Cp4.1LG15g05600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g05600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA-binding protein HEXBP
LocationCp4.1LG15 : 6446392 .. 6449584 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGTTTGGTTTTCTCAATGCACTCTCGTTTTTATGATTTTCCGACGCATCGTGTTGCTTCTGCTTCTTTCTCTTCGGGATTACATGATGGAAGTGGTTTGTAAGTTACTGCGCTGTAGATTACATGATGAGATAATCTAGAGGTCCGTGAATTGTGTTTGTTTTTAGTTGTTGTTGTTGAGTAGTGAATGTTTTTGGTATAATTTCTCTCAACGAATATGAAATTTCTCTTCATGTGCCAACTGATCACGTCTGCAAAGATCTCGTGATTTGTGGCGGTTGTAGTTGTTGGATGATGAAAGTTCCACATCGACTAATTTAGGGGATGATCATGGGTTTATAATCAAAGAATACTCTCTCCATTGGAATGAGGCATTTTGGGGAAGTCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGTTCGTCTAACAGTAGTTATTTTTGCGTTAGCGTTGCTTAGTAGTTCGTGTGTTGGCTTTGCTTGTTTCTATTAGAAATTTCAACGGCTGCACAAATTGACTGTAGAACCTGTTCTGCAAAATTAGTAGTTAGTTAAAGAGCTGTTTCCAAAATGATCACTCGTGGTGGGATTACCAGTTGTAAACTGTGAAATTTTCAAAAATCATTGACAGAAATGACTTACTAGTTGTAATAGTGAAAGAAGTTGATGCAGCAATATGGAATGTGAATGTTAGTGGGCGTTGTTTGTGGATGGTCCACTACTGGATGAATTCTTAGCTTGGTGATGTGTTGGTAATGTTAACTTCAGCCATTCTTGAAATTGTATGAAGAATGTAGTTGAGGAATTGGATGTTGTGGGGATGTGGTGTTTGCTTTGTTGGGATTTTACTACTTTGTTGAATGGGATTGGAAATTGGTGTTTTCTATTTGAAGGGAAAAGAAAGAGTTTGGTTTGGATTCGTGGATATGAATTTGGTGTGTGGTTGTTATATGGGCAGGGAGGAGGCAGCATCGGTGTGATATTTTGGTGGTGGTGGTGGTGGTGGTGGTATTTTCACATATCAGTGGGAATAAGTATTGGAGAATAAGTTTGGAAATGAGTTCAGATAGCAGGAGTGGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCCCACTGGATCGTAAAATCCGGTCTGATCGTTTTTCACATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGGTTTCTGATTCTGATAAATTATGTACTTATCTCATATCTTATATGTAGGATGGGGAAGAATTTGCAGTTGTGTTTTAGAAATCCATCTTTGGCTGTGGACCTACCTTCCCCCGTCTTTTTTTGTGTACATTTCATTCGTTCATCAATTCGTATCTCGTTTCTTCCCAATACATACACAGATACCTATCACACACATGGTCATGGAGTCTGTTTTAAAGGAATTATGTAGCCATTGCATTATTGGGTTTGCATATTATGTGTTTGATGAACTCGACAAATCTCTGCATTTACCATGCTTGAGCAGACATGGGCTTCTCCTGCACCGCTGCAATCTATATAACATCCATGTTATACTGATTGTATGGTAATAGTATTTGATGTTTATGTTTCCGACTTTCGGACACGACCATGTATTAGTATGAAAAGTTGTTAATCTTAATCTGATTTTATTGCCAGTCGAGATAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCAAGATGTCGCAATTTGTCACAATTGTGGTCTCCCTGGGTAAGGAAACTTGATCTTATGCTTATTATCTTTGTCGCCTATTCGGATACGTATGCCTATTATCTTCGTCGCCTATTCGGATACAAATGTTTACTTGGGAGAATACTTATTTTTTTATGTACTTAAATATTCACCATTCTACTGGCATGCTATATTCCATTCTACTTGACATGAAAATTATGGATTTGGTTCCATTCTACTCGGTTTCACTAATCTTAATTTAGAATTTGAGATTTGAAGTTGACTCGAGGATATATTGTAAGATGCTATCAAGCAGGTTTTATGTGATTTAGGTCGGTGAGTGATTTTGAAATGGTTAAAATCACTTCAAAACATGGTTTTAATCATTCGCAATGAATTTTCTGACACGAAAATCACATTCGAAGGATTAAAAACATGTCTTTGAGTCTTAGAGTGATTTTATTCATTTCAATAGCACTCCTAAACATGGTCGAATCGGGTTATAATTGCATATTTGGCATACATTTGATTGAACAATGACCCCCTTTTACTTATCACTTGATCTACTAGGCATATTGCTTCCGAGTGCACGACAAAGTCGCTATGTTGGAACTGTCGAGAACCCGGTCACATGGCAAGTAGCTGCCCTAATGAAGGCATCTGCCACACCTGTGGCAAGGCAGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTCCCTCCTGGAGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAACGAGAAGGCGTGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAACGATCCTATTTGCAACTTGTGTAATGTATCAGGGCATGTCGCCAGACAGTGTCCGAAGTCCAACGTCCTCGGAGACCGAGTTGACCGAGGCAGTGGCGGTGGCAGTGTGCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGTAGGAAATGCCAGCAGCTTGGCCATATGAGTAGGGATTGCATGGGCCCTTTGATGATATGCCATAACTGCGGGGGACGAGGTCACCTGGCATACGAATGCCCTTCTGGTCGGTTTATGGACCGTTATCCCCGGAGGTACTGATGATCAAAAGAGATAAAATCACGTCCTCGACGAGGTTAGACCTTCAGATTTTGCTTGGAGTTTAGATAACCTGAGAACTAAACTTTATAGATTGCTCTACTCGGTTGCATTGTAGTATTTGCTCGTGCTATTATTACGAAACATTGCTATGCGGTTTAGACGATGTATTTTCGCTTTTCGGTATCATTGATCTTGGTTCTATGGTTCTAAATGATAAATATTTAAGAAATATAGTATTTTATGCTATAAATTCAATTTATTTGTCTTAAACTTAAAAAATATGTAATACAATGTATTATAAATTATATGATGGTGTAAAGTAAT

mRNA sequence

ATGAAAAGGAGGAGGCAGCATCGGTGTGATATTTTGGTGGTGGTGGTGGTGGTGGTGGTATTTTCACATATCAGTGGGAATAAGTATTGGAGAATAAGTTTGGAAATGAGTTCAGATAGCAGGAGTGGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCCCACTGGATCGTAAAATCCGGTCTGATCGTTTTTCACATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCGAGATAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCAAGATGTCGCAATTTGTCACAATTGTGGTCTCCCTGGGCATATTGCTTCCGAGTGCACGACAAAGTCGCTATGTTGGAACTGTCGAGAACCCGGTCACATGGCAAGTAGCTGCCCTAATGAAGGCATCTGCCACACCTGTGGCAAGGCAGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTCCCTCCTGGAGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAACGAGAAGGCGTGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAACGATCCTATTTGCAACTTGTGTAATGTATCAGGGCATGTCGCCAGACAGTGTCCGAAGTCCAACGTCCTCGGAGACCGAGTTGACCGAGGCAGTGGCGGTGGCAGTGTGCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGTAGGAAATGCCAGCAGCTTGGCCATATGAGTAGGGATTGCATGGGCCCTTTGATGATATGCCATAACTGCGGGGGACGAGGTCACCTGGCATACGAATGCCCTTCTGGTCGGTTTATGGACCGTTATCCCCGGAGGTACTGATGATCAAAAGAGATAAAATCACGTCCTCGACGAGGTTAGACCTTCAGATTTTGCTTGGAGTTTAGATAACCTGAGAACTAAACTTTATAGATTGCTCTACTCGGTTGCATTGTAGTATTTGCTCGTGCTATTATTACGAAACATTGCTATGCGGTTTAGACGATGTATTTTCGCTTTTCGGTATCATTGATCTTGGTTCTATGGTTCTAAATGATAAATATTTAAGAAATATAGTATTTTATGCTATAAATTCAATTTATTTGTCTTAAACTTAAAAAATATGTAATACAATGTATTATAAATTATATGATGGTGTAAAGTAAT

Coding sequence (CDS)

ATGAAAAGGAGGAGGCAGCATCGGTGTGATATTTTGGTGGTGGTGGTGGTGGTGGTGGTATTTTCACATATCAGTGGGAATAAGTATTGGAGAATAAGTTTGGAAATGAGTTCAGATAGCAGGAGTGGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCCCACTGGATCGTAAAATCCGGTCTGATCGTTTTTCACATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCGAGATAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCAAGATGTCGCAATTTGTCACAATTGTGGTCTCCCTGGGCATATTGCTTCCGAGTGCACGACAAAGTCGCTATGTTGGAACTGTCGAGAACCCGGTCACATGGCAAGTAGCTGCCCTAATGAAGGCATCTGCCACACCTGTGGCAAGGCAGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTCCCTCCTGGAGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAACGAGAAGGCGTGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAACGATCCTATTTGCAACTTGTGTAATGTATCAGGGCATGTCGCCAGACAGTGTCCGAAGTCCAACGTCCTCGGAGACCGAGTTGACCGAGGCAGTGGCGGTGGCAGTGTGCGTGGTGGTGCTGGTGGTTACCGGGATGTTGTGTGTAGGAAATGCCAGCAGCTTGGCCATATGAGTAGGGATTGCATGGGCCCTTTGATGATATGCCATAACTGCGGGGGACGAGGTCACCTGGCATACGAATGCCCTTCTGGTCGGTTTATGGACCGTTATCCCCGGAGGTACTGA

Protein sequence

MKRRRQHRCDILVVVVVVVVFSHISGNKYWRISLEMSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHFARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRVDRGSGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY
Homology
[Close]
BLAST of Cp4.1LG15g05600 vs. Swiss-Prot
Match: GIS2_YEAST (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIS2 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.3e-25
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 1 

Query: 86  CKNCKRPGHFARECQDVAICHNCGLPGHIASECTTKSL-----CWNCREPGHMASSCPNE 145
           C  C + GH A +C    +C+NC  PGH+ ++CT         C+NC E GH+ S C  +
Sbjct: 6   CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65

Query: 146 GICHTCGKAGHRARECTAPPLPPGDLRL-CNNCYKQGHIAADCTNEKA-----CNNCRKT 205
             C  C + GH +REC  P       ++ C  C    H+A DC  E       C  C + 
Sbjct: 66  R-CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQA 125

Query: 206 GHLARDCPNDPICNLCNVSGHVARQCPKS 224
           GH++RDC ND +C  CN +GH+++ CPK+
Sbjct: 126 GHMSRDCQNDRLCYNCNETGHISKDCPKA 153

[Close]
BLAST of Cp4.1LG15g05600 vs. Swiss-Prot
Match: BYR3_SCHPO (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=byr3 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-19
Identity = 64/198 (32.32%), Postives = 82/198 (41.41%), Query Frame = 1 

Query: 86  CKNCKRPGHFARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHT 145
           C NC   GH AREC   +IC+NC   GH ASECT         EP         E  C+ 
Sbjct: 19  CYNCGENGHQARECTKGSICYNCNQTGHKASECT---------EP-------QQEKTCYA 78

Query: 146 CGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADC-TNEKA-------------CNNC 205
           CG AGH  R+C + P P      C  C + GHIA DC TN +              C  C
Sbjct: 79  CGTAGHLVRDCPSSPNPRQGAE-CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYAC 138

Query: 206 RKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRVDRGSGGGSVRGGAGGYRDVVC 265
              GH ARDC     C  C   GH + +C +++                         +C
Sbjct: 139 GSYGHQARDCTMGVKCYSCGKIGHRSFECQQAS----------------------DGQLC 177

Query: 266 RKCQQLGHMSRDCMGPLM 270
            KC Q GH++ +C  P++
Sbjct: 199 YKCNQPGHIAVNCTSPVI 177

[Close]
BLAST of Cp4.1LG15g05600 vs. Swiss-Prot
Match: Y3800_DROME (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster GN=CG3800 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.6e-14
Identity = 58/202 (28.71%), Postives = 79/202 (39.11%), Query Frame = 1 

Query: 86  CKNCKRPGHFARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHT 145
           C  C RPGHFAR+C         G PG +                          G+   
Sbjct: 7   CYKCNRPGHFARDCS----LGGGGGPGGVGG-----------------GGGGGGGGMRGN 66

Query: 146 CGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNE-KACNNCRKTGHLARDCP-- 205
            G    R RE             C  C + GH A  C  E + C  C   GH+++DC   
Sbjct: 67  DGGGMRRNRE------------KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQA 126

Query: 206 NDPICNLCNVSGHVARQCPKSNVLGDRVDRGSGGGSVRGGAGGYRDVVCRKCQQLGHMSR 265
           ++P C  CN +GH  R CP++  + +R               G  +V C KC + GH+S+
Sbjct: 127 DNPTCYRCNKTGHWVRNCPEA--VNER---------------GPTNVSCYKCNRTGHISK 158

Query: 266 DCMGPLMICHNCGGRGHLAYEC 285
           +C      C+ CG  GHL  EC
Sbjct: 187 NCPETSKTCYGCGKSGHLRREC 158

[Close]
BLAST of Cp4.1LG15g05600 vs. Swiss-Prot
Match: ZCH13_HUMAN (Zinc finger CCHC domain-containing protein 13 OS=Homo sapiens GN=ZCCHC13 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 37/103 (35.92%), Postives = 51/103 (49.51%), Query Frame = 1 

Query: 105 CHNCGLPGHIASECTTK-SLCWNCREPGHMASSCPN-----EGICHTCGKAGHRARECTA 164
           C+ CG  G  A  C    ++C+NC   GH+A  C +        C+TCG+ GH AR+C  
Sbjct: 47  CYCCGESGRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDR 106

Query: 165 PPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC 202
                   + C +C K GHI  DC   K C  C + GH+A +C
Sbjct: 107 Q-----KEQKCYSCGKLGHIQKDCAQVK-CYRCGEIGHVAINC 143

[Close]
BLAST of Cp4.1LG15g05600 vs. Swiss-Prot
Match: AIR1_SCHPO (Protein air1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=air1 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-08
Identity = 39/141 (27.66%), Postives = 55/141 (39.01%), Query Frame = 1 

Query: 81  SRDNLCKNCKRPGHFARECQDVAICHNCG-LPGHIASECTTKSLCWNCREPGHMASSCP- 140
           S   +C NCK  GH +++C  V +C  CG +  HI+  C     C NC   GH+A+ C  
Sbjct: 86  SESIVCHNCKGNGHISKDCPHV-LCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSE 145

Query: 141 ----NEGICHTCGKAGHRARECT-----------APPLPPGDLR-LCNNCYKQGHIAADC 200
                  +C TC    H +  C               +   ++R  C NC    H   DC
Sbjct: 146 PRKRGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEVRKFCYNCASDEHFGDDC 205

Query: 201 TNEKACNNCRKTGHLARDCPN 204
           T     N    T     +CP+
Sbjct: 206 TLPSRSNYPESTAFCEANCPS 225

[Close]
BLAST of Cp4.1LG15g05600 vs. TrEMBL
Match: A0A0A0K138_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006230 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.2e-146
Identity = 246/264 (93.18%), Postives = 251/264 (95.08%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSPLDRKIRSDRFS+RDAPYRRESRRGFSRDNLCKNCKRPGHF
Sbjct: 1   MSSDSRS----RSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHF 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRAR+
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARD 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRG--SGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHN 275
           VARQCPKSNVLGDR DRG  SGGGS RG   GYRDVVCR CQQLGHMSRDCMGPLMICHN
Sbjct: 181 VARQCPKSNVLGDRGDRGISSGGGSGRGSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHN 240

Query: 276 CGGRGHLAYECPSGRFMDRYPRRY 298
           CGGRGHLAYECPSGRFMDR+PRRY
Sbjct: 241 CGGRGHLAYECPSGRFMDRFPRRY 260

[Close]
BLAST of Cp4.1LG15g05600 vs. TrEMBL
Match: K7KSE0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G008500 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.5e-144
Identity = 239/263 (90.87%), Postives = 249/263 (94.68%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+RDAPYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMASSCPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASSCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           C+APP+PPGDLRLCNNCYKQGHIAA+CTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CSAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRGSGGGSVR-GGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHNC 275
           VARQCPK+NVLGDR   G GGG  R GG GGYRDVVCR CQQLGHMSRDCMGPLMICHNC
Sbjct: 181 VARQCPKANVLGDRSGGGGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNC 240

Query: 276 GGRGHLAYECPSGRFMDRYPRRY 298
           GGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 GGRGHLAYECPSGRFMDRYPRRY 259

[Close]
BLAST of Cp4.1LG15g05600 vs. TrEMBL
Match: A0A0L9UHB1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g249800 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 4.7e-143
Identity = 236/263 (89.73%), Postives = 249/263 (94.68%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+RDAPYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMAS+CPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAA+CTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRGSGGGS-VRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHNC 275
           VARQCPK+NV+GDR   G GGG+   GG GGYRDV+CR CQQLGHMSRDCMGPLMICHNC
Sbjct: 181 VARQCPKANVIGDRSGGGGGGGARGGGGGGGYRDVICRNCQQLGHMSRDCMGPLMICHNC 240

Query: 276 GGRGHLAYECPSGRFMDRYPRRY 298
           GGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 GGRGHLAYECPSGRFMDRYPRRY 259

[Close]
BLAST of Cp4.1LG15g05600 vs. TrEMBL
Match: V7AQT1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G003600g PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.4e-142
Identity = 236/266 (88.72%), Postives = 249/266 (93.61%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+RDAPYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMAS+CPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAA+CTN+KACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAAECTNDKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRV----DRGSGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMIC 275
           VARQCPK+NVLGDR       G GGG+  GG GGYRDV+CR CQQLGHMSRDCMGPLMIC
Sbjct: 181 VARQCPKANVLGDRSGGGGGGGGGGGARGGGGGGYRDVICRNCQQLGHMSRDCMGPLMIC 240

Query: 276 HNCGGRGHLAYECPSGRFMDRYPRRY 298
           HNCGGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 HNCGGRGHLAYECPSGRFMDRYPRRY 262

[Close]
BLAST of Cp4.1LG15g05600 vs. TrEMBL
Match: A0A151TCZ7_CAJCA (DNA-binding protein HEXBP OS=Cajanus cajan GN=KK1_019542 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 2.3e-142
Identity = 236/264 (89.39%), Postives = 248/264 (93.94%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+R+APYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYREAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMAS+CPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAA+CTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRGSGGGSVRGGA--GGYRDVVCRKCQQLGHMSRDCMGPLMICHN 275
           VARQCPK+NVLGDR   G GGG   GGA  G YRDV+CR CQQLGHMSRDCMGPLMICHN
Sbjct: 181 VARQCPKANVLGDRSGGGGGGGGGGGGARGGSYRDVICRNCQQLGHMSRDCMGPLMICHN 240

Query: 276 CGGRGHLAYECPSGRFMDRYPRRY 298
           CGGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 CGGRGHLAYECPSGRFMDRYPRRY 260

[Close]
BLAST of Cp4.1LG15g05600 vs. TAIR10
Match: AT1G75560.1 (AT1G75560.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 346.3 bits (887), Expect = 1.9e-95
Identity = 172/271 (63.47%), Postives = 202/271 (74.54%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSR----SRSPLDRKIRSDRFSHRDAPYRRES--RRGFSRDNLCKNC 95
           MSS SRS SRSRSRSR    SRSP DR++RS+R S+ DAP RRE   RR FS+ NLC NC
Sbjct: 1   MSSMSRSRSRSRSRSRDRFRSRSPRDRRMRSERVSYHDAPSRREREPRRAFSQGNLCNNC 60

Query: 96  KRPGHFARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKA 155
           KRPGHFAR+C +V++C+NCGLPGHIA+ECT +S CWNCREPGH+AS+C NEGICH+CGK+
Sbjct: 61  KRPGHFARDCSNVSVCNNCGLPGHIAAECTAESRCWNCREPGHVASNCSNEGICHSCGKS 120

Query: 156 GHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNL 215
           GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+
Sbjct: 121 GHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKACKNCRTSGHIARDCRNDPVCNI 180

Query: 216 CNVSGHVARQCPKSNV-LGDRVDRGSGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMG-- 275
           C++SGHVAR CPK +    DR  R   GG  RGG              L  MSRD  G  
Sbjct: 181 CSISGHVARHCPKGDSNYSDRGSRVRDGGMQRGG--------------LSRMSRDREGVS 240

Query: 276 PLMICHNCGGRGHLAYECPSGRFMDRYPRRY 298
            ++ICHNCGGRGH AYECPS R  DR  RRY
Sbjct: 241 AMIICHNCGGRGHRAYECPSARVADRGFRRY 257

[Close]
BLAST of Cp4.1LG15g05600 vs. TAIR10
Match: AT4G36020.1 (AT4G36020.1 cold shock domain protein 1)

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-21
Identity = 72/217 (33.18%), Postives = 93/217 (42.86%), Query Frame = 1 

Query: 86  CKNCKRPGHFAREC-------------QDVAICHNCGLPGHIASECTTKSLCWNCREPGH 145
           C NC   GH +++C             +    C+NCG  GH A +CT+     N  + G 
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAG---NGDQRG- 161

Query: 146 MASSCPNEGICHTCGKAGHRARECTAPPLPPGDLR--------LCNNCYKQGHIAADCTN 205
            A+   N+G C+TCG  GH AR+CT   +  GD R         C  C   GH A DCT 
Sbjct: 162 -ATKGGNDG-CYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQ 221

Query: 206 EKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLG 265
           + A             C +C   GH+ARDC         C  C  SGH+AR C +     
Sbjct: 222 KVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQ----- 281

[Close]
BLAST of Cp4.1LG15g05600 vs. TAIR10
Match: AT3G42860.1 (AT3G42860.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 68.6 bits (166), Expect = 7.6e-12
Identity = 44/129 (34.11%), Postives = 61/129 (47.29%), Query Frame = 1 

Query: 86  CKNCKRPGHFAREC------------QDVAICHNCGLPGHIASECTTKSLCWNCR-EPGH 145
           C  C + GH+AR+C                 C  CG PGH + +CT +S   N + EPG 
Sbjct: 239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQS--GNPKYEPGQ 298

Query: 146 MASSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCR 202
           M SS  + G C+ CGK GH +R+CT         +  N  ++ G  A   ++   C  C 
Sbjct: 299 MKSS-SSSGECYKCGKQGHWSRDCTG--------QSSNQQFQSGQ-AKSTSSTGDCYKCG 355

[Close]
BLAST of Cp4.1LG15g05600 vs. TAIR10
Match: AT2G17870.1 (AT2G17870.1 cold shock domain protein 3)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 63/202 (31.19%), Postives = 78/202 (38.61%), Query Frame = 1 

Query: 86  CKNCKRPGHFARECQDVA------------ICHNCGLPGHIASECTTKSLCWNCREPGHM 145
           C  C   GHFAR+C+                C++CG  GH+A +C   S     R  G  
Sbjct: 132 CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGS--GGNRYGGGG 191

Query: 146 ASSCPNEGICHTCGKAGHRAREC--TAPPLPPGDLRLCNNCYKQGHIAADCTNE------ 205
                 +G C+ CG  GH AR+C         G    C  C   GHIA  CT++      
Sbjct: 192 GRGSGGDG-CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGG 251

Query: 206 ---KACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRVDRGSGGGSVRGG 265
              +AC  C  TGHLARDC                          DR  RGSG     GG
Sbjct: 252 GGGRACYECGGTGHLARDC--------------------------DR--RGSGSS---GG 297

[Close]
BLAST of Cp4.1LG15g05600 vs. TAIR10
Match: AT3G43590.1 (AT3G43590.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-10
Identity = 43/155 (27.74%), Postives = 59/155 (38.06%), Query Frame = 1 

Query: 143 CHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCP 202
           C++CG+ GH +  C   P P    + C  C    H A  C+    C  C+KTGH A+DCP
Sbjct: 168 CYSCGEQGHTSFNC---PTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCP 227

Query: 203 N-------DPICNLCNVSGHVARQCPKSNVLGDRVDRGSGGGSVRGGAGGYRDVVCRKCQ 262
           +         +C  C   GH    C       D                  +DV C  C+
Sbjct: 228 DKYKNGSKGAVCLRCGDFGHDMILCKYEYSKED-----------------LKDVQCYICK 287

Query: 263 QLGHMSRDCMGP------LMICHNCGGRGHLAYEC 285
             GH+   C+ P       + C+ CG  GH    C
Sbjct: 288 SFGHLC--CVEPGNSLSWAVSCYRCGQLGHSGLAC 300

[Close]
BLAST of Cp4.1LG15g05600 vs. NCBI nr
Match: gi|659094428|ref|XP_008448055.1| (PREDICTED: zinc finger protein GIS2 [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 3.4e-147
Identity = 248/264 (93.94%), Postives = 251/264 (95.08%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSPLDRKIRSDRFS+RDAPYRRESRRGFSRDNLCKNCKRPGHF
Sbjct: 1   MSSDSRS----RSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHF 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRAR+
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARD 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRG--SGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHN 275
           VARQCPKSNVLGDR DRG  SGGGS RG   GYRDVVCR CQQLGHMSRDCMGPLMICHN
Sbjct: 181 VARQCPKSNVLGDRGDRGISSGGGSGRGSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHN 240

Query: 276 CGGRGHLAYECPSGRFMDRYPRRY 298
           CGGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 CGGRGHLAYECPSGRFMDRYPRRY 260

[Close]
BLAST of Cp4.1LG15g05600 vs. NCBI nr
Match: gi|449461615|ref|XP_004148537.1| (PREDICTED: zinc finger protein GIS2 [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 1.7e-146
Identity = 246/264 (93.18%), Postives = 251/264 (95.08%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSPLDRKIRSDRFS+RDAPYRRESRRGFSRDNLCKNCKRPGHF
Sbjct: 1   MSSDSRS----RSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHF 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRAR+
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARD 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRG--SGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHN 275
           VARQCPKSNVLGDR DRG  SGGGS RG   GYRDVVCR CQQLGHMSRDCMGPLMICHN
Sbjct: 181 VARQCPKSNVLGDRGDRGISSGGGSGRGSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHN 240

Query: 276 CGGRGHLAYECPSGRFMDRYPRRY 298
           CGGRGHLAYECPSGRFMDR+PRRY
Sbjct: 241 CGGRGHLAYECPSGRFMDRFPRRY 260

[Close]
BLAST of Cp4.1LG15g05600 vs. NCBI nr
Match: gi|356516892|ref|XP_003527126.1| (PREDICTED: zinc finger protein GIS2-like [Glycine max])

HSP 1 Score: 519.6 bits (1337), Expect = 3.5e-144
Identity = 239/263 (90.87%), Postives = 249/263 (94.68%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+RDAPYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMASSCPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASSCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           C+APP+PPGDLRLCNNCYKQGHIAA+CTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CSAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRGSGGGSVR-GGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHNC 275
           VARQCPK+NVLGDR   G GGG  R GG GGYRDVVCR CQQLGHMSRDCMGPLMICHNC
Sbjct: 181 VARQCPKANVLGDRSGGGGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNC 240

Query: 276 GGRGHLAYECPSGRFMDRYPRRY 298
           GGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 GGRGHLAYECPSGRFMDRYPRRY 259

[Close]
BLAST of Cp4.1LG15g05600 vs. NCBI nr
Match: gi|950977305|ref|XP_014501462.1| (PREDICTED: zinc finger protein GIS2 [Vigna radiata var. radiata])

HSP 1 Score: 516.5 bits (1329), Expect = 3.0e-143
Identity = 236/262 (90.08%), Postives = 249/262 (95.04%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+RDAPYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMAS+CPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAA+CTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRGSGGGSVRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHNCG 275
           VARQCPK+NV+GDR   G GGG+  GG GGYRDV+CR CQQLGHMSRDCMGPLMICHNCG
Sbjct: 181 VARQCPKANVIGDR-SSGGGGGARGGGGGGYRDVICRNCQQLGHMSRDCMGPLMICHNCG 240

Query: 276 GRGHLAYECPSGRFMDRYPRRY 298
           GRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 GRGHLAYECPSGRFMDRYPRRY 257

[Close]
BLAST of Cp4.1LG15g05600 vs. NCBI nr
Match: gi|920699075|gb|KOM42300.1| (hypothetical protein LR48_Vigan04g249800 [Vigna angularis])

HSP 1 Score: 515.4 bits (1326), Expect = 6.7e-143
Identity = 236/263 (89.73%), Postives = 249/263 (94.68%), Query Frame = 1 

Query: 36  MSSDSRSGSRSRSRSRSRSPLDRKIRSDRFSHRDAPYRRESRRGFSRDNLCKNCKRPGHF 95
           MSSDSRS    RSRSRSRSP+DRKIRSDRFS+RDAPYRR+SRRGFSRDNLCKNCKRPGH+
Sbjct: 1   MSSDSRS----RSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHY 60

Query: 96  ARECQDVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARE 155
           AREC +VAICHNCGLPGHIASECTTKSLCWNC+EPGHMAS+CPNEGICHTCGKAGHRARE
Sbjct: 61  ARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARE 120

Query: 156 CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 215
           CTAPP+PPGDLRLCNNCYKQGHIAA+CTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH
Sbjct: 121 CTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGH 180

Query: 216 VARQCPKSNVLGDRVDRGSGGGS-VRGGAGGYRDVVCRKCQQLGHMSRDCMGPLMICHNC 275
           VARQCPK+NV+GDR   G GGG+   GG GGYRDV+CR CQQLGHMSRDCMGPLMICHNC
Sbjct: 181 VARQCPKANVIGDRSGGGGGGGARGGGGGGGYRDVICRNCQQLGHMSRDCMGPLMICHNC 240

Query: 276 GGRGHLAYECPSGRFMDRYPRRY 298
           GGRGHLAYECPSGRFMDRYPRRY
Sbjct: 241 GGRGHLAYECPSGRFMDRYPRRY 259

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g05600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GIS2_YEAST3.3e-2536.24Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c... [more]
BYR3_SCHPO2.7e-1932.32Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (stra... [more]
Y3800_DROME2.6e-1428.71CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster GN=CG3800 PE=1 S... [more]
ZCH13_HUMAN2.3e-1035.92Zinc finger CCHC domain-containing protein 13 OS=Homo sapiens GN=ZCCHC13 PE=1 SV... [more]
AIR1_SCHPO6.3e-0827.66Protein air1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=air1 PE=1... [more]
BLAST of Cp4.1LG15g05600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K138_CUCSA1.2e-14693.18Uncharacterized protein OS=Cucumis sativus GN=Csa_7G006230 PE=4 SV=1[more]
K7KSE0_SOYBN2.5e-14490.87Uncharacterized protein OS=Glycine max GN=GLYMA_06G008500 PE=4 SV=1[more]
A0A0L9UHB1_PHAAN4.7e-14389.73Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g249800 PE=4 SV=1[more]
V7AQT1_PHAVU1.4e-14288.72Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G003600g PE=4 SV=1[more]
A0A151TCZ7_CAJCA2.3e-14289.39DNA-binding protein HEXBP OS=Cajanus cajan GN=KK1_019542 PE=4 SV=1[more]
BLAST of Cp4.1LG15g05600 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75560.11.9e-9563.47 zinc knuckle (CCHC-type) family protein[more]
AT4G36020.15.3e-2133.18 cold shock domain protein 1[more]
AT3G42860.17.6e-1234.11 zinc knuckle (CCHC-type) family protein[more]
AT2G17870.11.3e-1131.19 cold shock domain protein 3[more]
AT3G43590.14.2e-1027.74 zinc knuckle (CCHC-type) family protein[more]
BLAST of Cp4.1LG15g05600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094428|ref|XP_008448055.1|3.4e-14793.94PREDICTED: zinc finger protein GIS2 [Cucumis melo][more]
gi|449461615|ref|XP_004148537.1|1.7e-14693.18PREDICTED: zinc finger protein GIS2 [Cucumis sativus][more]
gi|356516892|ref|XP_003527126.1|3.5e-14490.87PREDICTED: zinc finger protein GIS2-like [Glycine max][more]
gi|950977305|ref|XP_014501462.1|3.0e-14390.08PREDICTED: zinc finger protein GIS2 [Vigna radiata var. radiata][more]
gi|920699075|gb|KOM42300.1|6.7e-14389.73hypothetical protein LR48_Vigan04g249800 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g05600.1Cp4.1LG15g05600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 215..257
score: 3.2E-9coord: 113..140
score: 6.6E-13coord: 177..195
score: 1.6E-12coord: 258..286
score: 9.1E-11coord: 196..214
score: 1.5E-11coord: 86..112
score: 8.3E-10coord: 143..176
score: 4.4
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 206..222
score: 0.0018coord: 250..264
score: 2.5E-6coord: 105..119
score: 2.9E-5coord: 168..184
score: 0.0034coord: 142..157
score: 2.6E-5coord: 187..203
score: 3.2E-6coord: 270..286
score: 2.1E-5coord: 85..100
score: 3.4E-5coord: 124..139
score: 9.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 104..120
score: 0.0017coord: 123..139
score: 1.8E-4coord: 270..286
score: 0.001coord: 250..266
score: 0.0076coord: 206..222
score: 0.02coord: 85..101
score: 0.0083coord: 142..158
score: 0.0033coord: 168..184
score: 0.0078coord: 187..203
score: 1.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 124..139
score: 9.916coord: 188..203
score: 10.015coord: 251..264
score: 9.109coord: 207..222
score: 8.614coord: 271..286
score: 9.834coord: 169..184
score: 8.796coord: 86..101
score: 9.274coord: 143..156
score: 9.916coord: 105..118
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 242..288
score: 1.28E-11coord: 122..159
score: 7.56E-10coord: 185..224
score: 8.95E-10coord: 77..121
score: 1.6
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 10..291
score: 6.8E
NoneNo IPR availablePANTHERPTHR23002:SF65SUBFAMILY NOT NAMEDcoord: 10..291
score: 6.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g05600CmaCh11G010780Cucurbita maxima (Rimu)cmacpeB119
Cp4.1LG15g05600CmaCh19G006910Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g05600CmoCh19G007020Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g05600CmoCh11G010990Cucurbita moschata (Rifu)cmocpeB096
Cp4.1LG15g05600Cla015888Watermelon (97103) v1cpewmB268
Cp4.1LG15g05600Csa7G006230Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g05600MELO3C013423Melon (DHL92) v3.5.1cpemeB224
Cp4.1LG15g05600ClCG02G004610Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g05600CSPI07G00360Wild cucumber (PI 183967)cpecpiB259
Cp4.1LG15g05600MELO3C013423.2Melon (DHL92) v3.6.1cpemedB262
Cp4.1LG15g05600CsaV3_7G000350Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g05600CsGy7G000300Cucumber (Gy14) v2cgybcpeB910
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g05600Cp4.1LG04g01040Cucurbita pepo (Zucchini)cpecpeB270
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g05600Watermelon (97103) v1cpewmB250
Cp4.1LG15g05600Watermelon (97103) v1cpewmB270
Cp4.1LG15g05600Melon (DHL92) v3.5.1cpemeB210
Cp4.1LG15g05600Cucumber (Gy14) v2cgybcpeB185
Cp4.1LG15g05600Cucumber (Gy14) v2cgybcpeB189
Cp4.1LG15g05600Melon (DHL92) v3.6.1cpemedB253
Cp4.1LG15g05600Silver-seed gourdcarcpeB0436
Cp4.1LG15g05600Silver-seed gourdcarcpeB1357
Cp4.1LG15g05600Cucumber (Chinese Long) v3cpecucB0289
Cp4.1LG15g05600Wax gourdcpewgoB0326
Cp4.1LG15g05600Wax gourdcpewgoB0338
Cp4.1LG15g05600Cucurbita pepo (Zucchini)cpecpeB110
Cp4.1LG15g05600Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG15g05600Cucurbita pepo (Zucchini)cpecpeB274
Cp4.1LG15g05600Cucurbita pepo (Zucchini)cpecpeB283
Cp4.1LG15g05600Cucumber (Gy14) v1cgycpeB0245
Cp4.1LG15g05600Cucumber (Gy14) v1cgycpeB0992
Cp4.1LG15g05600Cucurbita maxima (Rimu)cmacpeB616
Cp4.1LG15g05600Cucurbita maxima (Rimu)cmacpeB772
Cp4.1LG15g05600Cucurbita moschata (Rifu)cmocpeB566
Cp4.1LG15g05600Cucurbita moschata (Rifu)cmocpeB727
Cp4.1LG15g05600Wild cucumber (PI 183967)cpecpiB236
Cp4.1LG15g05600Cucumber (Chinese Long) v2cpecuB232
Cp4.1LG15g05600Bottle gourd (USVL1VR-Ls)cpelsiB195
Cp4.1LG15g05600Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g05600Watermelon (Charleston Gray)cpewcgB229