAHR
Sbjct: 61 TEKFAPKFDGLRFIETLVTAHR 75

[Close]
BLAST of Cp4.1LG15g07990 vs. NCBI nr
Match: gi|802752590|ref|XP_012088290.1| (PREDICTED: uncharacterized protein LOC105646941 [Jatropha curcas])

HSP 1 Score: 75.1 bits (183), Expect = 6.3e-11
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1 

Query: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPSTAADQ 62
          MKK+G+FAASVAAASATA+SA S S+    ++FS   K+    EE   S+    S++ ++
Sbjct: 1  MKKSGIFAASVAAASATAVSASSPSSN---SSFSFSSKMQLSHEEARSSKDQERSSSTEK 60

Query: 63 FAPRFDGLRFIETLVTAHR 82
          FAPRFDGL+FIETLVTAHR
Sbjct: 61 FAPRFDGLKFIETLVTAHR 76

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g07990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG15g07990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2C1_CUCSA1.2e-2482.28Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047970 PE=4 SV=1[more]
E0CTD2_VITVI3.6e-1365.85Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03790 PE=4 SV=... [more]
A0A067JMU1_JATCU4.4e-1156.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25790 PE=4 SV=1[more]
V4UE88_9ROSI9.8e-1156.79Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017361mg PE=4 SV=1[more]
A0A059DGL2_EUCGR1.3e-1058.54Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01816 PE=4 SV=1[more]
BLAST of Cp4.1LG15g07990 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28290.14.6e-1255.42 unknown protein[more]
BLAST of Cp4.1LG15g07990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110624|ref|XP_008455325.1|6.9e-2686.25PREDICTED: uncharacterized protein LOC103495516 [Cucumis melo][more]
gi|700188380|gb|KGN43613.1|1.7e-2482.28hypothetical protein Csa_7G047970 [Cucumis sativus][more]
gi|225446347|ref|XP_002272559.1|5.2e-1365.85PREDICTED: uncharacterized protein LOC100262522 [Vitis vinifera][more]
gi|694428850|ref|XP_009341971.1|1.7e-1158.54PREDICTED: uncharacterized protein LOC103933998 [Pyrus x bretschneideri][more]
gi|802752590|ref|XP_012088290.1|6.3e-1156.96PREDICTED: uncharacterized protein LOC105646941 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g07990.1Cp4.1LG15g07990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34683FAMILY NOT NAMEDcoord: 3..81
score: 5.6
NoneNo IPR availablePANTHERPTHR34683:SF2SUBFAMILY NOT NAMEDcoord: 3..81
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g07990CmaCh11G018760Cucurbita maxima (Rimu)cmacpeB115
Cp4.1LG15g07990CmoCh11G019530Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g07990CmoCh19G010210Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g07990Cla002275Watermelon (97103) v1cpewmB259
Cp4.1LG15g07990Csa7G047970Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g07990MELO3C018738Melon (DHL92) v3.5.1cpemeB223
Cp4.1LG15g07990ClCG07G002930Watermelon (Charleston Gray)cpewcgB244
Cp4.1LG15g07990CSPI07G04610Wild cucumber (PI 183967)cpecpiB257
Cp4.1LG15g07990Lsi11G015500Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g07990MELO3C018738.2Melon (DHL92) v3.6.1cpemedB261
Cp4.1LG15g07990CsaV3_7G004410Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g07990Bhi05G001617Wax gourdcpewgoB0318
Cp4.1LG15g07990CsGy7G004200Cucumber (Gy14) v2cgybcpeB910
Cp4.1LG15g07990Carg19235Silver-seed gourdcarcpeB1220
Cp4.1LG15g07990Carg19121Silver-seed gourdcarcpeB1013
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g07990Bottle gourd (USVL1VR-Ls)cpelsiB196
Cp4.1LG15g07990Watermelon (Charleston Gray)cpewcgB230
Cp4.1LG15g07990Watermelon (97103) v1cpewmB265
Cp4.1LG15g07990Silver-seed gourdcarcpeB0578
Cp4.1LG15g07990Wax gourdcpewgoB0339
Cp4.1LG15g07990Cucurbita pepo (Zucchini)cpecpeB256
Cp4.1LG15g07990Cucurbita pepo (Zucchini)cpecpeB267
Cp4.1LG15g07990Cucumber (Gy14) v1cgycpeB0392
Cp4.1LG15g07990Cucurbita maxima (Rimu)cmacpeB222
Cp4.1LG15g07990Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g07990Cucurbita maxima (Rimu)cmacpeB558
Cp4.1LG15g07990Cucurbita moschata (Rifu)cmocpeB191
Cp4.1LG15g07990Cucurbita moschata (Rifu)cmocpeB387
Cp4.1LG15g07990Cucurbita moschata (Rifu)cmocpeB512